Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
13:44:57 (2404748): wrapper (7.7.26015): starting
13:44:57 (2404748): wrapper: running run_atlas (--nthreads 12)
[2025-07-23 13:44:57] Arguments: --nthreads 12
[2025-07-23 13:44:57] Threads: 12
[2025-07-23 13:44:57] Checking for CVMFS
[2025-07-23 13:44:57] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-23 13:44:57] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-23 13:44:57] Running cvmfs_config stat atlas.cern.ch
[2025-07-23 13:44:57] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-23 13:44:57] 2.13.0.0 1071838 12937 299004 148666 1 396 28860803 32935936 22312 16776704 0 42720122 99.531 51616639 9435 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-07-23 13:44:57] CVMFS is ok
[2025-07-23 13:44:57] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-07-23 13:44:57] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-07-23 13:44:57] Further information can be found at the LHC@home message board.
[2025-07-23 13:44:57] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-23 13:44:57] Checking for apptainer binary...
[2025-07-23 13:44:57] Using apptainer found in PATH at /usr/bin/apptainer
[2025-07-23 13:44:57] Running /usr/bin/apptainer --version
[2025-07-23 13:44:57] apptainer version 1.4.1-1.el9
[2025-07-23 13:44:57] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-23 13:44:57] c-8-39.aglt2.org
[2025-07-23 13:44:57] apptainer works
[2025-07-23 13:44:57] Set ATHENA_PROC_NUMBER=12
[2025-07-23 13:44:57] Set ATHENA_CORE_NUMBER=12
[2025-07-23 13:44:57] Starting ATLAS job with PandaID=6741919293
[2025-07-23 13:44:57] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-23 17:56:18]  *** The last 200 lines of the pilot log: ***
[2025-07-23 17:56:18] 2025-07-23 21:55:41,957 | INFO     | PID=2409063 has CPU usage=13.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2025-07-23 17:56:18] 2025-07-23 21:55:41,958 | INFO     | .. there are 34 such processes running
[2025-07-23 17:56:18] 2025-07-23 21:55:43,840 | INFO     | monitor loop #854: job 0:6741919293 is in state 'finished'
[2025-07-23 17:56:18] 2025-07-23 21:55:43,840 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-23 17:56:18] 2025-07-23 21:55:45,646 | INFO     | CPU arch script returned: x86-64-v3
[2025-07-23 17:56:18] 2025-07-23 21:55:45,664 | INFO     | found 24 cores (12 cores per socket, 2 sockets) HT, CPU MHz: 2727.2128958333337
[2025-07-23 17:56:18] 2025-07-23 21:55:45,670 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6741919293/memory_monitor_summary.json (trf name=prmon)
[2025-07-23 17:56:18] 2025-07-23 21:55:45,671 | INFO     | extracted standard info from prmon json
[2025-07-23 17:56:18] 2025-07-23 21:55:45,671 | INFO     | extracted standard memory fields from prmon json
[2025-07-23 17:56:18] 2025-07-23 21:55:45,671 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-23 17:56:18] 2025-07-23 21:55:45,672 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-23 17:56:18] 2025-07-23 21:55:45,672 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-23 17:56:18] 2025-07-23 21:55:45,677 | INFO     | fitting pss+swap vs Time
[2025-07-23 17:56:18] 2025-07-23 21:55:45,678 | INFO     | sum of square deviations: 4616356638.849573
[2025-07-23 17:56:18] 2025-07-23 21:55:45,680 | INFO     | sum of deviations: 45910341239.72362
[2025-07-23 17:56:18] 2025-07-23 21:55:45,680 | INFO     | mean x: 1753300213.0934958
[2025-07-23 17:56:18] 2025-07-23 21:55:45,680 | INFO     | mean y: 2426543.5772357723
[2025-07-23 17:56:18] 2025-07-23 21:55:45,680 | INFO     | -- intersect: -17434400239.126087
[2025-07-23 17:56:18] 2025-07-23 21:55:45,680 | INFO     | intersect: -17434400239.126087
[2025-07-23 17:56:18] 2025-07-23 21:55:45,681 | INFO     | chi2: 1.7179105702670079
[2025-07-23 17:56:18] 2025-07-23 21:55:45,681 | INFO     | sum of square deviations: 4340595187.759306
[2025-07-23 17:56:18] 2025-07-23 21:55:45,683 | INFO     | sum of deviations: 46159846620.56431
[2025-07-23 17:56:18] 2025-07-23 21:55:45,683 | INFO     | mean x: 1753300060.6016598
[2025-07-23 17:56:18] 2025-07-23 21:55:45,683 | INFO     | mean y: 2426686.589211618
[2025-07-23 17:56:18] 2025-07-23 21:55:45,683 | INFO     | -- intersect: -18642956809.533894
[2025-07-23 17:56:18] 2025-07-23 21:55:45,683 | INFO     | intersect: -18642956809.533894
[2025-07-23 17:56:18] 2025-07-23 21:55:45,684 | INFO     | chi2: 1.7145610423561994
[2025-07-23 17:56:18] 2025-07-23 21:55:45,684 | INFO     | current chi2=1.7145610423561994 (change=0.19497684971388493 %)
[2025-07-23 17:56:18] 2025-07-23 21:55:45,684 | INFO     | right removable region: 240
[2025-07-23 17:56:18] 2025-07-23 21:55:45,685 | INFO     | sum of square deviations: 4340520889.551882
[2025-07-23 17:56:18] 2025-07-23 21:55:45,686 | INFO     | sum of deviations: 5233314398.946059
[2025-07-23 17:56:18] 2025-07-23 21:55:45,686 | INFO     | mean x: 1753300365.6058092
[2025-07-23 17:56:18] 2025-07-23 21:55:45,687 | INFO     | mean y: 2448883.609958506
[2025-07-23 17:56:18] 2025-07-23 21:55:45,687 | INFO     | -- intersect: -2111484508.8289301
[2025-07-23 17:56:18] 2025-07-23 21:55:45,687 | INFO     | intersect: -2111484508.8289301
[2025-07-23 17:56:18] 2025-07-23 21:55:45,687 | INFO     | chi2: 0.25417708389942906
[2025-07-23 17:56:18] 2025-07-23 21:55:45,687 | INFO     | current chi2=0.25417708389942906 (change=85.20428896016844 %)
[2025-07-23 17:56:18] 2025-07-23 21:55:45,688 | INFO     | sum of square deviations: 4075894652.6779633
[2025-07-23 17:56:18] 2025-07-23 21:55:45,689 | INFO     | sum of deviations: 1956263034.8644073
[2025-07-23 17:56:18] 2025-07-23 21:55:45,690 | INFO     | mean x: 1753300518.118644
[2025-07-23 17:56:18] 2025-07-23 21:55:45,690 | INFO     | mean y: 2450715.0762711866
[2025-07-23 17:56:18] 2025-07-23 21:55:45,690 | INFO     | -- intersect: -839061955.1176398
[2025-07-23 17:56:18] 2025-07-23 21:55:45,690 | INFO     | intersect: -839061955.1176398
[2025-07-23 17:56:18] 2025-07-23 21:55:45,690 | INFO     | chi2: 0.1945983163686652
[2025-07-23 17:56:18] 2025-07-23 21:55:45,691 | INFO     | current chi2=0.1945983163686652 (change=23.43986586703369 %)
[2025-07-23 17:56:18] 2025-07-23 21:55:45,691 | INFO     | left removable region: 20
[2025-07-23 17:56:18] 2025-07-23 21:55:45,691 | INFO     | sum of square deviations: 3301845151.3454576
[2025-07-23 17:56:18] 2025-07-23 21:55:45,692 | INFO     | sum of deviations: 20597206609.363632
[2025-07-23 17:56:18] 2025-07-23 21:55:45,693 | INFO     | mean x: 1753300640.1454546
[2025-07-23 17:56:18] 2025-07-23 21:55:45,693 | INFO     | mean y: 2440158.1136363638
[2025-07-23 17:56:18] 2025-07-23 21:55:45,693 | INFO     | -- intersect: -10934806707.836407
[2025-07-23 17:56:18] 2025-07-23 21:55:45,693 | INFO     | intersect: -10934806707.836407
[2025-07-23 17:56:18] 2025-07-23 21:55:45,693 | INFO     | chi2: 0.058314672840525696
[2025-07-23 17:56:18] 2025-07-23 21:55:45,693 | INFO     | -- intersect: -10934806707.836407
[2025-07-23 17:56:18] 2025-07-23 21:55:45,694 | INFO     | current memory leak: 6.24 B/s (using 220 data points, chi2=0.06)
[2025-07-23 17:56:18] 2025-07-23 21:55:45,694 | INFO     | could have reported an average CPU frequency of 2713 MHz (12 samples)
[2025-07-23 17:56:18] 2025-07-23 21:55:45,694 | INFO     | ..............................
[2025-07-23 17:56:18] 2025-07-23 21:55:45,695 | INFO     | . Timing measurements:
[2025-07-23 17:56:18] 2025-07-23 21:55:45,695 | INFO     | . get job = 0 s
[2025-07-23 17:56:18] 2025-07-23 21:55:45,695 | INFO     | . initial setup = 3 s
[2025-07-23 17:56:18] 2025-07-23 21:55:45,695 | INFO     | . payload setup = 8 s
[2025-07-23 17:56:18] 2025-07-23 21:55:45,695 | INFO     | . stage-in = 0 s
[2025-07-23 17:56:18] 2025-07-23 21:55:45,695 | INFO     | . payload execution = 14994 s
[2025-07-23 17:56:18] 2025-07-23 21:55:45,695 | INFO     | . stage-out = 2 s
[2025-07-23 17:56:18] 2025-07-23 21:55:45,695 | INFO     | . log creation = 0 s
[2025-07-23 17:56:18] 2025-07-23 21:55:45,695 | INFO     | ..............................
[2025-07-23 17:56:18] 2025-07-23 21:55:45,799 | INFO     | 
[2025-07-23 17:56:18] 2025-07-23 21:55:45,799 | INFO     | job summary report
[2025-07-23 17:56:18] 2025-07-23 21:55:45,799 | INFO     | --------------------------------------------------
[2025-07-23 17:56:18] 2025-07-23 21:55:45,799 | INFO     | PanDA job id: 6741919293
[2025-07-23 17:56:18] 2025-07-23 21:55:45,800 | INFO     | task id: 45697472
[2025-07-23 17:56:18] 2025-07-23 21:55:45,800 | INFO     | errors: (none)
[2025-07-23 17:56:18] 2025-07-23 21:55:45,800 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-23 17:56:18] 2025-07-23 21:55:45,800 | INFO     | pilot state: finished 
[2025-07-23 17:56:18] 2025-07-23 21:55:45,800 | INFO     | transexitcode: 0
[2025-07-23 17:56:18] 2025-07-23 21:55:45,800 | INFO     | exeerrorcode: 0
[2025-07-23 17:56:18] 2025-07-23 21:55:45,800 | INFO     | exeerrordiag: 
[2025-07-23 17:56:18] 2025-07-23 21:55:45,800 | INFO     | exitcode: 0
[2025-07-23 17:56:18] 2025-07-23 21:55:45,800 | INFO     | exitmsg: OK
[2025-07-23 17:56:18] 2025-07-23 21:55:45,800 | INFO     | cpuconsumptiontime: 80936 s
[2025-07-23 17:56:18] 2025-07-23 21:55:45,800 | INFO     | nevents: 400
[2025-07-23 17:56:18] 2025-07-23 21:55:45,801 | INFO     | neventsw: 0
[2025-07-23 17:56:18] 2025-07-23 21:55:45,801 | INFO     | pid: 2416392
[2025-07-23 17:56:18] 2025-07-23 21:55:45,801 | INFO     | pgrp: 2416392
[2025-07-23 17:56:18] 2025-07-23 21:55:45,801 | INFO     | corecount: 12
[2025-07-23 17:56:18] 2025-07-23 21:55:45,801 | INFO     | event service: False
[2025-07-23 17:56:18] 2025-07-23 21:55:45,801 | INFO     | sizes: {0: 2396698, 1: 2397554, 6: 2397816, 12: 2397844, 15006: 2428694, 15010: 2437692, 15011: 2437876, 15019: 2438070}
[2025-07-23 17:56:18] 2025-07-23 21:55:45,801 | INFO     | --------------------------------------------------
[2025-07-23 17:56:18] 2025-07-23 21:55:45,801 | INFO     | 
[2025-07-23 17:56:18] 2025-07-23 21:55:45,801 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-07-23 17:56:18] 2025-07-23 21:55:45,824 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-23 17:56:18] 2025-07-23 21:55:45,824 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-23 17:56:18] 2025-07-23 21:55:45,824 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-23 17:56:18] 2025-07-23 21:55:45,824 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-23 17:56:18] 2025-07-23 21:55:45,824 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-23 17:56:18] 2025-07-23 21:55:45,825 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-23 17:56:18] 2025-07-23 21:55:45,825 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-23 17:56:18] 2025-07-23 21:55:45,825 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-23 17:56:18] 2025-07-23 21:55:45,825 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-23 17:56:18] 2025-07-23 21:55:45,825 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-23 17:56:18] 2025-07-23 21:55:45,825 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-23 17:56:18] 2025-07-23 21:55:45,825 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-23 17:56:18] 2025-07-23 21:55:45,826 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-23 17:56:18] 2025-07-23 21:55:45,826 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-23 17:56:18] 2025-07-23 21:55:45,826 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-23 17:56:18] 2025-07-23 21:55:45,826 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-23 17:56:18] 2025-07-23 21:55:45,826 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-23 17:56:18] 2025-07-23 21:55:45,826 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-23 17:56:18] 2025-07-23 21:55:45,826 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-23 17:56:18] 2025-07-23 21:55:45,827 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-23 17:56:18] 2025-07-23 21:55:45,827 | INFO     | job 6741919293 has completed (purged errors)
[2025-07-23 17:56:18] 2025-07-23 21:55:45,827 | INFO     | overall cleanup function is called
[2025-07-23 17:56:18] 2025-07-23 21:55:46,835 | INFO     | --- collectZombieJob: --- 10, [2416392]
[2025-07-23 17:56:18] 2025-07-23 21:55:46,835 | INFO     | zombie collector waiting for pid 2416392
[2025-07-23 17:56:18] 2025-07-23 21:55:46,835 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-23 17:56:18] 2025-07-23 21:55:46,835 | INFO     | collected zombie processes
[2025-07-23 17:56:18] 2025-07-23 21:55:46,835 | INFO     | will attempt to kill all subprocesses of pid=2416392
[2025-07-23 17:56:18] 2025-07-23 21:55:47,268 | INFO     | process IDs to be killed: [2416392] (in reverse order)
[2025-07-23 17:56:18] 2025-07-23 21:55:47,388 | WARNING  | found no corresponding commands to process id(s)
[2025-07-23 17:56:18] 2025-07-23 21:55:47,388 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-23 17:56:18] 2025-07-23 21:55:47,403 | INFO     | did not find any defunct processes belonging to 2416392
[2025-07-23 17:56:18] 2025-07-23 21:55:47,418 | INFO     | did not find any defunct processes belonging to 2416392
[2025-07-23 17:56:18] 2025-07-23 21:55:47,419 | INFO     | ready for new job
[2025-07-23 17:56:18] 2025-07-23 21:55:47,419 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-23 17:56:18] 2025-07-23 21:55:47,422 | INFO     | ***************************************
[2025-07-23 17:56:18] 2025-07-23 21:55:47,422 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-23 17:56:18] 2025-07-23 21:55:47,422 | INFO     | ***************************************
[2025-07-23 17:56:18] 2025-07-23 21:55:47,423 | INFO     | 
[2025-07-23 17:56:18] 2025-07-23 21:55:47,438 | INFO     | architecture information:
[2025-07-23 17:56:18] 2025-07-23 21:55:47,438 | INFO     | executing command: cat /etc/os-release
[2025-07-23 17:56:18] 2025-07-23 21:55:47,456 | INFO     | cat /etc/os-release:
[2025-07-23 17:56:18] NAME="CentOS Linux"
[2025-07-23 17:56:18] VERSION="7 (Core)"
[2025-07-23 17:56:18] ID="centos"
[2025-07-23 17:56:18] ID_LIKE="rhel fedora"
[2025-07-23 17:56:18] VERSION_ID="7"
[2025-07-23 17:56:18] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-23 17:56:18] ANSI_COLOR="0;31"
[2025-07-23 17:56:18] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-23 17:56:18] HOME_URL="https://www.centos.org/"
[2025-07-23 17:56:18] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-23 17:56:18] 
[2025-07-23 17:56:18] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-23 17:56:18] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-23 17:56:18] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-23 17:56:18] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-23 17:56:18] 
[2025-07-23 17:56:18] 2025-07-23 21:55:47,456 | INFO     | ***************************************
[2025-07-23 17:56:18] 2025-07-23 21:55:47,960 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-07-23 17:56:18] 2025-07-23 21:55:47,990 | INFO     | sufficient remaining disk space (76200017920 B)
[2025-07-23 17:56:18] 2025-07-23 21:55:47,991 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-23 17:56:18] 2025-07-23 21:55:47,991 | INFO     | current server update state: UPDATING_FINAL
[2025-07-23 17:56:18] 2025-07-23 21:55:47,991 | INFO     | update_server=False
[2025-07-23 17:56:18] 2025-07-23 21:55:47,991 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-23 17:56:18] 2025-07-23 21:55:47,993 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-23 17:56:18] 2025-07-23 21:55:47,993 | INFO     | aborting loop
[2025-07-23 17:56:18] 2025-07-23 21:55:47,996 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-23 17:56:18] 2025-07-23 21:55:48,014 | INFO     | all data control threads have been joined
[2025-07-23 17:56:18] 2025-07-23 21:55:48,159 | INFO     | all job control threads have been joined
[2025-07-23 17:56:18] 2025-07-23 21:55:48,726 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-23 17:56:18] 2025-07-23 21:55:48,814 | INFO     | all payload control threads have been joined
[2025-07-23 17:56:18] 2025-07-23 21:55:48,997 | INFO     | [job] retrieve thread has finished
[2025-07-23 17:56:18] 2025-07-23 21:55:48,998 | INFO     | [job] job monitor thread has finished
[2025-07-23 17:56:18] 2025-07-23 21:55:49,020 | INFO     | [data] control thread has finished
[2025-07-23 17:56:18] 2025-07-23 21:55:49,164 | INFO     | [job] control thread has finished
[2025-07-23 17:56:18] 2025-07-23 21:55:49,338 | INFO     | [payload] execute_payloads thread has finished
[2025-07-23 17:56:18] 2025-07-23 21:55:49,527 | INFO     | [job] create_data_payload thread has finished
[2025-07-23 17:56:18] 2025-07-23 21:55:49,752 | INFO     | [payload] failed_post thread has finished
[2025-07-23 17:56:18] 2025-07-23 21:55:49,809 | INFO     | [job] validate thread has finished
[2025-07-23 17:56:18] 2025-07-23 21:55:49,819 | INFO     | [payload] control thread has finished
[2025-07-23 17:56:18] 2025-07-23 21:55:49,833 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-23 17:56:18] 2025-07-23 21:55:50,001 | INFO     | [data] copytool_out thread has finished
[2025-07-23 17:56:18] 2025-07-23 21:55:50,113 | INFO     | [data] copytool_in thread has finished
[2025-07-23 17:56:18] 2025-07-23 21:55:50,263 | INFO     | [payload] validate_pre thread has finished
[2025-07-23 17:56:18] 2025-07-23 21:55:50,488 | INFO     | [payload] validate_post thread has finished
[2025-07-23 17:56:18] 2025-07-23 21:55:50,814 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-23 17:56:18] 2025-07-23 21:55:51,820 | INFO     | [job] queue monitor thread has finished
[2025-07-23 17:56:18] 2025-07-23 21:55:52,735 | INFO     | [data] queue_monitor thread has finished
[2025-07-23 17:56:18] 2025-07-23 21:55:53,818 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140143467951936)>', '<ExcThread(monitor, started 140142702491392)>']
[2025-07-23 17:56:18] 2025-07-23 21:55:58,823 | INFO     | all workflow threads have been joined
[2025-07-23 17:56:18] 2025-07-23 21:55:58,823 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-23 17:56:18] 2025-07-23 21:55:58,824 | INFO     | traces error code: 0
[2025-07-23 17:56:18] 2025-07-23 21:55:58,824 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-23 17:56:18] 2025-07-23 21:56:18,553 | INFO     | PID=2409063 has CPU usage=3.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-07-23 17:56:18] 2025-07-23 21:56:18,553 | INFO     | .. there are 34 such processes running
[2025-07-23 17:56:18] 2025-07-23 21:56:18,554 | INFO     | found 0 job(s) in 20 queues
[2025-07-23 17:56:18] 2025-07-23 21:56:18,554 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-23 17:56:18] 2025-07-23 21:56:18,554 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-23 17:56:18] 2025-07-23 21:56:18,554 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-23 17:56:18] 2025-07-23 21:56:18,554 | INFO     | [monitor] control thread has ended
[2025-07-23 17:56:18] 2025-07-23 21:56:18,741 [wrapper] ==== pilot stdout END ====
[2025-07-23 17:56:18] 2025-07-23 21:56:18,743 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-23 17:56:18] 2025-07-23 21:56:18,746 [wrapper] pilotpid: 2409063
[2025-07-23 17:56:18] 2025-07-23 21:56:18,749 [wrapper] Pilot exit status: 0
[2025-07-23 17:56:18] 2025-07-23 21:56:18,764 [wrapper] pandaids: 6741919293
[2025-07-23 17:56:18] 2025-07-23 21:56:18,833 [wrapper] cleanup supervisor_pilot 3225517 2409064
[2025-07-23 17:56:18] 2025-07-23 21:56:18,838 [wrapper] Test setup, not cleaning
[2025-07-23 17:56:18] 2025-07-23 21:56:18,841 [wrapper] apfmon messages muted
[2025-07-23 17:56:18] 2025-07-23 21:56:18,846 [wrapper] ==== wrapper stdout END ====
[2025-07-23 17:56:18] 2025-07-23 21:56:18,850 [wrapper] ==== wrapper stderr END ====
[2025-07-23 17:56:18]  *** Error codes and diagnostics ***
[2025-07-23 17:56:18]     "exeErrorCode": 0,
[2025-07-23 17:56:18]     "exeErrorDiag": "",
[2025-07-23 17:56:18]     "pilotErrorCode": 0,
[2025-07-23 17:56:18]     "pilotErrorDiag": "",
[2025-07-23 17:56:18]  *** Listing of results directory ***
[2025-07-23 17:56:18] total 596040
[2025-07-23 17:56:18] -rw-r--r--. 1 boincer umatlas    530466 Jul 23 05:49 pilot3.tar.gz
[2025-07-23 17:56:18] -rw-r--r--. 1 boincer umatlas      5112 Jul 23 06:00 queuedata.json
[2025-07-23 17:56:18] -rwx------. 1 boincer umatlas     36292 Jul 23 06:02 runpilot2-wrapper.sh
[2025-07-23 17:56:18] -rw-r--r--. 1 boincer umatlas       100 Jul 23 13:44 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-23 17:56:18] -rwxr-xr-x. 1 boincer umatlas      7986 Jul 23 13:44 run_atlas
[2025-07-23 17:56:18] -rw-r--r--. 1 boincer umatlas       105 Jul 23 13:44 job.xml
[2025-07-23 17:56:18] -rw-r--r--. 2 boincer umatlas 326869709 Jul 23 13:44 EVNT.45697470._000063.pool.root.1
[2025-07-23 17:56:18] -rw-r--r--. 2 boincer umatlas     15095 Jul 23 13:44 start_atlas.sh
[2025-07-23 17:56:18] drwxrwx--x. 2 boincer umatlas      4096 Jul 23 13:44 shared
[2025-07-23 17:56:18] -rw-r--r--. 2 boincer umatlas    542896 Jul 23 13:44 input.tar.gz
[2025-07-23 17:56:18] -rw-r--r--. 1 boincer umatlas         0 Jul 23 13:44 boinc_lockfile
[2025-07-23 17:56:18] -rw-r--r--. 1 boincer umatlas      2608 Jul 23 13:44 pandaJob.out
[2025-07-23 17:56:18] -rw-------. 1 boincer umatlas    978479 Jul 23 13:45 agis_schedconf.cvmfs.json
[2025-07-23 17:56:18] drwx------. 4 boincer umatlas      4096 Jul 23 13:45 pilot3
[2025-07-23 17:56:18] -rw-r--r--. 1 boincer umatlas      6614 Jul 23 17:48 init_data.xml
[2025-07-23 17:56:18] -rw-r--r--. 1 boincer umatlas       531 Jul 23 17:54 boinc_task_state.xml
[2025-07-23 17:56:18] -rw-------. 1 boincer umatlas 276362616 Jul 23 17:54 HITS.45697472._004976.pool.root.1
[2025-07-23 17:56:18] -rw-------. 1 boincer umatlas      1042 Jul 23 17:55 memory_monitor_summary.json
[2025-07-23 17:56:18] -rw-------. 1 boincer umatlas   1593041 Jul 23 17:55 agis_ddmendpoints.agis.ALL.json
[2025-07-23 17:56:18] -rw-------. 1 boincer umatlas    443357 Jul 23 17:55 log.45697472._004976.job.log.tgz.1
[2025-07-23 17:56:18] -rw-------. 1 boincer umatlas      7817 Jul 23 17:55 heartbeat.json
[2025-07-23 17:56:18] -rw-r--r--. 1 boincer umatlas      8192 Jul 23 17:55 boinc_mmap_file
[2025-07-23 17:56:18] -rw-r--r--. 1 boincer umatlas        28 Jul 23 17:56 wrapper_checkpoint.txt
[2025-07-23 17:56:18] -rw-------. 1 boincer umatlas        95 Jul 23 17:56 pilot_heartbeat.json
[2025-07-23 17:56:18] -rw-------. 1 boincer umatlas       823 Jul 23 17:56 pilotlog.txt
[2025-07-23 17:56:18] -rw-------. 1 boincer umatlas   1178747 Jul 23 17:56 log.45697472._004976.job.log.1
[2025-07-23 17:56:18] -rw-------. 1 boincer umatlas       357 Jul 23 17:56 output.list
[2025-07-23 17:56:18] -rw-r--r--. 1 boincer umatlas       620 Jul 23 17:56 runtime_log
[2025-07-23 17:56:18] -rw-------. 1 boincer umatlas   1638400 Jul 23 17:56 result.tar.gz
[2025-07-23 17:56:18] -rw-r--r--. 1 boincer umatlas      8653 Jul 23 17:56 runtime_log.err
[2025-07-23 17:56:18] -rw-------. 1 boincer umatlas       656 Jul 23 17:56 BetMDmJUly7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmYPLLDm9kUbUn.diag
[2025-07-23 17:56:18] -rw-r--r--. 1 boincer umatlas     21332 Jul 23 17:56 stderr.txt
[2025-07-23 17:56:18] HITS file was successfully produced:
[2025-07-23 17:56:18] -rw-------. 1 boincer umatlas 276362616 Jul 23 17:54 shared/HITS.pool.root.1
[2025-07-23 17:56:18]  *** Contents of shared directory: ***
[2025-07-23 17:56:18] total 591252
[2025-07-23 17:56:18] -rw-r--r--. 2 boincer umatlas 326869709 Jul 23 13:44 ATLAS.root_0
[2025-07-23 17:56:18] -rw-r--r--. 2 boincer umatlas     15095 Jul 23 13:44 start_atlas.sh
[2025-07-23 17:56:18] -rw-r--r--. 2 boincer umatlas    542896 Jul 23 13:44 input.tar.gz
[2025-07-23 17:56:18] -rw-------. 1 boincer umatlas 276362616 Jul 23 17:54 HITS.pool.root.1
[2025-07-23 17:56:18] -rw-------. 1 boincer umatlas   1638400 Jul 23 17:56 result.tar.gz
17:56:19 (2404748): run_atlas exited; CPU time 81359.295414
17:56:19 (2404748): called boinc_finish(0)

</stderr_txt>
]]>

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