Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
00:00:47 (1973323): wrapper (7.7.26015): starting
00:00:47 (1973323): wrapper: running run_atlas (--nthreads 12)
[2025-07-24 00:00:47] Arguments: --nthreads 12
[2025-07-24 00:00:47] Threads: 12
[2025-07-24 00:00:47] Checking for CVMFS
[2025-07-24 00:00:48] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-24 00:00:48] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-24 00:00:48] Running cvmfs_config stat atlas.cern.ch
[2025-07-24 00:00:48] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-24 00:00:48] 2.13.1.0 8846 27684 144084 148672 2 196 33812277 46080000 8070 130560 0 242806608 99.905 67714746 26936 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://[2001:718:401:6025:1:0:2:0]:3128 1
[2025-07-24 00:00:48] CVMFS is ok
[2025-07-24 00:00:48] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-07-24 00:00:48] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-07-24 00:00:48] Further information can be found at the LHC@home message board.
[2025-07-24 00:00:48] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-24 00:00:48] Checking for apptainer binary...
[2025-07-24 00:00:48] Using apptainer found in PATH at /usr/bin/apptainer
[2025-07-24 00:00:48] Running /usr/bin/apptainer --version
[2025-07-24 00:00:48] apptainer version 1.4.1-1.el9
[2025-07-24 00:00:48] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-24 00:00:48] mff2101.farm.particle.cz
[2025-07-24 00:00:48] apptainer works
[2025-07-24 00:00:48] Set ATHENA_PROC_NUMBER=12
[2025-07-24 00:00:48] Set ATHENA_CORE_NUMBER=12
[2025-07-24 00:00:48] Starting ATLAS job with PandaID=6743006040
[2025-07-24 00:00:48] Running command: /usr/bin/apptainer exec -B /cvmfs,/scratch/.boinc/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-24 01:36:24]  *** The last 200 lines of the pilot log: ***
[2025-07-24 01:36:24]  scope=mc23_13p6TeV
[2025-07-24 01:36:24]  status=None
[2025-07-24 01:36:24]  status_code=0
[2025-07-24 01:36:24]  storage_token=
[2025-07-24 01:36:24]  surl=/scratch/.boinc/slots/2/PanDA_Pilot-6743006040/log.45697541._004619.job.log.tgz.1
[2025-07-24 01:36:24]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/4b/cd/log.45697541._004619.job.log.tgz.1
[2025-07-24 01:36:24]  workdir=None
[2025-07-24 01:36:24] ]
[2025-07-24 01:36:24] 2025-07-23 23:35:42,639 | INFO     | transferring file log.45697541._004619.job.log.tgz.1 from /scratch/.boinc/slots/2/PanDA_Pilot-6743006040/log.45697541._004619.job.log.tgz.1 to /scratch/.boinc/slot
[2025-07-24 01:36:24] 2025-07-23 23:35:42,640 | INFO     | executing command: /usr/bin/env mv /scratch/.boinc/slots/2/PanDA_Pilot-6743006040/log.45697541._004619.job.log.tgz.1 /scratch/.boinc/slots/2/log.45697541._004619.j
[2025-07-24 01:36:24] 2025-07-23 23:35:42,666 | INFO     | adding to output.list: log.45697541._004619.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/4b/cd/log.45697541._004619.job.log.tg
[2025-07-24 01:36:24] 2025-07-23 23:35:42,667 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-07-24 01:36:24] 2025-07-23 23:35:42,667 | INFO     | summary of transferred files:
[2025-07-24 01:36:24] 2025-07-23 23:35:42,667 | INFO     |  -- lfn=log.45697541._004619.job.log.tgz.1, status_code=0, status=transferred
[2025-07-24 01:36:24] 2025-07-23 23:35:42,668 | INFO     | stage-out finished correctly
[2025-07-24 01:36:24] 2025-07-23 23:35:43,763 | INFO     | monitor loop #408: job 0:6743006040 is in state 'finished'
[2025-07-24 01:36:24] 2025-07-23 23:35:43,763 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-24 01:36:24] 2025-07-23 23:35:45,019 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-07-24 01:36:24] 2025-07-23 23:35:46,266 | INFO     | monitor loop #409: job 0:6743006040 is in state 'finished'
[2025-07-24 01:36:24] 2025-07-23 23:35:46,267 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-24 01:36:24] 2025-07-23 23:35:46,844 | INFO     | job 6743006040 has state=finished
[2025-07-24 01:36:24] 2025-07-23 23:35:46,844 | INFO     | preparing for final server update for job 6743006040 in state='finished'
[2025-07-24 01:36:24] 2025-07-23 23:35:46,845 | INFO     | this job has now completed (state=finished)
[2025-07-24 01:36:24] 2025-07-23 23:35:46,845 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-07-24 01:36:24] 2025-07-23 23:35:46,845 | INFO     | log transfer has been attempted: DONE
[2025-07-24 01:36:24] 2025-07-23 23:35:46,845 | INFO     | job 6743006040 has finished - writing final server update
[2025-07-24 01:36:24] 2025-07-23 23:35:46,846 | INFO     | total number of processed events: 400 (read)
[2025-07-24 01:36:24] 2025-07-23 23:35:46,846 | INFO     | executing command: lscpu
[2025-07-24 01:36:24] 2025-07-23 23:35:46,928 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-07-24 01:36:24] 2025-07-23 23:35:48,770 | INFO     | monitor loop #410: job 0:6743006040 is in state 'finished'
[2025-07-24 01:36:24] 2025-07-23 23:35:48,771 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-24 01:36:24] 2025-07-23 23:35:49,417 | INFO     | PID=1977309 has CPU usage=10.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2025-07-24 01:36:24] 2025-07-23 23:35:49,418 | INFO     | .. there are 11 such processes running
[2025-07-24 01:36:24] 2025-07-23 23:35:50,419 | INFO     | 5692s have passed since pilot start - server update state is 'UPDATING_FINAL'
[2025-07-24 01:36:24] 2025-07-23 23:35:51,274 | INFO     | monitor loop #411: job 0:6743006040 is in state 'finished'
[2025-07-24 01:36:24] 2025-07-23 23:35:51,274 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-24 01:36:24] 2025-07-23 23:35:52,038 | INFO     | CPU arch script returned: x86-64-v3
[2025-07-24 01:36:24] 2025-07-23 23:35:52,051 | INFO     | found 48 cores (24 cores per socket, 2 sockets) HT, CPU MHz: 2779.5190520833326
[2025-07-24 01:36:24] 2025-07-23 23:35:52,068 | INFO     | using path: /scratch/.boinc/slots/2/PanDA_Pilot-6743006040/memory_monitor_summary.json (trf name=prmon)
[2025-07-24 01:36:24] 2025-07-23 23:35:52,068 | INFO     | extracted standard info from prmon json
[2025-07-24 01:36:24] 2025-07-23 23:35:52,068 | INFO     | extracted standard memory fields from prmon json
[2025-07-24 01:36:24] 2025-07-23 23:35:52,069 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-24 01:36:24] 2025-07-23 23:35:52,069 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-24 01:36:24] 2025-07-23 23:35:52,069 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-24 01:36:24] 2025-07-23 23:35:52,071 | INFO     | fitting pss+swap vs Time
[2025-07-24 01:36:24] 2025-07-23 23:35:52,071 | INFO     | sum of square deviations: 197203697.5
[2025-07-24 01:36:24] 2025-07-23 23:35:52,071 | INFO     | sum of deviations: 4624099571.0
[2025-07-24 01:36:24] 2025-07-23 23:35:52,071 | INFO     | mean x: 1753310988.5
[2025-07-24 01:36:24] 2025-07-23 23:35:52,071 | INFO     | mean y: 2766236.465116279
[2025-07-24 01:36:24] 2025-07-23 23:35:52,072 | INFO     | -- intersect: -41109467928.172874
[2025-07-24 01:36:24] 2025-07-23 23:35:52,072 | INFO     | intersect: -41109467928.172874
[2025-07-24 01:36:24] 2025-07-23 23:35:52,072 | INFO     | chi2: 0.038811074620693393
[2025-07-24 01:36:24] 2025-07-23 23:35:52,072 | INFO     | -- intersect: -41109467928.172874
[2025-07-24 01:36:24] 2025-07-23 23:35:52,072 | INFO     | current memory leak: 23.45 B/s (using 86 data points, chi2=0.04)
[2025-07-24 01:36:24] 2025-07-23 23:35:52,072 | INFO     | could have reported an average CPU frequency of 2767 MHz (7 samples)
[2025-07-24 01:36:24] 2025-07-23 23:35:52,072 | INFO     | ..............................
[2025-07-24 01:36:24] 2025-07-23 23:35:52,073 | INFO     | . Timing measurements:
[2025-07-24 01:36:24] 2025-07-23 23:35:52,073 | INFO     | . get job = 0 s
[2025-07-24 01:36:24] 2025-07-23 23:35:52,073 | INFO     | . initial setup = 1 s
[2025-07-24 01:36:24] 2025-07-23 23:35:52,073 | INFO     | . payload setup = 8 s
[2025-07-24 01:36:24] 2025-07-23 23:35:52,073 | INFO     | . stage-in = 0 s
[2025-07-24 01:36:24] 2025-07-23 23:35:52,073 | INFO     | . payload execution = 5651 s
[2025-07-24 01:36:24] 2025-07-23 23:35:52,073 | INFO     | . stage-out = 0 s
[2025-07-24 01:36:24] 2025-07-23 23:35:52,073 | INFO     | . log creation = 0 s
[2025-07-24 01:36:24] 2025-07-23 23:35:52,073 | INFO     | ..............................
[2025-07-24 01:36:24] 2025-07-23 23:35:52,165 | INFO     | 
[2025-07-24 01:36:24] 2025-07-23 23:35:52,165 | INFO     | job summary report
[2025-07-24 01:36:24] 2025-07-23 23:35:52,165 | INFO     | --------------------------------------------------
[2025-07-24 01:36:24] 2025-07-23 23:35:52,165 | INFO     | PanDA job id: 6743006040
[2025-07-24 01:36:24] 2025-07-23 23:35:52,165 | INFO     | task id: 45697541
[2025-07-24 01:36:24] 2025-07-23 23:35:52,166 | INFO     | errors: (none)
[2025-07-24 01:36:24] 2025-07-23 23:35:52,166 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-24 01:36:24] 2025-07-23 23:35:52,166 | INFO     | pilot state: finished 
[2025-07-24 01:36:24] 2025-07-23 23:35:52,166 | INFO     | transexitcode: 0
[2025-07-24 01:36:24] 2025-07-23 23:35:52,166 | INFO     | exeerrorcode: 0
[2025-07-24 01:36:24] 2025-07-23 23:35:52,166 | INFO     | exeerrordiag: 
[2025-07-24 01:36:24] 2025-07-23 23:35:52,166 | INFO     | exitcode: 0
[2025-07-24 01:36:24] 2025-07-23 23:35:52,166 | INFO     | exitmsg: OK
[2025-07-24 01:36:24] 2025-07-23 23:35:52,166 | INFO     | cpuconsumptiontime: 60014 s
[2025-07-24 01:36:24] 2025-07-23 23:35:52,166 | INFO     | nevents: 400
[2025-07-24 01:36:24] 2025-07-23 23:35:52,166 | INFO     | neventsw: 0
[2025-07-24 01:36:24] 2025-07-23 23:35:52,166 | INFO     | pid: 1984467
[2025-07-24 01:36:24] 2025-07-23 23:35:52,167 | INFO     | pgrp: 1984467
[2025-07-24 01:36:24] 2025-07-23 23:35:52,167 | INFO     | corecount: 12
[2025-07-24 01:36:24] 2025-07-23 23:35:52,167 | INFO     | event service: False
[2025-07-24 01:36:24] 2025-07-23 23:35:52,167 | INFO     | sizes: {0: 2397337, 1: 2397536, 6: 2397798, 11: 2397826, 5663: 2424457, 5666: 2433457, 5668: 2433641, 5675: 2433835}
[2025-07-24 01:36:24] 2025-07-23 23:35:52,167 | INFO     | --------------------------------------------------
[2025-07-24 01:36:24] 2025-07-23 23:35:52,167 | INFO     | 
[2025-07-24 01:36:24] 2025-07-23 23:35:52,167 | INFO     | executing command: ls -lF /scratch/.boinc/slots/2
[2025-07-24 01:36:24] 2025-07-23 23:35:52,195 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-24 01:36:24] 2025-07-23 23:35:52,195 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-24 01:36:24] 2025-07-23 23:35:52,195 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-24 01:36:24] 2025-07-23 23:35:52,195 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-24 01:36:24] 2025-07-23 23:35:52,195 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-24 01:36:24] 2025-07-23 23:35:52,195 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-24 01:36:24] 2025-07-23 23:35:52,195 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-24 01:36:24] 2025-07-23 23:35:52,195 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-24 01:36:24] 2025-07-23 23:35:52,195 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-24 01:36:24] 2025-07-23 23:35:52,196 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-24 01:36:24] 2025-07-23 23:35:52,196 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-24 01:36:24] 2025-07-23 23:35:52,196 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-24 01:36:24] 2025-07-23 23:35:52,196 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-24 01:36:24] 2025-07-23 23:35:52,196 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-24 01:36:24] 2025-07-23 23:35:52,196 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-24 01:36:24] 2025-07-23 23:35:52,196 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-24 01:36:24] 2025-07-23 23:35:52,196 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-24 01:36:24] 2025-07-23 23:35:52,196 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-24 01:36:24] 2025-07-23 23:35:52,196 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-24 01:36:24] 2025-07-23 23:35:52,196 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-24 01:36:24] 2025-07-23 23:35:52,196 | INFO     | job 6743006040 has completed (purged errors)
[2025-07-24 01:36:24] 2025-07-23 23:35:52,197 | INFO     | overall cleanup function is called
[2025-07-24 01:36:24] 2025-07-23 23:35:53,205 | INFO     | --- collectZombieJob: --- 10, [1984467]
[2025-07-24 01:36:24] 2025-07-23 23:35:53,206 | INFO     | zombie collector waiting for pid 1984467
[2025-07-24 01:36:24] 2025-07-23 23:35:53,206 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-24 01:36:24] 2025-07-23 23:35:53,206 | INFO     | collected zombie processes
[2025-07-24 01:36:24] 2025-07-23 23:35:53,206 | INFO     | will attempt to kill all subprocesses of pid=1984467
[2025-07-24 01:36:24] 2025-07-23 23:35:53,562 | INFO     | process IDs to be killed: [1984467] (in reverse order)
[2025-07-24 01:36:24] 2025-07-23 23:35:53,679 | WARNING  | found no corresponding commands to process id(s)
[2025-07-24 01:36:24] 2025-07-23 23:35:53,679 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-24 01:36:24] 2025-07-23 23:35:53,692 | INFO     | did not find any defunct processes belonging to 1984467
[2025-07-24 01:36:24] 2025-07-23 23:35:53,705 | INFO     | did not find any defunct processes belonging to 1984467
[2025-07-24 01:36:24] 2025-07-23 23:35:53,705 | INFO     | ready for new job
[2025-07-24 01:36:24] 2025-07-23 23:35:53,705 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-24 01:36:24] 2025-07-23 23:35:53,707 | INFO     | ***************************************
[2025-07-24 01:36:24] 2025-07-23 23:35:53,707 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-24 01:36:24] 2025-07-23 23:35:53,707 | INFO     | ***************************************
[2025-07-24 01:36:24] 2025-07-23 23:35:53,707 | INFO     | 
[2025-07-24 01:36:24] 2025-07-23 23:35:53,714 | INFO     | architecture information:
[2025-07-24 01:36:24] 2025-07-23 23:35:53,714 | INFO     | executing command: cat /etc/os-release
[2025-07-24 01:36:24] 2025-07-23 23:35:53,736 | INFO     | cat /etc/os-release:
[2025-07-24 01:36:24] NAME="CentOS Linux"
[2025-07-24 01:36:24] VERSION="7 (Core)"
[2025-07-24 01:36:24] ID="centos"
[2025-07-24 01:36:24] ID_LIKE="rhel fedora"
[2025-07-24 01:36:24] VERSION_ID="7"
[2025-07-24 01:36:24] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-24 01:36:24] ANSI_COLOR="0;31"
[2025-07-24 01:36:24] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-24 01:36:24] HOME_URL="https://www.centos.org/"
[2025-07-24 01:36:24] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-24 01:36:24] 
[2025-07-24 01:36:24] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-24 01:36:24] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-24 01:36:24] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-24 01:36:24] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-24 01:36:24] 
[2025-07-24 01:36:24] 2025-07-23 23:35:53,736 | INFO     | ***************************************
[2025-07-24 01:36:24] 2025-07-23 23:35:54,239 | INFO     | executing command: df -mP /scratch/.boinc/slots/2
[2025-07-24 01:36:24] 2025-07-23 23:35:54,262 | INFO     | sufficient remaining disk space (1675441995776 B)
[2025-07-24 01:36:24] 2025-07-23 23:35:54,263 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-24 01:36:24] 2025-07-23 23:35:54,263 | INFO     | current server update state: UPDATING_FINAL
[2025-07-24 01:36:24] 2025-07-23 23:35:54,263 | INFO     | update_server=False
[2025-07-24 01:36:24] 2025-07-23 23:35:54,263 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-24 01:36:24] 2025-07-23 23:35:54,263 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-24 01:36:24] 2025-07-23 23:35:54,279 | INFO     | all job control threads have been joined
[2025-07-24 01:36:24] 2025-07-23 23:35:54,780 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-24 01:36:24] 2025-07-23 23:35:54,781 | INFO     | aborting loop
[2025-07-24 01:36:24] 2025-07-23 23:35:55,023 | INFO     | all data control threads have been joined
[2025-07-24 01:36:24] 2025-07-23 23:35:55,268 | INFO     | [job] retrieve thread has finished
[2025-07-24 01:36:24] 2025-07-23 23:35:55,285 | INFO     | [job] control thread has finished
[2025-07-24 01:36:24] 2025-07-23 23:35:55,286 | INFO     | [job] create_data_payload thread has finished
[2025-07-24 01:36:24] 2025-07-23 23:35:55,559 | INFO     | [payload] validate_pre thread has finished
[2025-07-24 01:36:24] 2025-07-23 23:35:55,621 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-24 01:36:24] 2025-07-23 23:35:55,633 | INFO     | all payload control threads have been joined
[2025-07-24 01:36:24] 2025-07-23 23:35:55,784 | INFO     | [payload] validate_post thread has finished
[2025-07-24 01:36:24] 2025-07-23 23:35:55,786 | INFO     | [job] job monitor thread has finished
[2025-07-24 01:36:24] 2025-07-23 23:35:56,028 | INFO     | [data] control thread has finished
[2025-07-24 01:36:24] 2025-07-23 23:35:56,269 | INFO     | [data] copytool_out thread has finished
[2025-07-24 01:36:24] 2025-07-23 23:35:56,287 | INFO     | [payload] execute_payloads thread has finished
[2025-07-24 01:36:24] 2025-07-23 23:35:56,290 | INFO     | [data] copytool_in thread has finished
[2025-07-24 01:36:24] 2025-07-23 23:35:56,315 | INFO     | [payload] failed_post thread has finished
[2025-07-24 01:36:24] 2025-07-23 23:35:56,547 | INFO     | [job] validate thread has finished
[2025-07-24 01:36:24] 2025-07-23 23:35:56,639 | INFO     | [payload] control thread has finished
[2025-07-24 01:36:24] 2025-07-23 23:35:57,171 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-24 01:36:24] 2025-07-23 23:35:58,176 | INFO     | [job] queue monitor thread has finished
[2025-07-24 01:36:24] 2025-07-23 23:35:59,625 | INFO     | [data] queue_monitor thread has finished
[2025-07-24 01:36:24] 2025-07-23 23:36:04,471 | INFO     | job.realtimelogging is not enabled
[2025-07-24 01:36:24] 2025-07-23 23:36:05,477 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-24 01:36:24] 2025-07-23 23:36:07,208 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140217139525440)>', '<ExcThread(monitor, started 140216505456384)>']
[2025-07-24 01:36:24] 2025-07-23 23:36:12,213 | INFO     | all workflow threads have been joined
[2025-07-24 01:36:24] 2025-07-23 23:36:12,214 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-24 01:36:24] 2025-07-23 23:36:12,214 | INFO     | traces error code: 0
[2025-07-24 01:36:24] 2025-07-23 23:36:12,214 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-24 01:36:24] 2025-07-23 23:36:23,946 | INFO     | PID=1977309 has CPU usage=3.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-07-24 01:36:24] 2025-07-23 23:36:23,946 | INFO     | .. there are 11 such processes running
[2025-07-24 01:36:24] 2025-07-23 23:36:23,946 | INFO     | found 0 job(s) in 20 queues
[2025-07-24 01:36:24] 2025-07-23 23:36:23,946 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-24 01:36:24] 2025-07-23 23:36:23,946 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-24 01:36:24] 2025-07-23 23:36:23,946 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-24 01:36:24] 2025-07-23 23:36:23,947 | INFO     | [monitor] control thread has ended
[2025-07-24 01:36:24] 2025-07-23 23:36:24,133 [wrapper] ==== pilot stdout END ====
[2025-07-24 01:36:24] 2025-07-23 23:36:24,138 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-24 01:36:24] 2025-07-23 23:36:24,142 [wrapper] pilotpid: 1977309
[2025-07-24 01:36:24] 2025-07-23 23:36:24,145 [wrapper] Pilot exit status: 0
[2025-07-24 01:36:24] 2025-07-23 23:36:24,159 [wrapper] pandaids: 6743006040
[2025-07-24 01:36:24] 2025-07-23 23:36:24,244 [wrapper] cleanup supervisor_pilot 2203532 1977310
[2025-07-24 01:36:24] 2025-07-23 23:36:24,248 [wrapper] Test setup, not cleaning
[2025-07-24 01:36:24] 2025-07-23 23:36:24,252 [wrapper] apfmon messages muted
[2025-07-24 01:36:24] 2025-07-23 23:36:24,255 [wrapper] ==== wrapper stdout END ====
[2025-07-24 01:36:24] 2025-07-23 23:36:24,258 [wrapper] ==== wrapper stderr END ====
[2025-07-24 01:36:24]  *** Error codes and diagnostics ***
[2025-07-24 01:36:24]     "exeErrorCode": 0,
[2025-07-24 01:36:24]     "exeErrorDiag": "",
[2025-07-24 01:36:24]     "pilotErrorCode": 0,
[2025-07-24 01:36:24]     "pilotErrorDiag": "",
[2025-07-24 01:36:24]  *** Listing of results directory ***
[2025-07-24 01:36:24] total 648184
[2025-07-24 01:36:24] -rw-r--r-- 1 boinc boinc    530466 Jul 23 04:25 pilot3.tar.gz
[2025-07-24 01:36:24] -rw-r--r-- 1 boinc boinc      5112 Jul 23 04:35 queuedata.json
[2025-07-24 01:36:24] -rwx------ 1 boinc boinc     36292 Jul 23 04:39 runpilot2-wrapper.sh
[2025-07-24 01:36:24] -rw-r--r-- 1 boinc boinc       100 Jul 24 00:00 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-24 01:36:24] -rwxr-xr-x 1 boinc boinc      7986 Jul 24 00:00 run_atlas
[2025-07-24 01:36:24] -rw-r--r-- 1 boinc boinc       105 Jul 24 00:00 job.xml
[2025-07-24 01:36:24] -rw-r--r-- 1 boinc boinc      6664 Jul 24 00:00 init_data.xml
[2025-07-24 01:36:24] -rw-r--r-- 2 boinc boinc 347779860 Jul 24 00:00 EVNT.45697539._000151.pool.root.1
[2025-07-24 01:36:24] -rw-r--r-- 2 boinc boinc     15095 Jul 24 00:00 start_atlas.sh
[2025-07-24 01:36:24] drwxrwx--x 2 boinc boinc      4096 Jul 24 00:00 shared
[2025-07-24 01:36:24] -rw-r--r-- 2 boinc boinc    542897 Jul 24 00:00 input.tar.gz
[2025-07-24 01:36:24] -rw-r--r-- 1 boinc boinc         0 Jul 24 00:00 boinc_lockfile
[2025-07-24 01:36:24] -rw-r--r-- 1 boinc boinc      2593 Jul 24 00:00 pandaJob.out
[2025-07-24 01:36:24] -rw------- 1 boinc boinc    979632 Jul 24 00:00 agis_schedconf.cvmfs.json
[2025-07-24 01:36:24] -rw------- 1 boinc boinc   1593041 Jul 24 00:00 agis_ddmendpoints.agis.ALL.json
[2025-07-24 01:36:24] drwx------ 4 boinc boinc      4096 Jul 24 00:01 pilot3
[2025-07-24 01:36:24] -rw-r--r-- 1 boinc boinc       530 Jul 24 01:34 boinc_task_state.xml
[2025-07-24 01:36:24] -rw------- 1 boinc boinc 310232589 Jul 24 01:34 HITS.45697541._004619.pool.root.1
[2025-07-24 01:36:24] -rw------- 1 boinc boinc      1036 Jul 24 01:35 memory_monitor_summary.json
[2025-07-24 01:36:24] -rw------- 1 boinc boinc    380198 Jul 24 01:35 log.45697541._004619.job.log.tgz.1
[2025-07-24 01:36:24] -rw------- 1 boinc boinc        95 Jul 24 01:35 pilot_heartbeat.json
[2025-07-24 01:36:24] -rw------- 1 boinc boinc      7781 Jul 24 01:35 heartbeat.json
[2025-07-24 01:36:24] -rw-r--r-- 1 boinc boinc      8192 Jul 24 01:36 boinc_mmap_file
[2025-07-24 01:36:24] -rw------- 1 boinc boinc       823 Jul 24 01:36 pilotlog.txt
[2025-07-24 01:36:24] -rw-r--r-- 1 boinc boinc        27 Jul 24 01:36 wrapper_checkpoint.txt
[2025-07-24 01:36:24] -rw------- 1 boinc boinc    546370 Jul 24 01:36 log.45697541._004619.job.log.1
[2025-07-24 01:36:24] -rw------- 1 boinc boinc       357 Jul 24 01:36 output.list
[2025-07-24 01:36:24] -rw-r--r-- 1 boinc boinc       620 Jul 24 01:36 runtime_log
[2025-07-24 01:36:24] -rw------- 1 boinc boinc    942080 Jul 24 01:36 result.tar.gz
[2025-07-24 01:36:24] -rw-r--r-- 1 boinc boinc      8721 Jul 24 01:36 runtime_log.err
[2025-07-24 01:36:24] -rw------- 1 boinc boinc       664 Jul 24 01:36 mRRNDmRZey7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmogKLDmvBbo8m.diag
[2025-07-24 01:36:24] -rw-r--r-- 1 boinc boinc     22085 Jul 24 01:36 stderr.txt
[2025-07-24 01:36:24] HITS file was successfully produced:
[2025-07-24 01:36:24] -rw------- 1 boinc boinc 310232589 Jul 24 01:34 shared/HITS.pool.root.1
[2025-07-24 01:36:24]  *** Contents of shared directory: ***
[2025-07-24 01:36:24] total 644072
[2025-07-24 01:36:24] -rw-r--r-- 2 boinc boinc 347779860 Jul 24 00:00 ATLAS.root_0
[2025-07-24 01:36:24] -rw-r--r-- 2 boinc boinc     15095 Jul 24 00:00 start_atlas.sh
[2025-07-24 01:36:24] -rw-r--r-- 2 boinc boinc    542897 Jul 24 00:00 input.tar.gz
[2025-07-24 01:36:24] -rw------- 1 boinc boinc 310232589 Jul 24 01:34 HITS.pool.root.1
[2025-07-24 01:36:24] -rw------- 1 boinc boinc    942080 Jul 24 01:36 result.tar.gz
01:36:26 (1973323): run_atlas exited; CPU time 60143.667190
01:36:26 (1973323): called boinc_finish(0)

</stderr_txt>
]]>

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