Stderr output

<core_client_version>8.0.4</core_client_version>
<![CDATA[
<stderr_txt>
02:41:03 (868188): wrapper (7.7.26015): starting
02:41:03 (868188): wrapper: running run_atlas (--nthreads 4)
[2025-07-24 02:41:03] Arguments: --nthreads 4
[2025-07-24 02:41:03] Threads: 4
[2025-07-24 02:41:03] Checking for CVMFS
[2025-07-24 02:41:03] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-24 02:41:03] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-24 02:41:03] Running cvmfs_config stat atlas.cern.ch
[2025-07-24 02:41:04] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-24 02:41:04] 2.13.1.0 2417432 3315 50772 148676 1 188 3284048 4194304 2754 130560 0 7024153 99.996 121201 95 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
[2025-07-24 02:41:04] CVMFS is ok
[2025-07-24 02:41:04] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-07-24 02:41:04] Small home clusters do not require a local http proxy but it is suggested if
[2025-07-24 02:41:04] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2025-07-24 02:41:04] Further information can be found at the LHC@home message board.
[2025-07-24 02:41:04] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-24 02:41:04] Checking for apptainer binary...
[2025-07-24 02:41:04] apptainer is not installed, using version from CVMFS
[2025-07-24 02:41:04] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-24 02:41:04] Ryze
[2025-07-24 02:41:04] apptainer works
[2025-07-24 02:41:04] Set ATHENA_PROC_NUMBER=4
[2025-07-24 02:41:04] Set ATHENA_CORE_NUMBER=4
[2025-07-24 02:41:04] Starting ATLAS job with PandaID=6741883889
[2025-07-24 02:41:04] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc-client/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-24 05:22:41]  *** The last 200 lines of the pilot log: ***
[2025-07-24 05:22:41] 2025-07-24 03:22:06,730 | INFO     | PID=871910 has CPU usage=5.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-07-24 05:22:41] 2025-07-24 03:22:06,730 | INFO     | .. there are 4 such processes running
[2025-07-24 05:22:41] 2025-07-24 03:22:07,219 | INFO     | monitor loop #728: job 0:6741883889 is in state 'finished'
[2025-07-24 05:22:41] 2025-07-24 03:22:07,220 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-24 05:22:41] 2025-07-24 03:22:08,474 | INFO     | CPU arch script returned: x86-64-v3
[2025-07-24 05:22:41] 2025-07-24 03:22:08,477 | INFO     | found 12 cores (12 cores per socket, 1 socket) HT, CPU MHz: 3521.289333333334
[2025-07-24 05:22:41] 2025-07-24 03:22:08,480 | INFO     | using path: /var/lib/boinc-client/slots/0/PanDA_Pilot-6741883889/memory_monitor_summary.json (trf name=prmon)
[2025-07-24 05:22:41] 2025-07-24 03:22:08,481 | INFO     | extracted standard info from prmon json
[2025-07-24 05:22:41] 2025-07-24 03:22:08,481 | INFO     | extracted standard memory fields from prmon json
[2025-07-24 05:22:41] 2025-07-24 03:22:08,481 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-24 05:22:41] 2025-07-24 03:22:08,481 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-24 05:22:41] 2025-07-24 03:22:08,481 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-24 05:22:41] 2025-07-24 03:22:08,483 | INFO     | fitting pss+swap vs Time
[2025-07-24 05:22:41] 2025-07-24 03:22:08,483 | INFO     | sum of square deviations: 1223016419.5
[2025-07-24 05:22:41] 2025-07-24 03:22:08,484 | INFO     | sum of deviations: 11060061828.999994
[2025-07-24 05:22:41] 2025-07-24 03:22:08,484 | INFO     | mean x: 1753322484.5
[2025-07-24 05:22:41] 2025-07-24 03:22:08,484 | INFO     | mean y: 2354826.0632911394
[2025-07-24 05:22:41] 2025-07-24 03:22:08,484 | INFO     | -- intersect: -15853405387.420813
[2025-07-24 05:22:41] 2025-07-24 03:22:08,484 | INFO     | intersect: -15853405387.420813
[2025-07-24 05:22:41] 2025-07-24 03:22:08,484 | INFO     | chi2: 1.4513796429368608
[2025-07-24 05:22:41] 2025-07-24 03:22:08,485 | INFO     | sum of square deviations: 1110539892.0
[2025-07-24 05:22:41] 2025-07-24 03:22:08,485 | INFO     | sum of deviations: 10810024658.999996
[2025-07-24 05:22:41] 2025-07-24 03:22:08,485 | INFO     | mean x: 1753322332.0
[2025-07-24 05:22:41] 2025-07-24 03:22:08,485 | INFO     | mean y: 2354486.9411764704
[2025-07-24 05:22:41] 2025-07-24 03:22:08,486 | INFO     | -- intersect: -17064531431.0078
[2025-07-24 05:22:41] 2025-07-24 03:22:08,486 | INFO     | intersect: -17064531431.0078
[2025-07-24 05:22:41] 2025-07-24 03:22:08,486 | INFO     | chi2: 1.4528849693870316
[2025-07-24 05:22:41] 2025-07-24 03:22:08,486 | INFO     | current chi2=1.4528849693870316 (change=-0.10371693288495773 %)
[2025-07-24 05:22:41] 2025-07-24 03:22:08,486 | INFO     | right removable region: 152
[2025-07-24 05:22:41] 2025-07-24 03:22:08,486 | INFO     | sum of square deviations: 1110539892.0
[2025-07-24 05:22:41] 2025-07-24 03:22:08,487 | INFO     | sum of deviations: -9813163146.999998
[2025-07-24 05:22:41] 2025-07-24 03:22:08,487 | INFO     | mean x: 1753322637.0
[2025-07-24 05:22:41] 2025-07-24 03:22:08,487 | INFO     | mean y: 2382659.54248366
[2025-07-24 05:22:41] 2025-07-24 03:22:08,487 | INFO     | -- intersect: 15495424566.594711
[2025-07-24 05:22:41] 2025-07-24 03:22:08,487 | INFO     | intersect: 15495424566.594711
[2025-07-24 05:22:41] 2025-07-24 03:22:08,487 | INFO     | chi2: 0.03098418335276688
[2025-07-24 05:22:41] 2025-07-24 03:22:08,487 | INFO     | current chi2=0.03098418335276688 (change=97.8651909923395 %)
[2025-07-24 05:22:41] 2025-07-24 03:22:08,488 | INFO     | sum of square deviations: 1005179777.0
[2025-07-24 05:22:41] 2025-07-24 03:22:08,488 | INFO     | sum of deviations: -8810709246.499998
[2025-07-24 05:22:41] 2025-07-24 03:22:08,488 | INFO     | mean x: 1753322789.5
[2025-07-24 05:22:41] 2025-07-24 03:22:08,488 | INFO     | mean y: 2381195.9662162163
[2025-07-24 05:22:41] 2025-07-24 03:22:08,488 | INFO     | -- intersect: 15370793560.620087
[2025-07-24 05:22:41] 2025-07-24 03:22:08,488 | INFO     | intersect: 15370793560.620087
[2025-07-24 05:22:41] 2025-07-24 03:22:08,488 | INFO     | chi2: 0.030628664635961526
[2025-07-24 05:22:41] 2025-07-24 03:22:08,489 | INFO     | current chi2=0.030628664635961526 (change=1.1474200005778303 %)
[2025-07-24 05:22:41] 2025-07-24 03:22:08,489 | INFO     | left removable region: 20
[2025-07-24 05:22:41] 2025-07-24 03:22:08,489 | INFO     | sum of square deviations: 713140813.0
[2025-07-24 05:22:41] 2025-07-24 03:22:08,489 | INFO     | sum of deviations: -4690178919.0
[2025-07-24 05:22:41] 2025-07-24 03:22:08,489 | INFO     | mean x: 1753322911.5
[2025-07-24 05:22:41] 2025-07-24 03:22:08,489 | INFO     | mean y: 2375339.742424242
[2025-07-24 05:22:41] 2025-07-24 03:22:08,489 | INFO     | -- intersect: 11533615745.29891
[2025-07-24 05:22:41] 2025-07-24 03:22:08,490 | INFO     | intersect: 11533615745.29891
[2025-07-24 05:22:41] 2025-07-24 03:22:08,490 | INFO     | chi2: 0.024768173120568216
[2025-07-24 05:22:41] 2025-07-24 03:22:08,490 | INFO     | -- intersect: 11533615745.29891
[2025-07-24 05:22:41] 2025-07-24 03:22:08,490 | INFO     | current memory leak: -6.58 B/s (using 132 data points, chi2=0.02)
[2025-07-24 05:22:41] 2025-07-24 03:22:08,490 | INFO     | could have reported an average CPU frequency of 3612 MHz (9 samples)
[2025-07-24 05:22:41] 2025-07-24 03:22:08,490 | INFO     | ..............................
[2025-07-24 05:22:41] 2025-07-24 03:22:08,490 | INFO     | . Timing measurements:
[2025-07-24 05:22:41] 2025-07-24 03:22:08,490 | INFO     | . get job = 0 s
[2025-07-24 05:22:41] 2025-07-24 03:22:08,490 | INFO     | . initial setup = 1 s
[2025-07-24 05:22:41] 2025-07-24 03:22:08,490 | INFO     | . payload setup = 5 s
[2025-07-24 05:22:41] 2025-07-24 03:22:08,491 | INFO     | . stage-in = 0 s
[2025-07-24 05:22:41] 2025-07-24 03:22:08,491 | INFO     | . payload execution = 9623 s
[2025-07-24 05:22:41] 2025-07-24 03:22:08,491 | INFO     | . stage-out = 0 s
[2025-07-24 05:22:41] 2025-07-24 03:22:08,491 | INFO     | . log creation = 0 s
[2025-07-24 05:22:41] 2025-07-24 03:22:08,491 | INFO     | ..............................
[2025-07-24 05:22:41] 2025-07-24 03:22:08,946 | INFO     | 
[2025-07-24 05:22:41] 2025-07-24 03:22:08,947 | INFO     | job summary report
[2025-07-24 05:22:41] 2025-07-24 03:22:08,947 | INFO     | --------------------------------------------------
[2025-07-24 05:22:41] 2025-07-24 03:22:08,947 | INFO     | PanDA job id: 6741883889
[2025-07-24 05:22:41] 2025-07-24 03:22:08,947 | INFO     | task id: 45697472
[2025-07-24 05:22:41] 2025-07-24 03:22:08,947 | INFO     | errors: (none)
[2025-07-24 05:22:41] 2025-07-24 03:22:08,947 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-24 05:22:41] 2025-07-24 03:22:08,947 | INFO     | pilot state: finished 
[2025-07-24 05:22:41] 2025-07-24 03:22:08,947 | INFO     | transexitcode: 0
[2025-07-24 05:22:41] 2025-07-24 03:22:08,947 | INFO     | exeerrorcode: 0
[2025-07-24 05:22:41] 2025-07-24 03:22:08,947 | INFO     | exeerrordiag: 
[2025-07-24 05:22:41] 2025-07-24 03:22:08,947 | INFO     | exitcode: 0
[2025-07-24 05:22:41] 2025-07-24 03:22:08,947 | INFO     | exitmsg: OK
[2025-07-24 05:22:41] 2025-07-24 03:22:08,947 | INFO     | cpuconsumptiontime: 37598 s
[2025-07-24 05:22:41] 2025-07-24 03:22:08,947 | INFO     | nevents: 400
[2025-07-24 05:22:41] 2025-07-24 03:22:08,947 | INFO     | neventsw: 0
[2025-07-24 05:22:41] 2025-07-24 03:22:08,948 | INFO     | pid: 878555
[2025-07-24 05:22:41] 2025-07-24 03:22:08,948 | INFO     | pgrp: 878555
[2025-07-24 05:22:41] 2025-07-24 03:22:08,948 | INFO     | corecount: 4
[2025-07-24 05:22:41] 2025-07-24 03:22:08,948 | INFO     | event service: False
[2025-07-24 05:22:41] 2025-07-24 03:22:08,948 | INFO     | sizes: {0: 2397490, 3: 2397752, 11: 2397780, 9632: 2426433, 9633: 2435445, 9634: 2435501, 9641: 2435887}
[2025-07-24 05:22:41] 2025-07-24 03:22:08,948 | INFO     | --------------------------------------------------
[2025-07-24 05:22:41] 2025-07-24 03:22:08,948 | INFO     | 
[2025-07-24 05:22:41] 2025-07-24 03:22:08,948 | INFO     | executing command: ls -lF /var/lib/boinc-client/slots/0
[2025-07-24 05:22:41] 2025-07-24 03:22:08,989 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-24 05:22:41] 2025-07-24 03:22:08,990 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-24 05:22:41] 2025-07-24 03:22:08,990 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-24 05:22:41] 2025-07-24 03:22:08,990 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-24 05:22:41] 2025-07-24 03:22:08,990 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-24 05:22:41] 2025-07-24 03:22:08,990 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-24 05:22:41] 2025-07-24 03:22:08,990 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-24 05:22:41] 2025-07-24 03:22:08,990 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-24 05:22:41] 2025-07-24 03:22:08,990 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-24 05:22:41] 2025-07-24 03:22:08,990 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-24 05:22:41] 2025-07-24 03:22:08,990 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-24 05:22:41] 2025-07-24 03:22:08,990 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-24 05:22:41] 2025-07-24 03:22:08,990 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-24 05:22:41] 2025-07-24 03:22:08,990 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-24 05:22:41] 2025-07-24 03:22:08,990 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-24 05:22:41] 2025-07-24 03:22:08,990 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-24 05:22:41] 2025-07-24 03:22:08,991 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-24 05:22:41] 2025-07-24 03:22:08,991 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-24 05:22:41] 2025-07-24 03:22:08,991 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-24 05:22:41] 2025-07-24 03:22:08,991 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-24 05:22:41] 2025-07-24 03:22:08,991 | INFO     | job 6741883889 has completed (purged errors)
[2025-07-24 05:22:41] 2025-07-24 03:22:08,991 | INFO     | overall cleanup function is called
[2025-07-24 05:22:41] 2025-07-24 03:22:09,998 | INFO     | --- collectZombieJob: --- 10, [878555]
[2025-07-24 05:22:41] 2025-07-24 03:22:09,998 | INFO     | zombie collector waiting for pid 878555
[2025-07-24 05:22:41] 2025-07-24 03:22:09,999 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-24 05:22:41] 2025-07-24 03:22:09,999 | INFO     | collected zombie processes
[2025-07-24 05:22:41] 2025-07-24 03:22:09,999 | INFO     | will attempt to kill all subprocesses of pid=878555
[2025-07-24 05:22:41] 2025-07-24 03:22:10,125 | INFO     | process IDs to be killed: [878555] (in reverse order)
[2025-07-24 05:22:41] 2025-07-24 03:22:10,188 | WARNING  | found no corresponding commands to process id(s)
[2025-07-24 05:22:41] 2025-07-24 03:22:10,188 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-24 05:22:41] 2025-07-24 03:22:10,192 | INFO     | did not find any defunct processes belonging to 878555
[2025-07-24 05:22:41] 2025-07-24 03:22:10,195 | INFO     | did not find any defunct processes belonging to 878555
[2025-07-24 05:22:41] 2025-07-24 03:22:10,195 | INFO     | ready for new job
[2025-07-24 05:22:41] 2025-07-24 03:22:10,195 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-24 05:22:41] 2025-07-24 03:22:10,197 | INFO     | ***************************************
[2025-07-24 05:22:41] 2025-07-24 03:22:10,197 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-24 05:22:41] 2025-07-24 03:22:10,197 | INFO     | ***************************************
[2025-07-24 05:22:41] 2025-07-24 03:22:10,197 | INFO     | 
[2025-07-24 05:22:41] 2025-07-24 03:22:10,198 | INFO     | architecture information:
[2025-07-24 05:22:41] 2025-07-24 03:22:10,198 | INFO     | executing command: cat /etc/os-release
[2025-07-24 05:22:41] 2025-07-24 03:22:10,215 | INFO     | cat /etc/os-release:
[2025-07-24 05:22:41] NAME="CentOS Linux"
[2025-07-24 05:22:41] VERSION="7 (Core)"
[2025-07-24 05:22:41] ID="centos"
[2025-07-24 05:22:41] ID_LIKE="rhel fedora"
[2025-07-24 05:22:41] VERSION_ID="7"
[2025-07-24 05:22:41] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-24 05:22:41] ANSI_COLOR="0;31"
[2025-07-24 05:22:41] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-24 05:22:41] HOME_URL="https://www.centos.org/"
[2025-07-24 05:22:41] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-24 05:22:41] 
[2025-07-24 05:22:41] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-24 05:22:41] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-24 05:22:41] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-24 05:22:41] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-24 05:22:41] 
[2025-07-24 05:22:41] 2025-07-24 03:22:10,216 | INFO     | ***************************************
[2025-07-24 05:22:41] 2025-07-24 03:22:10,718 | INFO     | executing command: df -mP /var/lib/boinc-client/slots/0
[2025-07-24 05:22:41] 2025-07-24 03:22:10,740 | INFO     | sufficient remaining disk space (3207080181760 B)
[2025-07-24 05:22:41] 2025-07-24 03:22:10,740 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-24 05:22:41] 2025-07-24 03:22:10,740 | INFO     | current server update state: UPDATING_FINAL
[2025-07-24 05:22:41] 2025-07-24 03:22:10,741 | INFO     | update_server=False
[2025-07-24 05:22:41] 2025-07-24 03:22:10,741 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-24 05:22:41] 2025-07-24 03:22:10,741 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-24 05:22:41] 2025-07-24 03:22:10,741 | INFO     | aborting loop
[2025-07-24 05:22:41] 2025-07-24 03:22:11,099 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-24 05:22:41] 2025-07-24 03:22:11,269 | INFO     | all data control threads have been joined
[2025-07-24 05:22:41] 2025-07-24 03:22:11,718 | INFO     | all job control threads have been joined
[2025-07-24 05:22:41] 2025-07-24 03:22:11,745 | INFO     | [job] job monitor thread has finished
[2025-07-24 05:22:41] 2025-07-24 03:22:11,746 | INFO     | [job] retrieve thread has finished
[2025-07-24 05:22:41] 2025-07-24 03:22:11,758 | INFO     | [payload] validate_pre thread has finished
[2025-07-24 05:22:41] 2025-07-24 03:22:11,906 | INFO     | [payload] failed_post thread has finished
[2025-07-24 05:22:41] 2025-07-24 03:22:11,983 | INFO     | [data] copytool_in thread has finished
[2025-07-24 05:22:41] 2025-07-24 03:22:12,140 | INFO     | all payload control threads have been joined
[2025-07-24 05:22:41] 2025-07-24 03:22:12,149 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-24 05:22:41] 2025-07-24 03:22:12,274 | INFO     | [data] control thread has finished
[2025-07-24 05:22:41] 2025-07-24 03:22:12,302 | INFO     | [payload] execute_payloads thread has finished
[2025-07-24 05:22:41] 2025-07-24 03:22:12,724 | INFO     | [job] control thread has finished
[2025-07-24 05:22:41] 2025-07-24 03:22:12,912 | INFO     | [job] validate thread has finished
[2025-07-24 05:22:41] 2025-07-24 03:22:13,006 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-24 05:22:41] 2025-07-24 03:22:13,051 | INFO     | [job] create_data_payload thread has finished
[2025-07-24 05:22:41] 2025-07-24 03:22:13,104 | INFO     | [data] copytool_out thread has finished
[2025-07-24 05:22:41] 2025-07-24 03:22:13,145 | INFO     | [payload] control thread has finished
[2025-07-24 05:22:41] 2025-07-24 03:22:13,174 | INFO     | [payload] validate_post thread has finished
[2025-07-24 05:22:41] 2025-07-24 03:22:13,570 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-24 05:22:41] 2025-07-24 03:22:14,575 | INFO     | [job] queue monitor thread has finished
[2025-07-24 05:22:41] 2025-07-24 03:22:16,155 | INFO     | [data] queue_monitor thread has finished
[2025-07-24 05:22:41] 2025-07-24 03:22:16,529 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 137756313626432)>', '<ExcThread(monitor, started 137755497588480)>']
[2025-07-24 05:22:41] 2025-07-24 03:22:21,553 | INFO     | all workflow threads have been joined
[2025-07-24 05:22:41] 2025-07-24 03:22:21,554 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-24 05:22:41] 2025-07-24 03:22:21,554 | INFO     | traces error code: 0
[2025-07-24 05:22:41] 2025-07-24 03:22:21,554 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-24 05:22:41] 2025-07-24 03:22:40,954 | INFO     | PID=871910 has CPU usage=1.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-07-24 05:22:41] 2025-07-24 03:22:40,954 | INFO     | .. there are 4 such processes running
[2025-07-24 05:22:41] 2025-07-24 03:22:40,954 | INFO     | found 0 job(s) in 20 queues
[2025-07-24 05:22:41] 2025-07-24 03:22:40,954 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-24 05:22:41] 2025-07-24 03:22:40,954 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-24 05:22:41] 2025-07-24 03:22:40,954 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-24 05:22:41] 2025-07-24 03:22:40,955 | INFO     | [monitor] control thread has ended
[2025-07-24 05:22:41] 2025-07-24 03:22:41,067 [wrapper] ==== pilot stdout END ====
[2025-07-24 05:22:41] 2025-07-24 03:22:41,071 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-24 05:22:41] 2025-07-24 03:22:41,075 [wrapper] pilotpid: 871910
[2025-07-24 05:22:41] 2025-07-24 03:22:41,078 [wrapper] Pilot exit status: 0
[2025-07-24 05:22:41] 2025-07-24 03:22:41,093 [wrapper] pandaids: 6741883889
[2025-07-24 05:22:41] 2025-07-24 03:22:41,127 [wrapper] cleanup supervisor_pilot  955559 871911
[2025-07-24 05:22:41] 2025-07-24 03:22:41,129 [wrapper] Test setup, not cleaning
[2025-07-24 05:22:41] 2025-07-24 03:22:41,133 [wrapper] apfmon messages muted
[2025-07-24 05:22:41] 2025-07-24 03:22:41,135 [wrapper] ==== wrapper stdout END ====
[2025-07-24 05:22:41] 2025-07-24 03:22:41,136 [wrapper] ==== wrapper stderr END ====
[2025-07-24 05:22:41]  *** Error codes and diagnostics ***
[2025-07-24 05:22:41]     "exeErrorCode": 0,
[2025-07-24 05:22:41]     "exeErrorDiag": "",
[2025-07-24 05:22:41]     "pilotErrorCode": 0,
[2025-07-24 05:22:41]     "pilotErrorDiag": "",
[2025-07-24 05:22:41]  *** Listing of results directory ***
[2025-07-24 05:22:41] insgesamt 600692
[2025-07-24 05:22:41] -rw-r--r-- 1 boinc boinc    530466 Jul 23 09:44 pilot3.tar.gz
[2025-07-24 05:22:41] -rwx------ 1 boinc boinc     36292 Jul 23 10:07 runpilot2-wrapper.sh
[2025-07-24 05:22:41] -rw-r--r-- 1 boinc boinc      5112 Jul 23 10:07 queuedata.json
[2025-07-24 05:22:41] -rw-r--r-- 1 boinc boinc       100 Jul 24 02:41 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-24 05:22:41] -rwxr-xr-x 1 boinc boinc      7986 Jul 24 02:41 run_atlas
[2025-07-24 05:22:41] -rw-r--r-- 1 boinc boinc       105 Jul 24 02:41 job.xml
[2025-07-24 05:22:41] -rw-r--r-- 2 boinc boinc 330447572 Jul 24 02:41 EVNT.45697470._000194.pool.root.1
[2025-07-24 05:22:41] -rw-r--r-- 2 boinc boinc     15095 Jul 24 02:41 start_atlas.sh
[2025-07-24 05:22:41] drwxrwx--x 2 boinc boinc      4096 Jul 24 02:41 shared
[2025-07-24 05:22:41] -rw-r--r-- 2 boinc boinc    542895 Jul 24 02:41 input.tar.gz
[2025-07-24 05:22:41] -rw-r--r-- 1 boinc boinc      9254 Jul 24 02:41 init_data.xml
[2025-07-24 05:22:41] -rw-r--r-- 1 boinc boinc         0 Jul 24 02:41 boinc_lockfile
[2025-07-24 05:22:41] -rw-r--r-- 1 boinc boinc      2611 Jul 24 02:41 pandaJob.out
[2025-07-24 05:22:41] -rw------- 1 boinc boinc    979632 Jul 24 02:41 agis_schedconf.cvmfs.json
[2025-07-24 05:22:41] -rw------- 1 boinc boinc   1593041 Jul 24 02:41 agis_ddmendpoints.agis.ALL.json
[2025-07-24 05:22:41] drwx------ 4 boinc boinc      4096 Jul 24 02:41 pilot3
[2025-07-24 05:22:41] -rw------- 1 boinc boinc 278333843 Jul 24 05:21 HITS.45697472._004261.pool.root.1
[2025-07-24 05:22:41] -rw-r--r-- 1 boinc boinc       529 Jul 24 05:21 boinc_task_state.xml
[2025-07-24 05:22:41] -rw------- 1 boinc boinc        95 Jul 24 05:21 pilot_heartbeat.json
[2025-07-24 05:22:41] -rw------- 1 boinc boinc      1020 Jul 24 05:21 memory_monitor_summary.json
[2025-07-24 05:22:41] -rw------- 1 boinc boinc    292393 Jul 24 05:22 log.45697472._004261.job.log.tgz.1
[2025-07-24 05:22:41] -rw------- 1 boinc boinc      7735 Jul 24 05:22 heartbeat.json
[2025-07-24 05:22:41] -rw-r--r-- 1 boinc boinc      8192 Jul 24 05:22 boinc_mmap_file
[2025-07-24 05:22:41] -rw-r--r-- 1 boinc boinc        27 Jul 24 05:22 wrapper_checkpoint.txt
[2025-07-24 05:22:41] -rw------- 1 boinc boinc       821 Jul 24 05:22 pilotlog.txt
[2025-07-24 05:22:41] -rw------- 1 boinc boinc    931146 Jul 24 05:22 log.45697472._004261.job.log.1
[2025-07-24 05:22:41] -rw------- 1 boinc boinc       357 Jul 24 05:22 output.list
[2025-07-24 05:22:41] -rw-r--r-- 1 boinc boinc       620 Jul 24 05:22 runtime_log
[2025-07-24 05:22:41] -rw------- 1 boinc boinc   1239040 Jul 24 05:22 result.tar.gz
[2025-07-24 05:22:41] -rw------- 1 boinc boinc       637 Jul 24 05:22 SjFNDmfgjy7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmtDLLDm1NZMMn.diag
[2025-07-24 05:22:41] -rw-r--r-- 1 boinc boinc      8688 Jul 24 05:22 runtime_log.err
[2025-07-24 05:22:41] -rw-r--r-- 1 boinc boinc     21319 Jul 24 05:22 stderr.txt
[2025-07-24 05:22:41] HITS file was successfully produced:
[2025-07-24 05:22:41] -rw------- 1 boinc boinc 278333843 Jul 24 05:21 shared/HITS.pool.root.1
[2025-07-24 05:22:41]  *** Contents of shared directory: ***
[2025-07-24 05:22:41] insgesamt 596284
[2025-07-24 05:22:41] -rw-r--r-- 2 boinc boinc 330447572 Jul 24 02:41 ATLAS.root_0
[2025-07-24 05:22:41] -rw-r--r-- 2 boinc boinc     15095 Jul 24 02:41 start_atlas.sh
[2025-07-24 05:22:41] -rw-r--r-- 2 boinc boinc    542895 Jul 24 02:41 input.tar.gz
[2025-07-24 05:22:41] -rw------- 1 boinc boinc 278333843 Jul 24 05:21 HITS.pool.root.1
[2025-07-24 05:22:41] -rw------- 1 boinc boinc   1239040 Jul 24 05:22 result.tar.gz
05:22:42 (868188): run_atlas exited; CPU time 37689.128668
05:22:42 (868188): called boinc_finish(0)

</stderr_txt>
]]>

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