Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
22:27:47 (2508360): wrapper (7.7.26015): starting
22:27:47 (2508360): wrapper: running run_atlas (--nthreads 12)
[2025-07-23 22:27:47] Arguments: --nthreads 12
[2025-07-23 22:27:47] Threads: 12
[2025-07-23 22:27:47] Checking for CVMFS
[2025-07-23 22:27:47] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-23 22:27:47] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-23 22:27:47] Running cvmfs_config stat atlas.cern.ch
[2025-07-23 22:27:47] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-23 22:27:47] 2.13.1.0 4205 27589 189284 148670 3 196 24880158 46080000 6967 130560 0 224939162 99.914 55895085 24081 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://[2001:718:401:6025:1:0:2:0]:3128 1
[2025-07-23 22:27:47] CVMFS is ok
[2025-07-23 22:27:47] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-07-23 22:27:47] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-07-23 22:27:47] Further information can be found at the LHC@home message board.
[2025-07-23 22:27:47] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-23 22:27:47] Checking for apptainer binary...
[2025-07-23 22:27:47] Using apptainer found in PATH at /usr/bin/apptainer
[2025-07-23 22:27:47] Running /usr/bin/apptainer --version
[2025-07-23 22:27:48] apptainer version 1.4.1-1.el9
[2025-07-23 22:27:48] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-23 22:27:48] mff2104.farm.particle.cz
[2025-07-23 22:27:48] apptainer works
[2025-07-23 22:27:48] Set ATHENA_PROC_NUMBER=12
[2025-07-23 22:27:48] Set ATHENA_CORE_NUMBER=12
[2025-07-23 22:27:48] Starting ATLAS job with PandaID=6741883267
[2025-07-23 22:27:48] Running command: /usr/bin/apptainer exec -B /cvmfs,/scratch/.boinc/slots/3 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-23 23:55:42]  *** The last 200 lines of the pilot log: ***
[2025-07-23 23:55:42]  mtime=0
[2025-07-23 23:55:42]  protocol_id=None
[2025-07-23 23:55:42]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-07-23 23:55:42]  replicas=None
[2025-07-23 23:55:42]  scope=mc23_13p6TeV
[2025-07-23 23:55:42]  status=None
[2025-07-23 23:55:42]  status_code=0
[2025-07-23 23:55:42]  storage_token=
[2025-07-23 23:55:42]  surl=/scratch/.boinc/slots/3/PanDA_Pilot-6741883267/log.45697472._003707.job.log.tgz.1
[2025-07-23 23:55:42]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/90/f6/log.45697472._003707.job.log.tgz.1
[2025-07-23 23:55:42]  workdir=None
[2025-07-23 23:55:42] ]
[2025-07-23 23:55:42] 2025-07-23 21:55:03,681 | INFO     | transferring file log.45697472._003707.job.log.tgz.1 from /scratch/.boinc/slots/3/PanDA_Pilot-6741883267/log.45697472._003707.job.log.tgz.1 to /scratch/.boinc/slot
[2025-07-23 23:55:42] 2025-07-23 21:55:03,682 | INFO     | executing command: /usr/bin/env mv /scratch/.boinc/slots/3/PanDA_Pilot-6741883267/log.45697472._003707.job.log.tgz.1 /scratch/.boinc/slots/3/log.45697472._003707.j
[2025-07-23 23:55:42] 2025-07-23 21:55:03,707 | INFO     | adding to output.list: log.45697472._003707.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/90/f6/log.45697472._003707.job.log.tg
[2025-07-23 23:55:42] 2025-07-23 21:55:03,708 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-07-23 23:55:42] 2025-07-23 21:55:03,708 | INFO     | summary of transferred files:
[2025-07-23 23:55:42] 2025-07-23 21:55:03,708 | INFO     |  -- lfn=log.45697472._003707.job.log.tgz.1, status_code=0, status=transferred
[2025-07-23 23:55:42] 2025-07-23 21:55:03,709 | INFO     | stage-out finished correctly
[2025-07-23 23:55:42] 2025-07-23 21:55:04,619 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-07-23 23:55:42] 2025-07-23 21:55:05,319 | INFO     | job 6741883267 has state=finished
[2025-07-23 23:55:42] 2025-07-23 21:55:05,319 | INFO     | preparing for final server update for job 6741883267 in state='finished'
[2025-07-23 23:55:42] 2025-07-23 21:55:05,320 | INFO     | this job has now completed (state=finished)
[2025-07-23 23:55:42] 2025-07-23 21:55:05,320 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-07-23 23:55:42] 2025-07-23 21:55:05,320 | INFO     | log transfer has been attempted: DONE
[2025-07-23 23:55:42] 2025-07-23 21:55:05,320 | INFO     | job 6741883267 has finished - writing final server update
[2025-07-23 23:55:42] 2025-07-23 21:55:05,321 | INFO     | total number of processed events: 400 (read)
[2025-07-23 23:55:42] 2025-07-23 21:55:05,321 | INFO     | executing command: lscpu
[2025-07-23 23:55:42] 2025-07-23 21:55:05,399 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-07-23 23:55:42] 2025-07-23 21:55:07,356 | WARNING  | process 2519463 can no longer be monitored (due to stat problems) - aborting
[2025-07-23 23:55:42] 2025-07-23 21:55:07,357 | INFO     | using path: /scratch/.boinc/slots/3/PanDA_Pilot-6741883267/memory_monitor_summary.json (trf name=prmon)
[2025-07-23 23:55:42] 2025-07-23 21:55:07,700 | INFO     | number of running child processes to parent process 2519463: 1
[2025-07-23 23:55:42] 2025-07-23 21:55:07,700 | INFO     | maximum number of monitored processes: 6
[2025-07-23 23:55:42] 2025-07-23 21:55:10,178 | INFO     | CPU arch script returned: x86-64-v3
[2025-07-23 23:55:42] 2025-07-23 21:55:10,193 | INFO     | found 48 cores (24 cores per socket, 2 sockets) HT, CPU MHz: 2713.6353020833326
[2025-07-23 23:55:42] 2025-07-23 21:55:10,203 | INFO     | monitor loop #375: job 0:6741883267 is in state 'finished'
[2025-07-23 23:55:42] 2025-07-23 21:55:10,203 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-23 23:55:42] 2025-07-23 21:55:10,210 | INFO     | using path: /scratch/.boinc/slots/3/PanDA_Pilot-6741883267/memory_monitor_summary.json (trf name=prmon)
[2025-07-23 23:55:42] 2025-07-23 21:55:10,211 | INFO     | extracted standard info from prmon json
[2025-07-23 23:55:42] 2025-07-23 21:55:10,211 | INFO     | extracted standard memory fields from prmon json
[2025-07-23 23:55:42] 2025-07-23 21:55:10,211 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-23 23:55:42] 2025-07-23 21:55:10,211 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-23 23:55:42] 2025-07-23 21:55:10,211 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-23 23:55:42] 2025-07-23 21:55:10,213 | INFO     | fitting pss+swap vs Time
[2025-07-23 23:55:42] 2025-07-23 21:55:10,213 | INFO     | sum of square deviations: 152858680.0
[2025-07-23 23:55:42] 2025-07-23 21:55:10,214 | INFO     | sum of deviations: 386016295.9999998
[2025-07-23 23:55:42] 2025-07-23 21:55:10,214 | INFO     | mean x: 1753305195.0
[2025-07-23 23:55:42] 2025-07-23 21:55:10,214 | INFO     | mean y: 2793375.2911392404
[2025-07-23 23:55:42] 2025-07-23 21:55:10,214 | INFO     | -- intersect: -4424854286.794241
[2025-07-23 23:55:42] 2025-07-23 21:55:10,214 | INFO     | intersect: -4424854286.794241
[2025-07-23 23:55:42] 2025-07-23 21:55:10,214 | INFO     | chi2: 0.044207918827705216
[2025-07-23 23:55:42] 2025-07-23 21:55:10,215 | INFO     | -- intersect: -4424854286.794241
[2025-07-23 23:55:42] 2025-07-23 21:55:10,215 | INFO     | current memory leak: 2.53 B/s (using 79 data points, chi2=0.04)
[2025-07-23 23:55:42] 2025-07-23 21:55:10,215 | INFO     | could have reported an average CPU frequency of 2746 MHz (6 samples)
[2025-07-23 23:55:42] 2025-07-23 21:55:10,215 | INFO     | ..............................
[2025-07-23 23:55:42] 2025-07-23 21:55:10,215 | INFO     | . Timing measurements:
[2025-07-23 23:55:42] 2025-07-23 21:55:10,215 | INFO     | . get job = 0 s
[2025-07-23 23:55:42] 2025-07-23 21:55:10,215 | INFO     | . initial setup = 1 s
[2025-07-23 23:55:42] 2025-07-23 21:55:10,215 | INFO     | . payload setup = 8 s
[2025-07-23 23:55:42] 2025-07-23 21:55:10,215 | INFO     | . stage-in = 0 s
[2025-07-23 23:55:42] 2025-07-23 21:55:10,215 | INFO     | . payload execution = 5194 s
[2025-07-23 23:55:42] 2025-07-23 21:55:10,216 | INFO     | . stage-out = 0 s
[2025-07-23 23:55:42] 2025-07-23 21:55:10,216 | INFO     | . log creation = 0 s
[2025-07-23 23:55:42] 2025-07-23 21:55:10,216 | INFO     | ..............................
[2025-07-23 23:55:42] 2025-07-23 21:55:10,307 | INFO     | 
[2025-07-23 23:55:42] 2025-07-23 21:55:10,307 | INFO     | job summary report
[2025-07-23 23:55:42] 2025-07-23 21:55:10,307 | INFO     | --------------------------------------------------
[2025-07-23 23:55:42] 2025-07-23 21:55:10,307 | INFO     | PanDA job id: 6741883267
[2025-07-23 23:55:42] 2025-07-23 21:55:10,307 | INFO     | task id: 45697472
[2025-07-23 23:55:42] 2025-07-23 21:55:10,307 | INFO     | errors: (none)
[2025-07-23 23:55:42] 2025-07-23 21:55:10,307 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-23 23:55:42] 2025-07-23 21:55:10,308 | INFO     | pilot state: finished 
[2025-07-23 23:55:42] 2025-07-23 21:55:10,308 | INFO     | transexitcode: 0
[2025-07-23 23:55:42] 2025-07-23 21:55:10,308 | INFO     | exeerrorcode: 0
[2025-07-23 23:55:42] 2025-07-23 21:55:10,308 | INFO     | exeerrordiag: 
[2025-07-23 23:55:42] 2025-07-23 21:55:10,308 | INFO     | exitcode: 0
[2025-07-23 23:55:42] 2025-07-23 21:55:10,308 | INFO     | exitmsg: OK
[2025-07-23 23:55:42] 2025-07-23 21:55:10,308 | INFO     | cpuconsumptiontime: 55822 s
[2025-07-23 23:55:42] 2025-07-23 21:55:10,308 | INFO     | nevents: 400
[2025-07-23 23:55:42] 2025-07-23 21:55:10,308 | INFO     | neventsw: 0
[2025-07-23 23:55:42] 2025-07-23 21:55:10,308 | INFO     | pid: 2519463
[2025-07-23 23:55:42] 2025-07-23 21:55:10,308 | INFO     | pgrp: 2519463
[2025-07-23 23:55:42] 2025-07-23 21:55:10,308 | INFO     | corecount: 12
[2025-07-23 23:55:42] 2025-07-23 21:55:10,309 | INFO     | event service: False
[2025-07-23 23:55:42] 2025-07-23 21:55:10,309 | INFO     | sizes: {0: 2397535, 6: 2397797, 11: 2397825, 5207: 2424172, 5208: 2433172, 5209: 2433228, 5214: 2433550}
[2025-07-23 23:55:42] 2025-07-23 21:55:10,309 | INFO     | --------------------------------------------------
[2025-07-23 23:55:42] 2025-07-23 21:55:10,309 | INFO     | 
[2025-07-23 23:55:42] 2025-07-23 21:55:10,309 | INFO     | executing command: ls -lF /scratch/.boinc/slots/3
[2025-07-23 23:55:42] 2025-07-23 21:55:10,334 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-23 23:55:42] 2025-07-23 21:55:10,335 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-23 23:55:42] 2025-07-23 21:55:10,335 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-23 23:55:42] 2025-07-23 21:55:10,335 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-23 23:55:42] 2025-07-23 21:55:10,335 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-23 23:55:42] 2025-07-23 21:55:10,335 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-23 23:55:42] 2025-07-23 21:55:10,335 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-23 23:55:42] 2025-07-23 21:55:10,335 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-23 23:55:42] 2025-07-23 21:55:10,335 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-23 23:55:42] 2025-07-23 21:55:10,335 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-23 23:55:42] 2025-07-23 21:55:10,336 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-23 23:55:42] 2025-07-23 21:55:10,336 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-23 23:55:42] 2025-07-23 21:55:10,336 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-23 23:55:42] 2025-07-23 21:55:10,336 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-23 23:55:42] 2025-07-23 21:55:10,336 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-23 23:55:42] 2025-07-23 21:55:10,336 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-23 23:55:42] 2025-07-23 21:55:10,336 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-23 23:55:42] 2025-07-23 21:55:10,336 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-23 23:55:42] 2025-07-23 21:55:10,336 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-23 23:55:42] 2025-07-23 21:55:10,336 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-23 23:55:42] 2025-07-23 21:55:10,336 | INFO     | job 6741883267 has completed (purged errors)
[2025-07-23 23:55:42] 2025-07-23 21:55:10,337 | INFO     | overall cleanup function is called
[2025-07-23 23:55:42] 2025-07-23 21:55:11,347 | INFO     | --- collectZombieJob: --- 10, [2519463]
[2025-07-23 23:55:42] 2025-07-23 21:55:11,347 | INFO     | zombie collector waiting for pid 2519463
[2025-07-23 23:55:42] 2025-07-23 21:55:11,347 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-23 23:55:42] 2025-07-23 21:55:11,347 | INFO     | collected zombie processes
[2025-07-23 23:55:42] 2025-07-23 21:55:11,347 | INFO     | will attempt to kill all subprocesses of pid=2519463
[2025-07-23 23:55:42] 2025-07-23 21:55:11,685 | INFO     | process IDs to be killed: [2519463] (in reverse order)
[2025-07-23 23:55:42] 2025-07-23 21:55:11,799 | WARNING  | found no corresponding commands to process id(s)
[2025-07-23 23:55:42] 2025-07-23 21:55:11,799 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-23 23:55:42] 2025-07-23 21:55:11,811 | INFO     | did not find any defunct processes belonging to 2519463
[2025-07-23 23:55:42] 2025-07-23 21:55:11,821 | INFO     | did not find any defunct processes belonging to 2519463
[2025-07-23 23:55:42] 2025-07-23 21:55:11,821 | INFO     | ready for new job
[2025-07-23 23:55:42] 2025-07-23 21:55:11,821 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-23 23:55:42] 2025-07-23 21:55:11,823 | INFO     | ***************************************
[2025-07-23 23:55:42] 2025-07-23 21:55:11,823 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-23 23:55:42] 2025-07-23 21:55:11,823 | INFO     | ***************************************
[2025-07-23 23:55:42] 2025-07-23 21:55:11,823 | INFO     | 
[2025-07-23 23:55:42] 2025-07-23 21:55:11,829 | INFO     | architecture information:
[2025-07-23 23:55:42] 2025-07-23 21:55:11,829 | INFO     | executing command: cat /etc/os-release
[2025-07-23 23:55:42] 2025-07-23 21:55:11,848 | INFO     | cat /etc/os-release:
[2025-07-23 23:55:42] NAME="CentOS Linux"
[2025-07-23 23:55:42] VERSION="7 (Core)"
[2025-07-23 23:55:42] ID="centos"
[2025-07-23 23:55:42] ID_LIKE="rhel fedora"
[2025-07-23 23:55:42] VERSION_ID="7"
[2025-07-23 23:55:42] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-23 23:55:42] ANSI_COLOR="0;31"
[2025-07-23 23:55:42] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-23 23:55:42] HOME_URL="https://www.centos.org/"
[2025-07-23 23:55:42] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-23 23:55:42] 
[2025-07-23 23:55:42] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-23 23:55:42] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-23 23:55:42] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-23 23:55:42] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-23 23:55:42] 
[2025-07-23 23:55:42] 2025-07-23 21:55:11,849 | INFO     | ***************************************
[2025-07-23 23:55:42] 2025-07-23 21:55:12,352 | INFO     | executing command: df -mP /scratch/.boinc/slots/3
[2025-07-23 23:55:42] 2025-07-23 21:55:12,376 | INFO     | sufficient remaining disk space (1675145248768 B)
[2025-07-23 23:55:42] 2025-07-23 21:55:12,377 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-23 23:55:42] 2025-07-23 21:55:12,377 | INFO     | current server update state: UPDATING_FINAL
[2025-07-23 23:55:42] 2025-07-23 21:55:12,377 | INFO     | update_server=False
[2025-07-23 23:55:42] 2025-07-23 21:55:12,377 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-23 23:55:42] 2025-07-23 21:55:12,378 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-23 23:55:42] 2025-07-23 21:55:12,705 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-07-23 23:55:42] 2025-07-23 21:55:12,705 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-07-23 23:55:42] 2025-07-23 21:55:12,705 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-23 23:55:42] 2025-07-23 21:55:12,706 | INFO     | will abort loop
[2025-07-23 23:55:42] 2025-07-23 21:55:13,142 | INFO     | all job control threads have been joined
[2025-07-23 23:55:42] 2025-07-23 21:55:13,217 | INFO     | all data control threads have been joined
[2025-07-23 23:55:42] 2025-07-23 21:55:13,383 | INFO     | [job] retrieve thread has finished
[2025-07-23 23:55:42] 2025-07-23 21:55:13,431 | INFO     | all payload control threads have been joined
[2025-07-23 23:55:42] 2025-07-23 21:55:13,594 | INFO     | [payload] validate_post thread has finished
[2025-07-23 23:55:42] 2025-07-23 21:55:13,711 | INFO     | [job] job monitor thread has finished
[2025-07-23 23:55:42] 2025-07-23 21:55:14,148 | INFO     | [job] control thread has finished
[2025-07-23 23:55:42] 2025-07-23 21:55:14,222 | INFO     | [data] control thread has finished
[2025-07-23 23:55:42] 2025-07-23 21:55:14,347 | INFO     | [job] validate thread has finished
[2025-07-23 23:55:42] 2025-07-23 21:55:14,383 | INFO     | [data] copytool_out thread has finished
[2025-07-23 23:55:42] 2025-07-23 21:55:14,403 | INFO     | [payload] execute_payloads thread has finished
[2025-07-23 23:55:42] 2025-07-23 21:55:14,436 | INFO     | [payload] control thread has finished
[2025-07-23 23:55:42] 2025-07-23 21:55:14,454 | INFO     | [data] copytool_in thread has finished
[2025-07-23 23:55:42] 2025-07-23 21:55:14,481 | INFO     | [job] create_data_payload thread has finished
[2025-07-23 23:55:42] 2025-07-23 21:55:14,658 | INFO     | [payload] validate_pre thread has finished
[2025-07-23 23:55:42] 2025-07-23 21:55:14,705 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-23 23:55:42] 2025-07-23 21:55:14,902 | INFO     | [payload] failed_post thread has finished
[2025-07-23 23:55:42] 2025-07-23 21:55:15,218 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-23 23:55:42] 2025-07-23 21:55:15,318 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-23 23:55:42] 2025-07-23 21:55:16,319 | INFO     | [job] queue monitor thread has finished
[2025-07-23 23:55:42] 2025-07-23 21:55:19,222 | INFO     | [data] queue_monitor thread has finished
[2025-07-23 23:55:42] 2025-07-23 21:55:21,255 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140462888458048)>', '<ExcThread(monitor, started 140462274901760)>']
[2025-07-23 23:55:42] 2025-07-23 21:55:26,280 | INFO     | all workflow threads have been joined
[2025-07-23 23:55:42] 2025-07-23 21:55:26,281 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-23 23:55:42] 2025-07-23 21:55:26,281 | INFO     | traces error code: 0
[2025-07-23 23:55:42] 2025-07-23 21:55:26,281 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-23 23:55:42] 2025-07-23 21:55:42,644 | INFO     | PID=2512338 has CPU usage=6.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-07-23 23:55:42] 2025-07-23 21:55:42,645 | INFO     | .. there are 8 such processes running
[2025-07-23 23:55:42] 2025-07-23 21:55:42,645 | INFO     | found 0 job(s) in 20 queues
[2025-07-23 23:55:42] 2025-07-23 21:55:42,646 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-23 23:55:42] 2025-07-23 21:55:42,646 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-23 23:55:42] 2025-07-23 21:55:42,646 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-23 23:55:42] 2025-07-23 21:55:42,646 | INFO     | [monitor] control thread has ended
[2025-07-23 23:55:42] 2025-07-23 21:55:42,766 [wrapper] ==== pilot stdout END ====
[2025-07-23 23:55:42] 2025-07-23 21:55:42,768 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-23 23:55:42] 2025-07-23 21:55:42,771 [wrapper] pilotpid: 2512338
[2025-07-23 23:55:42] 2025-07-23 21:55:42,773 [wrapper] Pilot exit status: 0
[2025-07-23 23:55:42] 2025-07-23 21:55:42,785 [wrapper] pandaids: 6741883267
[2025-07-23 23:55:42] 2025-07-23 21:55:42,860 [wrapper] cleanup supervisor_pilot 2668910 2512339
[2025-07-23 23:55:42] 2025-07-23 21:55:42,863 [wrapper] Test setup, not cleaning
[2025-07-23 23:55:42] 2025-07-23 21:55:42,866 [wrapper] apfmon messages muted
[2025-07-23 23:55:42] 2025-07-23 21:55:42,869 [wrapper] ==== wrapper stdout END ====
[2025-07-23 23:55:42] 2025-07-23 21:55:42,872 [wrapper] ==== wrapper stderr END ====
[2025-07-23 23:55:42]  *** Error codes and diagnostics ***
[2025-07-23 23:55:42]     "exeErrorCode": 0,
[2025-07-23 23:55:42]     "exeErrorDiag": "",
[2025-07-23 23:55:42]     "pilotErrorCode": 0,
[2025-07-23 23:55:42]     "pilotErrorDiag": "",
[2025-07-23 23:55:42]  *** Listing of results directory ***
[2025-07-23 23:55:42] total 603172
[2025-07-23 23:55:42] -rw-r--r-- 1 boinc boinc    530466 Jul 23 08:47 pilot3.tar.gz
[2025-07-23 23:55:42] -rwx------ 1 boinc boinc     36292 Jul 23 09:00 runpilot2-wrapper.sh
[2025-07-23 23:55:42] -rw-r--r-- 1 boinc boinc      5112 Jul 23 09:00 queuedata.json
[2025-07-23 23:55:42] -rw-r--r-- 1 boinc boinc       100 Jul 23 22:27 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-23 23:55:42] -rwxr-xr-x 1 boinc boinc      7986 Jul 23 22:27 run_atlas
[2025-07-23 23:55:42] -rw-r--r-- 1 boinc boinc       105 Jul 23 22:27 job.xml
[2025-07-23 23:55:42] -rw-r--r-- 1 boinc boinc      6664 Jul 23 22:27 init_data.xml
[2025-07-23 23:55:42] -rw-r--r-- 2 boinc boinc 329181709 Jul 23 22:27 EVNT.45697470._000172.pool.root.1
[2025-07-23 23:55:42] -rw-r--r-- 2 boinc boinc     15095 Jul 23 22:27 start_atlas.sh
[2025-07-23 23:55:42] drwxrwx--x 2 boinc boinc      4096 Jul 23 22:27 shared
[2025-07-23 23:55:42] -rw-r--r-- 2 boinc boinc    542901 Jul 23 22:27 input.tar.gz
[2025-07-23 23:55:42] -rw-r--r-- 1 boinc boinc         0 Jul 23 22:27 boinc_lockfile
[2025-07-23 23:55:42] -rw-r--r-- 1 boinc boinc      2612 Jul 23 22:27 pandaJob.out
[2025-07-23 23:55:42] -rw------- 1 boinc boinc    979632 Jul 23 22:27 agis_schedconf.cvmfs.json
[2025-07-23 23:55:42] -rw------- 1 boinc boinc   1593041 Jul 23 22:27 agis_ddmendpoints.agis.ALL.json
[2025-07-23 23:55:42] drwx------ 4 boinc boinc      4096 Jul 23 22:27 pilot3
[2025-07-23 23:55:42] -rw------- 1 boinc boinc 282865420 Jul 23 23:54 HITS.45697472._003707.pool.root.1
[2025-07-23 23:55:42] -rw-r--r-- 1 boinc boinc       530 Jul 23 23:54 boinc_task_state.xml
[2025-07-23 23:55:42] -rw------- 1 boinc boinc      1022 Jul 23 23:54 memory_monitor_summary.json
[2025-07-23 23:55:42] -rw------- 1 boinc boinc    361286 Jul 23 23:55 log.45697472._003707.job.log.tgz.1
[2025-07-23 23:55:42] -rw------- 1 boinc boinc      7772 Jul 23 23:55 heartbeat.json
[2025-07-23 23:55:42] -rw-r--r-- 1 boinc boinc        27 Jul 23 23:55 wrapper_checkpoint.txt
[2025-07-23 23:55:42] -rw-r--r-- 1 boinc boinc      8192 Jul 23 23:55 boinc_mmap_file
[2025-07-23 23:55:42] -rw------- 1 boinc boinc        95 Jul 23 23:55 pilot_heartbeat.json
[2025-07-23 23:55:42] -rw------- 1 boinc boinc       822 Jul 23 23:55 pilotlog.txt
[2025-07-23 23:55:42] -rw------- 1 boinc boinc    501686 Jul 23 23:55 log.45697472._003707.job.log.1
[2025-07-23 23:55:42] -rw------- 1 boinc boinc       357 Jul 23 23:55 output.list
[2025-07-23 23:55:42] -rw-r--r-- 1 boinc boinc       620 Jul 23 23:55 runtime_log
[2025-07-23 23:55:42] -rw------- 1 boinc boinc    880640 Jul 23 23:55 result.tar.gz
[2025-07-23 23:55:42] -rw-r--r-- 1 boinc boinc      8721 Jul 23 23:55 runtime_log.err
[2025-07-23 23:55:42] -rw------- 1 boinc boinc       663 Jul 23 23:55 4awLDm9diy7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmT9KLDmi5C9Jo.diag
[2025-07-23 23:55:42] -rw-r--r-- 1 boinc boinc     21761 Jul 23 23:55 stderr.txt
[2025-07-23 23:55:42] HITS file was successfully produced:
[2025-07-23 23:55:42] -rw------- 1 boinc boinc 282865420 Jul 23 23:54 shared/HITS.pool.root.1
[2025-07-23 23:55:42]  *** Contents of shared directory: ***
[2025-07-23 23:55:42] total 599120
[2025-07-23 23:55:42] -rw-r--r-- 2 boinc boinc 329181709 Jul 23 22:27 ATLAS.root_0
[2025-07-23 23:55:42] -rw-r--r-- 2 boinc boinc     15095 Jul 23 22:27 start_atlas.sh
[2025-07-23 23:55:42] -rw-r--r-- 2 boinc boinc    542901 Jul 23 22:27 input.tar.gz
[2025-07-23 23:55:42] -rw------- 1 boinc boinc 282865420 Jul 23 23:54 HITS.pool.root.1
[2025-07-23 23:55:42] -rw------- 1 boinc boinc    880640 Jul 23 23:55 result.tar.gz
23:55:44 (2508360): run_atlas exited; CPU time 55917.989268
23:55:44 (2508360): called boinc_finish(0)

</stderr_txt>
]]>

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