Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
06:02:15 (742229): wrapper (7.7.26015): starting
06:02:15 (742229): wrapper: running run_atlas (--nthreads 4)
[2025-07-27 06:02:15] Arguments: --nthreads 4
[2025-07-27 06:02:15] Threads: 4
[2025-07-27 06:02:15] Checking for CVMFS
[2025-07-27 06:02:15] No cvmfs_config command found, will try listing directly
[2025-07-27 06:02:15] CVMFS is ok
[2025-07-27 06:02:15] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-07-27 06:02:15] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-07-27 06:02:15] Further information can be found at the LHC@home message board.
[2025-07-27 06:02:15] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-27 06:02:15] Checking for apptainer binary...
[2025-07-27 06:02:15] which: no apptainer in ((null))
[2025-07-27 06:02:15] apptainer is not installed, using version from CVMFS
[2025-07-27 06:02:15] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-27 06:02:15] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot36/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut30.grid.cesnet.cz
[2025-07-27 06:02:15] apptainer works
[2025-07-27 06:02:15] Set ATHENA_PROC_NUMBER=4
[2025-07-27 06:02:15] Set ATHENA_CORE_NUMBER=4
[2025-07-27 06:02:15] Starting ATLAS job with PandaID=6741883227
[2025-07-27 06:02:15] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot36/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-27 11:36:36]  *** The last 200 lines of the pilot log: ***
[2025-07-27 11:36:36] 2025-07-27 09:36:23,364 | INFO     | chi2: 1.3858773686214192
[2025-07-27 11:36:36] 2025-07-27 09:36:23,365 | INFO     | sum of square deviations: 10449170802.0
[2025-07-27 11:36:36] 2025-07-27 09:36:23,368 | INFO     | sum of deviations: 56610116822.0
[2025-07-27 11:36:36] 2025-07-27 09:36:23,368 | INFO     | mean x: 1753598792.0
[2025-07-27 11:36:36] 2025-07-27 09:36:23,368 | INFO     | mean y: 2353703.0371517027
[2025-07-27 11:36:36] 2025-07-27 09:36:23,369 | INFO     | -- intersect: -9498058756.010532
[2025-07-27 11:36:36] 2025-07-27 09:36:23,369 | INFO     | intersect: -9498058756.010532
[2025-07-27 11:36:36] 2025-07-27 09:36:23,369 | INFO     | chi2: 1.3862025944888567
[2025-07-27 11:36:36] 2025-07-27 09:36:23,369 | INFO     | current chi2=1.3862025944888567 (change=-0.0234671461415857 %)
[2025-07-27 11:36:36] 2025-07-27 09:36:23,369 | INFO     | right removable region: 322
[2025-07-27 11:36:36] 2025-07-27 09:36:23,370 | INFO     | sum of square deviations: 10449170802.0
[2025-07-27 11:36:36] 2025-07-27 09:36:23,373 | INFO     | sum of deviations: 13321194762.000002
[2025-07-27 11:36:36] 2025-07-27 09:36:23,373 | INFO     | mean x: 1753599097.0
[2025-07-27 11:36:36] 2025-07-27 09:36:23,373 | INFO     | mean y: 2367950.343653251
[2025-07-27 11:36:36] 2025-07-27 09:36:23,373 | INFO     | -- intersect: -2233219499.440703
[2025-07-27 11:36:36] 2025-07-27 09:36:23,373 | INFO     | intersect: -2233219499.440703
[2025-07-27 11:36:36] 2025-07-27 09:36:23,374 | INFO     | chi2: 0.014412182448822404
[2025-07-27 11:36:36] 2025-07-27 09:36:23,374 | INFO     | current chi2=0.014412182448822404 (change=98.96006798471942 %)
[2025-07-27 11:36:36] 2025-07-27 09:36:23,375 | INFO     | sum of square deviations: 9971385099.5
[2025-07-27 11:36:36] 2025-07-27 09:36:23,377 | INFO     | sum of deviations: 15958475777.000002
[2025-07-27 11:36:36] 2025-07-27 09:36:23,378 | INFO     | mean x: 1753599249.5
[2025-07-27 11:36:36] 2025-07-27 09:36:23,378 | INFO     | mean y: 2367100.251572327
[2025-07-27 11:36:36] 2025-07-27 09:36:23,378 | INFO     | -- intersect: -2804140808.776471
[2025-07-27 11:36:36] 2025-07-27 09:36:23,378 | INFO     | intersect: -2804140808.776471
[2025-07-27 11:36:36] 2025-07-27 09:36:23,379 | INFO     | chi2: 0.006071922550925069
[2025-07-27 11:36:36] 2025-07-27 09:36:23,379 | INFO     | current chi2=0.006071922550925069 (change=57.869513708375266 %)
[2025-07-27 11:36:36] 2025-07-27 09:36:23,379 | INFO     | sum of square deviations: 9508390372.0
[2025-07-27 11:36:36] 2025-07-27 09:36:23,382 | INFO     | sum of deviations: 15910126567.000008
[2025-07-27 11:36:36] 2025-07-27 09:36:23,382 | INFO     | mean x: 1753599402.0
[2025-07-27 11:36:36] 2025-07-27 09:36:23,382 | INFO     | mean y: 2367124.2523961663
[2025-07-27 11:36:36] 2025-07-27 09:36:23,382 | INFO     | -- intersect: -2931882243.1057754
[2025-07-27 11:36:36] 2025-07-27 09:36:23,382 | INFO     | intersect: -2931882243.1057754
[2025-07-27 11:36:36] 2025-07-27 09:36:23,383 | INFO     | chi2: 0.001840205025487993
[2025-07-27 11:36:36] 2025-07-27 09:36:23,383 | INFO     | current chi2=0.001840205025487993 (change=69.69320655765554 %)
[2025-07-27 11:36:36] 2025-07-27 09:36:23,384 | INFO     | sum of square deviations: 9059954057.0
[2025-07-27 11:36:36] 2025-07-27 09:36:23,386 | INFO     | sum of deviations: 14162074119.500002
[2025-07-27 11:36:36] 2025-07-27 09:36:23,386 | INFO     | mean x: 1753599554.5
[2025-07-27 11:36:36] 2025-07-27 09:36:23,387 | INFO     | mean y: 2367718.6071428573
[2025-07-27 11:36:36] 2025-07-27 09:36:23,387 | INFO     | -- intersect: -2738772767.3717237
[2025-07-27 11:36:36] 2025-07-27 09:36:23,387 | INFO     | intersect: -2738772767.3717237
[2025-07-27 11:36:36] 2025-07-27 09:36:23,387 | INFO     | chi2: 0.0014179731629815908
[2025-07-27 11:36:36] 2025-07-27 09:36:23,387 | INFO     | current chi2=0.0014179731629815908 (change=22.944827161007943 %)
[2025-07-27 11:36:36] 2025-07-27 09:36:23,388 | INFO     | left removable region: 40
[2025-07-27 11:36:36] 2025-07-27 09:36:23,388 | INFO     | sum of square deviations: 6953769450.5
[2025-07-27 11:36:36] 2025-07-27 09:36:23,391 | INFO     | sum of deviations: 9735470314.000004
[2025-07-27 11:36:36] 2025-07-27 09:36:23,391 | INFO     | mean x: 1753599981.5
[2025-07-27 11:36:36] 2025-07-27 09:36:23,391 | INFO     | mean y: 2368699.368794326
[2025-07-27 11:36:36] 2025-07-27 09:36:23,391 | INFO     | -- intersect: -2452719966.4334145
[2025-07-27 11:36:36] 2025-07-27 09:36:23,391 | INFO     | intersect: -2452719966.4334145
[2025-07-27 11:36:36] 2025-07-27 09:36:23,392 | INFO     | chi2: 0.0011640241128424668
[2025-07-27 11:36:36] 2025-07-27 09:36:23,392 | INFO     | -- intersect: -2452719966.4334145
[2025-07-27 11:36:36] 2025-07-27 09:36:23,392 | INFO     | current memory leak: 1.40 B/s (using 282 data points, chi2=0.00)
[2025-07-27 11:36:36] 2025-07-27 09:36:23,392 | INFO     | could have reported an average CPU frequency of 2438 MHz (15 samples)
[2025-07-27 11:36:36] 2025-07-27 09:36:23,393 | INFO     | ..............................
[2025-07-27 11:36:36] 2025-07-27 09:36:23,393 | INFO     | . Timing measurements:
[2025-07-27 11:36:36] 2025-07-27 09:36:23,393 | INFO     | . get job = 0 s
[2025-07-27 11:36:36] 2025-07-27 09:36:23,393 | INFO     | . initial setup = 1 s
[2025-07-27 11:36:36] 2025-07-27 09:36:23,393 | INFO     | . payload setup = 6 s
[2025-07-27 11:36:36] 2025-07-27 09:36:23,393 | INFO     | . stage-in = 0 s
[2025-07-27 11:36:36] 2025-07-27 09:36:23,393 | INFO     | . payload execution = 20004 s
[2025-07-27 11:36:36] 2025-07-27 09:36:23,394 | INFO     | . stage-out = 1 s
[2025-07-27 11:36:36] 2025-07-27 09:36:23,394 | INFO     | . log creation = 0 s
[2025-07-27 11:36:36] 2025-07-27 09:36:23,394 | INFO     | ..............................
[2025-07-27 11:36:36] 2025-07-27 09:36:23,803 | INFO     | 
[2025-07-27 11:36:36] 2025-07-27 09:36:23,804 | INFO     | job summary report
[2025-07-27 11:36:36] 2025-07-27 09:36:23,804 | INFO     | --------------------------------------------------
[2025-07-27 11:36:36] 2025-07-27 09:36:23,804 | INFO     | PanDA job id: 6741883227
[2025-07-27 11:36:36] 2025-07-27 09:36:23,804 | INFO     | task id: 45697472
[2025-07-27 11:36:36] 2025-07-27 09:36:23,804 | INFO     | errors: (none)
[2025-07-27 11:36:36] 2025-07-27 09:36:23,804 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-27 11:36:36] 2025-07-27 09:36:23,804 | INFO     | pilot state: finished 
[2025-07-27 11:36:36] 2025-07-27 09:36:23,804 | INFO     | transexitcode: 0
[2025-07-27 11:36:36] 2025-07-27 09:36:23,805 | INFO     | exeerrorcode: 0
[2025-07-27 11:36:36] 2025-07-27 09:36:23,805 | INFO     | exeerrordiag: 
[2025-07-27 11:36:36] 2025-07-27 09:36:23,805 | INFO     | exitcode: 0
[2025-07-27 11:36:36] 2025-07-27 09:36:23,805 | INFO     | exitmsg: OK
[2025-07-27 11:36:36] 2025-07-27 09:36:23,805 | INFO     | cpuconsumptiontime: 76492 s
[2025-07-27 11:36:36] 2025-07-27 09:36:23,805 | INFO     | nevents: 400
[2025-07-27 11:36:36] 2025-07-27 09:36:23,805 | INFO     | neventsw: 0
[2025-07-27 11:36:36] 2025-07-27 09:36:23,805 | INFO     | pid: 752587
[2025-07-27 11:36:36] 2025-07-27 09:36:23,806 | INFO     | pgrp: 752587
[2025-07-27 11:36:36] 2025-07-27 09:36:23,806 | INFO     | corecount: 4
[2025-07-27 11:36:36] 2025-07-27 09:36:23,806 | INFO     | event service: False
[2025-07-27 11:36:36] 2025-07-27 09:36:23,806 | INFO     | sizes: {0: 2397384, 1: 2397583, 4: 2397845, 11: 2397873, 20015: 2431238, 20018: 2440258, 20020: 2440442, 20023: 2440636}
[2025-07-27 11:36:36] 2025-07-27 09:36:23,806 | INFO     | --------------------------------------------------
[2025-07-27 11:36:36] 2025-07-27 09:36:23,806 | INFO     | 
[2025-07-27 11:36:36] 2025-07-27 09:36:23,806 | INFO     | executing command: ls -lF /scratch/boinc/var/slot36/slots/0
[2025-07-27 11:36:36] 2025-07-27 09:36:23,823 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-27 11:36:36] 2025-07-27 09:36:23,823 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-27 11:36:36] 2025-07-27 09:36:23,824 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-27 11:36:36] 2025-07-27 09:36:23,824 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-27 11:36:36] 2025-07-27 09:36:23,824 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-27 11:36:36] 2025-07-27 09:36:23,824 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-27 11:36:36] 2025-07-27 09:36:23,824 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-27 11:36:36] 2025-07-27 09:36:23,824 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-27 11:36:36] 2025-07-27 09:36:23,824 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-27 11:36:36] 2025-07-27 09:36:23,824 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-27 11:36:36] 2025-07-27 09:36:23,824 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-27 11:36:36] 2025-07-27 09:36:23,824 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-27 11:36:36] 2025-07-27 09:36:23,825 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-27 11:36:36] 2025-07-27 09:36:23,825 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-27 11:36:36] 2025-07-27 09:36:23,825 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-27 11:36:36] 2025-07-27 09:36:23,825 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-27 11:36:36] 2025-07-27 09:36:23,825 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-27 11:36:36] 2025-07-27 09:36:23,825 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-27 11:36:36] 2025-07-27 09:36:23,825 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-27 11:36:36] 2025-07-27 09:36:23,825 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-27 11:36:36] 2025-07-27 09:36:23,825 | INFO     | job 6741883227 has completed (purged errors)
[2025-07-27 11:36:36] 2025-07-27 09:36:23,826 | INFO     | overall cleanup function is called
[2025-07-27 11:36:36] 2025-07-27 09:36:24,833 | INFO     | --- collectZombieJob: --- 10, [752587]
[2025-07-27 11:36:36] 2025-07-27 09:36:24,834 | INFO     | zombie collector waiting for pid 752587
[2025-07-27 11:36:36] 2025-07-27 09:36:24,834 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-27 11:36:36] 2025-07-27 09:36:24,834 | INFO     | collected zombie processes
[2025-07-27 11:36:36] 2025-07-27 09:36:24,834 | INFO     | will attempt to kill all subprocesses of pid=752587
[2025-07-27 11:36:36] 2025-07-27 09:36:24,981 | INFO     | PID=745833 has CPU usage=13.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-07-27 11:36:36] 2025-07-27 09:36:24,982 | INFO     | .. there are 7 such processes running
[2025-07-27 11:36:36] 2025-07-27 09:36:25,187 | INFO     | process IDs to be killed: [752587] (in reverse order)
[2025-07-27 11:36:36] 2025-07-27 09:36:25,256 | WARNING  | found no corresponding commands to process id(s)
[2025-07-27 11:36:36] 2025-07-27 09:36:25,257 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-27 11:36:36] 2025-07-27 09:36:25,264 | INFO     | did not find any defunct processes belonging to 752587
[2025-07-27 11:36:36] 2025-07-27 09:36:25,270 | INFO     | did not find any defunct processes belonging to 752587
[2025-07-27 11:36:36] 2025-07-27 09:36:25,270 | INFO     | ready for new job
[2025-07-27 11:36:36] 2025-07-27 09:36:25,271 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-27 11:36:36] 2025-07-27 09:36:25,273 | INFO     | ***************************************
[2025-07-27 11:36:36] 2025-07-27 09:36:25,273 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-27 11:36:36] 2025-07-27 09:36:25,273 | INFO     | ***************************************
[2025-07-27 11:36:36] 2025-07-27 09:36:25,273 | INFO     | 
[2025-07-27 11:36:36] 2025-07-27 09:36:25,276 | INFO     | architecture information:
[2025-07-27 11:36:36] 2025-07-27 09:36:25,276 | INFO     | executing command: cat /etc/os-release
[2025-07-27 11:36:36] 2025-07-27 09:36:25,290 | INFO     | cat /etc/os-release:
[2025-07-27 11:36:36] NAME="CentOS Linux"
[2025-07-27 11:36:36] VERSION="7 (Core)"
[2025-07-27 11:36:36] ID="centos"
[2025-07-27 11:36:36] ID_LIKE="rhel fedora"
[2025-07-27 11:36:36] VERSION_ID="7"
[2025-07-27 11:36:36] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-27 11:36:36] ANSI_COLOR="0;31"
[2025-07-27 11:36:36] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-27 11:36:36] HOME_URL="https://www.centos.org/"
[2025-07-27 11:36:36] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-27 11:36:36] 
[2025-07-27 11:36:36] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-27 11:36:36] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-27 11:36:36] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-27 11:36:36] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-27 11:36:36] 
[2025-07-27 11:36:36] 2025-07-27 09:36:25,290 | INFO     | ***************************************
[2025-07-27 11:36:36] 2025-07-27 09:36:25,793 | INFO     | executing command: df -mP /scratch/boinc/var/slot36/slots/0
[2025-07-27 11:36:36] 2025-07-27 09:36:25,808 | INFO     | sufficient remaining disk space (1662751080448 B)
[2025-07-27 11:36:36] 2025-07-27 09:36:25,808 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-27 11:36:36] 2025-07-27 09:36:25,809 | INFO     | current server update state: UPDATING_FINAL
[2025-07-27 11:36:36] 2025-07-27 09:36:25,809 | INFO     | update_server=False
[2025-07-27 11:36:36] 2025-07-27 09:36:25,809 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-27 11:36:36] 2025-07-27 09:36:25,809 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-07-27 11:36:36] 2025-07-27 09:36:25,810 | INFO     | found 0 job(s) in 20 queues
[2025-07-27 11:36:36] 2025-07-27 09:36:25,810 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-27 11:36:36] 2025-07-27 09:36:25,810 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-27 11:36:36] 2025-07-27 09:36:25,972 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-27 11:36:36] 2025-07-27 09:36:26,113 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-07-27 11:36:36] 2025-07-27 09:36:26,114 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-07-27 11:36:36] 2025-07-27 09:36:26,114 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-27 11:36:36] 2025-07-27 09:36:26,114 | INFO     | will abort loop
[2025-07-27 11:36:36] 2025-07-27 09:36:26,147 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-27 11:36:36] 2025-07-27 09:36:26,479 | INFO     | all data control threads have been joined
[2025-07-27 11:36:36] 2025-07-27 09:36:26,655 | INFO     | all payload control threads have been joined
[2025-07-27 11:36:36] 2025-07-27 09:36:26,814 | INFO     | [job] retrieve thread has finished
[2025-07-27 11:36:36] 2025-07-27 09:36:26,874 | INFO     | all job control threads have been joined
[2025-07-27 11:36:36] 2025-07-27 09:36:27,119 | INFO     | [job] job monitor thread has finished
[2025-07-27 11:36:36] 2025-07-27 09:36:27,217 | INFO     | [payload] validate_post thread has finished
[2025-07-27 11:36:36] 2025-07-27 09:36:27,296 | INFO     | [job] validate thread has finished
[2025-07-27 11:36:36] 2025-07-27 09:36:27,311 | INFO     | [payload] validate_pre thread has finished
[2025-07-27 11:36:36] 2025-07-27 09:36:27,484 | INFO     | [data] control thread has finished
[2025-07-27 11:36:36] 2025-07-27 09:36:27,660 | INFO     | [payload] control thread has finished
[2025-07-27 11:36:36] 2025-07-27 09:36:27,804 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-27 11:36:36] 2025-07-27 09:36:27,818 | INFO     | [data] copytool_in thread has finished
[2025-07-27 11:36:36] 2025-07-27 09:36:27,880 | INFO     | [job] control thread has finished
[2025-07-27 11:36:36] 2025-07-27 09:36:27,900 | INFO     | [payload] execute_payloads thread has finished
[2025-07-27 11:36:36] 2025-07-27 09:36:27,978 | INFO     | [data] copytool_out thread has finished
[2025-07-27 11:36:36] 2025-07-27 09:36:27,994 | INFO     | [job] create_data_payload thread has finished
[2025-07-27 11:36:36] 2025-07-27 09:36:28,287 | INFO     | [payload] failed_post thread has finished
[2025-07-27 11:36:36] 2025-07-27 09:36:28,517 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-27 11:36:36] 2025-07-27 09:36:29,522 | INFO     | [job] queue monitor thread has finished
[2025-07-27 11:36:36] 2025-07-27 09:36:30,153 | INFO     | [data] queue_monitor thread has finished
[2025-07-27 11:36:36] 2025-07-27 09:36:30,898 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22444903843648)>', '<ExcThread(monitor, started 22444664387328)>']
[2025-07-27 11:36:36] 2025-07-27 09:36:31,837 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-27 11:36:36] 2025-07-27 09:36:31,837 | INFO     | [monitor] control thread has ended
[2025-07-27 11:36:36] 2025-07-27 09:36:35,923 | INFO     | all workflow threads have been joined
[2025-07-27 11:36:36] 2025-07-27 09:36:35,923 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-27 11:36:36] 2025-07-27 09:36:35,923 | INFO     | traces error code: 0
[2025-07-27 11:36:36] 2025-07-27 09:36:35,924 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-27 11:36:36] 2025-07-27 09:36:36,048 [wrapper] ==== pilot stdout END ====
[2025-07-27 11:36:36] 2025-07-27 09:36:36,051 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-27 11:36:36] 2025-07-27 09:36:36,054 [wrapper] pilotpid: 745833
[2025-07-27 11:36:36] 2025-07-27 09:36:36,056 [wrapper] Pilot exit status: 0
[2025-07-27 11:36:36] 2025-07-27 09:36:36,066 [wrapper] pandaids: 6741883227
[2025-07-27 11:36:36] 2025-07-27 09:36:36,114 [wrapper] cleanup supervisor_pilot 1202014 745834
[2025-07-27 11:36:36] 2025-07-27 09:36:36,117 [wrapper] Test setup, not cleaning
[2025-07-27 11:36:36] 2025-07-27 09:36:36,120 [wrapper] apfmon messages muted
[2025-07-27 11:36:36] 2025-07-27 09:36:36,123 [wrapper] ==== wrapper stdout END ====
[2025-07-27 11:36:36] 2025-07-27 09:36:36,125 [wrapper] ==== wrapper stderr END ====
[2025-07-27 11:36:36]  *** Error codes and diagnostics ***
[2025-07-27 11:36:36]     "exeErrorCode": 0,
[2025-07-27 11:36:36]     "exeErrorDiag": "",
[2025-07-27 11:36:36]     "pilotErrorCode": 0,
[2025-07-27 11:36:36]     "pilotErrorDiag": "",
[2025-07-27 11:36:36]  *** Listing of results directory ***
[2025-07-27 11:36:36] total 596984
[2025-07-27 11:36:36] -rw-r--r-- 1 boinc boinc    530466 Jul 23 08:47 pilot3.tar.gz
[2025-07-27 11:36:36] -rw-r--r-- 1 boinc boinc      5112 Jul 23 08:55 queuedata.json
[2025-07-27 11:36:36] -rwx------ 1 boinc boinc     36292 Jul 23 08:56 runpilot2-wrapper.sh
[2025-07-27 11:36:36] -rw-r--r-- 1 boinc boinc       100 Jul 27 06:02 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-27 11:36:36] -rwxr-xr-x 1 boinc boinc      7986 Jul 27 06:02 run_atlas
[2025-07-27 11:36:36] -rw-r--r-- 1 boinc boinc       105 Jul 27 06:02 job.xml
[2025-07-27 11:36:36] -rw-r--r-- 1 boinc boinc      6422 Jul 27 06:02 init_data.xml
[2025-07-27 11:36:36] -rw-r--r-- 2 boinc boinc 328052202 Jul 27 06:02 EVNT.45697470._000170.pool.root.1
[2025-07-27 11:36:36] drwxrwx--x 2 boinc boinc      4096 Jul 27 06:02 shared
[2025-07-27 11:36:36] -rw-r--r-- 2 boinc boinc    542903 Jul 27 06:02 input.tar.gz
[2025-07-27 11:36:36] -rw-r--r-- 2 boinc boinc     15095 Jul 27 06:02 start_atlas.sh
[2025-07-27 11:36:36] -rw-r--r-- 1 boinc boinc         0 Jul 27 06:02 boinc_lockfile
[2025-07-27 11:36:36] -rw-r--r-- 1 boinc boinc      2611 Jul 27 06:02 pandaJob.out
[2025-07-27 11:36:36] -rw------- 1 boinc boinc    980125 Jul 27 06:02 agis_schedconf.cvmfs.json
[2025-07-27 11:36:36] drwx------ 4 boinc boinc      4096 Jul 27 06:02 pilot3
[2025-07-27 11:36:36] -rw------- 1 boinc boinc 274892145 Jul 27 11:35 HITS.45697472._003667.pool.root.1
[2025-07-27 11:36:36] -rw-r--r-- 1 boinc boinc       530 Jul 27 11:35 boinc_task_state.xml
[2025-07-27 11:36:36] -rw------- 1 boinc boinc      1038 Jul 27 11:36 memory_monitor_summary.json
[2025-07-27 11:36:36] -rw------- 1 boinc boinc   1593052 Jul 27 11:36 agis_ddmendpoints.agis.ALL.json
[2025-07-27 11:36:36] -rw------- 1 boinc boinc    395984 Jul 27 11:36 log.45697472._003667.job.log.tgz.1
[2025-07-27 11:36:36] -rw------- 1 boinc boinc      7825 Jul 27 11:36 heartbeat.json
[2025-07-27 11:36:36] -rw------- 1 boinc boinc        95 Jul 27 11:36 pilot_heartbeat.json
[2025-07-27 11:36:36] -rw-r--r-- 1 boinc boinc      8192 Jul 27 11:36 boinc_mmap_file
[2025-07-27 11:36:36] -rw-r--r-- 1 boinc boinc        28 Jul 27 11:36 wrapper_checkpoint.txt
[2025-07-27 11:36:36] -rw------- 1 boinc boinc      4677 Jul 27 11:36 pilotlog.txt
[2025-07-27 11:36:36] -rw------- 1 boinc boinc   1848374 Jul 27 11:36 log.45697472._003667.job.log.1
[2025-07-27 11:36:36] -rw------- 1 boinc boinc       357 Jul 27 11:36 output.list
[2025-07-27 11:36:36] -rw-r--r-- 1 boinc boinc       620 Jul 27 11:36 runtime_log
[2025-07-27 11:36:36] -rw------- 1 boinc boinc   2263040 Jul 27 11:36 result.tar.gz
[2025-07-27 11:36:36] -rw-r--r-- 1 boinc boinc      9027 Jul 27 11:36 runtime_log.err
[2025-07-27 11:36:36] -rw------- 1 boinc boinc       667 Jul 27 11:36 oL9KDmFaiy7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmo8KLDmpkPfon.diag
[2025-07-27 11:36:36] -rw-r--r-- 1 boinc boinc     20805 Jul 27 11:36 stderr.txt
[2025-07-27 11:36:36] HITS file was successfully produced:
[2025-07-27 11:36:36] -rw------- 1 boinc boinc 274892145 Jul 27 11:35 shared/HITS.pool.root.1
[2025-07-27 11:36:36]  *** Contents of shared directory: ***
[2025-07-27 11:36:36] total 591580
[2025-07-27 11:36:36] -rw-r--r-- 2 boinc boinc 328052202 Jul 27 06:02 ATLAS.root_0
[2025-07-27 11:36:36] -rw-r--r-- 2 boinc boinc    542903 Jul 27 06:02 input.tar.gz
[2025-07-27 11:36:36] -rw-r--r-- 2 boinc boinc     15095 Jul 27 06:02 start_atlas.sh
[2025-07-27 11:36:36] -rw------- 1 boinc boinc 274892145 Jul 27 11:35 HITS.pool.root.1
[2025-07-27 11:36:36] -rw------- 1 boinc boinc   2263040 Jul 27 11:36 result.tar.gz
11:36:37 (742229): run_atlas exited; CPU time 77328.206125
11:36:37 (742229): called boinc_finish(0)

</stderr_txt>
]]>

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