Stderr output

<core_client_version>7.16.6</core_client_version>
<![CDATA[
<stderr_txt>
23:53:10 (511923): wrapper (7.7.26015): starting
23:53:10 (511923): wrapper: running run_atlas (--nthreads 12)
[2025-07-25 23:53:10] Arguments: --nthreads 12
[2025-07-25 23:53:10] Threads: 12
[2025-07-25 23:53:10] Checking for CVMFS
[2025-07-25 23:53:10] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-25 23:53:10] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-25 23:53:10] Running cvmfs_config stat atlas.cern.ch
[2025-07-25 23:53:10] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-25 23:53:10] 2.12.7.0 3508389 5773 62260 148754 0 57 4061514 4096001 0 130560 0 3229383 99.986 215900 45 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://128.142.248.156:3126 1
[2025-07-25 23:53:10] CVMFS is ok
[2025-07-25 23:53:10] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-25 23:53:10] Checking for apptainer binary...
[2025-07-25 23:53:10] apptainer is not installed, using version from CVMFS
[2025-07-25 23:53:10] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-25 23:53:11] lithium
[2025-07-25 23:53:11] apptainer works
[2025-07-25 23:53:11] Set ATHENA_PROC_NUMBER=12
[2025-07-25 23:53:11] Set ATHENA_CORE_NUMBER=12
[2025-07-25 23:53:11] Starting ATLAS job with PandaID=6743007587
[2025-07-25 23:53:11] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc-client/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-26 02:30:28]  *** The last 200 lines of the pilot log: ***
[2025-07-26 02:30:28] 2025-07-26 00:29:56,713 | INFO     | mean y: 2745474.065359477
[2025-07-26 02:30:28] 2025-07-26 00:29:56,713 | INFO     | work directory size check will use 2537553920 B as a max limit (10% grace limit added)
[2025-07-26 02:30:28] 2025-07-26 00:29:56,713 | INFO     | -- intersect: -29379464918.93621
[2025-07-26 02:30:28] 2025-07-26 00:29:56,713 | INFO     | intersect: -29379464918.93621
[2025-07-26 02:30:28] 2025-07-26 00:29:56,714 | INFO     | chi2: 2.168674509908007
[2025-07-26 02:30:28] 2025-07-26 00:29:56,714 | INFO     | sum of square deviations: 1005179777.0
[2025-07-26 02:30:28] 2025-07-26 00:29:56,715 | INFO     | sum of deviations: 28458935028.5
[2025-07-26 02:30:28] 2025-07-26 00:29:56,715 | INFO     | mean x: 1753484909.5
[2025-07-26 02:30:28] 2025-07-26 00:29:56,715 | INFO     | mean y: 2759317.371621622
[2025-07-26 02:30:28] 2025-07-26 00:29:56,715 | INFO     | -- intersect: -49642402925.99463
[2025-07-26 02:30:28] 2025-07-26 00:29:56,715 | INFO     | intersect: -49642402925.99463
[2025-07-26 02:30:28] 2025-07-26 00:29:56,716 | INFO     | chi2: 1.4654175105237712
[2025-07-26 02:30:28] 2025-07-26 00:29:56,716 | INFO     | current chi2=1.4654175105237712 (change=32.42796446268312 %)
[2025-07-26 02:30:28] 2025-07-26 00:29:56,716 | INFO     | sum of square deviations: 906703512.0
[2025-07-26 02:30:28] 2025-07-26 00:29:56,717 | INFO     | sum of deviations: 27300433002.0
[2025-07-26 02:30:28] 2025-07-26 00:29:56,717 | INFO     | mean x: 1753484757.0
[2025-07-26 02:30:28] 2025-07-26 00:29:56,717 | INFO     | mean y: 2757522.6503496505
[2025-07-26 02:30:28] 2025-07-26 00:29:56,717 | INFO     | -- intersect: -52793876101.18274
[2025-07-26 02:30:28] 2025-07-26 00:29:56,717 | INFO     | intersect: -52793876101.18274
[2025-07-26 02:30:28] 2025-07-26 00:29:56,717 | INFO     | chi2: 1.4666034396257235
[2025-07-26 02:30:28] 2025-07-26 00:29:56,717 | INFO     | current chi2=1.4666034396257235 (change=-0.08092772833923476 %)
[2025-07-26 02:30:28] 2025-07-26 00:29:56,718 | INFO     | right removable region: 142
[2025-07-26 02:30:28] 2025-07-26 00:29:56,718 | INFO     | sum of square deviations: 1005179777.0
[2025-07-26 02:30:28] 2025-07-26 00:29:56,719 | INFO     | sum of deviations: -6469057045.499999
[2025-07-26 02:30:28] 2025-07-26 00:29:56,719 | INFO     | mean x: 1753485214.5
[2025-07-26 02:30:28] 2025-07-26 00:29:56,719 | INFO     | mean y: 2781232.493243243
[2025-07-26 02:30:28] 2025-07-26 00:29:56,719 | INFO     | -- intersect: 11287723628.465563
[2025-07-26 02:30:28] 2025-07-26 00:29:56,719 | INFO     | intersect: 11287723628.465563
[2025-07-26 02:30:28] 2025-07-26 00:29:56,719 | INFO     | chi2: 0.7972563657808505
[2025-07-26 02:30:28] 2025-07-26 00:29:56,719 | INFO     | current chi2=0.7972563657808505 (change=63.23761993150973 %)
[2025-07-26 02:30:28] 2025-07-26 00:29:56,720 | INFO     | sum of square deviations: 906703512.0
[2025-07-26 02:30:28] 2025-07-26 00:29:56,720 | INFO     | sum of deviations: -8670414706.0
[2025-07-26 02:30:28] 2025-07-26 00:29:56,720 | INFO     | mean x: 1753485367.0
[2025-07-26 02:30:28] 2025-07-26 00:29:56,721 | INFO     | mean y: 2784555.951048951
[2025-07-26 02:30:28] 2025-07-26 00:29:56,721 | INFO     | -- intersect: 16770609000.853617
[2025-07-26 02:30:28] 2025-07-26 00:29:56,721 | INFO     | intersect: 16770609000.853617
[2025-07-26 02:30:28] 2025-07-26 00:29:56,721 | INFO     | chi2: 0.7694243786975659
[2025-07-26 02:30:28] 2025-07-26 00:29:56,722 | INFO     | current chi2=0.7694243786975659 (change=3.4909708191574413 %)
[2025-07-26 02:30:28] 2025-07-26 00:29:56,722 | INFO     | left removable region: 20
[2025-07-26 02:30:28] 2025-07-26 00:29:56,722 | INFO     | sum of square deviations: 563026370.5
[2025-07-26 02:30:28] 2025-07-26 00:29:56,723 | INFO     | sum of deviations: 3557078024.500005
[2025-07-26 02:30:28] 2025-07-26 00:29:56,723 | INFO     | mean x: 1753485336.5
[2025-07-26 02:30:28] 2025-07-26 00:29:56,723 | INFO     | mean y: 2795923.3852459015
[2025-07-26 02:30:28] 2025-07-26 00:29:56,723 | INFO     | -- intersect: -11075342656.887783
[2025-07-26 02:30:28] 2025-07-26 00:29:56,723 | INFO     | intersect: -11075342656.887783
[2025-07-26 02:30:28] 2025-07-26 00:29:56,723 | INFO     | chi2: 0.0013699584384994665
[2025-07-26 02:30:28] 2025-07-26 00:29:56,724 | INFO     | -- intersect: -11075342656.887783
[2025-07-26 02:30:28] 2025-07-26 00:29:56,724 | INFO     | current memory leak: 6.32 B/s (using 122 data points, chi2=0.00)
[2025-07-26 02:30:28] 2025-07-26 00:29:56,724 | INFO     | could have reported an average CPU frequency of 2708 MHz (8 samples)
[2025-07-26 02:30:28] 2025-07-26 00:29:56,725 | INFO     | ..............................
[2025-07-26 02:30:28] 2025-07-26 00:29:56,725 | INFO     | . Timing measurements:
[2025-07-26 02:30:28] 2025-07-26 00:29:56,725 | INFO     | . get job = 0 s
[2025-07-26 02:30:28] 2025-07-26 00:29:56,725 | INFO     | . initial setup = 1 s
[2025-07-26 02:30:28] 2025-07-26 00:29:56,725 | INFO     | . payload setup = 6 s
[2025-07-26 02:30:28] 2025-07-26 00:29:56,725 | INFO     | size of work directory /var/lib/boinc-client/slots/0/PanDA_Pilot-6743007587: 5014189 B (within 2537553920 B limit)
[2025-07-26 02:30:28] 2025-07-26 00:29:56,725 | INFO     | . stage-in = 0 s
[2025-07-26 02:30:28] 2025-07-26 00:29:56,726 | INFO     | . payload execution = 9290 s
[2025-07-26 02:30:28] 2025-07-26 00:29:56,726 | INFO     | pfn file=/var/lib/boinc-client/slots/0/PanDA_Pilot-6743007587/HITS.45697541._004978.pool.root.1 does not exist (skip from workdir size calculation)
[2025-07-26 02:30:28] 2025-07-26 00:29:56,726 | INFO     | . stage-out = 0 s
[2025-07-26 02:30:28] 2025-07-26 00:29:56,726 | INFO     | total size of present files: 0 B (workdir size: 5014189 B)
[2025-07-26 02:30:28] 2025-07-26 00:29:56,726 | INFO     | . log creation = 0 s
[2025-07-26 02:30:28] 2025-07-26 00:29:56,727 | INFO     | output file size check: skipping output file /var/lib/boinc-client/slots/0/PanDA_Pilot-6743007587/HITS.45697541._004978.pool.root.1 since it does not exist
[2025-07-26 02:30:28] 2025-07-26 00:29:56,727 | INFO     | ..............................
[2025-07-26 02:30:28] 2025-07-26 00:29:56,817 | INFO     | 
[2025-07-26 02:30:28] 2025-07-26 00:29:56,817 | INFO     | job summary report
[2025-07-26 02:30:28] 2025-07-26 00:29:56,817 | INFO     | --------------------------------------------------
[2025-07-26 02:30:28] 2025-07-26 00:29:56,818 | INFO     | PanDA job id: 6743007587
[2025-07-26 02:30:28] 2025-07-26 00:29:56,818 | INFO     | task id: 45697541
[2025-07-26 02:30:28] 2025-07-26 00:29:56,818 | INFO     | errors: (none)
[2025-07-26 02:30:28] 2025-07-26 00:29:56,818 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-26 02:30:28] 2025-07-26 00:29:56,818 | INFO     | pilot state: finished 
[2025-07-26 02:30:28] 2025-07-26 00:29:56,819 | INFO     | transexitcode: 0
[2025-07-26 02:30:28] 2025-07-26 00:29:56,819 | INFO     | exeerrorcode: 0
[2025-07-26 02:30:28] 2025-07-26 00:29:56,819 | INFO     | exeerrordiag: 
[2025-07-26 02:30:28] 2025-07-26 00:29:56,819 | INFO     | exitcode: 0
[2025-07-26 02:30:28] 2025-07-26 00:29:56,819 | INFO     | exitmsg: OK
[2025-07-26 02:30:28] 2025-07-26 00:29:56,820 | INFO     | cpuconsumptiontime: 103432 s
[2025-07-26 02:30:28] 2025-07-26 00:29:56,820 | INFO     | nevents: 400
[2025-07-26 02:30:28] 2025-07-26 00:29:56,820 | INFO     | neventsw: 0
[2025-07-26 02:30:28] 2025-07-26 00:29:56,820 | INFO     | pid: 522303
[2025-07-26 02:30:28] 2025-07-26 00:29:56,820 | INFO     | pgrp: 522303
[2025-07-26 02:30:28] 2025-07-26 00:29:56,821 | INFO     | corecount: 12
[2025-07-26 02:30:28] 2025-07-26 00:29:56,821 | INFO     | event service: False
[2025-07-26 02:30:28] 2025-07-26 00:29:56,821 | INFO     | sizes: {0: 2397363, 1: 2397562, 4: 2397824, 11: 2397852, 9299: 2426141, 9301: 2435153, 9303: 2435337, 9380: 2435559}
[2025-07-26 02:30:28] 2025-07-26 00:29:56,821 | INFO     | --------------------------------------------------
[2025-07-26 02:30:28] 2025-07-26 00:29:56,821 | INFO     | 
[2025-07-26 02:30:28] 2025-07-26 00:29:56,822 | INFO     | executing command: ls -lF /var/lib/boinc-client/slots/0
[2025-07-26 02:30:28] 2025-07-26 00:29:56,835 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-26 02:30:28] 2025-07-26 00:29:56,835 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-26 02:30:28] 2025-07-26 00:29:56,835 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-26 02:30:28] 2025-07-26 00:29:56,835 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-26 02:30:28] 2025-07-26 00:29:56,836 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-26 02:30:28] 2025-07-26 00:29:56,836 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-26 02:30:28] 2025-07-26 00:29:56,836 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-26 02:30:28] 2025-07-26 00:29:56,836 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-26 02:30:28] 2025-07-26 00:29:56,836 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-26 02:30:28] 2025-07-26 00:29:56,837 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-26 02:30:28] 2025-07-26 00:29:56,837 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-26 02:30:28] 2025-07-26 00:29:56,837 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-26 02:30:28] 2025-07-26 00:29:56,837 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-26 02:30:28] 2025-07-26 00:29:56,837 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-26 02:30:28] 2025-07-26 00:29:56,837 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-26 02:30:28] 2025-07-26 00:29:56,838 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-26 02:30:28] 2025-07-26 00:29:56,838 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-26 02:30:28] 2025-07-26 00:29:56,838 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-26 02:30:28] 2025-07-26 00:29:56,838 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-26 02:30:28] 2025-07-26 00:29:56,838 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-26 02:30:28] 2025-07-26 00:29:56,838 | INFO     | job 6743007587 has completed (purged errors)
[2025-07-26 02:30:28] 2025-07-26 00:29:56,839 | INFO     | overall cleanup function is called
[2025-07-26 02:30:28] 2025-07-26 00:29:56,908 | INFO     | number of running child processes to parent process 522303: 1
[2025-07-26 02:30:28] 2025-07-26 00:29:56,909 | INFO     | maximum number of monitored processes: 6
[2025-07-26 02:30:28] 2025-07-26 00:29:56,909 | INFO     | aborting job monitoring since job object (job id=6743007587) has expired
[2025-07-26 02:30:28] 2025-07-26 00:29:57,847 | INFO     | --- collectZombieJob: --- 10, [522303]
[2025-07-26 02:30:28] 2025-07-26 00:29:57,847 | INFO     | zombie collector waiting for pid 522303
[2025-07-26 02:30:28] 2025-07-26 00:29:57,848 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-26 02:30:28] 2025-07-26 00:29:57,848 | INFO     | collected zombie processes
[2025-07-26 02:30:28] 2025-07-26 00:29:57,848 | INFO     | will attempt to kill all subprocesses of pid=522303
[2025-07-26 02:30:28] 2025-07-26 00:29:57,925 | INFO     | process IDs to be killed: [522303] (in reverse order)
[2025-07-26 02:30:28] 2025-07-26 00:29:57,962 | WARNING  | found no corresponding commands to process id(s)
[2025-07-26 02:30:28] 2025-07-26 00:29:57,962 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-26 02:30:28] 2025-07-26 00:29:57,965 | INFO     | did not find any defunct processes belonging to 522303
[2025-07-26 02:30:28] 2025-07-26 00:29:57,968 | INFO     | did not find any defunct processes belonging to 522303
[2025-07-26 02:30:28] 2025-07-26 00:29:57,968 | INFO     | ready for new job
[2025-07-26 02:30:28] 2025-07-26 00:29:57,968 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-26 02:30:28] 2025-07-26 00:29:57,970 | INFO     | ***************************************
[2025-07-26 02:30:28] 2025-07-26 00:29:57,970 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-26 02:30:28] 2025-07-26 00:29:57,970 | INFO     | ***************************************
[2025-07-26 02:30:28] 2025-07-26 00:29:57,970 | INFO     | 
[2025-07-26 02:30:28] 2025-07-26 00:29:57,990 | INFO     | architecture information:
[2025-07-26 02:30:28] 2025-07-26 00:29:57,991 | INFO     | executing command: cat /etc/os-release
[2025-07-26 02:30:28] 2025-07-26 00:29:58,000 | INFO     | cat /etc/os-release:
[2025-07-26 02:30:28] NAME="CentOS Linux"
[2025-07-26 02:30:28] VERSION="7 (Core)"
[2025-07-26 02:30:28] ID="centos"
[2025-07-26 02:30:28] ID_LIKE="rhel fedora"
[2025-07-26 02:30:28] VERSION_ID="7"
[2025-07-26 02:30:28] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-26 02:30:28] ANSI_COLOR="0;31"
[2025-07-26 02:30:28] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-26 02:30:28] HOME_URL="https://www.centos.org/"
[2025-07-26 02:30:28] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-26 02:30:28] 
[2025-07-26 02:30:28] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-26 02:30:28] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-26 02:30:28] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-26 02:30:28] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-26 02:30:28] 
[2025-07-26 02:30:28] 2025-07-26 00:29:58,000 | INFO     | ***************************************
[2025-07-26 02:30:28] 2025-07-26 00:29:58,501 | INFO     | executing command: df -mP /var/lib/boinc-client/slots/0
[2025-07-26 02:30:28] 2025-07-26 00:29:58,512 | INFO     | sufficient remaining disk space (33439088640 B)
[2025-07-26 02:30:28] 2025-07-26 00:29:58,512 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-26 02:30:28] 2025-07-26 00:29:58,512 | INFO     | current server update state: UPDATING_FINAL
[2025-07-26 02:30:28] 2025-07-26 00:29:58,512 | INFO     | update_server=False
[2025-07-26 02:30:28] 2025-07-26 00:29:58,512 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-26 02:30:28] 2025-07-26 00:29:58,513 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-26 02:30:28] 2025-07-26 00:29:58,513 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-26 02:30:28] 2025-07-26 00:29:58,513 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-26 02:30:28] 2025-07-26 00:29:58,513 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-26 02:30:28] 2025-07-26 00:29:58,514 | INFO     | aborting loop
[2025-07-26 02:30:28] 2025-07-26 00:29:59,062 | INFO     | all data control threads have been joined
[2025-07-26 02:30:28] 2025-07-26 00:29:59,518 | INFO     | [job] job monitor thread has finished
[2025-07-26 02:30:28] 2025-07-26 00:29:59,518 | INFO     | [job] retrieve thread has finished
[2025-07-26 02:30:28] 2025-07-26 00:29:59,519 | INFO     | [job] queue monitor thread has finished
[2025-07-26 02:30:28] 2025-07-26 00:29:59,702 | INFO     | [payload] execute_payloads thread has finished
[2025-07-26 02:30:28] 2025-07-26 00:29:59,854 | INFO     | all job control threads have been joined
[2025-07-26 02:30:28] 2025-07-26 00:30:00,014 | INFO     | all payload control threads have been joined
[2025-07-26 02:30:28] 2025-07-26 00:30:00,065 | INFO     | [data] control thread has finished
[2025-07-26 02:30:28] 2025-07-26 00:30:00,198 | INFO     | [job] validate thread has finished
[2025-07-26 02:30:28] 2025-07-26 00:30:00,267 | INFO     | [data] copytool_in thread has finished
[2025-07-26 02:30:28] 2025-07-26 00:30:00,519 | INFO     | [data] copytool_out thread has finished
[2025-07-26 02:30:28] 2025-07-26 00:30:00,519 | INFO     | [job] create_data_payload thread has finished
[2025-07-26 02:30:28] 2025-07-26 00:30:00,522 | INFO     | [payload] validate_post thread has finished
[2025-07-26 02:30:28] 2025-07-26 00:30:00,713 | INFO     | [payload] validate_pre thread has finished
[2025-07-26 02:30:28] 2025-07-26 00:30:00,829 | INFO     | [payload] failed_post thread has finished
[2025-07-26 02:30:28] 2025-07-26 00:30:00,860 | INFO     | [job] control thread has finished
[2025-07-26 02:30:28] 2025-07-26 00:30:01,019 | INFO     | [payload] control thread has finished
[2025-07-26 02:30:28] 2025-07-26 00:30:02,520 | INFO     | [data] queue_monitor thread has finished
[2025-07-26 02:30:28] 2025-07-26 00:30:08,821 | INFO     | job.realtimelogging is not enabled
[2025-07-26 02:30:28] 2025-07-26 00:30:09,825 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-26 02:30:28] 2025-07-26 00:30:11,048 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140239929493312)>', '<ExcThread(monitor, started 140239104358144)>']
[2025-07-26 02:30:28] 2025-07-26 00:30:16,073 | INFO     | all workflow threads have been joined
[2025-07-26 02:30:28] 2025-07-26 00:30:16,073 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-26 02:30:28] 2025-07-26 00:30:16,074 | INFO     | traces error code: 0
[2025-07-26 02:30:28] 2025-07-26 00:30:16,074 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-26 02:30:28] 2025-07-26 00:30:28,589 | INFO     | PID=515658 has CPU usage=1.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-07-26 02:30:28] 2025-07-26 00:30:28,589 | INFO     | found 0 job(s) in 20 queues
[2025-07-26 02:30:28] 2025-07-26 00:30:28,589 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-26 02:30:28] 2025-07-26 00:30:28,589 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-26 02:30:28] 2025-07-26 00:30:28,589 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-26 02:30:28] 2025-07-26 00:30:28,589 | INFO     | [monitor] control thread has ended
[2025-07-26 02:30:28] 2025-07-26 00:30:28,680 [wrapper] ==== pilot stdout END ====
[2025-07-26 02:30:28] 2025-07-26 00:30:28,683 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-26 02:30:28] 2025-07-26 00:30:28,685 [wrapper] pilotpid: 515658
[2025-07-26 02:30:28] 2025-07-26 00:30:28,687 [wrapper] Pilot exit status: 0
[2025-07-26 02:30:28] 2025-07-26 00:30:28,696 [wrapper] pandaids: 6743007587
[2025-07-26 02:30:28] 2025-07-26 00:30:28,719 [wrapper] cleanup supervisor_pilot  539222 515659
[2025-07-26 02:30:28] 2025-07-26 00:30:28,721 [wrapper] Test setup, not cleaning
[2025-07-26 02:30:28] 2025-07-26 00:30:28,724 [wrapper] apfmon messages muted
[2025-07-26 02:30:28] 2025-07-26 00:30:28,726 [wrapper] ==== wrapper stdout END ====
[2025-07-26 02:30:28] 2025-07-26 00:30:28,729 [wrapper] ==== wrapper stderr END ====
[2025-07-26 02:30:28]  *** Error codes and diagnostics ***
[2025-07-26 02:30:28]     "exeErrorCode": 0,
[2025-07-26 02:30:28]     "exeErrorDiag": "",
[2025-07-26 02:30:28]     "pilotErrorCode": 0,
[2025-07-26 02:30:28]     "pilotErrorDiag": "",
[2025-07-26 02:30:28]  *** Listing of results directory ***
[2025-07-26 02:30:28] total 644008
[2025-07-26 02:30:28] -rw-r--r-- 1 boinc boinc    530466 Jul 23 04:25 pilot3.tar.gz
[2025-07-26 02:30:28] -rw-r--r-- 1 boinc boinc      5112 Jul 23 05:03 queuedata.json
[2025-07-26 02:30:28] -rwx------ 1 boinc boinc     36292 Jul 23 05:06 runpilot2-wrapper.sh
[2025-07-26 02:30:28] -rw-r--r-- 1 boinc boinc       100 Jul 25 23:53 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-26 02:30:28] -rwxr-xr-x 1 boinc boinc      7986 Jul 25 23:53 run_atlas
[2025-07-26 02:30:28] -rw-r--r-- 1 boinc boinc       105 Jul 25 23:53 job.xml
[2025-07-26 02:30:28] -rw-r--r-- 1 boinc boinc      6048 Jul 25 23:53 init_data.xml
[2025-07-26 02:30:28] -rw-r--r-- 2 boinc boinc 345235677 Jul 25 23:53 EVNT.45697539._000165.pool.root.1
[2025-07-26 02:30:28] -rw-r--r-- 2 boinc boinc     15095 Jul 25 23:53 start_atlas.sh
[2025-07-26 02:30:28] drwxrwx--x 2 boinc boinc      4096 Jul 25 23:53 shared
[2025-07-26 02:30:28] -rw-r--r-- 2 boinc boinc    542898 Jul 25 23:53 input.tar.gz
[2025-07-26 02:30:28] -rw-r--r-- 1 boinc boinc         0 Jul 25 23:53 boinc_lockfile
[2025-07-26 02:30:28] -rw-r--r-- 1 boinc boinc      2602 Jul 25 23:53 pandaJob.out
[2025-07-26 02:30:28] -rw------- 1 boinc boinc    980001 Jul 25 23:53 agis_schedconf.cvmfs.json
[2025-07-26 02:30:28] -rw------- 1 boinc boinc   1593052 Jul 25 23:53 agis_ddmendpoints.agis.ALL.json
[2025-07-26 02:30:28] drwx------ 4 boinc boinc      4096 Jul 25 23:53 pilot3
[2025-07-26 02:30:28] -rw------- 1 boinc boinc 307805334 Jul 26 02:27 HITS.45697541._004978.pool.root.1
[2025-07-26 02:30:28] -rw-r--r-- 1 boinc boinc       531 Jul 26 02:28 boinc_task_state.xml
[2025-07-26 02:30:28] -rw------- 1 boinc boinc      1069 Jul 26 02:28 memory_monitor_summary.json
[2025-07-26 02:30:28] -rw------- 1 boinc boinc    426599 Jul 26 02:28 log.45697541._004978.job.log.tgz.1
[2025-07-26 02:30:28] -rw------- 1 boinc boinc        95 Jul 26 02:29 pilot_heartbeat.json
[2025-07-26 02:30:28] -rw------- 1 boinc boinc      7834 Jul 26 02:29 heartbeat.json
[2025-07-26 02:30:28] -rw-r--r-- 1 boinc boinc      8192 Jul 26 02:30 boinc_mmap_file
[2025-07-26 02:30:28] -rw-r--r-- 1 boinc boinc        28 Jul 26 02:30 wrapper_checkpoint.txt
[2025-07-26 02:30:28] -rw------- 1 boinc boinc       746 Jul 26 02:30 pilotlog.txt
[2025-07-26 02:30:28] -rw------- 1 boinc boinc    844547 Jul 26 02:30 log.45697541._004978.job.log.1
[2025-07-26 02:30:28] -rw------- 1 boinc boinc       357 Jul 26 02:30 output.list
[2025-07-26 02:30:28] -rw-r--r-- 1 boinc boinc       620 Jul 26 02:30 runtime_log
[2025-07-26 02:30:28] -rw------- 1 boinc boinc   1290240 Jul 26 02:30 result.tar.gz
[2025-07-26 02:30:28] -rw------- 1 boinc boinc       654 Jul 26 02:30 uDMODm5yey7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmMlKLDmrjEyKo.diag
[2025-07-26 02:30:28] -rw-r--r-- 1 boinc boinc      8717 Jul 26 02:30 runtime_log.err
[2025-07-26 02:30:28] -rw-r--r-- 1 boinc boinc     21062 Jul 26 02:30 stderr.txt
[2025-07-26 02:30:28] HITS file was successfully produced:
[2025-07-26 02:30:28] -rw------- 1 boinc boinc 307805334 Jul 26 02:27 shared/HITS.pool.root.1
[2025-07-26 02:30:28]  *** Contents of shared directory: ***
[2025-07-26 02:30:28] total 639556
[2025-07-26 02:30:28] -rw-r--r-- 2 boinc boinc 345235677 Jul 25 23:53 ATLAS.root_0
[2025-07-26 02:30:28] -rw-r--r-- 2 boinc boinc     15095 Jul 25 23:53 start_atlas.sh
[2025-07-26 02:30:28] -rw-r--r-- 2 boinc boinc    542898 Jul 25 23:53 input.tar.gz
[2025-07-26 02:30:28] -rw------- 1 boinc boinc 307805334 Jul 26 02:27 HITS.pool.root.1
[2025-07-26 02:30:28] -rw------- 1 boinc boinc   1290240 Jul 26 02:30 result.tar.gz
02:30:29 (511923): run_atlas exited; CPU time 103117.219316
02:30:29 (511923): called boinc_finish(0)

</stderr_txt>
]]>

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