Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
09:27:19 (2478962): wrapper (7.7.26015): starting
09:27:19 (2478962): wrapper: running run_atlas (--nthreads 3)
[2025-07-24 09:27:19] Arguments: --nthreads 3
[2025-07-24 09:27:19] Threads: 3
[2025-07-24 09:27:19] Checking for CVMFS
[2025-07-24 09:27:19] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-24 09:27:19] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-24 09:27:19] Running cvmfs_config stat atlas.cern.ch
[2025-07-24 09:27:19] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-24 09:27:19] 2.9.2.0 1693042 3355 81684 148686 0 56 10457940 36864001 0 130560 0 2055514 99.987 121996 2469 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-07-24 09:27:19] CVMFS is ok
[2025-07-24 09:27:19] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-07-24 09:27:19] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-07-24 09:27:19] Further information can be found at the LHC@home message board.
[2025-07-24 09:27:19] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-24 09:27:19] Checking for apptainer binary...
[2025-07-24 09:27:19] Using apptainer found in PATH at /usr/bin/apptainer
[2025-07-24 09:27:19] Running /usr/bin/apptainer --version
[2025-07-24 09:27:19] apptainer version 1.4.1-1.1
[2025-07-24 09:27:19] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-24 09:27:19] magicA250a
[2025-07-24 09:27:19] apptainer works
[2025-07-24 09:27:19] Set ATHENA_PROC_NUMBER=3
[2025-07-24 09:27:19] Set ATHENA_CORE_NUMBER=3
[2025-07-24 09:27:19] Starting ATLAS job with PandaID=6741883307
[2025-07-24 09:27:19] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-24 11:30:22]  *** The last 200 lines of the pilot log: ***
[2025-07-24 11:30:22] 2025-07-24 09:29:48,149 | INFO     | executing command: lscpu
[2025-07-24 11:30:22] 2025-07-24 09:29:48,163 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-07-24 11:30:22] 2025-07-24 09:29:48,619 | INFO     | monitor loop #565: job 0:6741883307 is in state 'finished'
[2025-07-24 11:30:22] 2025-07-24 09:29:48,619 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-24 11:30:22] 2025-07-24 09:29:50,287 | INFO     | CPU arch script returned: x86-64-v3
[2025-07-24 11:30:22] 2025-07-24 09:29:50,288 | INFO     | found 6 cores (6 cores per socket, 1 socket) HT, CPU MHz: 3630.046666666667
[2025-07-24 11:30:22] 2025-07-24 09:29:50,289 | INFO     | using path: /local/data/boinc/slots/0/PanDA_Pilot-6741883307/memory_monitor_summary.json (trf name=prmon)
[2025-07-24 11:30:22] 2025-07-24 09:29:50,289 | INFO     | extracted standard info from prmon json
[2025-07-24 11:30:22] 2025-07-24 09:29:50,289 | INFO     | extracted standard memory fields from prmon json
[2025-07-24 11:30:22] 2025-07-24 09:29:50,289 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-24 11:30:22] 2025-07-24 09:29:50,289 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-24 11:30:22] 2025-07-24 09:29:50,289 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-24 11:30:22] 2025-07-24 09:29:50,290 | INFO     | fitting pss+swap vs Time
[2025-07-24 11:30:22] 2025-07-24 09:29:50,290 | INFO     | sum of square deviations: 535786790.0
[2025-07-24 11:30:22] 2025-07-24 09:29:50,291 | INFO     | sum of deviations: -7701882325.999997
[2025-07-24 11:30:22] 2025-07-24 09:29:50,291 | INFO     | mean x: 1753345693.5
[2025-07-24 11:30:22] 2025-07-24 09:29:50,291 | INFO     | mean y: 2449149.1166666667
[2025-07-24 11:30:22] 2025-07-24 09:29:50,291 | INFO     | -- intersect: 25206620771.444004
[2025-07-24 11:30:22] 2025-07-24 09:29:50,291 | INFO     | intersect: 25206620771.444004
[2025-07-24 11:30:22] 2025-07-24 09:29:50,291 | INFO     | chi2: 1.5921889241445004
[2025-07-24 11:30:22] 2025-07-24 09:29:50,291 | INFO     | sum of square deviations: 471562330.0
[2025-07-24 11:30:22] 2025-07-24 09:29:50,291 | INFO     | sum of deviations: -6564948527.0
[2025-07-24 11:30:22] 2025-07-24 09:29:50,291 | INFO     | mean x: 1753345541.0
[2025-07-24 11:30:22] 2025-07-24 09:29:50,291 | INFO     | mean y: 2451850.295652174
[2025-07-24 11:30:22] 2025-07-24 09:29:50,291 | INFO     | -- intersect: 24411999633.109364
[2025-07-24 11:30:22] 2025-07-24 09:29:50,291 | INFO     | intersect: 24411999633.109364
[2025-07-24 11:30:22] 2025-07-24 09:29:50,291 | INFO     | chi2: 1.5933156533402115
[2025-07-24 11:30:22] 2025-07-24 09:29:50,291 | INFO     | current chi2=1.5933156533402115 (change=-0.07076604909285562 %)
[2025-07-24 11:30:22] 2025-07-24 09:29:50,291 | INFO     | right removable region: 114
[2025-07-24 11:30:22] 2025-07-24 09:29:50,291 | INFO     | sum of square deviations: 471562330.0
[2025-07-24 11:30:22] 2025-07-24 09:29:50,292 | INFO     | sum of deviations: -23219629382.000008
[2025-07-24 11:30:22] 2025-07-24 09:29:50,292 | INFO     | mean x: 1753345846.0
[2025-07-24 11:30:22] 2025-07-24 09:29:50,292 | INFO     | mean y: 2485055.539130435
[2025-07-24 11:30:22] 2025-07-24 09:29:50,292 | INFO     | -- intersect: 86336863636.18033
[2025-07-24 11:30:22] 2025-07-24 09:29:50,292 | INFO     | intersect: 86336863636.18033
[2025-07-24 11:30:22] 2025-07-24 09:29:50,292 | INFO     | chi2: 0.08012409620282397
[2025-07-24 11:30:22] 2025-07-24 09:29:50,292 | INFO     | current chi2=0.08012409620282397 (change=94.96767657482133 %)
[2025-07-24 11:30:22] 2025-07-24 09:29:50,292 | INFO     | sum of square deviations: 412686807.5
[2025-07-24 11:30:22] 2025-07-24 09:29:50,292 | INFO     | sum of deviations: -18757099321.500004
[2025-07-24 11:30:22] 2025-07-24 09:29:50,292 | INFO     | mean x: 1753345998.5
[2025-07-24 11:30:22] 2025-07-24 09:29:50,292 | INFO     | mean y: 2473481.881818182
[2025-07-24 11:30:22] 2025-07-24 09:29:50,292 | INFO     | -- intersect: 79694105104.53575
[2025-07-24 11:30:22] 2025-07-24 09:29:50,292 | INFO     | intersect: 79694105104.53575
[2025-07-24 11:30:22] 2025-07-24 09:29:50,292 | INFO     | chi2: 0.07284851786866092
[2025-07-24 11:30:22] 2025-07-24 09:29:50,292 | INFO     | current chi2=0.07284851786866092 (change=9.080387397750918 %)
[2025-07-24 11:30:22] 2025-07-24 09:29:50,292 | INFO     | left removable region: 20
[2025-07-24 11:30:22] 2025-07-24 09:29:50,292 | INFO     | sum of square deviations: 257521107.5
[2025-07-24 11:30:22] 2025-07-24 09:29:50,292 | INFO     | sum of deviations: -12372624357.5
[2025-07-24 11:30:22] 2025-07-24 09:29:50,293 | INFO     | mean x: 1753346120.5
[2025-07-24 11:30:22] 2025-07-24 09:29:50,293 | INFO     | mean y: 2463067.6063829786
[2025-07-24 11:30:22] 2025-07-24 09:29:50,293 | INFO     | -- intersect: 84242132305.69565
[2025-07-24 11:30:22] 2025-07-24 09:29:50,293 | INFO     | intersect: 84242132305.69565
[2025-07-24 11:30:22] 2025-07-24 09:29:50,293 | INFO     | chi2: 0.06642213068265873
[2025-07-24 11:30:22] 2025-07-24 09:29:50,293 | INFO     | -- intersect: 84242132305.69565
[2025-07-24 11:30:22] 2025-07-24 09:29:50,293 | INFO     | current memory leak: -48.05 B/s (using 94 data points, chi2=0.07)
[2025-07-24 11:30:22] 2025-07-24 09:29:50,293 | INFO     | could have reported an average CPU frequency of 3768 MHz (8 samples)
[2025-07-24 11:30:22] 2025-07-24 09:29:50,293 | INFO     | ..............................
[2025-07-24 11:30:22] 2025-07-24 09:29:50,293 | INFO     | . Timing measurements:
[2025-07-24 11:30:22] 2025-07-24 09:29:50,293 | INFO     | . get job = 0 s
[2025-07-24 11:30:22] 2025-07-24 09:29:50,293 | INFO     | . initial setup = 1 s
[2025-07-24 11:30:22] 2025-07-24 09:29:50,293 | INFO     | . payload setup = 3 s
[2025-07-24 11:30:22] 2025-07-24 09:29:50,293 | INFO     | . stage-in = 0 s
[2025-07-24 11:30:22] 2025-07-24 09:29:50,293 | INFO     | . payload execution = 7319 s
[2025-07-24 11:30:22] 2025-07-24 09:29:50,293 | INFO     | . stage-out = 0 s
[2025-07-24 11:30:22] 2025-07-24 09:29:50,293 | INFO     | . log creation = 0 s
[2025-07-24 11:30:22] 2025-07-24 09:29:50,293 | INFO     | ..............................
[2025-07-24 11:30:22] 2025-07-24 09:29:50,763 | INFO     | 
[2025-07-24 11:30:22] 2025-07-24 09:29:50,763 | INFO     | job summary report
[2025-07-24 11:30:22] 2025-07-24 09:29:50,763 | INFO     | --------------------------------------------------
[2025-07-24 11:30:22] 2025-07-24 09:29:50,763 | INFO     | PanDA job id: 6741883307
[2025-07-24 11:30:22] 2025-07-24 09:29:50,763 | INFO     | task id: 45697472
[2025-07-24 11:30:22] 2025-07-24 09:29:50,763 | INFO     | errors: (none)
[2025-07-24 11:30:22] 2025-07-24 09:29:50,764 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-24 11:30:22] 2025-07-24 09:29:50,764 | INFO     | pilot state: finished 
[2025-07-24 11:30:22] 2025-07-24 09:29:50,764 | INFO     | transexitcode: 0
[2025-07-24 11:30:22] 2025-07-24 09:29:50,764 | INFO     | exeerrorcode: 0
[2025-07-24 11:30:22] 2025-07-24 09:29:50,764 | INFO     | exeerrordiag: 
[2025-07-24 11:30:22] 2025-07-24 09:29:50,764 | INFO     | exitcode: 0
[2025-07-24 11:30:22] 2025-07-24 09:29:50,764 | INFO     | exitmsg: OK
[2025-07-24 11:30:22] 2025-07-24 09:29:50,764 | INFO     | cpuconsumptiontime: 21308 s
[2025-07-24 11:30:22] 2025-07-24 09:29:50,764 | INFO     | nevents: 400
[2025-07-24 11:30:22] 2025-07-24 09:29:50,764 | INFO     | neventsw: 0
[2025-07-24 11:30:22] 2025-07-24 09:29:50,764 | INFO     | pid: 2489086
[2025-07-24 11:30:22] 2025-07-24 09:29:50,764 | INFO     | pgrp: 2489086
[2025-07-24 11:30:22] 2025-07-24 09:29:50,764 | INFO     | corecount: 3
[2025-07-24 11:30:22] 2025-07-24 09:29:50,764 | INFO     | event service: False
[2025-07-24 11:30:22] 2025-07-24 09:29:50,764 | INFO     | sizes: {0: 2396706, 1: 2397565, 3: 2397827, 11: 2397855, 7326: 2425549, 7327: 2434553, 7329: 2434737, 7333: 2434931}
[2025-07-24 11:30:22] 2025-07-24 09:29:50,764 | INFO     | --------------------------------------------------
[2025-07-24 11:30:22] 2025-07-24 09:29:50,764 | INFO     | 
[2025-07-24 11:30:22] 2025-07-24 09:29:50,764 | INFO     | executing command: ls -lF /local/data/boinc/slots/0
[2025-07-24 11:30:22] 2025-07-24 09:29:50,778 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-24 11:30:22] 2025-07-24 09:29:50,778 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-24 11:30:22] 2025-07-24 09:29:50,778 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-24 11:30:22] 2025-07-24 09:29:50,778 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-24 11:30:22] 2025-07-24 09:29:50,778 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-24 11:30:22] 2025-07-24 09:29:50,778 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-24 11:30:22] 2025-07-24 09:29:50,778 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-24 11:30:22] 2025-07-24 09:29:50,778 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-24 11:30:22] 2025-07-24 09:29:50,778 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-24 11:30:22] 2025-07-24 09:29:50,778 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-24 11:30:22] 2025-07-24 09:29:50,778 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-24 11:30:22] 2025-07-24 09:29:50,778 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-24 11:30:22] 2025-07-24 09:29:50,778 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-24 11:30:22] 2025-07-24 09:29:50,778 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-24 11:30:22] 2025-07-24 09:29:50,778 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-24 11:30:22] 2025-07-24 09:29:50,778 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-24 11:30:22] 2025-07-24 09:29:50,778 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-24 11:30:22] 2025-07-24 09:29:50,778 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-24 11:30:22] 2025-07-24 09:29:50,779 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-24 11:30:22] 2025-07-24 09:29:50,779 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-24 11:30:22] 2025-07-24 09:29:50,779 | INFO     | job 6741883307 has completed (purged errors)
[2025-07-24 11:30:22] 2025-07-24 09:29:50,779 | INFO     | overall cleanup function is called
[2025-07-24 11:30:22] 2025-07-24 09:29:51,785 | INFO     | --- collectZombieJob: --- 10, [2489086]
[2025-07-24 11:30:22] 2025-07-24 09:29:51,786 | INFO     | zombie collector waiting for pid 2489086
[2025-07-24 11:30:22] 2025-07-24 09:29:51,786 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-24 11:30:22] 2025-07-24 09:29:51,786 | INFO     | collected zombie processes
[2025-07-24 11:30:22] 2025-07-24 09:29:51,786 | INFO     | will attempt to kill all subprocesses of pid=2489086
[2025-07-24 11:30:22] 2025-07-24 09:29:51,826 | INFO     | process IDs to be killed: [2489086] (in reverse order)
[2025-07-24 11:30:22] 2025-07-24 09:29:51,849 | WARNING  | found no corresponding commands to process id(s)
[2025-07-24 11:30:22] 2025-07-24 09:29:51,849 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-24 11:30:22] 2025-07-24 09:29:51,850 | INFO     | did not find any defunct processes belonging to 2489086
[2025-07-24 11:30:22] 2025-07-24 09:29:51,851 | INFO     | did not find any defunct processes belonging to 2489086
[2025-07-24 11:30:22] 2025-07-24 09:29:51,851 | INFO     | ready for new job
[2025-07-24 11:30:22] 2025-07-24 09:29:51,852 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-24 11:30:22] 2025-07-24 09:29:51,852 | INFO     | ***************************************
[2025-07-24 11:30:22] 2025-07-24 09:29:51,852 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-24 11:30:22] 2025-07-24 09:29:51,852 | INFO     | ***************************************
[2025-07-24 11:30:22] 2025-07-24 09:29:51,852 | INFO     | 
[2025-07-24 11:30:22] 2025-07-24 09:29:51,853 | INFO     | architecture information:
[2025-07-24 11:30:22] 2025-07-24 09:29:51,853 | INFO     | executing command: cat /etc/os-release
[2025-07-24 11:30:22] 2025-07-24 09:29:51,861 | INFO     | cat /etc/os-release:
[2025-07-24 11:30:22] NAME="CentOS Linux"
[2025-07-24 11:30:22] VERSION="7 (Core)"
[2025-07-24 11:30:22] ID="centos"
[2025-07-24 11:30:22] ID_LIKE="rhel fedora"
[2025-07-24 11:30:22] VERSION_ID="7"
[2025-07-24 11:30:22] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-24 11:30:22] ANSI_COLOR="0;31"
[2025-07-24 11:30:22] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-24 11:30:22] HOME_URL="https://www.centos.org/"
[2025-07-24 11:30:22] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-24 11:30:22] 
[2025-07-24 11:30:22] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-24 11:30:22] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-24 11:30:22] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-24 11:30:22] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-24 11:30:22] 
[2025-07-24 11:30:22] 2025-07-24 09:29:51,861 | INFO     | ***************************************
[2025-07-24 11:30:22] 2025-07-24 09:29:52,364 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2025-07-24 11:30:22] 2025-07-24 09:29:52,376 | INFO     | sufficient remaining disk space (349926588416 B)
[2025-07-24 11:30:22] 2025-07-24 09:29:52,376 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-24 11:30:22] 2025-07-24 09:29:52,377 | INFO     | current server update state: UPDATING_FINAL
[2025-07-24 11:30:22] 2025-07-24 09:29:52,377 | INFO     | update_server=False
[2025-07-24 11:30:22] 2025-07-24 09:29:52,377 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-24 11:30:22] 2025-07-24 09:29:52,377 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-24 11:30:22] 2025-07-24 09:29:52,377 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-24 11:30:22] 2025-07-24 09:29:52,377 | INFO     | aborting loop
[2025-07-24 11:30:22] 2025-07-24 09:29:52,377 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-24 11:30:22] 2025-07-24 09:29:52,958 | INFO     | all payload control threads have been joined
[2025-07-24 11:30:22] 2025-07-24 09:29:53,296 | INFO     | all job control threads have been joined
[2025-07-24 11:30:22] 2025-07-24 09:29:53,382 | INFO     | [job] retrieve thread has finished
[2025-07-24 11:30:22] 2025-07-24 09:29:53,383 | INFO     | [job] job monitor thread has finished
[2025-07-24 11:30:22] 2025-07-24 09:29:53,474 | INFO     | all data control threads have been joined
[2025-07-24 11:30:22] 2025-07-24 09:29:53,598 | INFO     | [payload] failed_post thread has finished
[2025-07-24 11:30:22] 2025-07-24 09:29:53,964 | INFO     | [payload] control thread has finished
[2025-07-24 11:30:22] 2025-07-24 09:29:53,967 | INFO     | [payload] validate_post thread has finished
[2025-07-24 11:30:22] 2025-07-24 09:29:54,179 | INFO     | [data] copytool_in thread has finished
[2025-07-24 11:30:22] 2025-07-24 09:29:54,302 | INFO     | [job] control thread has finished
[2025-07-24 11:30:22] 2025-07-24 09:29:54,383 | INFO     | [data] copytool_out thread has finished
[2025-07-24 11:30:22] 2025-07-24 09:29:54,472 | INFO     | [payload] execute_payloads thread has finished
[2025-07-24 11:30:22] 2025-07-24 09:29:54,480 | INFO     | [data] control thread has finished
[2025-07-24 11:30:22] 2025-07-24 09:29:54,779 | INFO     | [job] validate thread has finished
[2025-07-24 11:30:22] 2025-07-24 09:29:54,865 | INFO     | [job] create_data_payload thread has finished
[2025-07-24 11:30:22] 2025-07-24 09:29:54,873 | INFO     | [payload] validate_pre thread has finished
[2025-07-24 11:30:22] 2025-07-24 09:29:55,335 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-24 11:30:22] 2025-07-24 09:29:56,341 | INFO     | [job] queue monitor thread has finished
[2025-07-24 11:30:22] 2025-07-24 09:29:56,383 | INFO     | [data] queue_monitor thread has finished
[2025-07-24 11:30:22] 2025-07-24 09:30:03,205 | INFO     | job.realtimelogging is not enabled
[2025-07-24 11:30:22] 2025-07-24 09:30:04,210 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-24 11:30:22] 2025-07-24 09:30:04,596 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139892556904256)>', '<ExcThread(monitor, started 139891664983808)>']
[2025-07-24 11:30:22] 2025-07-24 09:30:09,622 | INFO     | all workflow threads have been joined
[2025-07-24 11:30:22] 2025-07-24 09:30:09,622 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-24 11:30:22] 2025-07-24 09:30:09,622 | INFO     | traces error code: 0
[2025-07-24 11:30:22] 2025-07-24 09:30:09,623 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-24 11:30:22] 2025-07-24 09:30:22,147 | INFO     | PID=2482601 has CPU usage=0.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-07-24 11:30:22] 2025-07-24 09:30:22,147 | INFO     | found 0 job(s) in 20 queues
[2025-07-24 11:30:22] 2025-07-24 09:30:22,147 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-24 11:30:22] 2025-07-24 09:30:22,147 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-24 11:30:22] 2025-07-24 09:30:22,147 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-24 11:30:22] 2025-07-24 09:30:22,147 | INFO     | [monitor] control thread has ended
[2025-07-24 11:30:22] 2025-07-24 09:30:22,193 [wrapper] ==== pilot stdout END ====
[2025-07-24 11:30:22] 2025-07-24 09:30:22,195 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-24 11:30:22] 2025-07-24 09:30:22,197 [wrapper] pilotpid: 2482601
[2025-07-24 11:30:22] 2025-07-24 09:30:22,200 [wrapper] Pilot exit status: 0
[2025-07-24 11:30:22] 2025-07-24 09:30:22,207 [wrapper] pandaids: 6741883307
[2025-07-24 11:30:22] 2025-07-24 09:30:22,222 [wrapper] cleanup supervisor_pilot 2503835 2482602
[2025-07-24 11:30:22] 2025-07-24 09:30:22,224 [wrapper] Test setup, not cleaning
[2025-07-24 11:30:22] 2025-07-24 09:30:22,226 [wrapper] apfmon messages muted
[2025-07-24 11:30:22] 2025-07-24 09:30:22,228 [wrapper] ==== wrapper stdout END ====
[2025-07-24 11:30:22] 2025-07-24 09:30:22,230 [wrapper] ==== wrapper stderr END ====
[2025-07-24 11:30:22]  *** Error codes and diagnostics ***
[2025-07-24 11:30:22]     "exeErrorCode": 0,
[2025-07-24 11:30:22]     "exeErrorDiag": "",
[2025-07-24 11:30:22]     "pilotErrorCode": 0,
[2025-07-24 11:30:22]     "pilotErrorDiag": "",
[2025-07-24 11:30:22]  *** Listing of results directory ***
[2025-07-24 11:30:22] total 603964
[2025-07-24 11:30:22] -rw-r--r-- 1 boinc boinc    530466 Jul 23 08:47 pilot3.tar.gz
[2025-07-24 11:30:22] -rw-r--r-- 1 boinc boinc      5112 Jul 23 09:00 queuedata.json
[2025-07-24 11:30:22] -rwx------ 1 boinc boinc     36292 Jul 23 09:01 runpilot2-wrapper.sh
[2025-07-24 11:30:22] -rw-r--r-- 1 boinc boinc       100 Jul 24 09:27 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-24 11:30:22] -rwxr-xr-x 1 boinc boinc      7986 Jul 24 09:27 run_atlas
[2025-07-24 11:30:22] -rw-r--r-- 1 boinc boinc       105 Jul 24 09:27 job.xml
[2025-07-24 11:30:22] -rw-r--r-- 2 boinc boinc 331370092 Jul 24 09:27 EVNT.45697470._000173.pool.root.1
[2025-07-24 11:30:22] -rw-r--r-- 2 boinc boinc    542903 Jul 24 09:27 input.tar.gz
[2025-07-24 11:30:22] -rw-r--r-- 2 boinc boinc     15095 Jul 24 09:27 start_atlas.sh
[2025-07-24 11:30:22] drwxrwx--x 2 boinc boinc      4096 Jul 24 09:27 shared
[2025-07-24 11:30:22] -rw-r--r-- 1 boinc boinc         0 Jul 24 09:27 boinc_setup_complete
[2025-07-24 11:30:22] -rw-r--r-- 1 boinc boinc      6445 Jul 24 09:27 init_data.xml
[2025-07-24 11:30:22] -rw-r--r-- 1 boinc boinc         0 Jul 24 09:27 boinc_lockfile
[2025-07-24 11:30:22] -rw-r--r-- 1 boinc boinc      2612 Jul 24 09:27 pandaJob.out
[2025-07-24 11:30:22] -rw------- 1 boinc boinc    978866 Jul 24 09:27 agis_schedconf.cvmfs.json
[2025-07-24 11:30:22] -rw------- 1 boinc boinc   1593041 Jul 24 09:27 agis_ddmendpoints.agis.ALL.json
[2025-07-24 11:30:22] drwx------ 4 boinc boinc      4096 Jul 24 09:27 pilot3
[2025-07-24 11:30:22] -rw------- 1 boinc boinc 281290051 Jul 24 11:29 HITS.45697472._003747.pool.root.1
[2025-07-24 11:30:22] -rw-r--r-- 1 boinc boinc       529 Jul 24 11:29 boinc_task_state.xml
[2025-07-24 11:30:22] -rw------- 1 boinc boinc      1024 Jul 24 11:29 memory_monitor_summary.json
[2025-07-24 11:30:22] -rw------- 1 boinc boinc    264582 Jul 24 11:29 log.45697472._003747.job.log.tgz.1
[2025-07-24 11:30:22] -rw------- 1 boinc boinc      7768 Jul 24 11:29 heartbeat.json
[2025-07-24 11:30:22] -rw-r--r-- 1 boinc boinc        27 Jul 24 11:30 wrapper_checkpoint.txt
[2025-07-24 11:30:22] -rw-r--r-- 1 boinc boinc      8192 Jul 24 11:30 boinc_mmap_file
[2025-07-24 11:30:22] -rw------- 1 boinc boinc       747 Jul 24 11:30 pilotlog.txt
[2025-07-24 11:30:22] -rw------- 1 boinc boinc        95 Jul 24 11:30 pilot_heartbeat.json
[2025-07-24 11:30:22] -rw------- 1 boinc boinc    697082 Jul 24 11:30 log.45697472._003747.job.log.1
[2025-07-24 11:30:22] -rw------- 1 boinc boinc       357 Jul 24 11:30 output.list
[2025-07-24 11:30:22] -rw-r--r-- 1 boinc boinc       620 Jul 24 11:30 runtime_log
[2025-07-24 11:30:22] -rw------- 1 boinc boinc    983040 Jul 24 11:30 result.tar.gz
[2025-07-24 11:30:22] -rw-r--r-- 1 boinc boinc      8754 Jul 24 11:30 runtime_log.err
[2025-07-24 11:30:22] -rw------- 1 boinc boinc       663 Jul 24 11:30 pMmKDm8eiy7n9Rq4apOajLDm4fhM0noT9bVof3QYDmouvKDmtA5uen.diag
[2025-07-24 11:30:22] -rw-r--r-- 1 boinc boinc     21203 Jul 24 11:30 stderr.txt
[2025-07-24 11:30:22] HITS file was successfully produced:
[2025-07-24 11:30:22] -rw------- 1 boinc boinc 281290051 Jul 24 11:29 shared/HITS.pool.root.1
[2025-07-24 11:30:22]  *** Contents of shared directory: ***
[2025-07-24 11:30:22] total 599820
[2025-07-24 11:30:22] -rw-r--r-- 2 boinc boinc 331370092 Jul 24 09:27 ATLAS.root_0
[2025-07-24 11:30:22] -rw-r--r-- 2 boinc boinc    542903 Jul 24 09:27 input.tar.gz
[2025-07-24 11:30:22] -rw-r--r-- 2 boinc boinc     15095 Jul 24 09:27 start_atlas.sh
[2025-07-24 11:30:22] -rw------- 1 boinc boinc 281290051 Jul 24 11:29 HITS.pool.root.1
[2025-07-24 11:30:22] -rw------- 1 boinc boinc    983040 Jul 24 11:30 result.tar.gz
11:30:24 (2478962): run_atlas exited; CPU time 21332.401176
11:30:24 (2478962): called boinc_finish(0)

</stderr_txt>
]]>

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