Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
12:22:20 (14076): wrapper (7.7.26015): starting
12:22:20 (14076): wrapper: running run_atlas (--nthreads 8)
[2025-07-23 12:22:20] Arguments: --nthreads 8
[2025-07-23 12:22:20] Threads: 8
[2025-07-23 12:22:20] Checking for CVMFS
[2025-07-23 12:22:21] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-23 12:22:21] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-23 12:22:21] Running cvmfs_config stat atlas.cern.ch
[2025-07-23 12:22:21] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-23 12:22:21] 2.11.2.0 30725 174481 377508 148665 2 187 13351268 18432000 3017 130560 0 741916435 99.173 1374492742 37282 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-07-23 12:22:21] CVMFS is ok
[2025-07-23 12:22:21] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-07-23 12:22:21] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-07-23 12:22:21] Further information can be found at the LHC@home message board.
[2025-07-23 12:22:21] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-23 12:22:21] Checking for apptainer binary...
[2025-07-23 12:22:21] Using apptainer found in PATH at /usr/bin/apptainer
[2025-07-23 12:22:21] Running /usr/bin/apptainer --version
[2025-07-23 12:22:21] apptainer version 1.3.2-1.el7
[2025-07-23 12:22:21] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-23 12:22:21] c-210-28.aglt2.org
[2025-07-23 12:22:21] apptainer works
[2025-07-23 12:22:21] Set ATHENA_PROC_NUMBER=8
[2025-07-23 12:22:21] Set ATHENA_CORE_NUMBER=8
[2025-07-23 12:22:21] Starting ATLAS job with PandaID=6741890393
[2025-07-23 12:22:21] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/4 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-23 15:01:58]  *** The last 200 lines of the pilot log: ***
[2025-07-23 15:01:58] 2025-07-23 19:01:22,556 | INFO     | using path: /tmp/boinchome/slots/4/PanDA_Pilot-6741890393/memory_monitor_summary.json (trf name=prmon)
[2025-07-23 15:01:58] 2025-07-23 19:01:22,701 | INFO     | number of running child processes to parent process 24305: 1
[2025-07-23 15:01:58] 2025-07-23 19:01:22,701 | INFO     | maximum number of monitored processes: 6
[2025-07-23 15:01:58] 2025-07-23 19:01:24,669 | INFO     | CPU arch script returned: x86-64-v3
[2025-07-23 15:01:58] 2025-07-23 19:01:24,676 | INFO     | found 20 cores (10 cores per socket, 2 sockets) HT, CPU MHz: 2600.042550000001
[2025-07-23 15:01:58] 2025-07-23 19:01:24,683 | INFO     | using path: /tmp/boinchome/slots/4/PanDA_Pilot-6741890393/memory_monitor_summary.json (trf name=prmon)
[2025-07-23 15:01:58] 2025-07-23 19:01:24,684 | INFO     | extracted standard info from prmon json
[2025-07-23 15:01:58] 2025-07-23 19:01:24,684 | INFO     | extracted standard memory fields from prmon json
[2025-07-23 15:01:58] 2025-07-23 19:01:24,684 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-23 15:01:58] 2025-07-23 19:01:24,684 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-23 15:01:58] 2025-07-23 19:01:24,684 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-23 15:01:58] 2025-07-23 19:01:24,688 | INFO     | fitting pss+swap vs Time
[2025-07-23 15:01:58] 2025-07-23 19:01:24,688 | INFO     | sum of square deviations: 1177156955.0
[2025-07-23 15:01:58] 2025-07-23 19:01:24,689 | INFO     | sum of deviations: 6138932365.500002
[2025-07-23 15:01:58] 2025-07-23 19:01:24,689 | INFO     | mean x: 1753292502.5
[2025-07-23 15:01:58] 2025-07-23 19:01:24,689 | INFO     | mean y: 2564127.0705128205
[2025-07-23 15:01:58] 2025-07-23 19:01:24,690 | INFO     | -- intersect: -9140943919.216946
[2025-07-23 15:01:58] 2025-07-23 19:01:24,690 | INFO     | intersect: -9140943919.216946
[2025-07-23 15:01:58] 2025-07-23 19:01:24,690 | INFO     | chi2: 1.2686308254763072
[2025-07-23 15:01:58] 2025-07-23 19:01:24,690 | INFO     | sum of square deviations: 1067554900.0
[2025-07-23 15:01:58] 2025-07-23 19:01:24,691 | INFO     | sum of deviations: 6078609800.999999
[2025-07-23 15:01:58] 2025-07-23 19:01:24,691 | INFO     | mean x: 1753292350.0
[2025-07-23 15:01:58] 2025-07-23 19:01:24,691 | INFO     | mean y: 2564043.450331126
[2025-07-23 15:01:58] 2025-07-23 19:01:24,692 | INFO     | -- intersect: -9980604094.064959
[2025-07-23 15:01:58] 2025-07-23 19:01:24,692 | INFO     | intersect: -9980604094.064959
[2025-07-23 15:01:58] 2025-07-23 19:01:24,692 | INFO     | chi2: 1.2695830067367209
[2025-07-23 15:01:58] 2025-07-23 19:01:24,692 | INFO     | current chi2=1.2695830067367209 (change=-0.0750558193362624 %)
[2025-07-23 15:01:58] 2025-07-23 19:01:24,692 | INFO     | right removable region: 150
[2025-07-23 15:01:58] 2025-07-23 19:01:24,693 | INFO     | sum of square deviations: 1067554900.0
[2025-07-23 15:01:58] 2025-07-23 19:01:24,693 | INFO     | sum of deviations: -15419164407.000002
[2025-07-23 15:01:58] 2025-07-23 19:01:24,694 | INFO     | mean x: 1753292655.0
[2025-07-23 15:01:58] 2025-07-23 19:01:24,694 | INFO     | mean y: 2593712.509933775
[2025-07-23 15:01:58] 2025-07-23 19:01:24,694 | INFO     | -- intersect: 25326169765.629574
[2025-07-23 15:01:58] 2025-07-23 19:01:24,694 | INFO     | intersect: 25326169765.629574
[2025-07-23 15:01:58] 2025-07-23 19:01:24,694 | INFO     | chi2: 0.03755783705705014
[2025-07-23 15:01:58] 2025-07-23 19:01:24,694 | INFO     | current chi2=0.03755783705705014 (change=97.03949830771698 %)
[2025-07-23 15:01:58] 2025-07-23 19:01:24,695 | INFO     | sum of square deviations: 964976232.5
[2025-07-23 15:01:58] 2025-07-23 19:01:24,696 | INFO     | sum of deviations: -14922319285.0
[2025-07-23 15:01:58] 2025-07-23 19:01:24,696 | INFO     | mean x: 1753292807.5
[2025-07-23 15:01:58] 2025-07-23 19:01:24,696 | INFO     | mean y: 2592961.4109589043
[2025-07-23 15:01:58] 2025-07-23 19:01:24,696 | INFO     | -- intersect: 27115379983.97531
[2025-07-23 15:01:58] 2025-07-23 19:01:24,696 | INFO     | intersect: 27115379983.97531
[2025-07-23 15:01:58] 2025-07-23 19:01:24,696 | INFO     | chi2: 0.0357873946583106
[2025-07-23 15:01:58] 2025-07-23 19:01:24,696 | INFO     | current chi2=0.0357873946583106 (change=4.713909366107123 %)
[2025-07-23 15:01:58] 2025-07-23 19:01:24,697 | INFO     | left removable region: 20
[2025-07-23 15:01:58] 2025-07-23 19:01:24,697 | INFO     | sum of square deviations: 681212772.5
[2025-07-23 15:01:58] 2025-07-23 19:01:24,697 | INFO     | sum of deviations: -11465799272.500004
[2025-07-23 15:01:58] 2025-07-23 19:01:24,698 | INFO     | mean x: 1753292929.5
[2025-07-23 15:01:58] 2025-07-23 19:01:24,698 | INFO     | mean y: 2589102.2384615387
[2025-07-23 15:01:58] 2025-07-23 19:01:24,698 | INFO     | -- intersect: 29513052803.270287
[2025-07-23 15:01:58] 2025-07-23 19:01:24,698 | INFO     | intersect: 29513052803.270287
[2025-07-23 15:01:58] 2025-07-23 19:01:24,698 | INFO     | chi2: 0.0338134875427535
[2025-07-23 15:01:58] 2025-07-23 19:01:24,698 | INFO     | -- intersect: 29513052803.270287
[2025-07-23 15:01:58] 2025-07-23 19:01:24,699 | INFO     | current memory leak: -16.83 B/s (using 130 data points, chi2=0.03)
[2025-07-23 15:01:58] 2025-07-23 19:01:24,699 | INFO     | could have reported an average CPU frequency of 2599 MHz (9 samples)
[2025-07-23 15:01:58] 2025-07-23 19:01:24,699 | INFO     | ..............................
[2025-07-23 15:01:58] 2025-07-23 19:01:24,699 | INFO     | . Timing measurements:
[2025-07-23 15:01:58] 2025-07-23 19:01:24,699 | INFO     | . get job = 0 s
[2025-07-23 15:01:58] 2025-07-23 19:01:24,699 | INFO     | . initial setup = 2 s
[2025-07-23 15:01:58] 2025-07-23 19:01:24,700 | INFO     | . payload setup = 5 s
[2025-07-23 15:01:58] 2025-07-23 19:01:24,700 | INFO     | . stage-in = 0 s
[2025-07-23 15:01:58] 2025-07-23 19:01:24,700 | INFO     | . payload execution = 9504 s
[2025-07-23 15:01:58] 2025-07-23 19:01:24,700 | INFO     | . stage-out = 0 s
[2025-07-23 15:01:58] 2025-07-23 19:01:24,700 | INFO     | . log creation = 0 s
[2025-07-23 15:01:58] 2025-07-23 19:01:24,700 | INFO     | ..............................
[2025-07-23 15:01:58] 2025-07-23 19:01:25,112 | INFO     | 
[2025-07-23 15:01:58] 2025-07-23 19:01:25,113 | INFO     | job summary report
[2025-07-23 15:01:58] 2025-07-23 19:01:25,113 | INFO     | --------------------------------------------------
[2025-07-23 15:01:58] 2025-07-23 19:01:25,113 | INFO     | PanDA job id: 6741890393
[2025-07-23 15:01:58] 2025-07-23 19:01:25,113 | INFO     | task id: 45697472
[2025-07-23 15:01:58] 2025-07-23 19:01:25,113 | INFO     | errors: (none)
[2025-07-23 15:01:58] 2025-07-23 19:01:25,113 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-23 15:01:58] 2025-07-23 19:01:25,114 | INFO     | pilot state: finished 
[2025-07-23 15:01:58] 2025-07-23 19:01:25,114 | INFO     | transexitcode: 0
[2025-07-23 15:01:58] 2025-07-23 19:01:25,114 | INFO     | exeerrorcode: 0
[2025-07-23 15:01:58] 2025-07-23 19:01:25,114 | INFO     | exeerrordiag: 
[2025-07-23 15:01:58] 2025-07-23 19:01:25,114 | INFO     | exitcode: 0
[2025-07-23 15:01:58] 2025-07-23 19:01:25,114 | INFO     | exitmsg: OK
[2025-07-23 15:01:58] 2025-07-23 19:01:25,114 | INFO     | cpuconsumptiontime: 71206 s
[2025-07-23 15:01:58] 2025-07-23 19:01:25,114 | INFO     | nevents: 400
[2025-07-23 15:01:58] 2025-07-23 19:01:25,114 | INFO     | neventsw: 0
[2025-07-23 15:01:58] 2025-07-23 19:01:25,114 | INFO     | pid: 24305
[2025-07-23 15:01:58] 2025-07-23 19:01:25,114 | INFO     | pgrp: 24305
[2025-07-23 15:01:58] 2025-07-23 19:01:25,114 | INFO     | corecount: 8
[2025-07-23 15:01:58] 2025-07-23 19:01:25,114 | INFO     | event service: False
[2025-07-23 15:01:58] 2025-07-23 19:01:25,114 | INFO     | sizes: {0: 2397534, 3: 2397796, 11: 2397824, 9513: 2426340, 9514: 2435394, 9519: 2435596}
[2025-07-23 15:01:58] 2025-07-23 19:01:25,115 | INFO     | --------------------------------------------------
[2025-07-23 15:01:58] 2025-07-23 19:01:25,115 | INFO     | 
[2025-07-23 15:01:58] 2025-07-23 19:01:25,115 | INFO     | executing command: ls -lF /tmp/boinchome/slots/4
[2025-07-23 15:01:58] 2025-07-23 19:01:25,129 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-23 15:01:58] 2025-07-23 19:01:25,129 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-23 15:01:58] 2025-07-23 19:01:25,129 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-23 15:01:58] 2025-07-23 19:01:25,129 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-23 15:01:58] 2025-07-23 19:01:25,129 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-23 15:01:58] 2025-07-23 19:01:25,129 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-23 15:01:58] 2025-07-23 19:01:25,129 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-23 15:01:58] 2025-07-23 19:01:25,129 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-23 15:01:58] 2025-07-23 19:01:25,129 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-23 15:01:58] 2025-07-23 19:01:25,129 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-23 15:01:58] 2025-07-23 19:01:25,129 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-23 15:01:58] 2025-07-23 19:01:25,130 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-23 15:01:58] 2025-07-23 19:01:25,130 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-23 15:01:58] 2025-07-23 19:01:25,130 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-23 15:01:58] 2025-07-23 19:01:25,130 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-23 15:01:58] 2025-07-23 19:01:25,130 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-23 15:01:58] 2025-07-23 19:01:25,130 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-23 15:01:58] 2025-07-23 19:01:25,130 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-23 15:01:58] 2025-07-23 19:01:25,130 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-23 15:01:58] 2025-07-23 19:01:25,130 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-23 15:01:58] 2025-07-23 19:01:25,130 | INFO     | job 6741890393 has completed (purged errors)
[2025-07-23 15:01:58] 2025-07-23 19:01:25,130 | INFO     | overall cleanup function is called
[2025-07-23 15:01:58] 2025-07-23 19:01:26,137 | INFO     | --- collectZombieJob: --- 10, [24305]
[2025-07-23 15:01:58] 2025-07-23 19:01:26,138 | INFO     | zombie collector waiting for pid 24305
[2025-07-23 15:01:58] 2025-07-23 19:01:26,138 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-23 15:01:58] 2025-07-23 19:01:26,138 | INFO     | collected zombie processes
[2025-07-23 15:01:58] 2025-07-23 19:01:26,138 | INFO     | will attempt to kill all subprocesses of pid=24305
[2025-07-23 15:01:58] 2025-07-23 19:01:26,265 | INFO     | process IDs to be killed: [24305] (in reverse order)
[2025-07-23 15:01:58] 2025-07-23 19:01:26,313 | WARNING  | found no corresponding commands to process id(s)
[2025-07-23 15:01:58] 2025-07-23 19:01:26,313 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-23 15:01:58] 2025-07-23 19:01:26,317 | INFO     | did not find any defunct processes belonging to 24305
[2025-07-23 15:01:58] 2025-07-23 19:01:26,321 | INFO     | did not find any defunct processes belonging to 24305
[2025-07-23 15:01:58] 2025-07-23 19:01:26,321 | INFO     | ready for new job
[2025-07-23 15:01:58] 2025-07-23 19:01:26,321 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-23 15:01:58] 2025-07-23 19:01:26,323 | INFO     | ***************************************
[2025-07-23 15:01:58] 2025-07-23 19:01:26,323 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-23 15:01:58] 2025-07-23 19:01:26,323 | INFO     | ***************************************
[2025-07-23 15:01:58] 2025-07-23 19:01:26,323 | INFO     | 
[2025-07-23 15:01:58] 2025-07-23 19:01:26,325 | INFO     | architecture information:
[2025-07-23 15:01:58] 2025-07-23 19:01:26,326 | INFO     | executing command: cat /etc/os-release
[2025-07-23 15:01:58] 2025-07-23 19:01:26,335 | INFO     | cat /etc/os-release:
[2025-07-23 15:01:58] NAME="CentOS Linux"
[2025-07-23 15:01:58] VERSION="7 (Core)"
[2025-07-23 15:01:58] ID="centos"
[2025-07-23 15:01:58] ID_LIKE="rhel fedora"
[2025-07-23 15:01:58] VERSION_ID="7"
[2025-07-23 15:01:58] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-23 15:01:58] ANSI_COLOR="0;31"
[2025-07-23 15:01:58] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-23 15:01:58] HOME_URL="https://www.centos.org/"
[2025-07-23 15:01:58] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-23 15:01:58] 
[2025-07-23 15:01:58] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-23 15:01:58] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-23 15:01:58] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-23 15:01:58] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-23 15:01:58] 
[2025-07-23 15:01:58] 2025-07-23 19:01:26,336 | INFO     | ***************************************
[2025-07-23 15:01:58] 2025-07-23 19:01:26,836 | INFO     | executing command: df -mP /tmp/boinchome/slots/4
[2025-07-23 15:01:58] 2025-07-23 19:01:26,849 | INFO     | sufficient remaining disk space (53904146432 B)
[2025-07-23 15:01:58] 2025-07-23 19:01:26,849 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-23 15:01:58] 2025-07-23 19:01:26,849 | INFO     | current server update state: UPDATING_FINAL
[2025-07-23 15:01:58] 2025-07-23 19:01:26,849 | INFO     | update_server=False
[2025-07-23 15:01:58] 2025-07-23 19:01:26,850 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-23 15:01:58] 2025-07-23 19:01:26,850 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-23 15:01:58] 2025-07-23 19:01:26,850 | INFO     | aborting loop
[2025-07-23 15:01:58] 2025-07-23 19:01:27,296 | INFO     | all job control threads have been joined
[2025-07-23 15:01:58] 2025-07-23 19:01:27,440 | INFO     | all data control threads have been joined
[2025-07-23 15:01:58] 2025-07-23 19:01:27,539 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-23 15:01:58] 2025-07-23 19:01:27,855 | INFO     | [job] retrieve thread has finished
[2025-07-23 15:01:58] 2025-07-23 19:01:27,855 | INFO     | [job] job monitor thread has finished
[2025-07-23 15:01:58] 2025-07-23 19:01:28,059 | INFO     | all payload control threads have been joined
[2025-07-23 15:01:58] 2025-07-23 19:01:28,149 | INFO     | [payload] validate_pre thread has finished
[2025-07-23 15:01:58] 2025-07-23 19:01:28,173 | INFO     | [job] validate thread has finished
[2025-07-23 15:01:58] 2025-07-23 19:01:28,264 | INFO     | [data] copytool_in thread has finished
[2025-07-23 15:01:58] 2025-07-23 19:01:28,270 | INFO     | [job] create_data_payload thread has finished
[2025-07-23 15:01:58] 2025-07-23 19:01:28,300 | INFO     | [job] control thread has finished
[2025-07-23 15:01:58] 2025-07-23 19:01:28,370 | INFO     | [payload] execute_payloads thread has finished
[2025-07-23 15:01:58] 2025-07-23 19:01:28,444 | INFO     | [data] control thread has finished
[2025-07-23 15:01:58] 2025-07-23 19:01:28,725 | INFO     | [payload] failed_post thread has finished
[2025-07-23 15:01:58] 2025-07-23 19:01:29,065 | INFO     | [payload] control thread has finished
[2025-07-23 15:01:58] 2025-07-23 19:01:29,348 | INFO     | [payload] validate_post thread has finished
[2025-07-23 15:01:58] 2025-07-23 19:01:29,544 | INFO     | [data] copytool_out thread has finished
[2025-07-23 15:01:58] 2025-07-23 19:01:29,823 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-23 15:01:58] 2025-07-23 19:01:30,095 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-23 15:01:58] 2025-07-23 19:01:30,828 | INFO     | [job] queue monitor thread has finished
[2025-07-23 15:01:58] 2025-07-23 19:01:34,100 | INFO     | [data] queue_monitor thread has finished
[2025-07-23 15:01:58] 2025-07-23 19:01:37,763 | INFO     | job.realtimelogging is not enabled
[2025-07-23 15:01:58] 2025-07-23 19:01:38,768 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-23 15:01:58] 2025-07-23 19:01:40,547 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140087300351808)>', '<ExcThread(monitor, started 140086716913408)>']
[2025-07-23 15:01:58] 2025-07-23 19:01:45,571 | INFO     | all workflow threads have been joined
[2025-07-23 15:01:58] 2025-07-23 19:01:45,572 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-23 15:01:58] 2025-07-23 19:01:45,572 | INFO     | traces error code: 0
[2025-07-23 15:01:58] 2025-07-23 19:01:45,572 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-23 15:01:58] 2025-07-23 19:01:58,025 | INFO     | PID=17738 has CPU usage=4.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-07-23 15:01:58] 2025-07-23 19:01:58,026 | INFO     | .. there are 5 such processes running
[2025-07-23 15:01:58] 2025-07-23 19:01:58,026 | INFO     | found 0 job(s) in 20 queues
[2025-07-23 15:01:58] 2025-07-23 19:01:58,026 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-23 15:01:58] 2025-07-23 19:01:58,026 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-23 15:01:58] 2025-07-23 19:01:58,026 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-23 15:01:58] 2025-07-23 19:01:58,026 | INFO     | [monitor] control thread has ended
[2025-07-23 15:01:58] 2025-07-23 19:01:58,103 [wrapper] ==== pilot stdout END ====
[2025-07-23 15:01:58] 2025-07-23 19:01:58,105 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-23 15:01:58] 2025-07-23 19:01:58,107 [wrapper] pilotpid: 17738
[2025-07-23 15:01:58] 2025-07-23 19:01:58,109 [wrapper] Pilot exit status: 0
[2025-07-23 15:01:58] 2025-07-23 19:01:58,118 [wrapper] pandaids: 6741890393
[2025-07-23 15:01:58] 2025-07-23 19:01:58,151 [wrapper] cleanup supervisor_pilot 19038 17739
[2025-07-23 15:01:58] 2025-07-23 19:01:58,153 [wrapper] Test setup, not cleaning
[2025-07-23 15:01:58] 2025-07-23 19:01:58,155 [wrapper] apfmon messages muted
[2025-07-23 15:01:58] 2025-07-23 19:01:58,158 [wrapper] ==== wrapper stdout END ====
[2025-07-23 15:01:58] 2025-07-23 19:01:58,160 [wrapper] ==== wrapper stderr END ====
[2025-07-23 15:01:58]  *** Error codes and diagnostics ***
[2025-07-23 15:01:58]     "exeErrorCode": 0,
[2025-07-23 15:01:58]     "exeErrorDiag": "",
[2025-07-23 15:01:58]     "pilotErrorCode": 0,
[2025-07-23 15:01:58]     "pilotErrorDiag": "",
[2025-07-23 15:01:58]  *** Listing of results directory ***
[2025-07-23 15:01:58] total 605932
[2025-07-23 15:01:58] -rw-r--r-- 1 boincer umatlas    530466 Jul 23 04:22 pilot3.tar.gz
[2025-07-23 15:01:58] -rwx------ 1 boincer umatlas     36292 Jul 23 04:29 runpilot2-wrapper.sh
[2025-07-23 15:01:58] -rw-r--r-- 1 boincer umatlas      5112 Jul 23 04:29 queuedata.json
[2025-07-23 15:01:58] -rw-r--r-- 1 boincer umatlas       100 Jul 23 12:22 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-23 15:01:58] -rwxr-xr-x 1 boincer umatlas      7986 Jul 23 12:22 run_atlas
[2025-07-23 15:01:58] -rw-r--r-- 1 boincer umatlas       105 Jul 23 12:22 job.xml
[2025-07-23 15:01:58] -rw-r--r-- 2 boincer umatlas 333685629 Jul 23 12:22 EVNT.45697470._000205.pool.root.1
[2025-07-23 15:01:58] -rw-r--r-- 2 boincer umatlas     15095 Jul 23 12:22 start_atlas.sh
[2025-07-23 15:01:58] drwxrwx--x 2 boincer umatlas      4096 Jul 23 12:22 shared
[2025-07-23 15:01:58] -rw-r--r-- 2 boincer umatlas    542900 Jul 23 12:22 input.tar.gz
[2025-07-23 15:01:58] -rw-r--r-- 1 boincer umatlas         0 Jul 23 12:22 boinc_lockfile
[2025-07-23 15:01:58] -rw-r--r-- 1 boincer umatlas      2612 Jul 23 12:22 pandaJob.out
[2025-07-23 15:01:58] -rw------- 1 boincer umatlas    978487 Jul 23 12:22 agis_schedconf.cvmfs.json
[2025-07-23 15:01:58] -rw------- 1 boincer umatlas   1593041 Jul 23 12:22 agis_ddmendpoints.agis.ALL.json
[2025-07-23 15:01:58] drwx------ 4 boincer umatlas      4096 Jul 23 12:22 pilot3
[2025-07-23 15:01:58] -rw-r--r-- 1 boincer umatlas      6228 Jul 23 14:56 init_data.xml
[2025-07-23 15:01:58] -rw------- 1 boincer umatlas 280453375 Jul 23 15:00 HITS.45697472._004531.pool.root.1
[2025-07-23 15:01:58] -rw-r--r-- 1 boincer umatlas       529 Jul 23 15:00 boinc_task_state.xml
[2025-07-23 15:01:58] -rw------- 1 boincer umatlas      1049 Jul 23 15:01 memory_monitor_summary.json
[2025-07-23 15:01:58] -rw------- 1 boincer umatlas    345955 Jul 23 15:01 log.45697472._004531.job.log.tgz.1
[2025-07-23 15:01:58] -rw------- 1 boincer umatlas      7838 Jul 23 15:01 heartbeat.json
[2025-07-23 15:01:58] -rw-r--r-- 1 boincer umatlas      8192 Jul 23 15:01 boinc_mmap_file
[2025-07-23 15:01:58] -rw-r--r-- 1 boincer umatlas        27 Jul 23 15:01 wrapper_checkpoint.txt
[2025-07-23 15:01:58] -rw------- 1 boincer umatlas        95 Jul 23 15:01 pilot_heartbeat.json
[2025-07-23 15:01:58] -rw------- 1 boincer umatlas       820 Jul 23 15:01 pilotlog.txt
[2025-07-23 15:01:58] -rw------- 1 boincer umatlas    884854 Jul 23 15:01 log.45697472._004531.job.log.1
[2025-07-23 15:01:58] -rw------- 1 boincer umatlas       357 Jul 23 15:01 output.list
[2025-07-23 15:01:58] -rw-r--r-- 1 boincer umatlas       620 Jul 23 15:01 runtime_log
[2025-07-23 15:01:58] -rw------- 1 boincer umatlas   1249280 Jul 23 15:01 result.tar.gz
[2025-07-23 15:01:58] -rw-r--r-- 1 boincer umatlas      8660 Jul 23 15:01 runtime_log.err
[2025-07-23 15:01:58] -rw------- 1 boincer umatlas       657 Jul 23 15:01 1JBLDmv1jy7n9Rq4apOajLDm4fhM0noT9bVof3QYDm2yvKDmI7AJ6n.diag
[2025-07-23 15:01:58] -rw-r--r-- 1 boincer umatlas     21095 Jul 23 15:01 stderr.txt
[2025-07-23 15:01:58] HITS file was successfully produced:
[2025-07-23 15:01:58] -rw------- 1 boincer umatlas 280453375 Jul 23 15:00 shared/HITS.pool.root.1
[2025-07-23 15:01:58]  *** Contents of shared directory: ***
[2025-07-23 15:01:58] total 601524
[2025-07-23 15:01:58] -rw-r--r-- 2 boincer umatlas 333685629 Jul 23 12:22 ATLAS.root_0
[2025-07-23 15:01:58] -rw-r--r-- 2 boincer umatlas     15095 Jul 23 12:22 start_atlas.sh
[2025-07-23 15:01:58] -rw-r--r-- 2 boincer umatlas    542900 Jul 23 12:22 input.tar.gz
[2025-07-23 15:01:58] -rw------- 1 boincer umatlas 280453375 Jul 23 15:00 HITS.pool.root.1
[2025-07-23 15:01:58] -rw------- 1 boincer umatlas   1249280 Jul 23 15:01 result.tar.gz
15:01:59 (14076): run_atlas exited; CPU time 71323.148154
15:01:59 (14076): called boinc_finish(0)

</stderr_txt>
]]>

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