Stderr output

<core_client_version>8.2.4</core_client_version>
<![CDATA[
<stderr_txt>
2025-07-23 15:55:15 (3104291): Detected: vboxwrapper 26206
2025-07-23 15:55:15 (3104291): Detected: BOINC client v8.2.4
2025-07-23 15:55:15 (3104291): Detected: VirtualBox VboxManage Interface (Version: 7.1.6)
2025-07-23 15:55:15 (3104291): Successfully copied 'init_data.xml' to the shared directory.
2025-07-23 15:55:16 (3104291): Create VM. (boinc_69e90fc33ce4ab29, slot#6)
2025-07-23 15:55:16 (3104291): Setting Memory Size for VM. (4800MB)
2025-07-23 15:55:16 (3104291): Setting CPU Count for VM. (8)
2025-07-23 15:55:16 (3104291): Setting Chipset Options for VM.
2025-07-23 15:55:16 (3104291): Setting Graphics Controller Options for VM.
2025-07-23 15:55:16 (3104291): Setting Boot Options for VM.
2025-07-23 15:55:16 (3104291): Setting Network Configuration for NAT.
2025-07-23 15:55:16 (3104291): Enabling VM Network Access.
2025-07-23 15:55:16 (3104291): Disabling USB Support for VM.
2025-07-23 15:55:16 (3104291): Disabling COM Port Support for VM.
2025-07-23 15:55:16 (3104291): Disabling LPT Port Support for VM.
2025-07-23 15:55:16 (3104291): Disabling Audio Support for VM.
2025-07-23 15:55:16 (3104291): Disabling Clipboard Support for VM.
2025-07-23 15:55:16 (3104291): Disabling Drag and Drop Support for VM.
2025-07-23 15:55:16 (3104291): Adding storage controller(s) to VM.
2025-07-23 15:55:16 (3104291): Adding virtual disk drive to VM. (ATLAS_vbox_3.01_image.vdi)
2025-07-23 15:55:18 (3104291): Adding VirtualBox Guest Additions to VM.
2025-07-23 15:55:18 (3104291): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2025-07-23 15:55:18 (3104291): forwarding host port 37125 to guest port 80
2025-07-23 15:55:18 (3104291): Enabling remote desktop for VM.
2025-07-23 15:55:18 (3104291): Required extension pack not installed, remote desktop not enabled.
2025-07-23 15:55:18 (3104291): Enabling shared directory for VM.
2025-07-23 15:55:18 (3104291): Starting VM using VBoxManage interface. (boinc_69e90fc33ce4ab29, slot#6)
2025-07-23 15:55:19 (3104291): Successfully started VM. (PID = '3104865')
2025-07-23 15:55:19 (3104291): Reporting VM Process ID to BOINC.
2025-07-23 15:55:19 (3104291): Guest Log: BIOS: VirtualBox 7.1.6
2025-07-23 15:55:19 (3104291): Guest Log: CPUID EDX: 0x178bfbff
2025-07-23 15:55:19 (3104291): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2025-07-23 15:55:19 (3104291): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2025-07-23 15:55:19 (3104291): VM state change detected. (old = 'poweredoff', new = 'running')
2025-07-23 15:55:19 (3104291): Detected: Web Application Enabled (http://localhost:37125)
2025-07-23 15:55:19 (3104291): Preference change detected
2025-07-23 15:55:19 (3104291): Setting CPU throttle for VM. (50%)
2025-07-23 15:55:19 (3104291): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 60 seconds) or (Vbox_job.xml: 900 seconds))
2025-07-23 15:55:21 (3104291): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2025-07-23 15:55:21 (3104291): Guest Log: BIOS: Booting from Hard Disk...
2025-07-23 15:55:25 (3104291): Guest Log: BIOS: KBD: unsupported int 16h function 03
2025-07-23 15:55:25 (3104291): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2025-07-23 15:55:25 (3104291): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2025-07-23 15:55:25 (3104291): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2025-07-23 15:55:25 (3104291): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2025-07-23 15:55:25 (3104291): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2025-07-23 15:55:25 (3104291): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2025-07-23 15:55:25 (3104291): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2025-07-23 15:55:25 (3104291): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2025-07-23 15:55:25 (3104291): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2025-07-23 15:55:25 (3104291): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2025-07-23 15:55:25 (3104291): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2025-07-23 15:55:25 (3104291): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2025-07-23 15:55:25 (3104291): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2025-07-23 15:55:25 (3104291): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2025-07-23 15:55:25 (3104291): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2025-07-23 15:55:25 (3104291): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2025-07-23 15:55:25 (3104291): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2025-07-23 15:55:25 (3104291): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2025-07-23 15:55:25 (3104291): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2025-07-23 15:55:25 (3104291): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2025-07-23 15:55:25 (3104291): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2025-07-23 15:55:25 (3104291): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2025-07-23 15:55:25 (3104291): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2025-07-23 15:55:25 (3104291): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2025-07-23 15:55:25 (3104291): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2025-07-23 15:55:25 (3104291): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2025-07-23 15:55:25 (3104291): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2025-07-23 15:55:25 (3104291): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2025-07-23 15:55:25 (3104291): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2025-07-23 15:55:25 (3104291): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2025-07-23 15:55:25 (3104291): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2025-07-23 15:56:34 (3104291): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2025-07-23 15:56:34 (3104291): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2025-07-23 15:56:40 (3104291): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2025-07-23 15:56:40 (3104291): Guest Log: 00:00:00.000109 main     Log opened 2025-07-23T19:56:38.673534000Z
2025-07-23 15:56:40 (3104291): Guest Log: 00:00:00.000173 main     OS Product: Linux
2025-07-23 15:56:40 (3104291): Guest Log: 00:00:00.000192 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2025-07-23 15:56:40 (3104291): Guest Log: 00:00:00.000203 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2025-07-23 15:56:40 (3104291): Guest Log: 00:00:00.000214 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2025-07-23 15:56:40 (3104291): Guest Log: 00:00:00.000214 main     Process ID: 1370
2025-07-23 15:56:40 (3104291): Guest Log: 00:00:00.000215 main     Package type: LINUX_64BITS_GENERIC
2025-07-23 15:56:40 (3104291): Guest Log: 00:00:00.000685 main     5.2.32 r132073 started. Verbose level = 0
2025-07-23 15:56:40 (3104291): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2025-07-23 15:56:40 (3104291): Guest Log: [INFO] Mounting shared directory
2025-07-23 15:56:42 (3104291): Guest Log: [INFO] Checking for init_data.xml
2025-07-23 15:56:44 (3104291): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2025-07-23 15:56:44 (3104291): Guest Log: [INFO] Detected branch: prod
2025-07-23 15:56:44 (3104291): Guest Log: This is the prod version of the ATLAS job wrapper
2025-07-23 15:56:44 (3104291): Guest Log: Copying input files
2025-07-23 15:56:46 (3104291): Guest Log: Copied input files into RunAtlas.
2025-07-23 15:56:46 (3104291): Guest Log: This VM did not configure a local http proxy via BOINC.
2025-07-23 15:56:46 (3104291): Guest Log: Small home clusters do not require a local http proxy but it is suggested if
2025-07-23 15:56:46 (3104291): Guest Log: more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
2025-07-23 15:56:46 (3104291): Guest Log: Further information can be found at the LHC@home message board.
2025-07-23 15:56:58 (3104291): Guest Log: Running cvmfs_config stat atlas.cern.ch
2025-07-23 15:56:58 (3104291): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2025-07-23 15:56:58 (3104291): Guest Log: 2.6.3.0 1648 0 30160 148669 4 1 3117619 4096000 0 65024 0 0 n/a 0 0 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
2025-07-23 15:56:58 (3104291): Guest Log: copied the webapp to /var/www
2025-07-23 15:56:58 (3104291): Guest Log: ATHENA_PROC_NUMBER=8
2025-07-23 15:56:58 (3104291): Guest Log: ATHENA_CORE_NUMBER=8
2025-07-23 15:56:58 (3104291): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2025-07-23 15:56:58 (3104291): Guest Log:  *** Starting ATLAS job. (PandaID=6741872277 taskID=45697490) ***
2025-07-23 17:34:20 (3104291): Status Report: Elapsed Time: '6000.000000'
2025-07-23 17:34:20 (3104291): Status Report: CPU Time: '20914.460000'
2025-07-23 17:55:24 (3104291): VM state change detected. (old = 'running', new = 'paused')
2025-07-23 20:15:55 (3104291): Preference change detected
2025-07-23 20:15:55 (3104291): Setting CPU throttle for VM. (50%)
2025-07-23 20:15:55 (3104291): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 60 seconds) or (Vbox_job.xml: 900 seconds))
2025-07-23 20:15:56 (3104291): VM state change detected. (old = 'paused', new = 'running')
2025-07-23 20:15:57 (3104291): VM state change detected. (old = 'running', new = 'paused')
2025-07-23 20:16:18 (3104291): Guest Log: 01:58:41.327694 timesync vgsvcTimeSyncWorker: Radical host time change: 8 460 029 000 000ns (HostNow=1 753 316 129 162 000 000 ns HostLast=1 753 307 669 133 000 000 ns)
2025-07-23 20:16:18 (3104291): VM state change detected. (old = 'paused', new = 'running')
2025-07-23 20:16:28 (3104291): Guest Log: 01:58:51.342123 timesync vgsvcTimeSyncWorker: Radical guest time change: 8 419 219 202 000ns (GuestNow=1 753 316 139 198 354 000 ns GuestLast=1 753 307 719 979 152 000 ns fSetTimeLastLoop=true )
2025-07-23 20:56:25 (3104291): Guest Log:  *** Job finished ***
2025-07-23 20:56:25 (3104291): Guest Log:  *** The last 20 lines of the pilot log: ***
2025-07-23 20:56:25 (3104291): Guest Log: 2025-07-24 00:55:23,978 | INFO     | all workflow threads have been joined
2025-07-23 20:56:25 (3104291): Guest Log: 2025-07-24 00:55:23,979 | INFO     | end of generic workflow (traces error code: 0)
2025-07-23 20:56:25 (3104291): Guest Log: 2025-07-24 00:55:23,979 | INFO     | traces error code: 0
2025-07-23 20:56:25 (3104291): Guest Log: 2025-07-24 00:55:23,979 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2025-07-23 20:56:25 (3104291): Guest Log: 2025-07-24 00:55:36,744 | INFO     | PID=6008 has CPU usage=1.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -j managed --pilot-user ATLAS --harvester-submit-mode PUSH -w generic --job-type managed --resource-type MCORE -z -t
2025-07-23 20:56:25 (3104291): Guest Log: 2025-07-24 00:55:36,744 | INFO     | found 0 job(s) in 20 queues
2025-07-23 20:56:25 (3104291): Guest Log: 2025-07-24 00:55:36,744 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
2025-07-23 20:56:25 (3104291): Guest Log: 2025-07-24 00:55:36,744 | WARNING  | will wait for a maximum of 300 s for threads to finish
2025-07-23 20:56:25 (3104291): Guest Log: 2025-07-24 00:55:36,744 | WARNING  | job_aborted has been set - aborting pilot monitoring
2025-07-23 20:56:25 (3104291): Guest Log: 2025-07-24 00:55:36,744 | INFO     | [monitor] control thread has ended
2025-07-23 20:56:25 (3104291): Guest Log: 2025-07-24 00:55:36,797 [wrapper] ==== pilot stdout END ====
2025-07-23 20:56:25 (3104291): Guest Log: 2025-07-24 00:55:36,801 [wrapper] ==== wrapper stdout RESUME ====
2025-07-23 20:56:25 (3104291): Guest Log: 2025-07-24 00:55:36,804 [wrapper] pilotpid: 6008
2025-07-23 20:56:25 (3104291): Guest Log: 2025-07-24 00:55:36,808 [wrapper] Pilot exit status: 0
2025-07-23 20:56:25 (3104291): Guest Log: 2025-07-24 00:55:36,896 [wrapper] pandaids: 6741872277
2025-07-23 20:56:25 (3104291): Guest Log: 2025-07-24 00:55:36,917 [wrapper] cleanup supervisor_pilot  5767 6009
2025-07-23 20:56:25 (3104291): Guest Log: 2025-07-24 00:55:36,920 [wrapper] Test setup, not cleaning
2025-07-23 20:56:25 (3104291): Guest Log: 2025-07-24 00:55:36,924 [wrapper] apfmon messages muted
2025-07-23 20:56:25 (3104291): Guest Log: 2025-07-24 00:55:36,927 [wrapper] ==== wrapper stdout END ====
2025-07-23 20:56:25 (3104291): Guest Log: 2025-07-24 00:55:36,931 [wrapper] ==== wrapper stderr END ====
2025-07-23 20:56:25 (3104291): Guest Log:  *** Error codes and diagnostics ***
2025-07-23 20:56:25 (3104291): Guest Log:     "exeErrorCode": 0,
2025-07-23 20:56:25 (3104291): Guest Log:     "exeErrorDiag": "",
2025-07-23 20:56:25 (3104291): Guest Log:     "pilotErrorCode": 0,
2025-07-23 20:56:25 (3104291): Guest Log:     "pilotErrorDiag": "",
2025-07-23 20:56:25 (3104291): Guest Log:  *** Listing of results directory ***
2025-07-23 20:56:25 (3104291): Guest Log: total 306596
2025-07-23 20:56:25 (3104291): Guest Log: -rw-r--r--. 1 atlas atlas    530466 Jul 23 02:25 pilot3.tar.gz
2025-07-23 20:56:25 (3104291): Guest Log: -rw-r--r--. 1 atlas atlas      5112 Jul 23 02:30 queuedata.json
2025-07-23 20:56:25 (3104291): Guest Log: -rwx------. 1 atlas atlas     36292 Jul 23 02:31 runpilot2-wrapper.sh
2025-07-23 20:56:25 (3104291): Guest Log: -rw-r--r--. 1 atlas atlas     15095 Jul 23 19:56 start_atlas.sh
2025-07-23 20:56:25 (3104291): Guest Log: -rw-r--r--. 1 atlas atlas    542897 Jul 23 19:56 input.tar.gz
2025-07-23 20:56:25 (3104291): Guest Log: -rw-r--r--. 1 atlas atlas      8922 Jul 23 19:56 init_data.xml
2025-07-23 20:56:25 (3104291): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 Jul 23 19:56 EVNT.45697488._000204.pool.root.1 -> /data/./ATLAS.root_0
2025-07-23 20:56:25 (3104291): Guest Log: -rw-r--r--. 1 atlas atlas      2590 Jul 23 19:56 pandaJob.out
2025-07-23 20:56:25 (3104291): Guest Log: -rw-------. 1 atlas atlas    979640 Jul 23 19:57 agis_schedconf.cvmfs.json
2025-07-23 20:56:25 (3104291): Guest Log: drwx------. 4 atlas atlas      4096 Jul 23 19:57 pilot3
2025-07-23 20:56:25 (3104291): Guest Log: -rw-------. 1 atlas atlas 308153618 Jul 24 00:54 HITS.45697490._004182.pool.root.1
2025-07-23 20:56:25 (3104291): Guest Log: -rw-------. 1 atlas atlas      1030 Jul 24 00:54 memory_monitor_summary.json
2025-07-23 20:56:25 (3104291): Guest Log: -rw-------. 1 atlas atlas   1593041 Jul 24 00:54 agis_ddmendpoints.agis.ALL.json
2025-07-23 20:56:25 (3104291): Guest Log: -rw-------. 1 atlas atlas    326013 Jul 24 00:54 log.45697490._004182.job.log.tgz.1
2025-07-23 20:56:25 (3104291): Guest Log: -rw-------. 1 atlas atlas        97 Jul 24 00:55 pilot_heartbeat.json
2025-07-23 20:56:25 (3104291): Guest Log: -rw-------. 1 atlas atlas      7780 Jul 24 00:55 heartbeat.json
2025-07-23 20:56:25 (3104291): Guest Log: -rw-------. 1 atlas atlas       744 Jul 24 00:55 pilotlog.txt
2025-07-23 20:56:25 (3104291): Guest Log: -rw-------. 1 atlas atlas    672846 Jul 24 00:55 log.45697490._004182.job.log.1
2025-07-23 20:56:25 (3104291): Guest Log: -rw-------. 1 atlas atlas       357 Jul 24 00:55 output.list
2025-07-23 20:56:25 (3104291): Guest Log: -rw-r--r--. 1 atlas atlas       620 Jul 24 00:55 runtime_log
2025-07-23 20:56:25 (3104291): Guest Log: -rw-------. 1 atlas atlas   1013760 Jul 24 00:55 result.tar.gz
2025-07-23 20:56:25 (3104291): Guest Log: -rw-r--r--. 1 atlas atlas      8605 Jul 24 00:55 runtime_log.err
2025-07-23 20:56:25 (3104291): Guest Log: -rw-------. 1 atlas atlas       662 Jul 24 00:55 7FVLDmGRey7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDm1fKLDmYO3Ihm.diag
2025-07-23 20:56:25 (3104291): Guest Log: Looking for outputfile HITS.45697490._004182.pool.root.1
2025-07-23 20:56:25 (3104291): Guest Log: HITS file was successfully produced
2025-07-23 20:56:25 (3104291): Guest Log: -rw-------. 1 atlas atlas 308153618 Jul 24 00:54 /home/atlas/RunAtlas/HITS.45697490._004182.pool.root.1
2025-07-23 20:56:25 (3104291): Guest Log: Successfully finished the ATLAS job!
2025-07-23 20:56:25 (3104291): Guest Log: Copying the results back to the shared directory!
2025-07-23 20:56:25 (3104291): Guest Log:  *** Contents of shared directory: ***
2025-07-23 20:56:25 (3104291): Guest Log: total 338248
2025-07-23 20:56:25 (3104291): Guest Log: -rw-r--r--. 1 root root 344771677 Jul 23 19:55 ATLAS.root_0
2025-07-23 20:56:25 (3104291): Guest Log: -rw-r--r--. 1 root root      8922 Jul 23 19:55 init_data.xml
2025-07-23 20:56:25 (3104291): Guest Log: -rw-r--r--. 1 root root    542897 Jul 23 19:55 input.tar.gz
2025-07-23 20:56:25 (3104291): Guest Log: -rw-r--r--. 1 root root   1013760 Jul 24  2025 result.tar.gz
2025-07-23 20:56:25 (3104291): Guest Log: -rw-r--r--. 1 root root     15095 Jul 23 19:55 start_atlas.sh
2025-07-23 20:56:25 (3104291): Guest Log:  *** Success! Shutting down the machine. ***
2025-07-23 20:56:25 (3104291): VM Completion File Detected.
2025-07-23 20:56:25 (3104291): Powering off VM.
2025-07-23 20:56:25 (3104291): Successfully stopped VM.
2025-07-23 20:56:25 (3104291): Deregistering VM. (boinc_69e90fc33ce4ab29, slot#6)
2025-07-23 20:56:25 (3104291): Removing network bandwidth throttle group from VM.
2025-07-23 20:56:25 (3104291): Removing VM from VirtualBox.
20:56:30 (3104291): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN