Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
12:13:22 (1641650): wrapper (7.7.26015): starting
12:13:22 (1641650): wrapper: running run_atlas (--nthreads 8)
[2025-07-23 12:13:22] Arguments: --nthreads 8
[2025-07-23 12:13:22] Threads: 8
[2025-07-23 12:13:22] Checking for CVMFS
[2025-07-23 12:13:22] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-23 12:13:22] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-23 12:13:22] Running cvmfs_config stat atlas.cern.ch
[2025-07-23 12:13:22] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-23 12:13:22] 2.12.6.0 2554489 12826 326520 148664 2 350 24535000 40960001 13824 16776704 0 39891813 99.784 41731135 22442 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-07-23 12:13:22] CVMFS is ok
[2025-07-23 12:13:22] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-07-23 12:13:22] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-07-23 12:13:22] Further information can be found at the LHC@home message board.
[2025-07-23 12:13:22] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-23 12:13:22] Checking for apptainer binary...
[2025-07-23 12:13:22] Using apptainer found in PATH at /usr/bin/apptainer
[2025-07-23 12:13:22] Running /usr/bin/apptainer --version
[2025-07-23 12:13:22] apptainer version 1.4.1-1.el9
[2025-07-23 12:13:22] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-23 12:13:22] c7-13-33.aglt2.org
[2025-07-23 12:13:22] apptainer works
[2025-07-23 12:13:22] Set ATHENA_PROC_NUMBER=8
[2025-07-23 12:13:22] Set ATHENA_CORE_NUMBER=8
[2025-07-23 12:13:22] Starting ATLAS job with PandaID=6741883995
[2025-07-23 12:13:22] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-23 15:38:57]  *** The last 200 lines of the pilot log: ***
[2025-07-23 15:38:58] 2025-07-23 19:38:20,547 | INFO     | monitor loop #840: job 0:6741883995 is in state 'finished'
[2025-07-23 15:38:58] 2025-07-23 19:38:20,547 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-23 15:38:58] 2025-07-23 19:38:22,471 | INFO     | PID=1647664 has CPU usage=6.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-07-23 15:38:58] 2025-07-23 19:38:22,472 | INFO     | .. there are 15 such processes running
[2025-07-23 15:38:58] 2025-07-23 19:38:22,800 | INFO     | CPU arch script returned: x86-64-v3
[2025-07-23 15:38:58] 2025-07-23 19:38:22,818 | INFO     | found 32 cores (16 cores per socket, 2 sockets) HT, CPU MHz: 3285.718281249999
[2025-07-23 15:38:58] 2025-07-23 19:38:22,829 | INFO     | using path: /tmp/boinchome/slots/1/PanDA_Pilot-6741883995/memory_monitor_summary.json (trf name=prmon)
[2025-07-23 15:38:58] 2025-07-23 19:38:22,829 | INFO     | extracted standard info from prmon json
[2025-07-23 15:38:58] 2025-07-23 19:38:22,829 | INFO     | extracted standard memory fields from prmon json
[2025-07-23 15:38:58] 2025-07-23 19:38:22,829 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-23 15:38:58] 2025-07-23 19:38:22,830 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-23 15:38:58] 2025-07-23 19:38:22,830 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-23 15:38:58] 2025-07-23 19:38:22,832 | INFO     | fitting pss+swap vs Time
[2025-07-23 15:38:58] 2025-07-23 19:38:22,833 | INFO     | sum of square deviations: 2517869820.9054556
[2025-07-23 15:38:58] 2025-07-23 19:38:22,834 | INFO     | sum of deviations: 10973695343.502495
[2025-07-23 15:38:58] 2025-07-23 19:38:22,834 | INFO     | mean x: 1753293339.159204
[2025-07-23 15:38:58] 2025-07-23 19:38:22,834 | INFO     | mean y: 2189066.890547264
[2025-07-23 15:38:58] 2025-07-23 19:38:22,834 | INFO     | -- intersect: -7639233373.609704
[2025-07-23 15:38:58] 2025-07-23 19:38:22,834 | INFO     | intersect: -7639233373.609704
[2025-07-23 15:38:58] 2025-07-23 19:38:22,834 | INFO     | chi2: 1.453859434667267
[2025-07-23 15:38:58] 2025-07-23 19:38:22,835 | INFO     | sum of square deviations: 2334601725.7754984
[2025-07-23 15:38:58] 2025-07-23 19:38:22,836 | INFO     | sum of deviations: 12322077471.183674
[2025-07-23 15:38:58] 2025-07-23 19:38:22,836 | INFO     | mean x: 1753293186.6632652
[2025-07-23 15:38:58] 2025-07-23 19:38:22,836 | INFO     | mean y: 2190185.775510204
[2025-07-23 15:38:58] 2025-07-23 19:38:22,836 | INFO     | -- intersect: -9251728475.055964
[2025-07-23 15:38:58] 2025-07-23 19:38:22,836 | INFO     | intersect: -9251728475.055964
[2025-07-23 15:38:58] 2025-07-23 19:38:22,836 | INFO     | chi2: 1.4524008017964551
[2025-07-23 15:38:58] 2025-07-23 19:38:22,836 | INFO     | current chi2=1.4524008017964551 (change=0.10032832858740318 %)
[2025-07-23 15:38:58] 2025-07-23 19:38:22,836 | INFO     | right removable region: 195
[2025-07-23 15:38:58] 2025-07-23 19:38:22,836 | INFO     | sum of square deviations: 2334582205.7754984
[2025-07-23 15:38:58] 2025-07-23 19:38:22,837 | INFO     | sum of deviations: -15641028453.551022
[2025-07-23 15:38:58] 2025-07-23 19:38:22,837 | INFO     | mean x: 1753293491.6632652
[2025-07-23 15:38:58] 2025-07-23 19:38:22,838 | INFO     | mean y: 2210980.173469388
[2025-07-23 15:38:58] 2025-07-23 19:38:22,838 | INFO     | -- intersect: 11748772451.724442
[2025-07-23 15:38:58] 2025-07-23 19:38:22,838 | INFO     | intersect: 11748772451.724442
[2025-07-23 15:38:58] 2025-07-23 19:38:22,839 | INFO     | chi2: 0.08194364693368558
[2025-07-23 15:38:58] 2025-07-23 19:38:22,839 | INFO     | current chi2=0.08194364693368558 (change=94.3637159838331 %)
[2025-07-23 15:38:58] 2025-07-23 19:38:22,839 | INFO     | sum of square deviations: 2160411040.6387534
[2025-07-23 15:38:58] 2025-07-23 19:38:22,840 | INFO     | sum of deviations: -15775005267.795809
[2025-07-23 15:38:58] 2025-07-23 19:38:22,840 | INFO     | mean x: 1753293644.1675394
[2025-07-23 15:38:58] 2025-07-23 19:38:22,840 | INFO     | mean y: 2211098.77486911
[2025-07-23 15:38:58] 2025-07-23 19:38:22,840 | INFO     | -- intersect: 12804504714.418648
[2025-07-23 15:38:58] 2025-07-23 19:38:22,840 | INFO     | intersect: 12804504714.418648
[2025-07-23 15:38:58] 2025-07-23 19:38:22,840 | INFO     | chi2: 0.07894849288290708
[2025-07-23 15:38:58] 2025-07-23 19:38:22,841 | INFO     | current chi2=0.07894849288290708 (change=3.655138821441997 %)
[2025-07-23 15:38:58] 2025-07-23 19:38:22,841 | INFO     | left removable region: 20
[2025-07-23 15:38:58] 2025-07-23 19:38:22,841 | INFO     | sum of square deviations: 1661695776.834289
[2025-07-23 15:38:58] 2025-07-23 19:38:22,842 | INFO     | sum of deviations: -10279522590.53714
[2025-07-23 15:38:58] 2025-07-23 19:38:22,842 | INFO     | mean x: 1753293766.1542857
[2025-07-23 15:38:58] 2025-07-23 19:38:22,842 | INFO     | mean y: 2209530.982857143
[2025-07-23 15:38:58] 2025-07-23 19:38:22,842 | INFO     | -- intersect: 10848372305.354671
[2025-07-23 15:38:58] 2025-07-23 19:38:22,842 | INFO     | intersect: 10848372305.354671
[2025-07-23 15:38:58] 2025-07-23 19:38:22,842 | INFO     | chi2: 0.0750306357059403
[2025-07-23 15:38:58] 2025-07-23 19:38:22,842 | INFO     | -- intersect: 10848372305.354671
[2025-07-23 15:38:58] 2025-07-23 19:38:22,842 | INFO     | current memory leak: -6.19 B/s (using 175 data points, chi2=0.08)
[2025-07-23 15:38:58] 2025-07-23 19:38:22,842 | INFO     | could have reported an average CPU frequency of 3270 MHz (10 samples)
[2025-07-23 15:38:58] 2025-07-23 19:38:22,843 | INFO     | ..............................
[2025-07-23 15:38:58] 2025-07-23 19:38:22,843 | INFO     | . Timing measurements:
[2025-07-23 15:38:58] 2025-07-23 19:38:22,843 | INFO     | . get job = 0 s
[2025-07-23 15:38:58] 2025-07-23 19:38:22,843 | INFO     | . initial setup = 2 s
[2025-07-23 15:38:58] 2025-07-23 19:38:22,843 | INFO     | . payload setup = 6 s
[2025-07-23 15:38:58] 2025-07-23 19:38:22,843 | INFO     | . stage-in = 0 s
[2025-07-23 15:38:58] 2025-07-23 19:38:22,843 | INFO     | . payload execution = 12242 s
[2025-07-23 15:38:58] 2025-07-23 19:38:22,843 | INFO     | . stage-out = 3 s
[2025-07-23 15:38:58] 2025-07-23 19:38:22,843 | INFO     | . log creation = 0 s
[2025-07-23 15:38:58] 2025-07-23 19:38:22,843 | INFO     | ..............................
[2025-07-23 15:38:58] 2025-07-23 19:38:23,286 | INFO     | 
[2025-07-23 15:38:58] 2025-07-23 19:38:23,286 | INFO     | job summary report
[2025-07-23 15:38:58] 2025-07-23 19:38:23,286 | INFO     | --------------------------------------------------
[2025-07-23 15:38:58] 2025-07-23 19:38:23,286 | INFO     | PanDA job id: 6741883995
[2025-07-23 15:38:58] 2025-07-23 19:38:23,286 | INFO     | task id: 45697472
[2025-07-23 15:38:58] 2025-07-23 19:38:23,286 | INFO     | errors: (none)
[2025-07-23 15:38:58] 2025-07-23 19:38:23,287 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-23 15:38:58] 2025-07-23 19:38:23,287 | INFO     | pilot state: finished 
[2025-07-23 15:38:58] 2025-07-23 19:38:23,287 | INFO     | transexitcode: 0
[2025-07-23 15:38:58] 2025-07-23 19:38:23,287 | INFO     | exeerrorcode: 0
[2025-07-23 15:38:58] 2025-07-23 19:38:23,287 | INFO     | exeerrordiag: 
[2025-07-23 15:38:58] 2025-07-23 19:38:23,287 | INFO     | exitcode: 0
[2025-07-23 15:38:58] 2025-07-23 19:38:23,287 | INFO     | exitmsg: OK
[2025-07-23 15:38:58] 2025-07-23 19:38:23,287 | INFO     | cpuconsumptiontime: 46384 s
[2025-07-23 15:38:58] 2025-07-23 19:38:23,287 | INFO     | nevents: 400
[2025-07-23 15:38:58] 2025-07-23 19:38:23,287 | INFO     | neventsw: 0
[2025-07-23 15:38:58] 2025-07-23 19:38:23,287 | INFO     | pid: 1659769
[2025-07-23 15:38:58] 2025-07-23 19:38:23,287 | INFO     | pgrp: 1659769
[2025-07-23 15:38:58] 2025-07-23 19:38:23,287 | INFO     | corecount: 8
[2025-07-23 15:38:58] 2025-07-23 19:38:23,287 | INFO     | event service: False
[2025-07-23 15:38:58] 2025-07-23 19:38:23,287 | INFO     | sizes: {0: 2397363, 1: 2397562, 4: 2397824, 11: 2397852, 12252: 2427881, 12256: 2436879, 12258: 2437063, 12274: 2437257}
[2025-07-23 15:38:58] 2025-07-23 19:38:23,287 | INFO     | --------------------------------------------------
[2025-07-23 15:38:58] 2025-07-23 19:38:23,287 | INFO     | 
[2025-07-23 15:38:58] 2025-07-23 19:38:23,288 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2025-07-23 15:38:58] 2025-07-23 19:38:23,539 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-23 15:38:58] 2025-07-23 19:38:23,539 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-23 15:38:58] 2025-07-23 19:38:23,539 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-23 15:38:58] 2025-07-23 19:38:23,539 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-23 15:38:58] 2025-07-23 19:38:23,540 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-23 15:38:58] 2025-07-23 19:38:23,540 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-23 15:38:58] 2025-07-23 19:38:23,540 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-23 15:38:58] 2025-07-23 19:38:23,540 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-23 15:38:58] 2025-07-23 19:38:23,540 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-23 15:38:58] 2025-07-23 19:38:23,540 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-23 15:38:58] 2025-07-23 19:38:23,540 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-23 15:38:58] 2025-07-23 19:38:23,540 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-23 15:38:58] 2025-07-23 19:38:23,540 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-23 15:38:58] 2025-07-23 19:38:23,540 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-23 15:38:58] 2025-07-23 19:38:23,540 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-23 15:38:58] 2025-07-23 19:38:23,540 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-23 15:38:58] 2025-07-23 19:38:23,540 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-23 15:38:58] 2025-07-23 19:38:23,540 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-23 15:38:58] 2025-07-23 19:38:23,540 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-23 15:38:58] 2025-07-23 19:38:23,540 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-23 15:38:58] 2025-07-23 19:38:23,541 | INFO     | job 6741883995 has completed (purged errors)
[2025-07-23 15:38:58] 2025-07-23 19:38:23,541 | INFO     | overall cleanup function is called
[2025-07-23 15:38:58] 2025-07-23 19:38:24,560 | INFO     | --- collectZombieJob: --- 10, [1659769]
[2025-07-23 15:38:58] 2025-07-23 19:38:24,560 | INFO     | zombie collector waiting for pid 1659769
[2025-07-23 15:38:58] 2025-07-23 19:38:24,560 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-23 15:38:58] 2025-07-23 19:38:24,560 | INFO     | collected zombie processes
[2025-07-23 15:38:58] 2025-07-23 19:38:24,560 | INFO     | will attempt to kill all subprocesses of pid=1659769
[2025-07-23 15:38:58] 2025-07-23 19:38:25,590 | INFO     | process IDs to be killed: [1659769] (in reverse order)
[2025-07-23 15:38:58] 2025-07-23 19:38:26,073 | WARNING  | found no corresponding commands to process id(s)
[2025-07-23 15:38:58] 2025-07-23 19:38:26,073 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-23 15:38:58] 2025-07-23 19:38:26,166 | INFO     | did not find any defunct processes belonging to 1659769
[2025-07-23 15:38:58] 2025-07-23 19:38:26,271 | INFO     | did not find any defunct processes belonging to 1659769
[2025-07-23 15:38:58] 2025-07-23 19:38:26,271 | INFO     | ready for new job
[2025-07-23 15:38:58] 2025-07-23 19:38:26,271 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-23 15:38:58] 2025-07-23 19:38:26,273 | INFO     | ***************************************
[2025-07-23 15:38:58] 2025-07-23 19:38:26,273 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-23 15:38:58] 2025-07-23 19:38:26,273 | INFO     | ***************************************
[2025-07-23 15:38:58] 2025-07-23 19:38:26,273 | INFO     | 
[2025-07-23 15:38:58] 2025-07-23 19:38:26,304 | INFO     | architecture information:
[2025-07-23 15:38:58] 2025-07-23 19:38:26,337 | INFO     | executing command: cat /etc/os-release
[2025-07-23 15:38:58] 2025-07-23 19:38:26,563 | INFO     | cat /etc/os-release:
[2025-07-23 15:38:58] NAME="CentOS Linux"
[2025-07-23 15:38:58] VERSION="7 (Core)"
[2025-07-23 15:38:58] ID="centos"
[2025-07-23 15:38:58] ID_LIKE="rhel fedora"
[2025-07-23 15:38:58] VERSION_ID="7"
[2025-07-23 15:38:58] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-23 15:38:58] ANSI_COLOR="0;31"
[2025-07-23 15:38:58] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-23 15:38:58] HOME_URL="https://www.centos.org/"
[2025-07-23 15:38:58] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-23 15:38:58] 
[2025-07-23 15:38:58] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-23 15:38:58] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-23 15:38:58] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-23 15:38:58] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-23 15:38:58] 
[2025-07-23 15:38:58] 2025-07-23 19:38:26,564 | INFO     | ***************************************
[2025-07-23 15:38:58] 2025-07-23 19:38:27,067 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2025-07-23 15:38:58] 2025-07-23 19:38:27,135 | INFO     | sufficient remaining disk space (85467332608 B)
[2025-07-23 15:38:58] 2025-07-23 19:38:27,136 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-23 15:38:58] 2025-07-23 19:38:27,136 | INFO     | current server update state: UPDATING_FINAL
[2025-07-23 15:38:58] 2025-07-23 19:38:27,136 | INFO     | update_server=False
[2025-07-23 15:38:58] 2025-07-23 19:38:27,136 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-23 15:38:58] 2025-07-23 19:38:27,137 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-23 15:38:58] 2025-07-23 19:38:27,144 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-23 15:38:58] 2025-07-23 19:38:27,144 | INFO     | aborting loop
[2025-07-23 15:38:58] 2025-07-23 19:38:27,238 | INFO     | all job control threads have been joined
[2025-07-23 15:38:58] 2025-07-23 19:38:27,598 | INFO     | all data control threads have been joined
[2025-07-23 15:38:58] 2025-07-23 19:38:27,682 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-23 15:38:58] 2025-07-23 19:38:27,689 | INFO     | all payload control threads have been joined
[2025-07-23 15:38:58] 2025-07-23 19:38:27,941 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-23 15:38:58] 2025-07-23 19:38:28,142 | INFO     | [job] retrieve thread has finished
[2025-07-23 15:38:58] 2025-07-23 19:38:28,150 | INFO     | [job] job monitor thread has finished
[2025-07-23 15:38:58] 2025-07-23 19:38:28,153 | INFO     | [payload] validate_post thread has finished
[2025-07-23 15:38:58] 2025-07-23 19:38:28,239 | INFO     | [job] control thread has finished
[2025-07-23 15:38:58] 2025-07-23 19:38:28,376 | INFO     | [payload] validate_pre thread has finished
[2025-07-23 15:38:58] 2025-07-23 19:38:28,604 | INFO     | [data] control thread has finished
[2025-07-23 15:38:58] 2025-07-23 19:38:28,617 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-23 15:38:58] 2025-07-23 19:38:28,695 | INFO     | [payload] control thread has finished
[2025-07-23 15:38:58] 2025-07-23 19:38:28,946 | INFO     | [job] queue monitor thread has finished
[2025-07-23 15:38:58] 2025-07-23 19:38:29,010 | INFO     | [job] validate thread has finished
[2025-07-23 15:38:58] 2025-07-23 19:38:29,095 | INFO     | [payload] execute_payloads thread has finished
[2025-07-23 15:38:58] 2025-07-23 19:38:29,235 | INFO     | [payload] failed_post thread has finished
[2025-07-23 15:38:58] 2025-07-23 19:38:29,247 | INFO     | [data] copytool_in thread has finished
[2025-07-23 15:38:58] 2025-07-23 19:38:29,273 | INFO     | [job] create_data_payload thread has finished
[2025-07-23 15:38:58] 2025-07-23 19:38:29,689 | INFO     | [data] copytool_out thread has finished
[2025-07-23 15:38:58] 2025-07-23 19:38:31,146 | INFO     | [data] queue_monitor thread has finished
[2025-07-23 15:38:58] 2025-07-23 19:38:32,649 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140069114615616)>', '<ExcThread(monitor, started 140068320691968)>']
[2025-07-23 15:38:58] 2025-07-23 19:38:37,676 | INFO     | all workflow threads have been joined
[2025-07-23 15:38:58] 2025-07-23 19:38:37,676 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-23 15:38:58] 2025-07-23 19:38:37,677 | INFO     | traces error code: 0
[2025-07-23 15:38:58] 2025-07-23 19:38:37,677 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-23 15:38:58] 2025-07-23 19:38:57,415 | INFO     | PID=1647664 has CPU usage=2.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-07-23 15:38:58] 2025-07-23 19:38:57,416 | INFO     | .. there are 15 such processes running
[2025-07-23 15:38:58] 2025-07-23 19:38:57,416 | INFO     | found 0 job(s) in 20 queues
[2025-07-23 15:38:58] 2025-07-23 19:38:57,416 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-23 15:38:58] 2025-07-23 19:38:57,417 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-23 15:38:58] 2025-07-23 19:38:57,417 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-23 15:38:58] 2025-07-23 19:38:57,417 | INFO     | [monitor] control thread has ended
[2025-07-23 15:38:58] 2025-07-23 19:38:57,532 [wrapper] ==== pilot stdout END ====
[2025-07-23 15:38:58] 2025-07-23 19:38:57,534 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-23 15:38:58] 2025-07-23 19:38:57,543 [wrapper] pilotpid: 1647664
[2025-07-23 15:38:58] 2025-07-23 19:38:57,552 [wrapper] Pilot exit status: 0
[2025-07-23 15:38:58] 2025-07-23 19:38:57,609 [wrapper] pandaids: 6741883995
[2025-07-23 15:38:58] 2025-07-23 19:38:57,688 [wrapper] cleanup supervisor_pilot 2289669 1647665
[2025-07-23 15:38:58] 2025-07-23 19:38:57,713 [wrapper] Test setup, not cleaning
[2025-07-23 15:38:58] 2025-07-23 19:38:57,760 [wrapper] apfmon messages muted
[2025-07-23 15:38:58] 2025-07-23 19:38:57,771 [wrapper] ==== wrapper stdout END ====
[2025-07-23 15:38:58] 2025-07-23 19:38:57,783 [wrapper] ==== wrapper stderr END ====
[2025-07-23 15:38:58]  *** Error codes and diagnostics ***
[2025-07-23 15:38:58]     "exeErrorCode": 0,
[2025-07-23 15:38:58]     "exeErrorDiag": "",
[2025-07-23 15:38:58]     "pilotErrorCode": 0,
[2025-07-23 15:38:58]     "pilotErrorDiag": "",
[2025-07-23 15:38:58]  *** Listing of results directory ***
[2025-07-23 15:38:58] total 607212
[2025-07-23 15:38:58] -rw-r--r--. 1 boincer umatlas    530466 Jul 23 03:44 pilot3.tar.gz
[2025-07-23 15:38:58] -rw-r--r--. 1 boincer umatlas      5112 Jul 23 04:10 queuedata.json
[2025-07-23 15:38:58] -rwx------. 1 boincer umatlas     36292 Jul 23 04:12 runpilot2-wrapper.sh
[2025-07-23 15:38:58] -rw-r--r--. 1 boincer umatlas       100 Jul 23 12:13 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-23 15:38:58] -rwxr-xr-x. 1 boincer umatlas      7986 Jul 23 12:13 run_atlas
[2025-07-23 15:38:58] -rw-r--r--. 1 boincer umatlas       105 Jul 23 12:13 job.xml
[2025-07-23 15:38:58] -rw-r--r--. 2 boincer umatlas 335445187 Jul 23 12:13 EVNT.45697470._000198.pool.root.1
[2025-07-23 15:38:58] -rw-r--r--. 2 boincer umatlas     15095 Jul 23 12:13 start_atlas.sh
[2025-07-23 15:38:58] drwxrwx--x. 2 boincer umatlas      4096 Jul 23 12:13 shared
[2025-07-23 15:38:58] -rw-r--r--. 2 boincer umatlas    542903 Jul 23 12:13 input.tar.gz
[2025-07-23 15:38:58] -rw-r--r--. 1 boincer umatlas         0 Jul 23 12:13 boinc_lockfile
[2025-07-23 15:38:58] -rw-r--r--. 1 boincer umatlas      2612 Jul 23 12:13 pandaJob.out
[2025-07-23 15:38:58] -rw-------. 1 boincer umatlas    978487 Jul 23 12:13 agis_schedconf.cvmfs.json
[2025-07-23 15:38:58] drwx------. 4 boincer umatlas      4096 Jul 23 12:13 pilot3
[2025-07-23 15:38:58] -rw-r--r--. 1 boincer umatlas      6898 Jul 23 15:27 init_data.xml
[2025-07-23 15:38:58] -rw-------. 1 boincer umatlas 279511363 Jul 23 15:37 HITS.45697472._004367.pool.root.1
[2025-07-23 15:38:58] -rw-r--r--. 1 boincer umatlas       530 Jul 23 15:37 boinc_task_state.xml
[2025-07-23 15:38:58] -rw-------. 1 boincer umatlas      1033 Jul 23 15:37 memory_monitor_summary.json
[2025-07-23 15:38:58] -rw-------. 1 boincer umatlas   1593041 Jul 23 15:38 agis_ddmendpoints.agis.ALL.json
[2025-07-23 15:38:58] -rw-------. 1 boincer umatlas    385247 Jul 23 15:38 log.45697472._004367.job.log.tgz.1
[2025-07-23 15:38:58] -rw-------. 1 boincer umatlas      7777 Jul 23 15:38 heartbeat.json
[2025-07-23 15:38:58] -rw-r--r--. 1 boincer umatlas      8192 Jul 23 15:38 boinc_mmap_file
[2025-07-23 15:38:58] -rw-r--r--. 1 boincer umatlas        28 Jul 23 15:38 wrapper_checkpoint.txt
[2025-07-23 15:38:58] -rw-------. 1 boincer umatlas       823 Jul 23 15:38 pilotlog.txt
[2025-07-23 15:38:58] -rw-------. 1 boincer umatlas        95 Jul 23 15:38 pilot_heartbeat.json
[2025-07-23 15:38:58] -rw-------. 1 boincer umatlas   1091944 Jul 23 15:38 log.45697472._004367.job.log.1
[2025-07-23 15:38:58] -rw-------. 1 boincer umatlas       357 Jul 23 15:38 output.list
[2025-07-23 15:38:58] -rw-r--r--. 1 boincer umatlas       620 Jul 23 15:38 runtime_log
[2025-07-23 15:38:58] -rw-------. 1 boincer umatlas   1495040 Jul 23 15:38 result.tar.gz
[2025-07-23 15:38:58] -rw-------. 1 boincer umatlas       655 Jul 23 15:38 tqYLDmPljy7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmFGLLDmXzs94m.diag
[2025-07-23 15:38:58] -rw-r--r--. 1 boincer umatlas      8661 Jul 23 15:38 runtime_log.err
[2025-07-23 15:38:58] -rw-r--r--. 1 boincer umatlas     21321 Jul 23 15:38 stderr.txt
[2025-07-23 15:38:58] HITS file was successfully produced:
[2025-07-23 15:38:58] -rw-------. 1 boincer umatlas 279511363 Jul 23 15:37 shared/HITS.pool.root.1
[2025-07-23 15:38:58]  *** Contents of shared directory: ***
[2025-07-23 15:38:58] total 602564
[2025-07-23 15:38:58] -rw-r--r--. 2 boincer umatlas 335445187 Jul 23 12:13 ATLAS.root_0
[2025-07-23 15:38:58] -rw-r--r--. 2 boincer umatlas     15095 Jul 23 12:13 start_atlas.sh
[2025-07-23 15:38:58] -rw-r--r--. 2 boincer umatlas    542903 Jul 23 12:13 input.tar.gz
[2025-07-23 15:38:58] -rw-------. 1 boincer umatlas 279511363 Jul 23 15:37 HITS.pool.root.1
[2025-07-23 15:38:58] -rw-------. 1 boincer umatlas   1495040 Jul 23 15:38 result.tar.gz
15:38:59 (1641650): run_atlas exited; CPU time 46448.780428
15:38:59 (1641650): called boinc_finish(0)

</stderr_txt>
]]>

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