Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
13:05:32 (2465619): wrapper (7.7.26015): starting
13:05:32 (2465619): wrapper: running run_atlas (--nthreads 8)
[2025-07-23 13:05:32] Arguments: --nthreads 8
[2025-07-23 13:05:32] Threads: 8
[2025-07-23 13:05:32] Checking for CVMFS
[2025-07-23 13:05:32] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-23 13:05:32] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-23 13:05:32] Running cvmfs_config stat atlas.cern.ch
[2025-07-23 13:05:32] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-23 13:05:32] 2.13.1.0 285388 2892 88804 148665 3 188 9483887 40960001 10548 16776704 0 36950153 99.997 132135 20626 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-07-23 13:05:32] CVMFS is ok
[2025-07-23 13:05:32] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-07-23 13:05:32] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-07-23 13:05:32] Further information can be found at the LHC@home message board.
[2025-07-23 13:05:32] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-23 13:05:32] Checking for apptainer binary...
[2025-07-23 13:05:32] Using apptainer found in PATH at /usr/bin/apptainer
[2025-07-23 13:05:32] Running /usr/bin/apptainer --version
[2025-07-23 13:05:32] apptainer version 1.4.1-1.el9
[2025-07-23 13:05:32] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-23 13:05:32] c-208-36.aglt2.org
[2025-07-23 13:05:32] apptainer works
[2025-07-23 13:05:32] Set ATHENA_PROC_NUMBER=8
[2025-07-23 13:05:32] Set ATHENA_CORE_NUMBER=8
[2025-07-23 13:05:33] Starting ATLAS job with PandaID=6743008321
[2025-07-23 13:05:33] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/6 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-23 14:24:29]  *** The last 200 lines of the pilot log: ***
[2025-07-23 14:24:29]  mtime=0
[2025-07-23 14:24:29]  protocol_id=None
[2025-07-23 14:24:29]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-07-23 14:24:29]  replicas=None
[2025-07-23 14:24:29]  scope=mc23_13p6TeV
[2025-07-23 14:24:29]  status=None
[2025-07-23 14:24:29]  status_code=0
[2025-07-23 14:24:29]  storage_token=
[2025-07-23 14:24:29]  surl=/tmp/boinchome/slots/6/PanDA_Pilot-6743008321/log.45697541._005258.job.log.tgz.1
[2025-07-23 14:24:29]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/e9/00/log.45697541._005258.job.log.tgz.1
[2025-07-23 14:24:29]  workdir=None
[2025-07-23 14:24:29] ]
[2025-07-23 14:24:29] 2025-07-23 18:23:48,924 | INFO     | transferring file log.45697541._005258.job.log.tgz.1 from /tmp/boinchome/slots/6/PanDA_Pilot-6743008321/log.45697541._005258.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-07-23 14:24:29] 2025-07-23 18:23:48,924 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/6/PanDA_Pilot-6743008321/log.45697541._005258.job.log.tgz.1 /tmp/boinchome/slots/6/log.45697541._005258.job
[2025-07-23 14:24:29] 2025-07-23 18:23:48,943 | INFO     | adding to output.list: log.45697541._005258.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/e9/00/log.45697541._005258.job.log.tg
[2025-07-23 14:24:29] 2025-07-23 18:23:48,944 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-07-23 14:24:29] 2025-07-23 18:23:48,944 | INFO     | summary of transferred files:
[2025-07-23 14:24:29] 2025-07-23 18:23:48,944 | INFO     |  -- lfn=log.45697541._005258.job.log.tgz.1, status_code=0, status=transferred
[2025-07-23 14:24:29] 2025-07-23 18:23:48,944 | INFO     | stage-out finished correctly
[2025-07-23 14:24:29] 2025-07-23 18:23:49,693 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-07-23 14:24:29] 2025-07-23 18:23:51,396 | WARNING  | process 2476910 can no longer be monitored (due to stat problems) - aborting
[2025-07-23 14:24:29] 2025-07-23 18:23:51,396 | INFO     | using path: /tmp/boinchome/slots/6/PanDA_Pilot-6743008321/memory_monitor_summary.json (trf name=prmon)
[2025-07-23 14:24:29] 2025-07-23 18:23:51,719 | INFO     | number of running child processes to parent process 2476910: 1
[2025-07-23 14:24:29] 2025-07-23 18:23:51,719 | INFO     | maximum number of monitored processes: 6
[2025-07-23 14:24:29] 2025-07-23 18:23:52,404 | INFO     | job 6743008321 has state=finished
[2025-07-23 14:24:29] 2025-07-23 18:23:52,404 | INFO     | preparing for final server update for job 6743008321 in state='finished'
[2025-07-23 14:24:29] 2025-07-23 18:23:52,405 | INFO     | this job has now completed (state=finished)
[2025-07-23 14:24:29] 2025-07-23 18:23:52,405 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-07-23 14:24:29] 2025-07-23 18:23:52,405 | INFO     | log transfer has been attempted: DONE
[2025-07-23 14:24:29] 2025-07-23 18:23:52,405 | INFO     | job 6743008321 has finished - writing final server update
[2025-07-23 14:24:29] 2025-07-23 18:23:52,405 | INFO     | total number of processed events: 400 (read)
[2025-07-23 14:24:29] 2025-07-23 18:23:52,406 | INFO     | executing command: lscpu
[2025-07-23 14:24:29] 2025-07-23 18:23:52,459 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-07-23 14:24:29] 2025-07-23 18:23:54,222 | INFO     | monitor loop #347: job 0:6743008321 is in state 'finished'
[2025-07-23 14:24:29] 2025-07-23 18:23:54,223 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-23 14:24:29] 2025-07-23 18:23:55,801 | INFO     | CPU arch script returned: x86-64-v4
[2025-07-23 14:24:29] 2025-07-23 18:23:55,806 | INFO     | found 64 cores (32 cores per socket, 2 sockets) HT, CPU MHz: 3739.557671874998
[2025-07-23 14:24:29] 2025-07-23 18:23:55,818 | INFO     | using path: /tmp/boinchome/slots/6/PanDA_Pilot-6743008321/memory_monitor_summary.json (trf name=prmon)
[2025-07-23 14:24:29] 2025-07-23 18:23:55,819 | INFO     | extracted standard info from prmon json
[2025-07-23 14:24:29] 2025-07-23 18:23:55,819 | INFO     | extracted standard memory fields from prmon json
[2025-07-23 14:24:29] 2025-07-23 18:23:55,819 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-23 14:24:29] 2025-07-23 18:23:55,819 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-23 14:24:29] 2025-07-23 18:23:55,819 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-23 14:24:29] 2025-07-23 18:23:55,820 | INFO     | fitting pss+swap vs Time
[2025-07-23 14:24:29] 2025-07-23 18:23:55,820 | INFO     | sum of square deviations: 106336877.5
[2025-07-23 14:24:29] 2025-07-23 18:23:55,821 | INFO     | sum of deviations: 668758067.0
[2025-07-23 14:24:29] 2025-07-23 18:23:55,821 | INFO     | mean x: 1753292772.5
[2025-07-23 14:24:29] 2025-07-23 18:23:55,821 | INFO     | mean y: 2578429.3714285716
[2025-07-23 14:24:29] 2025-07-23 18:23:55,821 | INFO     | -- intersect: -11023969584.718704
[2025-07-23 14:24:29] 2025-07-23 18:23:55,821 | INFO     | intersect: -11023969584.718704
[2025-07-23 14:24:29] 2025-07-23 18:23:55,821 | INFO     | chi2: 0.0007145025574213489
[2025-07-23 14:24:29] 2025-07-23 18:23:55,821 | INFO     | -- intersect: -11023969584.718704
[2025-07-23 14:24:29] 2025-07-23 18:23:55,821 | INFO     | current memory leak: 6.29 B/s (using 70 data points, chi2=0.00)
[2025-07-23 14:24:29] 2025-07-23 18:23:55,821 | INFO     | could have reported an average CPU frequency of 3744 MHz (6 samples)
[2025-07-23 14:24:29] 2025-07-23 18:23:55,821 | INFO     | ..............................
[2025-07-23 14:24:29] 2025-07-23 18:23:55,821 | INFO     | . Timing measurements:
[2025-07-23 14:24:29] 2025-07-23 18:23:55,821 | INFO     | . get job = 0 s
[2025-07-23 14:24:29] 2025-07-23 18:23:55,821 | INFO     | . initial setup = 2 s
[2025-07-23 14:24:29] 2025-07-23 18:23:55,822 | INFO     | . payload setup = 4 s
[2025-07-23 14:24:29] 2025-07-23 18:23:55,822 | INFO     | . stage-in = 0 s
[2025-07-23 14:24:29] 2025-07-23 18:23:55,822 | INFO     | . payload execution = 4664 s
[2025-07-23 14:24:29] 2025-07-23 18:23:55,822 | INFO     | . stage-out = 0 s
[2025-07-23 14:24:29] 2025-07-23 18:23:55,822 | INFO     | . log creation = 0 s
[2025-07-23 14:24:29] 2025-07-23 18:23:55,822 | INFO     | ..............................
[2025-07-23 14:24:29] 2025-07-23 18:23:55,877 | INFO     | 
[2025-07-23 14:24:29] 2025-07-23 18:23:55,878 | INFO     | job summary report
[2025-07-23 14:24:29] 2025-07-23 18:23:55,878 | INFO     | --------------------------------------------------
[2025-07-23 14:24:29] 2025-07-23 18:23:55,878 | INFO     | PanDA job id: 6743008321
[2025-07-23 14:24:29] 2025-07-23 18:23:55,878 | INFO     | task id: 45697541
[2025-07-23 14:24:29] 2025-07-23 18:23:55,878 | INFO     | errors: (none)
[2025-07-23 14:24:29] 2025-07-23 18:23:55,878 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-23 14:24:29] 2025-07-23 18:23:55,878 | INFO     | pilot state: finished 
[2025-07-23 14:24:29] 2025-07-23 18:23:55,878 | INFO     | transexitcode: 0
[2025-07-23 14:24:29] 2025-07-23 18:23:55,878 | INFO     | exeerrorcode: 0
[2025-07-23 14:24:29] 2025-07-23 18:23:55,878 | INFO     | exeerrordiag: 
[2025-07-23 14:24:29] 2025-07-23 18:23:55,878 | INFO     | exitcode: 0
[2025-07-23 14:24:29] 2025-07-23 18:23:55,878 | INFO     | exitmsg: OK
[2025-07-23 14:24:29] 2025-07-23 18:23:55,878 | INFO     | cpuconsumptiontime: 34784 s
[2025-07-23 14:24:29] 2025-07-23 18:23:55,878 | INFO     | nevents: 400
[2025-07-23 14:24:29] 2025-07-23 18:23:55,878 | INFO     | neventsw: 0
[2025-07-23 14:24:29] 2025-07-23 18:23:55,878 | INFO     | pid: 2476910
[2025-07-23 14:24:29] 2025-07-23 18:23:55,878 | INFO     | pgrp: 2476910
[2025-07-23 14:24:29] 2025-07-23 18:23:55,878 | INFO     | corecount: 8
[2025-07-23 14:24:29] 2025-07-23 18:23:55,878 | INFO     | event service: False
[2025-07-23 14:24:29] 2025-07-23 18:23:55,878 | INFO     | sizes: {0: 2397508, 3: 2397770, 11: 2397798, 4673: 2424079, 4675: 2433077, 4676: 2433133, 4682: 2433455}
[2025-07-23 14:24:29] 2025-07-23 18:23:55,878 | INFO     | --------------------------------------------------
[2025-07-23 14:24:29] 2025-07-23 18:23:55,878 | INFO     | 
[2025-07-23 14:24:29] 2025-07-23 18:23:55,879 | INFO     | executing command: ls -lF /tmp/boinchome/slots/6
[2025-07-23 14:24:29] 2025-07-23 18:23:55,896 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-23 14:24:29] 2025-07-23 18:23:55,896 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-23 14:24:29] 2025-07-23 18:23:55,896 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-23 14:24:29] 2025-07-23 18:23:55,896 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-23 14:24:29] 2025-07-23 18:23:55,896 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-23 14:24:29] 2025-07-23 18:23:55,897 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-23 14:24:29] 2025-07-23 18:23:55,897 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-23 14:24:29] 2025-07-23 18:23:55,897 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-23 14:24:29] 2025-07-23 18:23:55,897 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-23 14:24:29] 2025-07-23 18:23:55,897 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-23 14:24:29] 2025-07-23 18:23:55,897 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-23 14:24:29] 2025-07-23 18:23:55,897 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-23 14:24:29] 2025-07-23 18:23:55,897 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-23 14:24:29] 2025-07-23 18:23:55,897 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-23 14:24:29] 2025-07-23 18:23:55,897 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-23 14:24:29] 2025-07-23 18:23:55,897 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-23 14:24:29] 2025-07-23 18:23:55,897 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-23 14:24:29] 2025-07-23 18:23:55,897 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-23 14:24:29] 2025-07-23 18:23:55,897 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-23 14:24:29] 2025-07-23 18:23:55,897 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-23 14:24:29] 2025-07-23 18:23:55,897 | INFO     | job 6743008321 has completed (purged errors)
[2025-07-23 14:24:29] 2025-07-23 18:23:55,897 | INFO     | overall cleanup function is called
[2025-07-23 14:24:29] 2025-07-23 18:23:56,904 | INFO     | --- collectZombieJob: --- 10, [2476910]
[2025-07-23 14:24:29] 2025-07-23 18:23:56,904 | INFO     | zombie collector waiting for pid 2476910
[2025-07-23 14:24:29] 2025-07-23 18:23:56,904 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-23 14:24:29] 2025-07-23 18:23:56,904 | INFO     | collected zombie processes
[2025-07-23 14:24:29] 2025-07-23 18:23:56,904 | INFO     | will attempt to kill all subprocesses of pid=2476910
[2025-07-23 14:24:29] 2025-07-23 18:23:57,238 | INFO     | process IDs to be killed: [2476910] (in reverse order)
[2025-07-23 14:24:29] 2025-07-23 18:23:57,349 | WARNING  | found no corresponding commands to process id(s)
[2025-07-23 14:24:29] 2025-07-23 18:23:57,350 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-23 14:24:29] 2025-07-23 18:23:57,363 | INFO     | did not find any defunct processes belonging to 2476910
[2025-07-23 14:24:29] 2025-07-23 18:23:57,375 | INFO     | did not find any defunct processes belonging to 2476910
[2025-07-23 14:24:29] 2025-07-23 18:23:57,375 | INFO     | ready for new job
[2025-07-23 14:24:29] 2025-07-23 18:23:57,375 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-23 14:24:29] 2025-07-23 18:23:57,376 | INFO     | ***************************************
[2025-07-23 14:24:29] 2025-07-23 18:23:57,376 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-23 14:24:29] 2025-07-23 18:23:57,376 | INFO     | ***************************************
[2025-07-23 14:24:29] 2025-07-23 18:23:57,376 | INFO     | 
[2025-07-23 14:24:29] 2025-07-23 18:23:57,381 | INFO     | architecture information:
[2025-07-23 14:24:29] 2025-07-23 18:23:57,381 | INFO     | executing command: cat /etc/os-release
[2025-07-23 14:24:29] 2025-07-23 18:23:57,393 | INFO     | cat /etc/os-release:
[2025-07-23 14:24:29] NAME="CentOS Linux"
[2025-07-23 14:24:29] VERSION="7 (Core)"
[2025-07-23 14:24:29] ID="centos"
[2025-07-23 14:24:29] ID_LIKE="rhel fedora"
[2025-07-23 14:24:29] VERSION_ID="7"
[2025-07-23 14:24:29] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-23 14:24:29] ANSI_COLOR="0;31"
[2025-07-23 14:24:29] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-23 14:24:29] HOME_URL="https://www.centos.org/"
[2025-07-23 14:24:29] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-23 14:24:29] 
[2025-07-23 14:24:29] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-23 14:24:29] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-23 14:24:29] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-23 14:24:29] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-23 14:24:29] 
[2025-07-23 14:24:29] 2025-07-23 18:23:57,394 | INFO     | ***************************************
[2025-07-23 14:24:29] 2025-07-23 18:23:57,896 | INFO     | executing command: df -mP /tmp/boinchome/slots/6
[2025-07-23 14:24:29] 2025-07-23 18:23:57,910 | INFO     | sufficient remaining disk space (159305957376 B)
[2025-07-23 14:24:29] 2025-07-23 18:23:57,910 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-23 14:24:29] 2025-07-23 18:23:57,910 | INFO     | current server update state: UPDATING_FINAL
[2025-07-23 14:24:29] 2025-07-23 18:23:57,910 | INFO     | update_server=False
[2025-07-23 14:24:29] 2025-07-23 18:23:57,910 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-23 14:24:29] 2025-07-23 18:23:57,910 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-23 14:24:29] 2025-07-23 18:23:57,911 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-23 14:24:29] 2025-07-23 18:23:57,911 | INFO     | aborting loop
[2025-07-23 14:24:29] 2025-07-23 18:23:58,273 | INFO     | all payload control threads have been joined
[2025-07-23 14:24:29] 2025-07-23 18:23:58,915 | INFO     | [job] retrieve thread has finished
[2025-07-23 14:24:29] 2025-07-23 18:23:58,916 | INFO     | [job] job monitor thread has finished
[2025-07-23 14:24:29] 2025-07-23 18:23:58,955 | INFO     | [payload] failed_post thread has finished
[2025-07-23 14:24:29] 2025-07-23 18:23:58,996 | INFO     | all data control threads have been joined
[2025-07-23 14:24:29] 2025-07-23 18:23:59,202 | INFO     | [job] validate thread has finished
[2025-07-23 14:24:29] 2025-07-23 18:23:59,217 | INFO     | all job control threads have been joined
[2025-07-23 14:24:29] 2025-07-23 18:23:59,279 | INFO     | [payload] control thread has finished
[2025-07-23 14:24:29] 2025-07-23 18:23:59,320 | INFO     | [payload] validate_pre thread has finished
[2025-07-23 14:24:29] 2025-07-23 18:23:59,357 | INFO     | [job] create_data_payload thread has finished
[2025-07-23 14:24:29] 2025-07-23 18:23:59,410 | INFO     | [data] copytool_in thread has finished
[2025-07-23 14:24:29] 2025-07-23 18:23:59,507 | INFO     | [payload] validate_post thread has finished
[2025-07-23 14:24:29] 2025-07-23 18:23:59,710 | INFO     | [payload] execute_payloads thread has finished
[2025-07-23 14:24:29] 2025-07-23 18:23:59,916 | INFO     | [data] copytool_out thread has finished
[2025-07-23 14:24:29] 2025-07-23 18:24:00,002 | INFO     | [data] control thread has finished
[2025-07-23 14:24:29] 2025-07-23 18:24:00,222 | INFO     | [job] control thread has finished
[2025-07-23 14:24:29] 2025-07-23 18:24:00,255 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-23 14:24:29] 2025-07-23 18:24:00,888 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-23 14:24:29] 2025-07-23 18:24:01,893 | INFO     | [job] queue monitor thread has finished
[2025-07-23 14:24:29] 2025-07-23 18:24:04,261 | INFO     | [data] queue_monitor thread has finished
[2025-07-23 14:24:29] 2025-07-23 18:24:08,022 | INFO     | job.realtimelogging is not enabled
[2025-07-23 14:24:29] 2025-07-23 18:24:09,027 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-23 14:24:29] 2025-07-23 18:24:10,107 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140433058383680)>', '<ExcThread(monitor, started 140432696645376)>']
[2025-07-23 14:24:29] 2025-07-23 18:24:15,130 | INFO     | all workflow threads have been joined
[2025-07-23 14:24:29] 2025-07-23 18:24:15,130 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-23 14:24:29] 2025-07-23 18:24:15,131 | INFO     | traces error code: 0
[2025-07-23 14:24:29] 2025-07-23 18:24:15,131 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-23 14:24:29] 2025-07-23 18:24:29,233 | INFO     | PID=2469787 has CPU usage=5.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-07-23 14:24:29] 2025-07-23 18:24:29,233 | INFO     | .. there are 16 such processes running
[2025-07-23 14:24:29] 2025-07-23 18:24:29,233 | INFO     | found 0 job(s) in 20 queues
[2025-07-23 14:24:29] 2025-07-23 18:24:29,233 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-23 14:24:29] 2025-07-23 18:24:29,234 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-23 14:24:29] 2025-07-23 18:24:29,234 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-23 14:24:29] 2025-07-23 18:24:29,234 | CRITICAL | thread 'MainThread' is not alive
[2025-07-23 14:24:29] 2025-07-23 18:24:29,234 | INFO     | [monitor] control thread has ended
[2025-07-23 14:24:29] 2025-07-23 18:24:29,309 [wrapper] ==== pilot stdout END ====
[2025-07-23 14:24:29] 2025-07-23 18:24:29,311 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-23 14:24:29] 2025-07-23 18:24:29,313 [wrapper] pilotpid: 2469787
[2025-07-23 14:24:29] 2025-07-23 18:24:29,314 [wrapper] Pilot exit status: 0
[2025-07-23 14:24:29] 2025-07-23 18:24:29,322 [wrapper] pandaids: 6743008321
[2025-07-23 14:24:29] 2025-07-23 18:24:29,398 [wrapper] cleanup supervisor_pilot 2870515 2469788
[2025-07-23 14:24:29] 2025-07-23 18:24:29,401 [wrapper] Test setup, not cleaning
[2025-07-23 14:24:29] 2025-07-23 18:24:29,403 [wrapper] apfmon messages muted
[2025-07-23 14:24:29] 2025-07-23 18:24:29,405 [wrapper] ==== wrapper stdout END ====
[2025-07-23 14:24:29] 2025-07-23 18:24:29,407 [wrapper] ==== wrapper stderr END ====
[2025-07-23 14:24:29]  *** Error codes and diagnostics ***
[2025-07-23 14:24:29]     "exeErrorCode": 0,
[2025-07-23 14:24:29]     "exeErrorDiag": "",
[2025-07-23 14:24:29]     "pilotErrorCode": 0,
[2025-07-23 14:24:29]     "pilotErrorDiag": "",
[2025-07-23 14:24:29]  *** Listing of results directory ***
[2025-07-23 14:24:29] total 646320
[2025-07-23 14:24:29] -rw-r--r--. 1 boincer umatlas    530466 Jul 22 23:19 pilot3.tar.gz
[2025-07-23 14:24:29] -rwx------. 1 boincer umatlas     36292 Jul 22 23:31 runpilot2-wrapper.sh
[2025-07-23 14:24:29] -rw-r--r--. 1 boincer umatlas      5112 Jul 22 23:31 queuedata.json
[2025-07-23 14:24:29] -rw-r--r--. 1 boincer umatlas       100 Jul 23 13:05 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-23 14:24:29] -rwxr-xr-x. 1 boincer umatlas      7986 Jul 23 13:05 run_atlas
[2025-07-23 14:24:29] -rw-r--r--. 1 boincer umatlas       105 Jul 23 13:05 job.xml
[2025-07-23 14:24:29] -rw-r--r--. 2 boincer umatlas 348577209 Jul 23 13:05 EVNT.45697539._000177.pool.root.1
[2025-07-23 14:24:29] -rw-r--r--. 2 boincer umatlas    542895 Jul 23 13:05 input.tar.gz
[2025-07-23 14:24:29] -rw-r--r--. 2 boincer umatlas     15095 Jul 23 13:05 start_atlas.sh
[2025-07-23 14:24:29] drwxrwx--x. 2 boincer umatlas      4096 Jul 23 13:05 shared
[2025-07-23 14:24:29] -rw-r--r--. 1 boincer umatlas         0 Jul 23 13:05 boinc_lockfile
[2025-07-23 14:24:29] -rw-r--r--. 1 boincer umatlas      2594 Jul 23 13:05 pandaJob.out
[2025-07-23 14:24:29] -rw-------. 1 boincer umatlas    978487 Jul 23 13:05 agis_schedconf.cvmfs.json
[2025-07-23 14:24:29] -rw-------. 1 boincer umatlas   1593041 Jul 23 13:05 agis_ddmendpoints.agis.ALL.json
[2025-07-23 14:24:29] drwx------. 4 boincer umatlas      4096 Jul 23 13:05 pilot3
[2025-07-23 14:24:29] -rw-r--r--. 1 boincer umatlas      7173 Jul 23 14:19 init_data.xml
[2025-07-23 14:24:29] -rw-------. 1 boincer umatlas 307860602 Jul 23 14:23 HITS.45697541._005258.pool.root.1
[2025-07-23 14:24:29] -rw-r--r--. 1 boincer umatlas       529 Jul 23 14:23 boinc_task_state.xml
[2025-07-23 14:24:29] -rw-------. 1 boincer umatlas      1031 Jul 23 14:23 memory_monitor_summary.json
[2025-07-23 14:24:29] -rw-------. 1 boincer umatlas    298760 Jul 23 14:23 log.45697541._005258.job.log.tgz.1
[2025-07-23 14:24:29] -rw-------. 1 boincer umatlas      7765 Jul 23 14:23 heartbeat.json
[2025-07-23 14:24:29] -rw-r--r--. 1 boincer umatlas      8192 Jul 23 14:24 boinc_mmap_file
[2025-07-23 14:24:29] -rw-r--r--. 1 boincer umatlas        27 Jul 23 14:24 wrapper_checkpoint.txt
[2025-07-23 14:24:29] -rw-------. 1 boincer umatlas       893 Jul 23 14:24 pilotlog.txt
[2025-07-23 14:24:29] -rw-------. 1 boincer umatlas        95 Jul 23 14:24 pilot_heartbeat.json
[2025-07-23 14:24:29] -rw-------. 1 boincer umatlas    464440 Jul 23 14:24 log.45697541._005258.job.log.1
[2025-07-23 14:24:29] -rw-------. 1 boincer umatlas       357 Jul 23 14:24 output.list
[2025-07-23 14:24:29] -rw-r--r--. 1 boincer umatlas       620 Jul 23 14:24 runtime_log
[2025-07-23 14:24:29] -rw-------. 1 boincer umatlas    778240 Jul 23 14:24 result.tar.gz
[2025-07-23 14:24:29] -rw-r--r--. 1 boincer umatlas      8660 Jul 23 14:24 runtime_log.err
[2025-07-23 14:24:29] -rw-------. 1 boincer umatlas       651 Jul 23 14:24 czEODmFNfy7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmqoKLDmx5SUIo.diag
[2025-07-23 14:24:29] -rw-r--r--. 1 boincer umatlas     21689 Jul 23 14:24 stderr.txt
[2025-07-23 14:24:29] HITS file was successfully produced:
[2025-07-23 14:24:29] -rw-------. 1 boincer umatlas 307860602 Jul 23 14:23 shared/HITS.pool.root.1
[2025-07-23 14:24:29]  *** Contents of shared directory: ***
[2025-07-23 14:24:29] total 642372
[2025-07-23 14:24:29] -rw-r--r--. 2 boincer umatlas 348577209 Jul 23 13:05 ATLAS.root_0
[2025-07-23 14:24:29] -rw-r--r--. 2 boincer umatlas    542895 Jul 23 13:05 input.tar.gz
[2025-07-23 14:24:29] -rw-r--r--. 2 boincer umatlas     15095 Jul 23 13:05 start_atlas.sh
[2025-07-23 14:24:29] -rw-------. 1 boincer umatlas 307860602 Jul 23 14:23 HITS.pool.root.1
[2025-07-23 14:24:29] -rw-------. 1 boincer umatlas    778240 Jul 23 14:24 result.tar.gz
14:24:31 (2465619): run_atlas exited; CPU time 34908.116534
14:24:31 (2465619): called boinc_finish(0)

</stderr_txt>
]]>

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