Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
14:45:47 (27170): wrapper (7.7.26015): starting
14:45:47 (27170): wrapper: running run_atlas (--nthreads 12)
[2025-07-23 14:45:47] Arguments: --nthreads 12
[2025-07-23 14:45:47] Threads: 12
[2025-07-23 14:45:47] Checking for CVMFS
[2025-07-23 14:45:47] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-23 14:45:47] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-23 14:45:47] Running cvmfs_config stat atlas.cern.ch
[2025-07-23 14:45:47] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-23 14:45:47] 2.11.2.0 2924 106573 95952 148668 2 59 13624253 20275201 1 130560 0 35271119 99.969 10071825 11111 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-07-23 14:45:47] CVMFS is ok
[2025-07-23 14:45:47] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-07-23 14:45:47] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-07-23 14:45:47] Further information can be found at the LHC@home message board.
[2025-07-23 14:45:47] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-23 14:45:47] Checking for apptainer binary...
[2025-07-23 14:45:47] Using apptainer found in PATH at /usr/bin/apptainer
[2025-07-23 14:45:47] Running /usr/bin/apptainer --version
[2025-07-23 14:45:47] apptainer version 1.3.2-1.el7
[2025-07-23 14:45:47] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-23 14:45:49] c-205-28.aglt2.org
[2025-07-23 14:45:49] apptainer works
[2025-07-23 14:45:49] Set ATHENA_PROC_NUMBER=12
[2025-07-23 14:45:49] Set ATHENA_CORE_NUMBER=12
[2025-07-23 14:45:49] Starting ATLAS job with PandaID=6742301859
[2025-07-23 14:45:49] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-23 16:31:00]  *** The last 200 lines of the pilot log: ***
[2025-07-23 16:31:00] 2025-07-23 20:30:25,769 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-23 16:31:00] 2025-07-23 20:30:27,967 | INFO     | PID=30783 has CPU usage=6.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-07-23 16:31:00] 2025-07-23 20:30:28,085 | INFO     | CPU arch script returned: x86-64-v2
[2025-07-23 16:31:00] 2025-07-23 20:30:28,089 | INFO     | found 12 cores (6 cores per socket, 2 sockets) , CPU MHz: 1718.0
[2025-07-23 16:31:00] 2025-07-23 20:30:28,091 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6742301859/memory_monitor_summary.json (trf name=prmon)
[2025-07-23 16:31:00] 2025-07-23 20:30:28,092 | INFO     | extracted standard info from prmon json
[2025-07-23 16:31:00] 2025-07-23 20:30:28,092 | INFO     | extracted standard memory fields from prmon json
[2025-07-23 16:31:00] 2025-07-23 20:30:28,092 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-23 16:31:00] 2025-07-23 20:30:28,092 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-23 16:31:00] 2025-07-23 20:30:28,093 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-23 16:31:00] 2025-07-23 20:30:28,095 | INFO     | fitting pss+swap vs Time
[2025-07-23 16:31:00] 2025-07-23 20:30:28,095 | INFO     | sum of square deviations: 329031285.5
[2025-07-23 16:31:00] 2025-07-23 20:30:28,096 | INFO     | sum of deviations: 3767958166.0000033
[2025-07-23 16:31:00] 2025-07-23 20:30:28,096 | INFO     | mean x: 1753299473.5
[2025-07-23 16:31:00] 2025-07-23 20:30:28,096 | INFO     | mean y: 2763102.843137255
[2025-07-23 16:31:00] 2025-07-23 20:30:28,096 | INFO     | -- intersect: -20075446355.502827
[2025-07-23 16:31:00] 2025-07-23 20:30:28,096 | INFO     | intersect: -20075446355.502827
[2025-07-23 16:31:00] 2025-07-23 20:30:28,096 | INFO     | chi2: 1.5763963765760562
[2025-07-23 16:31:00] 2025-07-23 20:30:28,096 | INFO     | sum of square deviations: 282974608.0
[2025-07-23 16:31:00] 2025-07-23 20:30:28,097 | INFO     | sum of deviations: 3830532819.999999
[2025-07-23 16:31:00] 2025-07-23 20:30:28,097 | INFO     | mean x: 1753299321.0
[2025-07-23 16:31:00] 2025-07-23 20:30:28,097 | INFO     | mean y: 2763310.154639175
[2025-07-23 16:31:00] 2025-07-23 20:30:28,097 | INFO     | -- intersect: -23731064399.129486
[2025-07-23 16:31:00] 2025-07-23 20:30:28,097 | INFO     | intersect: -23731064399.129486
[2025-07-23 16:31:00] 2025-07-23 20:30:28,098 | INFO     | chi2: 1.5794610959250683
[2025-07-23 16:31:00] 2025-07-23 20:30:28,098 | INFO     | current chi2=1.5794610959250683 (change=-0.19441299120901825 %)
[2025-07-23 16:31:00] 2025-07-23 20:30:28,098 | INFO     | right removable region: 96
[2025-07-23 16:31:00] 2025-07-23 20:30:28,098 | INFO     | sum of square deviations: 282974608.0
[2025-07-23 16:31:00] 2025-07-23 20:30:28,098 | INFO     | sum of deviations: -13721346099.999998
[2025-07-23 16:31:00] 2025-07-23 20:30:28,099 | INFO     | mean x: 1753299626.0
[2025-07-23 16:31:00] 2025-07-23 20:30:28,099 | INFO     | mean y: 2819893.6597938146
[2025-07-23 16:31:00] 2025-07-23 20:30:28,099 | INFO     | -- intersect: 85019744752.67949
[2025-07-23 16:31:00] 2025-07-23 20:30:28,099 | INFO     | intersect: 85019744752.67949
[2025-07-23 16:31:00] 2025-07-23 20:30:28,099 | INFO     | chi2: 0.0819393233859963
[2025-07-23 16:31:00] 2025-07-23 20:30:28,099 | INFO     | current chi2=0.0819393233859963 (change=94.80211166407469 %)
[2025-07-23 16:31:00] 2025-07-23 20:30:28,099 | INFO     | sum of square deviations: 241429643.0
[2025-07-23 16:31:00] 2025-07-23 20:30:28,100 | INFO     | sum of deviations: -11442503952.0
[2025-07-23 16:31:00] 2025-07-23 20:30:28,100 | INFO     | mean x: 1753299778.5
[2025-07-23 16:31:00] 2025-07-23 20:30:28,100 | INFO     | mean y: 2811468.0434782607
[2025-07-23 16:31:00] 2025-07-23 20:30:28,100 | INFO     | -- intersect: 83100062473.4926
[2025-07-23 16:31:00] 2025-07-23 20:30:28,100 | INFO     | intersect: 83100062473.4926
[2025-07-23 16:31:00] 2025-07-23 20:30:28,100 | INFO     | chi2: 0.08081438376091507
[2025-07-23 16:31:00] 2025-07-23 20:30:28,101 | INFO     | current chi2=0.08081438376091507 (change=1.3728934760443532 %)
[2025-07-23 16:31:00] 2025-07-23 20:30:28,101 | INFO     | left removable region: 20
[2025-07-23 16:31:00] 2025-07-23 20:30:28,101 | INFO     | sum of square deviations: 136095575.0
[2025-07-23 16:31:00] 2025-07-23 20:30:28,101 | INFO     | sum of deviations: -4968329585.999998
[2025-07-23 16:31:00] 2025-07-23 20:30:28,101 | INFO     | mean x: 1753299900.5
[2025-07-23 16:31:00] 2025-07-23 20:30:28,101 | INFO     | mean y: 2787032.3157894737
[2025-07-23 16:31:00] 2025-07-23 20:30:28,102 | INFO     | -- intersect: 64009069152.693344
[2025-07-23 16:31:00] 2025-07-23 20:30:28,102 | INFO     | intersect: 64009069152.693344
[2025-07-23 16:31:00] 2025-07-23 20:30:28,102 | INFO     | chi2: 0.06066640315165795
[2025-07-23 16:31:00] 2025-07-23 20:30:28,102 | INFO     | -- intersect: 64009069152.693344
[2025-07-23 16:31:00] 2025-07-23 20:30:28,102 | INFO     | current memory leak: -36.51 B/s (using 76 data points, chi2=0.06)
[2025-07-23 16:31:00] 2025-07-23 20:30:28,102 | INFO     | could have reported an average CPU frequency of 2131 MHz (7 samples)
[2025-07-23 16:31:00] 2025-07-23 20:30:28,103 | INFO     | ..............................
[2025-07-23 16:31:00] 2025-07-23 20:30:28,103 | INFO     | . Timing measurements:
[2025-07-23 16:31:00] 2025-07-23 20:30:28,103 | INFO     | . get job = 0 s
[2025-07-23 16:31:00] 2025-07-23 20:30:28,103 | INFO     | . initial setup = 2 s
[2025-07-23 16:31:00] 2025-07-23 20:30:28,103 | INFO     | . payload setup = 9 s
[2025-07-23 16:31:00] 2025-07-23 20:30:28,103 | INFO     | . stage-in = 0 s
[2025-07-23 16:31:00] 2025-07-23 20:30:28,103 | INFO     | . payload execution = 6225 s
[2025-07-23 16:31:00] 2025-07-23 20:30:28,103 | INFO     | . stage-out = 0 s
[2025-07-23 16:31:00] 2025-07-23 20:30:28,103 | INFO     | . log creation = 0 s
[2025-07-23 16:31:00] 2025-07-23 20:30:28,104 | INFO     | ..............................
[2025-07-23 16:31:00] 2025-07-23 20:30:28,688 | INFO     | 
[2025-07-23 16:31:00] 2025-07-23 20:30:28,688 | INFO     | job summary report
[2025-07-23 16:31:00] 2025-07-23 20:30:28,688 | INFO     | --------------------------------------------------
[2025-07-23 16:31:00] 2025-07-23 20:30:28,688 | INFO     | PanDA job id: 6742301859
[2025-07-23 16:31:00] 2025-07-23 20:30:28,689 | INFO     | task id: 45697472
[2025-07-23 16:31:00] 2025-07-23 20:30:28,689 | INFO     | errors: (none)
[2025-07-23 16:31:00] 2025-07-23 20:30:28,689 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-23 16:31:00] 2025-07-23 20:30:28,689 | INFO     | pilot state: finished 
[2025-07-23 16:31:00] 2025-07-23 20:30:28,689 | INFO     | transexitcode: 0
[2025-07-23 16:31:00] 2025-07-23 20:30:28,689 | INFO     | exeerrorcode: 0
[2025-07-23 16:31:00] 2025-07-23 20:30:28,690 | INFO     | exeerrordiag: 
[2025-07-23 16:31:00] 2025-07-23 20:30:28,690 | INFO     | exitcode: 0
[2025-07-23 16:31:00] 2025-07-23 20:30:28,690 | INFO     | exitmsg: OK
[2025-07-23 16:31:00] 2025-07-23 20:30:28,690 | INFO     | cpuconsumptiontime: 70218 s
[2025-07-23 16:31:00] 2025-07-23 20:30:28,690 | INFO     | nevents: 400
[2025-07-23 16:31:00] 2025-07-23 20:30:28,690 | INFO     | neventsw: 0
[2025-07-23 16:31:00] 2025-07-23 20:30:28,691 | INFO     | pid: 5040
[2025-07-23 16:31:00] 2025-07-23 20:30:28,691 | INFO     | pgrp: 5040
[2025-07-23 16:31:00] 2025-07-23 20:30:28,691 | INFO     | corecount: 12
[2025-07-23 16:31:00] 2025-07-23 20:30:28,691 | INFO     | event service: False
[2025-07-23 16:31:00] 2025-07-23 20:30:28,691 | INFO     | sizes: {0: 2397534, 5: 2397796, 11: 2397852, 6239: 2424833, 6240: 2433831, 6242: 2433887, 6249: 2434209}
[2025-07-23 16:31:00] 2025-07-23 20:30:28,691 | INFO     | --------------------------------------------------
[2025-07-23 16:31:00] 2025-07-23 20:30:28,691 | INFO     | 
[2025-07-23 16:31:00] 2025-07-23 20:30:28,692 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-07-23 16:31:00] 2025-07-23 20:30:28,717 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-23 16:31:00] 2025-07-23 20:30:28,718 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-23 16:31:00] 2025-07-23 20:30:28,718 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-23 16:31:00] 2025-07-23 20:30:28,718 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-23 16:31:00] 2025-07-23 20:30:28,718 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-23 16:31:00] 2025-07-23 20:30:28,719 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-23 16:31:00] 2025-07-23 20:30:28,719 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-23 16:31:00] 2025-07-23 20:30:28,719 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-23 16:31:00] 2025-07-23 20:30:28,719 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-23 16:31:00] 2025-07-23 20:30:28,719 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-23 16:31:00] 2025-07-23 20:30:28,719 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-23 16:31:00] 2025-07-23 20:30:28,720 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-23 16:31:00] 2025-07-23 20:30:28,720 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-23 16:31:00] 2025-07-23 20:30:28,720 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-23 16:31:00] 2025-07-23 20:30:28,720 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-23 16:31:00] 2025-07-23 20:30:28,720 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-23 16:31:00] 2025-07-23 20:30:28,720 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-23 16:31:00] 2025-07-23 20:30:28,721 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-23 16:31:00] 2025-07-23 20:30:28,721 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-23 16:31:00] 2025-07-23 20:30:28,721 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-23 16:31:00] 2025-07-23 20:30:28,721 | INFO     | job 6742301859 has completed (purged errors)
[2025-07-23 16:31:00] 2025-07-23 20:30:28,721 | INFO     | overall cleanup function is called
[2025-07-23 16:31:00] 2025-07-23 20:30:29,729 | INFO     | --- collectZombieJob: --- 10, [5040]
[2025-07-23 16:31:00] 2025-07-23 20:30:29,729 | INFO     | zombie collector waiting for pid 5040
[2025-07-23 16:31:00] 2025-07-23 20:30:29,729 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-23 16:31:00] 2025-07-23 20:30:29,729 | INFO     | collected zombie processes
[2025-07-23 16:31:00] 2025-07-23 20:30:29,729 | INFO     | will attempt to kill all subprocesses of pid=5040
[2025-07-23 16:31:00] 2025-07-23 20:30:29,823 | INFO     | process IDs to be killed: [5040] (in reverse order)
[2025-07-23 16:31:00] 2025-07-23 20:30:29,874 | WARNING  | found no corresponding commands to process id(s)
[2025-07-23 16:31:00] 2025-07-23 20:30:29,874 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-23 16:31:00] 2025-07-23 20:30:29,878 | INFO     | did not find any defunct processes belonging to 5040
[2025-07-23 16:31:00] 2025-07-23 20:30:29,881 | INFO     | did not find any defunct processes belonging to 5040
[2025-07-23 16:31:00] 2025-07-23 20:30:29,881 | INFO     | ready for new job
[2025-07-23 16:31:00] 2025-07-23 20:30:29,881 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-23 16:31:00] 2025-07-23 20:30:29,883 | INFO     | ***************************************
[2025-07-23 16:31:00] 2025-07-23 20:30:29,883 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-23 16:31:00] 2025-07-23 20:30:29,883 | INFO     | ***************************************
[2025-07-23 16:31:00] 2025-07-23 20:30:29,883 | INFO     | 
[2025-07-23 16:31:00] 2025-07-23 20:30:29,884 | INFO     | architecture information:
[2025-07-23 16:31:00] 2025-07-23 20:30:29,884 | INFO     | executing command: cat /etc/os-release
[2025-07-23 16:31:00] 2025-07-23 20:30:29,899 | INFO     | cat /etc/os-release:
[2025-07-23 16:31:00] NAME="CentOS Linux"
[2025-07-23 16:31:00] VERSION="7 (Core)"
[2025-07-23 16:31:00] ID="centos"
[2025-07-23 16:31:00] ID_LIKE="rhel fedora"
[2025-07-23 16:31:00] VERSION_ID="7"
[2025-07-23 16:31:00] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-23 16:31:00] ANSI_COLOR="0;31"
[2025-07-23 16:31:00] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-23 16:31:00] HOME_URL="https://www.centos.org/"
[2025-07-23 16:31:00] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-23 16:31:00] 
[2025-07-23 16:31:00] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-23 16:31:00] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-23 16:31:00] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-23 16:31:00] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-23 16:31:00] 
[2025-07-23 16:31:00] 2025-07-23 20:30:29,899 | INFO     | ***************************************
[2025-07-23 16:31:00] 2025-07-23 20:30:30,402 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-07-23 16:31:00] 2025-07-23 20:30:30,419 | INFO     | sufficient remaining disk space (29069672448 B)
[2025-07-23 16:31:00] 2025-07-23 20:30:30,420 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-23 16:31:00] 2025-07-23 20:30:30,420 | INFO     | current server update state: UPDATING_FINAL
[2025-07-23 16:31:00] 2025-07-23 20:30:30,420 | INFO     | update_server=False
[2025-07-23 16:31:00] 2025-07-23 20:30:30,420 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-23 16:31:00] 2025-07-23 20:30:30,420 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-23 16:31:00] 2025-07-23 20:30:30,506 | INFO     | all job control threads have been joined
[2025-07-23 16:31:00] 2025-07-23 20:30:30,596 | INFO     | all payload control threads have been joined
[2025-07-23 16:31:00] 2025-07-23 20:30:30,684 | INFO     | all data control threads have been joined
[2025-07-23 16:31:00] 2025-07-23 20:30:30,775 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-07-23 16:31:00] 2025-07-23 20:30:30,775 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-07-23 16:31:00] 2025-07-23 20:30:30,775 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-23 16:31:00] 2025-07-23 20:30:30,775 | INFO     | will abort loop
[2025-07-23 16:31:00] 2025-07-23 20:30:30,943 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-23 16:31:00] 2025-07-23 20:30:31,426 | INFO     | [job] retrieve thread has finished
[2025-07-23 16:31:00] 2025-07-23 20:30:31,451 | INFO     | [job] validate thread has finished
[2025-07-23 16:31:00] 2025-07-23 20:30:31,511 | INFO     | [job] control thread has finished
[2025-07-23 16:31:00] 2025-07-23 20:30:31,601 | INFO     | [payload] control thread has finished
[2025-07-23 16:31:00] 2025-07-23 20:30:31,689 | INFO     | [data] control thread has finished
[2025-07-23 16:31:00] 2025-07-23 20:30:31,781 | INFO     | [job] job monitor thread has finished
[2025-07-23 16:31:00] 2025-07-23 20:30:31,905 | INFO     | [job] create_data_payload thread has finished
[2025-07-23 16:31:00] 2025-07-23 20:30:31,911 | INFO     | [payload] validate_pre thread has finished
[2025-07-23 16:31:00] 2025-07-23 20:30:32,039 | INFO     | [payload] execute_payloads thread has finished
[2025-07-23 16:31:00] 2025-07-23 20:30:32,196 | INFO     | [data] copytool_in thread has finished
[2025-07-23 16:31:00] 2025-07-23 20:30:32,208 | INFO     | [payload] failed_post thread has finished
[2025-07-23 16:31:00] 2025-07-23 20:30:32,426 | INFO     | [data] copytool_out thread has finished
[2025-07-23 16:31:00] 2025-07-23 20:30:33,027 | INFO     | [payload] validate_post thread has finished
[2025-07-23 16:31:00] 2025-07-23 20:30:33,196 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-23 16:31:00] 2025-07-23 20:30:34,198 | INFO     | [job] queue monitor thread has finished
[2025-07-23 16:31:00] 2025-07-23 20:30:34,949 | INFO     | [data] queue_monitor thread has finished
[2025-07-23 16:31:00] 2025-07-23 20:30:40,697 | INFO     | job.realtimelogging is not enabled
[2025-07-23 16:31:00] 2025-07-23 20:30:41,702 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-23 16:31:00] 2025-07-23 20:30:42,898 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140501339744064)>', '<ExcThread(monitor, started 140500350772992)>']
[2025-07-23 16:31:00] 2025-07-23 20:30:47,923 | INFO     | all workflow threads have been joined
[2025-07-23 16:31:00] 2025-07-23 20:30:47,923 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-23 16:31:00] 2025-07-23 20:30:47,926 | INFO     | traces error code: 0
[2025-07-23 16:31:00] 2025-07-23 20:30:47,927 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-23 16:31:00] 2025-07-23 20:31:00,169 | INFO     | PID=30783 has CPU usage=1.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-07-23 16:31:00] 2025-07-23 20:31:00,169 | INFO     | found 0 job(s) in 20 queues
[2025-07-23 16:31:00] 2025-07-23 20:31:00,169 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-23 16:31:00] 2025-07-23 20:31:00,169 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-23 16:31:00] 2025-07-23 20:31:00,169 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-23 16:31:00] 2025-07-23 20:31:00,169 | INFO     | [monitor] control thread has ended
[2025-07-23 16:31:00] 2025-07-23 20:31:00,264 [wrapper] ==== pilot stdout END ====
[2025-07-23 16:31:00] 2025-07-23 20:31:00,267 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-23 16:31:00] 2025-07-23 20:31:00,271 [wrapper] pilotpid: 30783
[2025-07-23 16:31:00] 2025-07-23 20:31:00,274 [wrapper] Pilot exit status: 0
[2025-07-23 16:31:00] 2025-07-23 20:31:00,289 [wrapper] pandaids: 6742301859
[2025-07-23 16:31:00] 2025-07-23 20:31:00,329 [wrapper] cleanup supervisor_pilot  8769 30784
[2025-07-23 16:31:00] 2025-07-23 20:31:00,334 [wrapper] Test setup, not cleaning
[2025-07-23 16:31:00] 2025-07-23 20:31:00,337 [wrapper] apfmon messages muted
[2025-07-23 16:31:00] 2025-07-23 20:31:00,341 [wrapper] ==== wrapper stdout END ====
[2025-07-23 16:31:00] 2025-07-23 20:31:00,344 [wrapper] ==== wrapper stderr END ====
[2025-07-23 16:31:00]  *** Error codes and diagnostics ***
[2025-07-23 16:31:00]     "exeErrorCode": 0,
[2025-07-23 16:31:00]     "exeErrorDiag": "",
[2025-07-23 16:31:00]     "pilotErrorCode": 0,
[2025-07-23 16:31:00]     "pilotErrorDiag": "",
[2025-07-23 16:31:00]  *** Listing of results directory ***
[2025-07-23 16:31:00] total 604868
[2025-07-23 16:31:00] -rw-r--r-- 1 boincer umatlas      5112 Jul 23 07:23 queuedata.json
[2025-07-23 16:31:00] -rwx------ 1 boincer umatlas     36292 Jul 23 07:24 runpilot2-wrapper.sh
[2025-07-23 16:31:00] -rw-r--r-- 1 boincer umatlas    530466 Jul 23 07:24 pilot3.tar.gz
[2025-07-23 16:31:00] -rw-r--r-- 1 boincer umatlas       100 Jul 23 14:45 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-23 16:31:00] -rwxr-xr-x 1 boincer umatlas      7986 Jul 23 14:45 run_atlas
[2025-07-23 16:31:00] -rw-r--r-- 1 boincer umatlas       105 Jul 23 14:45 job.xml
[2025-07-23 16:31:00] -rw-r--r-- 2 boincer umatlas 333450255 Jul 23 14:45 EVNT.45697470._000082.pool.root.1
[2025-07-23 16:31:00] -rw-r--r-- 2 boincer umatlas     15095 Jul 23 14:45 start_atlas.sh
[2025-07-23 16:31:00] drwxrwx--x 2 boincer umatlas      4096 Jul 23 14:45 shared
[2025-07-23 16:31:00] -rw-r--r-- 2 boincer umatlas    542902 Jul 23 14:45 input.tar.gz
[2025-07-23 16:31:00] -rw-r--r-- 1 boincer umatlas         0 Jul 23 14:45 boinc_lockfile
[2025-07-23 16:31:00] -rw-r--r-- 1 boincer umatlas      2613 Jul 23 14:45 pandaJob.out
[2025-07-23 16:31:00] -rw------- 1 boincer umatlas    978487 Jul 23 14:46 agis_schedconf.cvmfs.json
[2025-07-23 16:31:00] -rw------- 1 boincer umatlas   1593041 Jul 23 14:46 agis_ddmendpoints.agis.ALL.json
[2025-07-23 16:31:00] drwx------ 4 boincer umatlas      4096 Jul 23 14:46 pilot3
[2025-07-23 16:31:00] -rw-r--r-- 1 boincer umatlas      5867 Jul 23 16:20 init_data.xml
[2025-07-23 16:31:00] -rw------- 1 boincer umatlas 280150935 Jul 23 16:29 HITS.45697472._005438.pool.root.1
[2025-07-23 16:31:00] -rw-r--r-- 1 boincer umatlas       530 Jul 23 16:30 boinc_task_state.xml
[2025-07-23 16:31:00] -rw------- 1 boincer umatlas      1050 Jul 23 16:30 memory_monitor_summary.json
[2025-07-23 16:31:00] -rw------- 1 boincer umatlas    374817 Jul 23 16:30 log.45697472._005438.job.log.tgz.1
[2025-07-23 16:31:00] -rw------- 1 boincer umatlas        95 Jul 23 16:30 pilot_heartbeat.json
[2025-07-23 16:31:00] -rw------- 1 boincer umatlas      7849 Jul 23 16:30 heartbeat.json
[2025-07-23 16:31:00] -rw-r--r-- 1 boincer umatlas      8192 Jul 23 16:30 boinc_mmap_file
[2025-07-23 16:31:00] -rw-r--r-- 1 boincer umatlas        27 Jul 23 16:30 wrapper_checkpoint.txt
[2025-07-23 16:31:00] -rw------- 1 boincer umatlas       745 Jul 23 16:31 pilotlog.txt
[2025-07-23 16:31:00] -rw------- 1 boincer umatlas    583367 Jul 23 16:31 log.45697472._005438.job.log.1
[2025-07-23 16:31:00] -rw------- 1 boincer umatlas       357 Jul 23 16:31 output.list
[2025-07-23 16:31:00] -rw-r--r-- 1 boincer umatlas       620 Jul 23 16:31 runtime_log
[2025-07-23 16:31:00] -rw------- 1 boincer umatlas    972800 Jul 23 16:31 result.tar.gz
[2025-07-23 16:31:00] -rw-r--r-- 1 boincer umatlas      8662 Jul 23 16:31 runtime_log.err
[2025-07-23 16:31:00] -rw------- 1 boincer umatlas       660 Jul 23 16:31 oVTMDmMlmy7n9Rq4apOajLDm4fhM0noT9bVof3QYDmSAwKDmJi0kRo.diag
[2025-07-23 16:31:00] -rw-r--r-- 1 boincer umatlas     21196 Jul 23 16:31 stderr.txt
[2025-07-23 16:31:00] HITS file was successfully produced:
[2025-07-23 16:31:00] -rw------- 1 boincer umatlas 280150935 Jul 23 16:29 shared/HITS.pool.root.1
[2025-07-23 16:31:00]  *** Contents of shared directory: ***
[2025-07-23 16:31:00] total 600728
[2025-07-23 16:31:00] -rw-r--r-- 2 boincer umatlas 333450255 Jul 23 14:45 ATLAS.root_0
[2025-07-23 16:31:00] -rw-r--r-- 2 boincer umatlas     15095 Jul 23 14:45 start_atlas.sh
[2025-07-23 16:31:00] -rw-r--r-- 2 boincer umatlas    542902 Jul 23 14:45 input.tar.gz
[2025-07-23 16:31:00] -rw------- 1 boincer umatlas 280150935 Jul 23 16:29 HITS.pool.root.1
[2025-07-23 16:31:00] -rw------- 1 boincer umatlas    972800 Jul 23 16:31 result.tar.gz
16:31:01 (27170): run_atlas exited; CPU time 70175.001835
16:31:01 (27170): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN