Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
22:32:14 (1739974): wrapper (7.7.26015): starting
22:32:14 (1739974): wrapper: running run_atlas (--nthreads 12)
[2025-07-23 22:32:14] Arguments: --nthreads 12
[2025-07-23 22:32:14] Threads: 12
[2025-07-23 22:32:14] Checking for CVMFS
[2025-07-23 22:32:14] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-23 22:32:15] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-23 22:32:15] Running cvmfs_config stat atlas.cern.ch
[2025-07-23 22:32:15] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-23 22:32:15] 2.13.1.0 8846 27596 142888 148670 3 65 33781476 46080001 8070 130560 0 242253699 99.905 67710596 26937 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://[2001:718:401:6025:1:0:2:0]:3128 1
[2025-07-23 22:32:15] CVMFS is ok
[2025-07-23 22:32:15] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-07-23 22:32:15] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-07-23 22:32:15] Further information can be found at the LHC@home message board.
[2025-07-23 22:32:15] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-23 22:32:15] Checking for apptainer binary...
[2025-07-23 22:32:15] Using apptainer found in PATH at /usr/bin/apptainer
[2025-07-23 22:32:15] Running /usr/bin/apptainer --version
[2025-07-23 22:32:15] apptainer version 1.4.1-1.el9
[2025-07-23 22:32:15] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-23 22:32:15] mff2101.farm.particle.cz
[2025-07-23 22:32:15] apptainer works
[2025-07-23 22:32:15] Set ATHENA_PROC_NUMBER=12
[2025-07-23 22:32:15] Set ATHENA_CORE_NUMBER=12
[2025-07-23 22:32:15] Starting ATLAS job with PandaID=6741883461
[2025-07-23 22:32:15] Running command: /usr/bin/apptainer exec -B /cvmfs,/scratch/.boinc/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-24 00:00:42]  *** The last 200 lines of the pilot log: ***
[2025-07-24 00:00:42]  protocol_id=None
[2025-07-24 00:00:42]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-07-24 00:00:42]  replicas=None
[2025-07-24 00:00:42]  scope=mc23_13p6TeV
[2025-07-24 00:00:42]  status=None
[2025-07-24 00:00:42]  status_code=0
[2025-07-24 00:00:42]  storage_token=
[2025-07-24 00:00:42]  surl=/scratch/.boinc/slots/2/PanDA_Pilot-6741883461/log.45697472._003894.job.log.tgz.1
[2025-07-24 00:00:42]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/ed/47/log.45697472._003894.job.log.tgz.1
[2025-07-24 00:00:42]  workdir=None
[2025-07-24 00:00:42] ]
[2025-07-24 00:00:42] 2025-07-23 22:00:03,288 | INFO     | transferring file log.45697472._003894.job.log.tgz.1 from /scratch/.boinc/slots/2/PanDA_Pilot-6741883461/log.45697472._003894.job.log.tgz.1 to /scratch/.boinc/slot
[2025-07-24 00:00:42] 2025-07-23 22:00:03,288 | INFO     | executing command: /usr/bin/env mv /scratch/.boinc/slots/2/PanDA_Pilot-6741883461/log.45697472._003894.job.log.tgz.1 /scratch/.boinc/slots/2/log.45697472._003894.j
[2025-07-24 00:00:42] 2025-07-23 22:00:03,318 | INFO     | adding to output.list: log.45697472._003894.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/ed/47/log.45697472._003894.job.log.tg
[2025-07-24 00:00:42] 2025-07-23 22:00:03,319 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-07-24 00:00:42] 2025-07-23 22:00:03,319 | INFO     | summary of transferred files:
[2025-07-24 00:00:42] 2025-07-23 22:00:03,319 | INFO     |  -- lfn=log.45697472._003894.job.log.tgz.1, status_code=0, status=transferred
[2025-07-24 00:00:42] 2025-07-23 22:00:03,319 | INFO     | stage-out finished correctly
[2025-07-24 00:00:42] 2025-07-23 22:00:03,425 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-07-24 00:00:42] 2025-07-23 22:00:03,896 | INFO     | monitor loop #376: job 0:6741883461 is in state 'finished'
[2025-07-24 00:00:42] 2025-07-23 22:00:03,896 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-24 00:00:42] 2025-07-23 22:00:03,911 | INFO     | job 6741883461 has state=finished
[2025-07-24 00:00:42] 2025-07-23 22:00:03,911 | INFO     | preparing for final server update for job 6741883461 in state='finished'
[2025-07-24 00:00:42] 2025-07-23 22:00:03,912 | INFO     | this job has now completed (state=finished)
[2025-07-24 00:00:42] 2025-07-23 22:00:03,912 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-07-24 00:00:42] 2025-07-23 22:00:03,912 | INFO     | log transfer has been attempted: DONE
[2025-07-24 00:00:42] 2025-07-23 22:00:03,912 | INFO     | job 6741883461 has finished - writing final server update
[2025-07-24 00:00:42] 2025-07-23 22:00:03,913 | INFO     | total number of processed events: 400 (read)
[2025-07-24 00:00:42] 2025-07-23 22:00:03,914 | INFO     | executing command: lscpu
[2025-07-24 00:00:42] 2025-07-23 22:00:03,996 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-07-24 00:00:42] 2025-07-23 22:00:05,201 | INFO     | PID=1743960 has CPU usage=14.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2025-07-24 00:00:42] 2025-07-23 22:00:05,201 | INFO     | .. there are 11 such processes running
[2025-07-24 00:00:42] 2025-07-23 22:00:06,400 | INFO     | monitor loop #377: job 0:6741883461 is in state 'finished'
[2025-07-24 00:00:42] 2025-07-23 22:00:06,400 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-24 00:00:42] 2025-07-23 22:00:08,903 | INFO     | monitor loop #378: job 0:6741883461 is in state 'finished'
[2025-07-24 00:00:42] 2025-07-23 22:00:08,903 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-24 00:00:42] 2025-07-23 22:00:09,395 | INFO     | CPU arch script returned: x86-64-v3
[2025-07-24 00:00:42] 2025-07-23 22:00:09,410 | INFO     | found 48 cores (24 cores per socket, 2 sockets) HT, CPU MHz: 2759.0790520833343
[2025-07-24 00:00:42] 2025-07-23 22:00:09,428 | INFO     | using path: /scratch/.boinc/slots/2/PanDA_Pilot-6741883461/memory_monitor_summary.json (trf name=prmon)
[2025-07-24 00:00:42] 2025-07-23 22:00:09,429 | INFO     | extracted standard info from prmon json
[2025-07-24 00:00:42] 2025-07-23 22:00:09,429 | INFO     | extracted standard memory fields from prmon json
[2025-07-24 00:00:42] 2025-07-23 22:00:09,429 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-24 00:00:42] 2025-07-23 22:00:09,429 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-24 00:00:42] 2025-07-23 22:00:09,429 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-24 00:00:42] 2025-07-23 22:00:09,431 | INFO     | fitting pss+swap vs Time
[2025-07-24 00:00:42] 2025-07-23 22:00:09,431 | INFO     | sum of square deviations: 152858680.0
[2025-07-24 00:00:42] 2025-07-23 22:00:09,432 | INFO     | sum of deviations: -8249662875.000002
[2025-07-24 00:00:42] 2025-07-23 22:00:09,432 | INFO     | mean x: 1753305461.0
[2025-07-24 00:00:42] 2025-07-23 22:00:09,432 | INFO     | mean y: 2840956.835443038
[2025-07-24 00:00:42] 2025-07-23 22:00:09,432 | INFO     | -- intersect: 94627359303.75867
[2025-07-24 00:00:42] 2025-07-23 22:00:09,432 | INFO     | intersect: 94627359303.75867
[2025-07-24 00:00:42] 2025-07-23 22:00:09,432 | INFO     | chi2: 0.04925746808952956
[2025-07-24 00:00:42] 2025-07-23 22:00:09,432 | INFO     | -- intersect: 94627359303.75867
[2025-07-24 00:00:42] 2025-07-23 22:00:09,432 | INFO     | current memory leak: -53.97 B/s (using 79 data points, chi2=0.05)
[2025-07-24 00:00:42] 2025-07-23 22:00:09,433 | INFO     | could have reported an average CPU frequency of 2754 MHz (6 samples)
[2025-07-24 00:00:42] 2025-07-23 22:00:09,433 | INFO     | ..............................
[2025-07-24 00:00:42] 2025-07-23 22:00:09,433 | INFO     | . Timing measurements:
[2025-07-24 00:00:42] 2025-07-23 22:00:09,433 | INFO     | . get job = 0 s
[2025-07-24 00:00:42] 2025-07-23 22:00:09,433 | INFO     | . initial setup = 1 s
[2025-07-24 00:00:42] 2025-07-23 22:00:09,433 | INFO     | . payload setup = 8 s
[2025-07-24 00:00:42] 2025-07-23 22:00:09,433 | INFO     | . stage-in = 0 s
[2025-07-24 00:00:42] 2025-07-23 22:00:09,433 | INFO     | . payload execution = 5227 s
[2025-07-24 00:00:42] 2025-07-23 22:00:09,433 | INFO     | . stage-out = 0 s
[2025-07-24 00:00:42] 2025-07-23 22:00:09,434 | INFO     | . log creation = 0 s
[2025-07-24 00:00:42] 2025-07-23 22:00:09,434 | INFO     | ..............................
[2025-07-24 00:00:42] 2025-07-23 22:00:09,530 | INFO     | 
[2025-07-24 00:00:42] 2025-07-23 22:00:09,531 | INFO     | job summary report
[2025-07-24 00:00:42] 2025-07-23 22:00:09,531 | INFO     | --------------------------------------------------
[2025-07-24 00:00:42] 2025-07-23 22:00:09,531 | INFO     | PanDA job id: 6741883461
[2025-07-24 00:00:42] 2025-07-23 22:00:09,531 | INFO     | task id: 45697472
[2025-07-24 00:00:42] 2025-07-23 22:00:09,531 | INFO     | errors: (none)
[2025-07-24 00:00:42] 2025-07-23 22:00:09,531 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-24 00:00:42] 2025-07-23 22:00:09,531 | INFO     | pilot state: finished 
[2025-07-24 00:00:42] 2025-07-23 22:00:09,531 | INFO     | transexitcode: 0
[2025-07-24 00:00:42] 2025-07-23 22:00:09,531 | INFO     | exeerrorcode: 0
[2025-07-24 00:00:42] 2025-07-23 22:00:09,532 | INFO     | exeerrordiag: 
[2025-07-24 00:00:42] 2025-07-23 22:00:09,532 | INFO     | exitcode: 0
[2025-07-24 00:00:42] 2025-07-23 22:00:09,532 | INFO     | exitmsg: OK
[2025-07-24 00:00:42] 2025-07-23 22:00:09,532 | INFO     | cpuconsumptiontime: 54836 s
[2025-07-24 00:00:42] 2025-07-23 22:00:09,532 | INFO     | nevents: 400
[2025-07-24 00:00:42] 2025-07-23 22:00:09,532 | INFO     | neventsw: 0
[2025-07-24 00:00:42] 2025-07-23 22:00:09,532 | INFO     | pid: 1751077
[2025-07-24 00:00:42] 2025-07-23 22:00:09,532 | INFO     | pgrp: 1751077
[2025-07-24 00:00:42] 2025-07-23 22:00:09,532 | INFO     | corecount: 12
[2025-07-24 00:00:42] 2025-07-23 22:00:09,532 | INFO     | event service: False
[2025-07-24 00:00:42] 2025-07-23 22:00:09,532 | INFO     | sizes: {0: 2397257, 1: 2397512, 7: 2397774, 12: 2397802, 5239: 2424149, 5240: 2433149, 5241: 2433333, 5247: 2433527}
[2025-07-24 00:00:42] 2025-07-23 22:00:09,532 | INFO     | --------------------------------------------------
[2025-07-24 00:00:42] 2025-07-23 22:00:09,532 | INFO     | 
[2025-07-24 00:00:42] 2025-07-23 22:00:09,533 | INFO     | executing command: ls -lF /scratch/.boinc/slots/2
[2025-07-24 00:00:42] 2025-07-23 22:00:09,558 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-24 00:00:42] 2025-07-23 22:00:09,559 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-24 00:00:42] 2025-07-23 22:00:09,559 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-24 00:00:42] 2025-07-23 22:00:09,559 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-24 00:00:42] 2025-07-23 22:00:09,559 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-24 00:00:42] 2025-07-23 22:00:09,559 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-24 00:00:42] 2025-07-23 22:00:09,559 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-24 00:00:42] 2025-07-23 22:00:09,559 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-24 00:00:42] 2025-07-23 22:00:09,559 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-24 00:00:42] 2025-07-23 22:00:09,559 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-24 00:00:42] 2025-07-23 22:00:09,559 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-24 00:00:42] 2025-07-23 22:00:09,559 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-24 00:00:42] 2025-07-23 22:00:09,560 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-24 00:00:42] 2025-07-23 22:00:09,560 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-24 00:00:42] 2025-07-23 22:00:09,560 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-24 00:00:42] 2025-07-23 22:00:09,560 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-24 00:00:42] 2025-07-23 22:00:09,560 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-24 00:00:42] 2025-07-23 22:00:09,560 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-24 00:00:42] 2025-07-23 22:00:09,560 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-24 00:00:42] 2025-07-23 22:00:09,560 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-24 00:00:42] 2025-07-23 22:00:09,560 | INFO     | job 6741883461 has completed (purged errors)
[2025-07-24 00:00:42] 2025-07-23 22:00:09,560 | INFO     | overall cleanup function is called
[2025-07-24 00:00:42] 2025-07-23 22:00:10,570 | INFO     | --- collectZombieJob: --- 10, [1751077]
[2025-07-24 00:00:42] 2025-07-23 22:00:10,570 | INFO     | zombie collector waiting for pid 1751077
[2025-07-24 00:00:42] 2025-07-23 22:00:10,570 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-24 00:00:42] 2025-07-23 22:00:10,570 | INFO     | collected zombie processes
[2025-07-24 00:00:42] 2025-07-23 22:00:10,570 | INFO     | will attempt to kill all subprocesses of pid=1751077
[2025-07-24 00:00:42] 2025-07-23 22:00:10,951 | INFO     | process IDs to be killed: [1751077] (in reverse order)
[2025-07-24 00:00:42] 2025-07-23 22:00:11,078 | WARNING  | found no corresponding commands to process id(s)
[2025-07-24 00:00:42] 2025-07-23 22:00:11,079 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-24 00:00:42] 2025-07-23 22:00:11,093 | INFO     | did not find any defunct processes belonging to 1751077
[2025-07-24 00:00:42] 2025-07-23 22:00:11,105 | INFO     | did not find any defunct processes belonging to 1751077
[2025-07-24 00:00:42] 2025-07-23 22:00:11,106 | INFO     | ready for new job
[2025-07-24 00:00:42] 2025-07-23 22:00:11,106 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-24 00:00:42] 2025-07-23 22:00:11,107 | INFO     | ***************************************
[2025-07-24 00:00:42] 2025-07-23 22:00:11,107 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-24 00:00:42] 2025-07-23 22:00:11,108 | INFO     | ***************************************
[2025-07-24 00:00:42] 2025-07-23 22:00:11,108 | INFO     | 
[2025-07-24 00:00:42] 2025-07-23 22:00:11,114 | INFO     | architecture information:
[2025-07-24 00:00:42] 2025-07-23 22:00:11,114 | INFO     | executing command: cat /etc/os-release
[2025-07-24 00:00:42] 2025-07-23 22:00:11,136 | INFO     | cat /etc/os-release:
[2025-07-24 00:00:42] NAME="CentOS Linux"
[2025-07-24 00:00:42] VERSION="7 (Core)"
[2025-07-24 00:00:42] ID="centos"
[2025-07-24 00:00:42] ID_LIKE="rhel fedora"
[2025-07-24 00:00:42] VERSION_ID="7"
[2025-07-24 00:00:42] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-24 00:00:42] ANSI_COLOR="0;31"
[2025-07-24 00:00:42] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-24 00:00:42] HOME_URL="https://www.centos.org/"
[2025-07-24 00:00:42] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-24 00:00:42] 
[2025-07-24 00:00:42] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-24 00:00:42] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-24 00:00:42] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-24 00:00:42] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-24 00:00:42] 
[2025-07-24 00:00:42] 2025-07-23 22:00:11,136 | INFO     | ***************************************
[2025-07-24 00:00:42] 2025-07-23 22:00:11,639 | INFO     | executing command: df -mP /scratch/.boinc/slots/2
[2025-07-24 00:00:42] 2025-07-23 22:00:11,665 | INFO     | sufficient remaining disk space (1675454578688 B)
[2025-07-24 00:00:42] 2025-07-23 22:00:11,665 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-24 00:00:42] 2025-07-23 22:00:11,665 | INFO     | current server update state: UPDATING_FINAL
[2025-07-24 00:00:42] 2025-07-23 22:00:11,666 | INFO     | update_server=False
[2025-07-24 00:00:42] 2025-07-23 22:00:11,666 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-24 00:00:42] 2025-07-23 22:00:11,666 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-24 00:00:42] 2025-07-23 22:00:12,148 | INFO     | all payload control threads have been joined
[2025-07-24 00:00:42] 2025-07-23 22:00:12,392 | INFO     | all data control threads have been joined
[2025-07-24 00:00:42] 2025-07-23 22:00:12,410 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-24 00:00:42] 2025-07-23 22:00:12,411 | INFO     | aborting loop
[2025-07-24 00:00:42] 2025-07-23 22:00:12,671 | INFO     | [job] retrieve thread has finished
[2025-07-24 00:00:42] 2025-07-23 22:00:12,703 | INFO     | [job] validate thread has finished
[2025-07-24 00:00:42] 2025-07-23 22:00:12,809 | INFO     | all job control threads have been joined
[2025-07-24 00:00:42] 2025-07-23 22:00:12,868 | INFO     | [payload] failed_post thread has finished
[2025-07-24 00:00:42] 2025-07-23 22:00:12,872 | INFO     | [data] copytool_in thread has finished
[2025-07-24 00:00:42] 2025-07-23 22:00:12,984 | INFO     | [job] create_data_payload thread has finished
[2025-07-24 00:00:42] 2025-07-23 22:00:13,152 | INFO     | [payload] control thread has finished
[2025-07-24 00:00:42] 2025-07-23 22:00:13,199 | INFO     | [payload] validate_pre thread has finished
[2025-07-24 00:00:42] 2025-07-23 22:00:13,333 | INFO     | [payload] execute_payloads thread has finished
[2025-07-24 00:00:42] 2025-07-23 22:00:13,397 | INFO     | [data] control thread has finished
[2025-07-24 00:00:42] 2025-07-23 22:00:13,416 | INFO     | [job] job monitor thread has finished
[2025-07-24 00:00:42] 2025-07-23 22:00:13,672 | INFO     | [data] copytool_out thread has finished
[2025-07-24 00:00:42] 2025-07-23 22:00:13,814 | INFO     | [job] control thread has finished
[2025-07-24 00:00:42] 2025-07-23 22:00:14,033 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-24 00:00:42] 2025-07-23 22:00:14,143 | INFO     | [payload] validate_post thread has finished
[2025-07-24 00:00:42] 2025-07-23 22:00:14,541 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-24 00:00:42] 2025-07-23 22:00:15,547 | INFO     | [job] queue monitor thread has finished
[2025-07-24 00:00:42] 2025-07-23 22:00:18,039 | INFO     | [data] queue_monitor thread has finished
[2025-07-24 00:00:42] 2025-07-23 22:00:22,339 | INFO     | job.realtimelogging is not enabled
[2025-07-24 00:00:42] 2025-07-23 22:00:23,345 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-24 00:00:42] 2025-07-23 22:00:24,036 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140342877112128)>', '<ExcThread(monitor, started 140342393292544)>']
[2025-07-24 00:00:42] 2025-07-23 22:00:29,062 | INFO     | all workflow threads have been joined
[2025-07-24 00:00:42] 2025-07-23 22:00:29,063 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-24 00:00:42] 2025-07-23 22:00:29,063 | INFO     | traces error code: 0
[2025-07-24 00:00:42] 2025-07-23 22:00:29,063 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-24 00:00:42] 2025-07-23 22:00:41,763 | INFO     | PID=1743960 has CPU usage=3.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-07-24 00:00:42] 2025-07-23 22:00:41,763 | INFO     | .. there are 11 such processes running
[2025-07-24 00:00:42] 2025-07-23 22:00:41,764 | INFO     | found 0 job(s) in 20 queues
[2025-07-24 00:00:42] 2025-07-23 22:00:41,764 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-24 00:00:42] 2025-07-23 22:00:41,764 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-24 00:00:42] 2025-07-23 22:00:41,764 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-24 00:00:42] 2025-07-23 22:00:41,764 | INFO     | [monitor] control thread has ended
[2025-07-24 00:00:42] 2025-07-23 22:00:41,904 [wrapper] ==== pilot stdout END ====
[2025-07-24 00:00:42] 2025-07-23 22:00:41,908 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-24 00:00:42] 2025-07-23 22:00:41,912 [wrapper] pilotpid: 1743960
[2025-07-24 00:00:42] 2025-07-23 22:00:41,916 [wrapper] Pilot exit status: 0
[2025-07-24 00:00:42] 2025-07-23 22:00:41,930 [wrapper] pandaids: 6741883461
[2025-07-24 00:00:42] 2025-07-23 22:00:42,015 [wrapper] cleanup supervisor_pilot 1961177 1743961
[2025-07-24 00:00:42] 2025-07-23 22:00:42,020 [wrapper] Test setup, not cleaning
[2025-07-24 00:00:42] 2025-07-23 22:00:42,023 [wrapper] apfmon messages muted
[2025-07-24 00:00:42] 2025-07-23 22:00:42,026 [wrapper] ==== wrapper stdout END ====
[2025-07-24 00:00:42] 2025-07-23 22:00:42,029 [wrapper] ==== wrapper stderr END ====
[2025-07-24 00:00:42]  *** Error codes and diagnostics ***
[2025-07-24 00:00:42]     "exeErrorCode": 0,
[2025-07-24 00:00:42]     "exeErrorDiag": "",
[2025-07-24 00:00:42]     "pilotErrorCode": 0,
[2025-07-24 00:00:42]     "pilotErrorDiag": "",
[2025-07-24 00:00:42]  *** Listing of results directory ***
[2025-07-24 00:00:42] total 599360
[2025-07-24 00:00:42] -rw-r--r-- 1 boinc boinc    530466 Jul 23 09:18 pilot3.tar.gz
[2025-07-24 00:00:42] -rw-r--r-- 1 boinc boinc      5112 Jul 23 09:18 queuedata.json
[2025-07-24 00:00:42] -rwx------ 1 boinc boinc     36292 Jul 23 09:20 runpilot2-wrapper.sh
[2025-07-24 00:00:42] -rw-r--r-- 1 boinc boinc       100 Jul 23 22:32 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-24 00:00:42] -rwxr-xr-x 1 boinc boinc      7986 Jul 23 22:32 run_atlas
[2025-07-24 00:00:42] -rw-r--r-- 1 boinc boinc       105 Jul 23 22:32 job.xml
[2025-07-24 00:00:42] -rw-r--r-- 2 boinc boinc 331040746 Jul 23 22:32 EVNT.45697470._000179.pool.root.1
[2025-07-24 00:00:42] -rw-r--r-- 1 boinc boinc      6664 Jul 23 22:32 init_data.xml
[2025-07-24 00:00:42] -rw-r--r-- 2 boinc boinc     15095 Jul 23 22:32 start_atlas.sh
[2025-07-24 00:00:42] drwxrwx--x 2 boinc boinc      4096 Jul 23 22:32 shared
[2025-07-24 00:00:42] -rw-r--r-- 2 boinc boinc    542904 Jul 23 22:32 input.tar.gz
[2025-07-24 00:00:42] -rw-r--r-- 1 boinc boinc         0 Jul 23 22:32 boinc_lockfile
[2025-07-24 00:00:42] -rw-r--r-- 1 boinc boinc      2611 Jul 23 22:32 pandaJob.out
[2025-07-24 00:00:42] -rw------- 1 boinc boinc    979632 Jul 23 22:32 agis_schedconf.cvmfs.json
[2025-07-24 00:00:42] -rw------- 1 boinc boinc   1593041 Jul 23 22:32 agis_ddmendpoints.agis.ALL.json
[2025-07-24 00:00:42] drwx------ 4 boinc boinc      4096 Jul 23 22:32 pilot3
[2025-07-24 00:00:42] -rw------- 1 boinc boinc 277058994 Jul 23 23:59 HITS.45697472._003894.pool.root.1
[2025-07-24 00:00:42] -rw-r--r-- 1 boinc boinc       529 Jul 23 23:59 boinc_task_state.xml
[2025-07-24 00:00:42] -rw------- 1 boinc boinc      1023 Jul 23 23:59 memory_monitor_summary.json
[2025-07-24 00:00:42] -rw------- 1 boinc boinc    377951 Jul 24 00:00 log.45697472._003894.job.log.tgz.1
[2025-07-24 00:00:42] -rw------- 1 boinc boinc        95 Jul 24 00:00 pilot_heartbeat.json
[2025-07-24 00:00:42] -rw------- 1 boinc boinc      7776 Jul 24 00:00 heartbeat.json
[2025-07-24 00:00:42] -rw-r--r-- 1 boinc boinc      8192 Jul 24 00:00 boinc_mmap_file
[2025-07-24 00:00:42] -rw-r--r-- 1 boinc boinc        27 Jul 24 00:00 wrapper_checkpoint.txt
[2025-07-24 00:00:42] -rw------- 1 boinc boinc       823 Jul 24 00:00 pilotlog.txt
[2025-07-24 00:00:42] -rw------- 1 boinc boinc    505458 Jul 24 00:00 log.45697472._003894.job.log.1
[2025-07-24 00:00:42] -rw------- 1 boinc boinc       357 Jul 24 00:00 output.list
[2025-07-24 00:00:42] -rw-r--r-- 1 boinc boinc       620 Jul 24 00:00 runtime_log
[2025-07-24 00:00:42] -rw------- 1 boinc boinc    901120 Jul 24 00:00 result.tar.gz
[2025-07-24 00:00:42] -rw-r--r-- 1 boinc boinc      8721 Jul 24 00:00 runtime_log.err
[2025-07-24 00:00:42] -rw------- 1 boinc boinc       664 Jul 24 00:00 i4DNDm4wiy7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmtALLDmv338Sn.diag
[2025-07-24 00:00:42] -rw-r--r-- 1 boinc boinc     21918 Jul 24 00:00 stderr.txt
[2025-07-24 00:00:42] HITS file was successfully produced:
[2025-07-24 00:00:42] -rw------- 1 boinc boinc 277058994 Jul 23 23:59 shared/HITS.pool.root.1
[2025-07-24 00:00:42]  *** Contents of shared directory: ***
[2025-07-24 00:00:42] total 595288
[2025-07-24 00:00:42] -rw-r--r-- 2 boinc boinc 331040746 Jul 23 22:32 ATLAS.root_0
[2025-07-24 00:00:42] -rw-r--r-- 2 boinc boinc     15095 Jul 23 22:32 start_atlas.sh
[2025-07-24 00:00:42] -rw-r--r-- 2 boinc boinc    542904 Jul 23 22:32 input.tar.gz
[2025-07-24 00:00:42] -rw------- 1 boinc boinc 277058994 Jul 23 23:59 HITS.pool.root.1
[2025-07-24 00:00:42] -rw------- 1 boinc boinc    901120 Jul 24 00:00 result.tar.gz
00:00:43 (1739974): run_atlas exited; CPU time 54954.349324
00:00:43 (1739974): called boinc_finish(0)

</stderr_txt>
]]>

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