Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
13:24:04 (21687): wrapper (7.7.26015): starting
13:24:04 (21687): wrapper: running run_atlas (--nthreads 4)
[2025-07-23 13:24:04] Arguments: --nthreads 4
[2025-07-23 13:24:04] Threads: 4
[2025-07-23 13:24:04] Checking for CVMFS
[2025-07-23 13:24:04] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-23 13:24:04] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-23 13:24:04] Running cvmfs_config stat atlas.cern.ch
[2025-07-23 13:24:04] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-23 13:24:04] 2.11.2.0 26179 520596 96372 148666 0 56 13771342 20275200 1 130560 0 61141656 99.975 22566057 20732 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-07-23 13:24:04] CVMFS is ok
[2025-07-23 13:24:04] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-07-23 13:24:04] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-07-23 13:24:04] Further information can be found at the LHC@home message board.
[2025-07-23 13:24:04] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-23 13:24:04] Checking for apptainer binary...
[2025-07-23 13:24:04] Using apptainer found in PATH at /usr/bin/apptainer
[2025-07-23 13:24:04] Running /usr/bin/apptainer --version
[2025-07-23 13:24:04] apptainer version 1.3.2-1.el7
[2025-07-23 13:24:04] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-23 13:24:04] c-205-33.aglt2.org
[2025-07-23 13:24:04] apptainer works
[2025-07-23 13:24:04] Set ATHENA_PROC_NUMBER=4
[2025-07-23 13:24:04] Set ATHENA_CORE_NUMBER=4
[2025-07-23 13:24:04] Starting ATLAS job with PandaID=6741891412
[2025-07-23 13:24:04] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-23 16:08:25]  *** The last 200 lines of the pilot log: ***
[2025-07-23 16:08:25] 2025-07-23 20:07:50,368 | INFO     | total number of processed events: 400 (read)
[2025-07-23 16:08:25] 2025-07-23 20:07:50,369 | INFO     | executing command: lscpu
[2025-07-23 16:08:25] 2025-07-23 20:07:50,399 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-07-23 16:08:25] 2025-07-23 20:07:51,373 | INFO     | monitor loop #735: job 0:6741891412 is in state 'finished'
[2025-07-23 16:08:25] 2025-07-23 20:07:51,373 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-23 16:08:25] 2025-07-23 20:07:53,350 | INFO     | CPU arch script returned: x86-64-v3
[2025-07-23 16:08:25] 2025-07-23 20:07:53,351 | INFO     | found 4 cores (4 cores per socket, 1 socket) , CPU MHz: 3640.04475
[2025-07-23 16:08:25] 2025-07-23 20:07:53,351 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6741891412/memory_monitor_summary.json (trf name=prmon)
[2025-07-23 16:08:25] 2025-07-23 20:07:53,352 | INFO     | extracted standard info from prmon json
[2025-07-23 16:08:25] 2025-07-23 20:07:53,352 | INFO     | extracted standard memory fields from prmon json
[2025-07-23 16:08:25] 2025-07-23 20:07:53,352 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-23 16:08:25] 2025-07-23 20:07:53,352 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-23 16:08:25] 2025-07-23 20:07:53,352 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-23 16:08:25] 2025-07-23 20:07:53,353 | INFO     | fitting pss+swap vs Time
[2025-07-23 16:08:25] 2025-07-23 20:07:53,353 | INFO     | sum of square deviations: 1294014960.0
[2025-07-23 16:08:25] 2025-07-23 20:07:53,354 | INFO     | sum of deviations: -25734049138.0
[2025-07-23 16:08:25] 2025-07-23 20:07:53,354 | INFO     | mean x: 1753296354.0
[2025-07-23 16:08:25] 2025-07-23 20:07:53,354 | INFO     | mean y: 2405949.1428571427
[2025-07-23 16:08:25] 2025-07-23 20:07:53,354 | INFO     | -- intersect: 34870174809.64525
[2025-07-23 16:08:25] 2025-07-23 20:07:53,354 | INFO     | intersect: 34870174809.64525
[2025-07-23 16:08:25] 2025-07-23 20:07:53,354 | INFO     | chi2: 1.4411075058196268
[2025-07-23 16:08:25] 2025-07-23 20:07:53,354 | INFO     | sum of square deviations: 1177156955.0
[2025-07-23 16:08:25] 2025-07-23 20:07:53,355 | INFO     | sum of deviations: -19622736901.499996
[2025-07-23 16:08:25] 2025-07-23 20:07:53,355 | INFO     | mean x: 1753296201.5
[2025-07-23 16:08:25] 2025-07-23 20:07:53,355 | INFO     | mean y: 2413758.3397435895
[2025-07-23 16:08:25] 2025-07-23 20:07:53,355 | INFO     | -- intersect: 29229162091.51663
[2025-07-23 16:08:25] 2025-07-23 20:07:53,355 | INFO     | intersect: 29229162091.51663
[2025-07-23 16:08:25] 2025-07-23 20:07:53,355 | INFO     | chi2: 1.259457263814489
[2025-07-23 16:08:25] 2025-07-23 20:07:53,355 | INFO     | current chi2=1.259457263814489 (change=12.604905690351298 %)
[2025-07-23 16:08:25] 2025-07-23 20:07:53,355 | INFO     | right removable region: 155
[2025-07-23 16:08:25] 2025-07-23 20:07:53,355 | INFO     | sum of square deviations: 1177156955.0
[2025-07-23 16:08:25] 2025-07-23 20:07:53,355 | INFO     | sum of deviations: -38974179840.999985
[2025-07-23 16:08:25] 2025-07-23 20:07:53,355 | INFO     | mean x: 1753296506.5
[2025-07-23 16:08:25] 2025-07-23 20:07:53,355 | INFO     | mean y: 2422786.628205128
[2025-07-23 16:08:25] 2025-07-23 20:07:53,356 | INFO     | -- intersect: 58051855420.63749
[2025-07-23 16:08:25] 2025-07-23 20:07:53,356 | INFO     | intersect: 58051855420.63749
[2025-07-23 16:08:25] 2025-07-23 20:07:53,356 | INFO     | chi2: 0.3549050131319859
[2025-07-23 16:08:25] 2025-07-23 20:07:53,356 | INFO     | current chi2=0.3549050131319859 (change=75.37275937438585 %)
[2025-07-23 16:08:25] 2025-07-23 20:07:53,356 | INFO     | sum of square deviations: 1067554900.0
[2025-07-23 16:08:25] 2025-07-23 20:07:53,356 | INFO     | sum of deviations: -34712260572.0
[2025-07-23 16:08:25] 2025-07-23 20:07:53,356 | INFO     | mean x: 1753296659.0
[2025-07-23 16:08:25] 2025-07-23 20:07:53,356 | INFO     | mean y: 2416848.0066225166
[2025-07-23 16:08:25] 2025-07-23 20:07:53,356 | INFO     | -- intersect: 57012028707.05483
[2025-07-23 16:08:25] 2025-07-23 20:07:53,356 | INFO     | intersect: 57012028707.05483
[2025-07-23 16:08:25] 2025-07-23 20:07:53,356 | INFO     | chi2: 0.35384926721328047
[2025-07-23 16:08:25] 2025-07-23 20:07:53,357 | INFO     | current chi2=0.35384926721328047 (change=0.29747281093288463 %)
[2025-07-23 16:08:25] 2025-07-23 20:07:53,357 | INFO     | left removable region: 20
[2025-07-23 16:08:25] 2025-07-23 20:07:53,357 | INFO     | sum of square deviations: 762879420.0
[2025-07-23 16:08:25] 2025-07-23 20:07:53,357 | INFO     | sum of deviations: -19180893558.000004
[2025-07-23 16:08:25] 2025-07-23 20:07:53,357 | INFO     | mean x: 1753296781.0
[2025-07-23 16:08:25] 2025-07-23 20:07:53,357 | INFO     | mean y: 2410302.8814814813
[2025-07-23 16:08:25] 2025-07-23 20:07:53,357 | INFO     | -- intersect: 44085129078.9956
[2025-07-23 16:08:25] 2025-07-23 20:07:53,357 | INFO     | intersect: 44085129078.9956
[2025-07-23 16:08:25] 2025-07-23 20:07:53,357 | INFO     | chi2: 0.15005441149506007
[2025-07-23 16:08:25] 2025-07-23 20:07:53,357 | INFO     | -- intersect: 44085129078.9956
[2025-07-23 16:08:25] 2025-07-23 20:07:53,357 | INFO     | current memory leak: -25.14 B/s (using 135 data points, chi2=0.15)
[2025-07-23 16:08:25] 2025-07-23 20:07:53,358 | INFO     | could have reported an average CPU frequency of 3287 MHz (9 samples)
[2025-07-23 16:08:25] 2025-07-23 20:07:53,358 | INFO     | ..............................
[2025-07-23 16:08:25] 2025-07-23 20:07:53,358 | INFO     | . Timing measurements:
[2025-07-23 16:08:25] 2025-07-23 20:07:53,358 | INFO     | . get job = 0 s
[2025-07-23 16:08:25] 2025-07-23 20:07:53,358 | INFO     | . initial setup = 1 s
[2025-07-23 16:08:25] 2025-07-23 20:07:53,358 | INFO     | . payload setup = 4 s
[2025-07-23 16:08:25] 2025-07-23 20:07:53,358 | INFO     | . stage-in = 0 s
[2025-07-23 16:08:25] 2025-07-23 20:07:53,358 | INFO     | . payload execution = 9788 s
[2025-07-23 16:08:25] 2025-07-23 20:07:53,358 | INFO     | . stage-out = 0 s
[2025-07-23 16:08:25] 2025-07-23 20:07:53,358 | INFO     | . log creation = 0 s
[2025-07-23 16:08:25] 2025-07-23 20:07:53,358 | INFO     | ..............................
[2025-07-23 16:08:25] 2025-07-23 20:07:53,689 | INFO     | 
[2025-07-23 16:08:25] 2025-07-23 20:07:53,689 | INFO     | job summary report
[2025-07-23 16:08:25] 2025-07-23 20:07:53,689 | INFO     | --------------------------------------------------
[2025-07-23 16:08:25] 2025-07-23 20:07:53,689 | INFO     | PanDA job id: 6741891412
[2025-07-23 16:08:25] 2025-07-23 20:07:53,690 | INFO     | task id: 45697490
[2025-07-23 16:08:25] 2025-07-23 20:07:53,690 | INFO     | errors: (none)
[2025-07-23 16:08:25] 2025-07-23 20:07:53,690 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-23 16:08:25] 2025-07-23 20:07:53,690 | INFO     | pilot state: finished 
[2025-07-23 16:08:25] 2025-07-23 20:07:53,690 | INFO     | transexitcode: 0
[2025-07-23 16:08:25] 2025-07-23 20:07:53,690 | INFO     | exeerrorcode: 0
[2025-07-23 16:08:25] 2025-07-23 20:07:53,690 | INFO     | exeerrordiag: 
[2025-07-23 16:08:25] 2025-07-23 20:07:53,691 | INFO     | exitcode: 0
[2025-07-23 16:08:25] 2025-07-23 20:07:53,691 | INFO     | exitmsg: OK
[2025-07-23 16:08:25] 2025-07-23 20:07:53,691 | INFO     | cpuconsumptiontime: 38087 s
[2025-07-23 16:08:25] 2025-07-23 20:07:53,691 | INFO     | nevents: 400
[2025-07-23 16:08:25] 2025-07-23 20:07:53,691 | INFO     | neventsw: 0
[2025-07-23 16:08:25] 2025-07-23 20:07:53,691 | INFO     | pid: 31658
[2025-07-23 16:08:25] 2025-07-23 20:07:53,691 | INFO     | pgrp: 31658
[2025-07-23 16:08:25] 2025-07-23 20:07:53,691 | INFO     | corecount: 4
[2025-07-23 16:08:25] 2025-07-23 20:07:53,691 | INFO     | event service: False
[2025-07-23 16:08:25] 2025-07-23 20:07:53,691 | INFO     | sizes: {0: 2397504, 3: 2397766, 11: 2397794, 9797: 2426473, 9798: 2426472, 9799: 2435526, 9802: 2435710, 9808: 2435968}
[2025-07-23 16:08:25] 2025-07-23 20:07:53,692 | INFO     | --------------------------------------------------
[2025-07-23 16:08:25] 2025-07-23 20:07:53,692 | INFO     | 
[2025-07-23 16:08:25] 2025-07-23 20:07:53,692 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-07-23 16:08:25] 2025-07-23 20:07:53,703 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-23 16:08:25] 2025-07-23 20:07:53,703 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-23 16:08:25] 2025-07-23 20:07:53,703 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-23 16:08:25] 2025-07-23 20:07:53,703 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-23 16:08:25] 2025-07-23 20:07:53,704 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-23 16:08:25] 2025-07-23 20:07:53,704 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-23 16:08:25] 2025-07-23 20:07:53,704 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-23 16:08:25] 2025-07-23 20:07:53,704 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-23 16:08:25] 2025-07-23 20:07:53,704 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-23 16:08:25] 2025-07-23 20:07:53,704 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-23 16:08:25] 2025-07-23 20:07:53,704 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-23 16:08:25] 2025-07-23 20:07:53,704 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-23 16:08:25] 2025-07-23 20:07:53,704 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-23 16:08:25] 2025-07-23 20:07:53,704 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-23 16:08:25] 2025-07-23 20:07:53,704 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-23 16:08:25] 2025-07-23 20:07:53,704 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-23 16:08:25] 2025-07-23 20:07:53,704 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-23 16:08:25] 2025-07-23 20:07:53,704 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-23 16:08:25] 2025-07-23 20:07:53,704 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-23 16:08:25] 2025-07-23 20:07:53,704 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-23 16:08:25] 2025-07-23 20:07:53,704 | INFO     | job 6741891412 has completed (purged errors)
[2025-07-23 16:08:25] 2025-07-23 20:07:53,704 | INFO     | overall cleanup function is called
[2025-07-23 16:08:25] 2025-07-23 20:07:54,711 | INFO     | --- collectZombieJob: --- 10, [31658]
[2025-07-23 16:08:25] 2025-07-23 20:07:54,711 | INFO     | zombie collector waiting for pid 31658
[2025-07-23 16:08:25] 2025-07-23 20:07:54,711 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-23 16:08:25] 2025-07-23 20:07:54,711 | INFO     | collected zombie processes
[2025-07-23 16:08:25] 2025-07-23 20:07:54,711 | INFO     | will attempt to kill all subprocesses of pid=31658
[2025-07-23 16:08:25] 2025-07-23 20:07:54,744 | INFO     | process IDs to be killed: [31658] (in reverse order)
[2025-07-23 16:08:25] 2025-07-23 20:07:54,766 | WARNING  | found no corresponding commands to process id(s)
[2025-07-23 16:08:25] 2025-07-23 20:07:54,766 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-23 16:08:25] 2025-07-23 20:07:54,767 | INFO     | did not find any defunct processes belonging to 31658
[2025-07-23 16:08:25] 2025-07-23 20:07:54,768 | INFO     | did not find any defunct processes belonging to 31658
[2025-07-23 16:08:25] 2025-07-23 20:07:54,768 | INFO     | ready for new job
[2025-07-23 16:08:25] 2025-07-23 20:07:54,768 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-23 16:08:25] 2025-07-23 20:07:54,769 | INFO     | ***************************************
[2025-07-23 16:08:25] 2025-07-23 20:07:54,769 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-23 16:08:25] 2025-07-23 20:07:54,769 | INFO     | ***************************************
[2025-07-23 16:08:25] 2025-07-23 20:07:54,769 | INFO     | 
[2025-07-23 16:08:25] 2025-07-23 20:07:54,770 | INFO     | architecture information:
[2025-07-23 16:08:25] 2025-07-23 20:07:54,770 | INFO     | executing command: cat /etc/os-release
[2025-07-23 16:08:25] 2025-07-23 20:07:54,777 | INFO     | cat /etc/os-release:
[2025-07-23 16:08:25] NAME="CentOS Linux"
[2025-07-23 16:08:25] VERSION="7 (Core)"
[2025-07-23 16:08:25] ID="centos"
[2025-07-23 16:08:25] ID_LIKE="rhel fedora"
[2025-07-23 16:08:25] VERSION_ID="7"
[2025-07-23 16:08:25] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-23 16:08:25] ANSI_COLOR="0;31"
[2025-07-23 16:08:25] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-23 16:08:25] HOME_URL="https://www.centos.org/"
[2025-07-23 16:08:25] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-23 16:08:25] 
[2025-07-23 16:08:25] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-23 16:08:25] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-23 16:08:25] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-23 16:08:25] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-23 16:08:25] 
[2025-07-23 16:08:25] 2025-07-23 20:07:54,777 | INFO     | ***************************************
[2025-07-23 16:08:25] 2025-07-23 20:07:55,280 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-07-23 16:08:25] 2025-07-23 20:07:55,291 | INFO     | sufficient remaining disk space (18248368128 B)
[2025-07-23 16:08:25] 2025-07-23 20:07:55,291 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-23 16:08:25] 2025-07-23 20:07:55,291 | INFO     | current server update state: UPDATING_FINAL
[2025-07-23 16:08:25] 2025-07-23 20:07:55,291 | INFO     | update_server=False
[2025-07-23 16:08:25] 2025-07-23 20:07:55,291 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-23 16:08:25] 2025-07-23 20:07:55,291 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-23 16:08:25] 2025-07-23 20:07:55,291 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-23 16:08:25] 2025-07-23 20:07:55,292 | INFO     | aborting loop
[2025-07-23 16:08:25] 2025-07-23 20:07:55,648 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-23 16:08:25] 2025-07-23 20:07:55,689 | INFO     | all data control threads have been joined
[2025-07-23 16:08:25] 2025-07-23 20:07:55,899 | INFO     | all payload control threads have been joined
[2025-07-23 16:08:25] 2025-07-23 20:07:56,296 | INFO     | [job] job monitor thread has finished
[2025-07-23 16:08:25] 2025-07-23 20:07:56,296 | INFO     | [job] queue monitor thread has finished
[2025-07-23 16:08:25] 2025-07-23 20:07:56,297 | INFO     | [job] retrieve thread has finished
[2025-07-23 16:08:25] 2025-07-23 20:07:56,352 | INFO     | [job] validate thread has finished
[2025-07-23 16:08:25] 2025-07-23 20:07:56,359 | INFO     | [job] create_data_payload thread has finished
[2025-07-23 16:08:25] 2025-07-23 20:07:56,370 | INFO     | [payload] validate_pre thread has finished
[2025-07-23 16:08:25] 2025-07-23 20:07:56,399 | INFO     | [payload] failed_post thread has finished
[2025-07-23 16:08:25] 2025-07-23 20:07:56,461 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-23 16:08:25] 2025-07-23 20:07:56,693 | INFO     | [data] control thread has finished
[2025-07-23 16:08:25] 2025-07-23 20:07:56,829 | INFO     | all job control threads have been joined
[2025-07-23 16:08:25] 2025-07-23 20:07:56,904 | INFO     | [payload] control thread has finished
[2025-07-23 16:08:25] 2025-07-23 20:07:57,197 | INFO     | [payload] validate_post thread has finished
[2025-07-23 16:08:25] 2025-07-23 20:07:57,397 | INFO     | [data] copytool_in thread has finished
[2025-07-23 16:08:25] 2025-07-23 20:07:57,412 | INFO     | [payload] execute_payloads thread has finished
[2025-07-23 16:08:25] 2025-07-23 20:07:57,654 | INFO     | [data] copytool_out thread has finished
[2025-07-23 16:08:25] 2025-07-23 20:07:57,835 | INFO     | [job] control thread has finished
[2025-07-23 16:08:25] 2025-07-23 20:07:58,715 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-23 16:08:25] 2025-07-23 20:08:02,721 | INFO     | [data] queue_monitor thread has finished
[2025-07-23 16:08:25] 2025-07-23 20:08:02,852 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140066568959808)>', '<ExcThread(monitor, started 140066341824256)>']
[2025-07-23 16:08:25] 2025-07-23 20:08:07,866 | INFO     | all workflow threads have been joined
[2025-07-23 16:08:25] 2025-07-23 20:08:07,881 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-23 16:08:25] 2025-07-23 20:08:07,882 | INFO     | traces error code: 0
[2025-07-23 16:08:25] 2025-07-23 20:08:07,882 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-23 16:08:25] 2025-07-23 20:08:24,994 | INFO     | PID=25258 has CPU usage=2.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-07-23 16:08:25] 2025-07-23 20:08:24,994 | INFO     | found 0 job(s) in 20 queues
[2025-07-23 16:08:25] 2025-07-23 20:08:24,994 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-23 16:08:25] 2025-07-23 20:08:24,994 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-23 16:08:25] 2025-07-23 20:08:24,994 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-23 16:08:25] 2025-07-23 20:08:24,995 | INFO     | [monitor] control thread has ended
[2025-07-23 16:08:25] 2025-07-23 20:08:25,055 [wrapper] ==== pilot stdout END ====
[2025-07-23 16:08:25] 2025-07-23 20:08:25,057 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-23 16:08:25] 2025-07-23 20:08:25,059 [wrapper] pilotpid: 25258
[2025-07-23 16:08:25] 2025-07-23 20:08:25,061 [wrapper] Pilot exit status: 0
[2025-07-23 16:08:25] 2025-07-23 20:08:25,067 [wrapper] pandaids: 6741891412
[2025-07-23 16:08:25] 2025-07-23 20:08:25,081 [wrapper] cleanup supervisor_pilot 12800 25259
[2025-07-23 16:08:25] 2025-07-23 20:08:25,083 [wrapper] Test setup, not cleaning
[2025-07-23 16:08:25] 2025-07-23 20:08:25,085 [wrapper] apfmon messages muted
[2025-07-23 16:08:25] 2025-07-23 20:08:25,087 [wrapper] ==== wrapper stdout END ====
[2025-07-23 16:08:25] 2025-07-23 20:08:25,088 [wrapper] ==== wrapper stderr END ====
[2025-07-23 16:08:25]  *** Error codes and diagnostics ***
[2025-07-23 16:08:25]     "exeErrorCode": 0,
[2025-07-23 16:08:25]     "exeErrorDiag": "",
[2025-07-23 16:08:25]     "pilotErrorCode": 0,
[2025-07-23 16:08:25]     "pilotErrorDiag": "",
[2025-07-23 16:08:25]  *** Listing of results directory ***
[2025-07-23 16:08:25] total 638956
[2025-07-23 16:08:25] -rw-r--r-- 1 boincer umatlas    530466 Jul 23 05:49 pilot3.tar.gz
[2025-07-23 16:08:25] -rw-r--r-- 1 boincer umatlas      5112 Jul 23 05:54 queuedata.json
[2025-07-23 16:08:25] -rwx------ 1 boincer umatlas     36292 Jul 23 05:54 runpilot2-wrapper.sh
[2025-07-23 16:08:25] -rw-r--r-- 1 boincer umatlas       100 Jul 23 13:24 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-23 16:08:25] -rwxr-xr-x 1 boincer umatlas      7986 Jul 23 13:24 run_atlas
[2025-07-23 16:08:25] -rw-r--r-- 1 boincer umatlas       105 Jul 23 13:24 job.xml
[2025-07-23 16:08:25] -rw-r--r-- 2 boincer umatlas     15095 Jul 23 13:24 start_atlas.sh
[2025-07-23 16:08:25] drwxrwx--x 2 boincer umatlas      4096 Jul 23 13:24 shared
[2025-07-23 16:08:25] -rw-r--r-- 2 boincer umatlas    542903 Jul 23 13:24 input.tar.gz
[2025-07-23 16:08:25] -rw-r--r-- 2 boincer umatlas 345075491 Jul 23 13:24 EVNT.45697488._000226.pool.root.1
[2025-07-23 16:08:25] -rw-r--r-- 1 boincer umatlas         0 Jul 23 13:24 boinc_lockfile
[2025-07-23 16:08:25] -rw-r--r-- 1 boincer umatlas      2590 Jul 23 13:24 pandaJob.out
[2025-07-23 16:08:25] -rw------- 1 boincer umatlas    978479 Jul 23 13:24 agis_schedconf.cvmfs.json
[2025-07-23 16:08:25] -rw------- 1 boincer umatlas   1593041 Jul 23 13:24 agis_ddmendpoints.agis.ALL.json
[2025-07-23 16:08:25] drwx------ 4 boincer umatlas      4096 Jul 23 13:24 pilot3
[2025-07-23 16:08:25] -rw-r--r-- 1 boincer umatlas      6154 Jul 23 16:02 init_data.xml
[2025-07-23 16:08:25] -rw------- 1 boincer umatlas 302977167 Jul 23 16:07 HITS.45697490._005106.pool.root.1
[2025-07-23 16:08:25] -rw------- 1 boincer umatlas        95 Jul 23 16:07 pilot_heartbeat.json
[2025-07-23 16:08:25] -rw-r--r-- 1 boincer umatlas       530 Jul 23 16:07 boinc_task_state.xml
[2025-07-23 16:08:25] -rw------- 1 boincer umatlas      1044 Jul 23 16:07 memory_monitor_summary.json
[2025-07-23 16:08:25] -rw------- 1 boincer umatlas    284809 Jul 23 16:07 log.45697490._005106.job.log.tgz.1
[2025-07-23 16:08:25] -rw------- 1 boincer umatlas      7830 Jul 23 16:07 heartbeat.json
[2025-07-23 16:08:25] -rw-r--r-- 1 boincer umatlas      8192 Jul 23 16:08 boinc_mmap_file
[2025-07-23 16:08:25] -rw-r--r-- 1 boincer umatlas        27 Jul 23 16:08 wrapper_checkpoint.txt
[2025-07-23 16:08:25] -rw------- 1 boincer umatlas       745 Jul 23 16:08 pilotlog.txt
[2025-07-23 16:08:25] -rw------- 1 boincer umatlas    897642 Jul 23 16:08 log.45697490._005106.job.log.1
[2025-07-23 16:08:25] -rw------- 1 boincer umatlas       357 Jul 23 16:08 output.list
[2025-07-23 16:08:25] -rw-r--r-- 1 boincer umatlas       620 Jul 23 16:08 runtime_log
[2025-07-23 16:08:25] -rw------- 1 boincer umatlas   1198080 Jul 23 16:08 result.tar.gz
[2025-07-23 16:08:25] -rw------- 1 boincer umatlas       657 Jul 23 16:08 tWeKDmVMly7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmgOLLDmW5y2mn.diag
[2025-07-23 16:08:25] -rw-r--r-- 1 boincer umatlas      8660 Jul 23 16:08 runtime_log.err
[2025-07-23 16:08:25] -rw-r--r-- 1 boincer umatlas     21189 Jul 23 16:08 stderr.txt
[2025-07-23 16:08:25] HITS file was successfully produced:
[2025-07-23 16:08:25] -rw------- 1 boincer umatlas 302977167 Jul 23 16:07 shared/HITS.pool.root.1
[2025-07-23 16:08:25]  *** Contents of shared directory: ***
[2025-07-23 16:08:25] total 634596
[2025-07-23 16:08:25] -rw-r--r-- 2 boincer umatlas     15095 Jul 23 13:24 start_atlas.sh
[2025-07-23 16:08:25] -rw-r--r-- 2 boincer umatlas    542903 Jul 23 13:24 input.tar.gz
[2025-07-23 16:08:25] -rw-r--r-- 2 boincer umatlas 345075491 Jul 23 13:24 ATLAS.root_0
[2025-07-23 16:08:25] -rw------- 1 boincer umatlas 302977167 Jul 23 16:07 HITS.pool.root.1
[2025-07-23 16:08:25] -rw------- 1 boincer umatlas   1198080 Jul 23 16:08 result.tar.gz
16:08:26 (21687): run_atlas exited; CPU time 38109.162763
16:08:26 (21687): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN