Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
10:06:47 (1185787): wrapper (7.7.26015): starting
10:06:47 (1185787): wrapper: running run_atlas (--nthreads 8)
[2025-07-23 10:06:47] Arguments: --nthreads 8
[2025-07-23 10:06:47] Threads: 8
[2025-07-23 10:06:47] Checking for CVMFS
[2025-07-23 10:06:47] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-23 10:06:47] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-23 10:06:47] Running cvmfs_config stat atlas.cern.ch
[2025-07-23 10:06:49] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-23 10:06:49] 2.13.0.0 558603 12721 334488 148660 2 337 17792141 32935936 29458 16776704 0 37628488 99.417 79644755 20513 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-07-23 10:06:49] CVMFS is ok
[2025-07-23 10:06:49] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-07-23 10:06:49] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-07-23 10:06:49] Further information can be found at the LHC@home message board.
[2025-07-23 10:06:49] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-23 10:06:49] Checking for apptainer binary...
[2025-07-23 10:06:49] Using apptainer found in PATH at /usr/bin/apptainer
[2025-07-23 10:06:49] Running /usr/bin/apptainer --version
[2025-07-23 10:06:49] apptainer version 1.4.1-1.el9
[2025-07-23 10:06:49] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-23 10:06:50] c6-6-8-3.aglt2.org
[2025-07-23 10:06:50] apptainer works
[2025-07-23 10:06:50] Set ATHENA_PROC_NUMBER=8
[2025-07-23 10:06:50] Set ATHENA_CORE_NUMBER=8
[2025-07-23 10:06:50] Starting ATLAS job with PandaID=6741882920
[2025-07-23 10:06:50] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-23 17:20:36]  *** The last 200 lines of the pilot log: ***
[2025-07-23 17:20:36] 2025-07-23 21:20:01,842 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-23 17:20:36] 2025-07-23 21:20:01,842 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-23 17:20:36] 2025-07-23 21:20:01,850 | INFO     | fitting pss+swap vs Time
[2025-07-23 17:20:36] 2025-07-23 21:20:01,851 | INFO     | sum of square deviations: 23302653449.57575
[2025-07-23 17:20:36] 2025-07-23 21:20:01,856 | INFO     | sum of deviations: 63204478847.28668
[2025-07-23 17:20:36] 2025-07-23 21:20:01,857 | INFO     | mean x: 1753292686.6184833
[2025-07-23 17:20:36] 2025-07-23 21:20:01,857 | INFO     | mean y: 2165477.604265403
[2025-07-23 17:20:36] 2025-07-23 21:20:01,857 | INFO     | -- intersect: -4753342334.597177
[2025-07-23 17:20:36] 2025-07-23 21:20:01,857 | INFO     | intersect: -4753342334.597177
[2025-07-23 17:20:36] 2025-07-23 21:20:01,858 | INFO     | chi2: 2.6897069084843466
[2025-07-23 17:20:36] 2025-07-23 21:20:01,859 | INFO     | sum of square deviations: 22484132422.00483
[2025-07-23 17:20:36] 2025-07-23 21:20:01,864 | INFO     | sum of deviations: 65841163214.978455
[2025-07-23 17:20:36] 2025-07-23 21:20:01,864 | INFO     | mean x: 1753292534.119904
[2025-07-23 17:20:36] 2025-07-23 21:20:01,864 | INFO     | mean y: 2165961.4604316545
[2025-07-23 17:20:36] 2025-07-23 21:20:01,864 | INFO     | -- intersect: -5132069050.854912
[2025-07-23 17:20:36] 2025-07-23 21:20:01,865 | INFO     | intersect: -5132069050.854912
[2025-07-23 17:20:36] 2025-07-23 21:20:01,865 | INFO     | chi2: 2.6757549150208693
[2025-07-23 17:20:36] 2025-07-23 21:20:01,865 | INFO     | current chi2=2.6757549150208693 (change=0.5187179844565025 %)
[2025-07-23 17:20:36] 2025-07-23 21:20:01,865 | INFO     | right removable region: 416
[2025-07-23 17:20:36] 2025-07-23 21:20:01,866 | INFO     | sum of square deviations: 22484101922.00482
[2025-07-23 17:20:36] 2025-07-23 21:20:01,871 | INFO     | sum of deviations: -15863508788.48922
[2025-07-23 17:20:36] 2025-07-23 21:20:01,872 | INFO     | mean x: 1753292839.119904
[2025-07-23 17:20:36] 2025-07-23 21:20:01,872 | INFO     | mean y: 2180167.7697841725
[2025-07-23 17:20:36] 2025-07-23 21:20:01,872 | INFO     | -- intersect: 1239204286.3516927
[2025-07-23 17:20:36] 2025-07-23 21:20:01,872 | INFO     | intersect: 1239204286.3516927
[2025-07-23 17:20:36] 2025-07-23 21:20:01,873 | INFO     | chi2: 0.7154229401083665
[2025-07-23 17:20:36] 2025-07-23 21:20:01,873 | INFO     | current chi2=0.7154229401083665 (change=73.4014535988418 %)
[2025-07-23 17:20:36] 2025-07-23 21:20:01,874 | INFO     | sum of square deviations: 21684971421.172348
[2025-07-23 17:20:36] 2025-07-23 21:20:01,879 | INFO     | sum of deviations: -49289232934.708755
[2025-07-23 17:20:36] 2025-07-23 21:20:01,879 | INFO     | mean x: 1753292991.618932
[2025-07-23 17:20:36] 2025-07-23 21:20:01,879 | INFO     | mean y: 2186540.1165048545
[2025-07-23 17:20:36] 2025-07-23 21:20:01,879 | INFO     | -- intersect: 3987364338.521271
[2025-07-23 17:20:36] 2025-07-23 21:20:01,880 | INFO     | intersect: 3987364338.521271
[2025-07-23 17:20:36] 2025-07-23 21:20:01,880 | INFO     | chi2: 0.3630061654625456
[2025-07-23 17:20:36] 2025-07-23 21:20:01,880 | INFO     | current chi2=0.3630061654625456 (change=49.25992093466274 %)
[2025-07-23 17:20:36] 2025-07-23 21:20:01,881 | INFO     | sum of square deviations: 20904979061.100796
[2025-07-23 17:20:36] 2025-07-23 21:20:01,886 | INFO     | sum of deviations: -59047037959.85503
[2025-07-23 17:20:36] 2025-07-23 21:20:01,886 | INFO     | mean x: 1753293144.120393
[2025-07-23 17:20:36] 2025-07-23 21:20:01,886 | INFO     | mean y: 2188438.343980344
[2025-07-23 17:20:36] 2025-07-23 21:20:01,886 | INFO     | -- intersect: 4954442469.933477
[2025-07-23 17:20:36] 2025-07-23 21:20:01,887 | INFO     | intersect: 4954442469.933477
[2025-07-23 17:20:36] 2025-07-23 21:20:01,894 | INFO     | chi2: 0.31192678314156463
[2025-07-23 17:20:36] 2025-07-23 21:20:01,895 | INFO     | current chi2=0.31192678314156463 (change=14.071216188820149 %)
[2025-07-23 17:20:36] 2025-07-23 21:20:01,895 | INFO     | left removable region: 30
[2025-07-23 17:20:36] 2025-07-23 21:20:01,895 | INFO     | sum of square deviations: 17833204095.70983
[2025-07-23 17:20:36] 2025-07-23 21:20:01,899 | INFO     | sum of deviations: -41978592164.40412
[2025-07-23 17:20:36] 2025-07-23 21:20:01,899 | INFO     | mean x: 1753293418.611399
[2025-07-23 17:20:36] 2025-07-23 21:20:01,899 | INFO     | mean y: 2186311.6373056993
[2025-07-23 17:20:36] 2025-07-23 21:20:01,899 | INFO     | -- intersect: 4129363288.3269897
[2025-07-23 17:20:36] 2025-07-23 21:20:01,899 | INFO     | intersect: 4129363288.3269897
[2025-07-23 17:20:36] 2025-07-23 21:20:01,900 | INFO     | chi2: 0.2864220552538421
[2025-07-23 17:20:36] 2025-07-23 21:20:01,900 | INFO     | -- intersect: 4129363288.3269897
[2025-07-23 17:20:36] 2025-07-23 21:20:01,900 | INFO     | current memory leak: -2.35 B/s (using 386 data points, chi2=0.29)
[2025-07-23 17:20:36] 2025-07-23 21:20:01,901 | INFO     | could have reported an average CPU frequency of 2544 MHz (18 samples)
[2025-07-23 17:20:36] 2025-07-23 21:20:01,901 | INFO     | ..............................
[2025-07-23 17:20:36] 2025-07-23 21:20:01,902 | INFO     | . Timing measurements:
[2025-07-23 17:20:36] 2025-07-23 21:20:01,902 | INFO     | . get job = 0 s
[2025-07-23 17:20:36] 2025-07-23 21:20:01,902 | INFO     | . initial setup = 6 s
[2025-07-23 17:20:36] 2025-07-23 21:20:01,902 | INFO     | . payload setup = 48 s
[2025-07-23 17:20:36] 2025-07-23 21:20:01,902 | INFO     | . stage-in = 0 s
[2025-07-23 17:20:36] 2025-07-23 21:20:01,902 | INFO     | . payload execution = 25769 s
[2025-07-23 17:20:36] 2025-07-23 21:20:01,902 | INFO     | . stage-out = 3 s
[2025-07-23 17:20:36] 2025-07-23 21:20:01,902 | INFO     | . log creation = 0 s
[2025-07-23 17:20:36] 2025-07-23 21:20:01,902 | INFO     | ..............................
[2025-07-23 17:20:36] 2025-07-23 21:20:02,434 | INFO     | 
[2025-07-23 17:20:36] 2025-07-23 21:20:02,434 | INFO     | job summary report
[2025-07-23 17:20:36] 2025-07-23 21:20:02,434 | INFO     | --------------------------------------------------
[2025-07-23 17:20:36] 2025-07-23 21:20:02,434 | INFO     | PanDA job id: 6741882920
[2025-07-23 17:20:36] 2025-07-23 21:20:02,434 | INFO     | task id: 45697472
[2025-07-23 17:20:36] 2025-07-23 21:20:02,434 | INFO     | errors: (none)
[2025-07-23 17:20:36] 2025-07-23 21:20:02,435 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-23 17:20:36] 2025-07-23 21:20:02,435 | INFO     | pilot state: finished 
[2025-07-23 17:20:36] 2025-07-23 21:20:02,435 | INFO     | transexitcode: 0
[2025-07-23 17:20:36] 2025-07-23 21:20:02,435 | INFO     | exeerrorcode: 0
[2025-07-23 17:20:36] 2025-07-23 21:20:02,435 | INFO     | exeerrordiag: 
[2025-07-23 17:20:36] 2025-07-23 21:20:02,435 | INFO     | exitcode: 0
[2025-07-23 17:20:36] 2025-07-23 21:20:02,435 | INFO     | exitmsg: OK
[2025-07-23 17:20:36] 2025-07-23 21:20:02,435 | INFO     | cpuconsumptiontime: 73212 s
[2025-07-23 17:20:36] 2025-07-23 21:20:02,435 | INFO     | nevents: 400
[2025-07-23 17:20:36] 2025-07-23 21:20:02,435 | INFO     | neventsw: 0
[2025-07-23 17:20:36] 2025-07-23 21:20:02,435 | INFO     | pid: 1199016
[2025-07-23 17:20:36] 2025-07-23 21:20:02,435 | INFO     | pgrp: 1199016
[2025-07-23 17:20:36] 2025-07-23 21:20:02,436 | INFO     | corecount: 8
[2025-07-23 17:20:36] 2025-07-23 21:20:02,436 | INFO     | event service: False
[2025-07-23 17:20:36] 2025-07-23 21:20:02,436 | INFO     | sizes: {0: 2396706, 1: 2397391, 2: 2397391, 3: 2397618, 4: 2397618, 16: 2397646, 27: 2397802, 38: 2397830, 40: 2398120, 50: 2398148, 25822: 2434263, 25823: 2434542
[2025-07-23 17:20:36] 2025-07-23 21:20:02,436 | INFO     | --------------------------------------------------
[2025-07-23 17:20:36] 2025-07-23 21:20:02,436 | INFO     | 
[2025-07-23 17:20:36] 2025-07-23 21:20:02,436 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-07-23 17:20:36] 2025-07-23 21:20:02,510 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-23 17:20:36] 2025-07-23 21:20:02,510 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-23 17:20:36] 2025-07-23 21:20:02,510 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-23 17:20:36] 2025-07-23 21:20:02,510 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-23 17:20:36] 2025-07-23 21:20:02,510 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-23 17:20:36] 2025-07-23 21:20:02,511 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-23 17:20:36] 2025-07-23 21:20:02,511 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-23 17:20:36] 2025-07-23 21:20:02,511 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-23 17:20:36] 2025-07-23 21:20:02,511 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-23 17:20:36] 2025-07-23 21:20:02,511 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-23 17:20:36] 2025-07-23 21:20:02,511 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-23 17:20:36] 2025-07-23 21:20:02,511 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-23 17:20:36] 2025-07-23 21:20:02,511 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-23 17:20:36] 2025-07-23 21:20:02,511 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-23 17:20:36] 2025-07-23 21:20:02,511 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-23 17:20:36] 2025-07-23 21:20:02,511 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-23 17:20:36] 2025-07-23 21:20:02,511 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-23 17:20:36] 2025-07-23 21:20:02,512 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-23 17:20:36] 2025-07-23 21:20:02,512 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-23 17:20:36] 2025-07-23 21:20:02,512 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-23 17:20:36] 2025-07-23 21:20:02,512 | INFO     | job 6741882920 has completed (purged errors)
[2025-07-23 17:20:36] 2025-07-23 21:20:02,512 | INFO     | overall cleanup function is called
[2025-07-23 17:20:36] 2025-07-23 21:20:03,541 | INFO     | --- collectZombieJob: --- 10, [1199016]
[2025-07-23 17:20:36] 2025-07-23 21:20:03,541 | INFO     | zombie collector waiting for pid 1199016
[2025-07-23 17:20:36] 2025-07-23 21:20:03,541 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-23 17:20:36] 2025-07-23 21:20:03,541 | INFO     | collected zombie processes
[2025-07-23 17:20:36] 2025-07-23 21:20:03,541 | INFO     | will attempt to kill all subprocesses of pid=1199016
[2025-07-23 17:20:36] 2025-07-23 21:20:04,153 | INFO     | process IDs to be killed: [1199016] (in reverse order)
[2025-07-23 17:20:36] 2025-07-23 21:20:04,324 | WARNING  | found no corresponding commands to process id(s)
[2025-07-23 17:20:36] 2025-07-23 21:20:04,327 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-23 17:20:36] 2025-07-23 21:20:04,346 | INFO     | did not find any defunct processes belonging to 1199016
[2025-07-23 17:20:36] 2025-07-23 21:20:04,364 | INFO     | did not find any defunct processes belonging to 1199016
[2025-07-23 17:20:36] 2025-07-23 21:20:04,365 | INFO     | ready for new job
[2025-07-23 17:20:36] 2025-07-23 21:20:04,365 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-23 17:20:36] 2025-07-23 21:20:04,381 | INFO     | ***************************************
[2025-07-23 17:20:36] 2025-07-23 21:20:04,381 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-23 17:20:36] 2025-07-23 21:20:04,381 | INFO     | ***************************************
[2025-07-23 17:20:36] 2025-07-23 21:20:04,382 | INFO     | 
[2025-07-23 17:20:36] 2025-07-23 21:20:04,394 | INFO     | architecture information:
[2025-07-23 17:20:36] 2025-07-23 21:20:04,395 | INFO     | executing command: cat /etc/os-release
[2025-07-23 17:20:36] 2025-07-23 21:20:04,415 | INFO     | cat /etc/os-release:
[2025-07-23 17:20:36] NAME="CentOS Linux"
[2025-07-23 17:20:36] VERSION="7 (Core)"
[2025-07-23 17:20:36] ID="centos"
[2025-07-23 17:20:36] ID_LIKE="rhel fedora"
[2025-07-23 17:20:36] VERSION_ID="7"
[2025-07-23 17:20:36] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-23 17:20:36] ANSI_COLOR="0;31"
[2025-07-23 17:20:36] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-23 17:20:36] HOME_URL="https://www.centos.org/"
[2025-07-23 17:20:36] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-23 17:20:36] 
[2025-07-23 17:20:36] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-23 17:20:36] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-23 17:20:36] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-23 17:20:36] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-23 17:20:36] 
[2025-07-23 17:20:36] 2025-07-23 21:20:04,415 | INFO     | ***************************************
[2025-07-23 17:20:36] 2025-07-23 21:20:04,920 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-07-23 17:20:36] 2025-07-23 21:20:04,944 | INFO     | sufficient remaining disk space (94515494912 B)
[2025-07-23 17:20:36] 2025-07-23 21:20:04,944 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-23 17:20:36] 2025-07-23 21:20:04,944 | INFO     | current server update state: UPDATING_FINAL
[2025-07-23 17:20:36] 2025-07-23 21:20:04,944 | INFO     | update_server=False
[2025-07-23 17:20:36] 2025-07-23 21:20:04,944 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-23 17:20:36] 2025-07-23 21:20:05,255 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-07-23 17:20:36] 2025-07-23 21:20:05,255 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-07-23 17:20:36] 2025-07-23 21:20:05,255 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-23 17:20:36] 2025-07-23 21:20:05,255 | INFO     | will abort loop
[2025-07-23 17:20:36] 2025-07-23 21:20:05,336 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-23 17:20:36] 2025-07-23 21:20:05,360 | INFO     | all data control threads have been joined
[2025-07-23 17:20:36] 2025-07-23 21:20:05,391 | INFO     | all payload control threads have been joined
[2025-07-23 17:20:36] 2025-07-23 21:20:05,953 | INFO     | [job] retrieve thread has finished
[2025-07-23 17:20:36] 2025-07-23 21:20:06,261 | INFO     | [job] job monitor thread has finished
[2025-07-23 17:20:36] 2025-07-23 21:20:06,367 | INFO     | [data] control thread has finished
[2025-07-23 17:20:36] 2025-07-23 21:20:06,397 | INFO     | [payload] control thread has finished
[2025-07-23 17:20:36] 2025-07-23 21:20:06,549 | INFO     | [job] validate thread has finished
[2025-07-23 17:20:36] 2025-07-23 21:20:06,584 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-23 17:20:36] 2025-07-23 21:20:06,664 | INFO     | all job control threads have been joined
[2025-07-23 17:20:36] 2025-07-23 21:20:06,685 | INFO     | [job] create_data_payload thread has finished
[2025-07-23 17:20:36] 2025-07-23 21:20:06,700 | INFO     | [payload] validate_pre thread has finished
[2025-07-23 17:20:36] 2025-07-23 21:20:06,970 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-23 17:20:36] 2025-07-23 21:20:07,100 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-23 17:20:36] 2025-07-23 21:20:07,123 | INFO     | [data] copytool_in thread has finished
[2025-07-23 17:20:36] 2025-07-23 21:20:07,140 | INFO     | [payload] execute_payloads thread has finished
[2025-07-23 17:20:36] 2025-07-23 21:20:07,343 | INFO     | [data] copytool_out thread has finished
[2025-07-23 17:20:36] 2025-07-23 21:20:07,409 | INFO     | [payload] failed_post thread has finished
[2025-07-23 17:20:36] 2025-07-23 21:20:07,507 | INFO     | [payload] validate_post thread has finished
[2025-07-23 17:20:36] 2025-07-23 21:20:07,670 | INFO     | [job] control thread has finished
[2025-07-23 17:20:36] 2025-07-23 21:20:08,109 | INFO     | [job] queue monitor thread has finished
[2025-07-23 17:20:36] 2025-07-23 21:20:10,593 | INFO     | [data] queue_monitor thread has finished
[2025-07-23 17:20:36] 2025-07-23 21:20:12,294 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139894172739392)>', '<ExcThread(monitor, started 139893376276224)>']
[2025-07-23 17:20:36] 2025-07-23 21:20:17,319 | INFO     | all workflow threads have been joined
[2025-07-23 17:20:36] 2025-07-23 21:20:17,319 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-23 17:20:36] 2025-07-23 21:20:17,319 | INFO     | traces error code: 0
[2025-07-23 17:20:36] 2025-07-23 21:20:17,320 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-23 17:20:36] 2025-07-23 21:20:35,211 | INFO     | PID=1190056 has CPU usage=3.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-07-23 17:20:36] 2025-07-23 21:20:35,211 | INFO     | .. there are 28 such processes running
[2025-07-23 17:20:36] 2025-07-23 21:20:35,212 | INFO     | found 0 job(s) in 20 queues
[2025-07-23 17:20:36] 2025-07-23 21:20:35,212 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-23 17:20:36] 2025-07-23 21:20:35,212 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-23 17:20:36] 2025-07-23 21:20:35,213 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-23 17:20:36] 2025-07-23 21:20:35,213 | INFO     | [monitor] control thread has ended
[2025-07-23 17:20:36] 2025-07-23 21:20:35,456 [wrapper] ==== pilot stdout END ====
[2025-07-23 17:20:36] 2025-07-23 21:20:35,477 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-23 17:20:36] 2025-07-23 21:20:35,483 [wrapper] pilotpid: 1190056
[2025-07-23 17:20:36] 2025-07-23 21:20:35,492 [wrapper] Pilot exit status: 0
[2025-07-23 17:20:36] 2025-07-23 21:20:35,560 [wrapper] pandaids: 6741882920
[2025-07-23 17:20:36] 2025-07-23 21:20:35,711 [wrapper] cleanup supervisor_pilot 2575621 1190057
[2025-07-23 17:20:36] 2025-07-23 21:20:35,723 [wrapper] Test setup, not cleaning
[2025-07-23 17:20:36] 2025-07-23 21:20:35,732 [wrapper] apfmon messages muted
[2025-07-23 17:20:36] 2025-07-23 21:20:35,741 [wrapper] ==== wrapper stdout END ====
[2025-07-23 17:20:36] 2025-07-23 21:20:35,760 [wrapper] ==== wrapper stderr END ====
[2025-07-23 17:20:36]  *** Error codes and diagnostics ***
[2025-07-23 17:20:36]     "exeErrorCode": 0,
[2025-07-23 17:20:36]     "exeErrorDiag": "",
[2025-07-23 17:20:36]     "pilotErrorCode": 0,
[2025-07-23 17:20:36]     "pilotErrorDiag": "",
[2025-07-23 17:20:36]  *** Listing of results directory ***
[2025-07-23 17:20:36] total 610908
[2025-07-23 17:20:36] -rw-r--r--. 1 boincer umatlas    530466 Jul 23 02:14 pilot3.tar.gz
[2025-07-23 17:20:36] -rwx------. 1 boincer umatlas     36292 Jul 23 02:35 runpilot2-wrapper.sh
[2025-07-23 17:20:36] -rw-r--r--. 1 boincer umatlas      5112 Jul 23 02:35 queuedata.json
[2025-07-23 17:20:36] -rw-r--r--. 1 boincer umatlas       100 Jul 23 10:06 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-23 17:20:36] -rwxr-xr-x. 1 boincer umatlas      7986 Jul 23 10:06 run_atlas
[2025-07-23 17:20:36] -rw-r--r--. 1 boincer umatlas       105 Jul 23 10:06 job.xml
[2025-07-23 17:20:36] -rw-r--r--. 2 boincer umatlas 334359902 Jul 23 10:06 EVNT.45697470._000158.pool.root.1
[2025-07-23 17:20:36] -rw-r--r--. 2 boincer umatlas     15095 Jul 23 10:06 start_atlas.sh
[2025-07-23 17:20:36] drwxrwx--x. 2 boincer umatlas      4096 Jul 23 10:06 shared
[2025-07-23 17:20:36] -rw-r--r--. 2 boincer umatlas    542900 Jul 23 10:06 input.tar.gz
[2025-07-23 17:20:36] -rw-r--r--. 1 boincer umatlas         0 Jul 23 10:06 boinc_lockfile
[2025-07-23 17:20:36] -rw-r--r--. 1 boincer umatlas      2612 Jul 23 10:06 pandaJob.out
[2025-07-23 17:20:36] -rw-------. 1 boincer umatlas    978503 Jul 23 10:07 agis_schedconf.cvmfs.json
[2025-07-23 17:20:36] drwx------. 4 boincer umatlas      4096 Jul 23 10:07 pilot3
[2025-07-23 17:20:36] -rw-r--r--. 1 boincer umatlas      6855 Jul 23 17:09 init_data.xml
[2025-07-23 17:20:36] -rw-------. 1 boincer umatlas 282094411 Jul 23 17:18 HITS.45697472._003361.pool.root.1
[2025-07-23 17:20:36] -rw-r--r--. 1 boincer umatlas       531 Jul 23 17:19 boinc_task_state.xml
[2025-07-23 17:20:36] -rw-------. 1 boincer umatlas      1047 Jul 23 17:19 memory_monitor_summary.json
[2025-07-23 17:20:36] -rw-------. 1 boincer umatlas   1593041 Jul 23 17:19 agis_ddmendpoints.agis.ALL.json
[2025-07-23 17:20:36] -rw-------. 1 boincer umatlas    496239 Jul 23 17:19 log.45697472._003361.job.log.tgz.1
[2025-07-23 17:20:36] -rw-------. 1 boincer umatlas      7829 Jul 23 17:20 heartbeat.json
[2025-07-23 17:20:36] -rw-r--r--. 1 boincer umatlas      8192 Jul 23 17:20 boinc_mmap_file
[2025-07-23 17:20:36] -rw-r--r--. 1 boincer umatlas        28 Jul 23 17:20 wrapper_checkpoint.txt
[2025-07-23 17:20:36] -rw-------. 1 boincer umatlas        95 Jul 23 17:20 pilot_heartbeat.json
[2025-07-23 17:20:36] -rw-------. 1 boincer umatlas       823 Jul 23 17:20 pilotlog.txt
[2025-07-23 17:20:36] -rw-------. 1 boincer umatlas   2127402 Jul 23 17:20 log.45697472._003361.job.log.1
[2025-07-23 17:20:36] -rw-------. 1 boincer umatlas       357 Jul 23 17:20 output.list
[2025-07-23 17:20:36] -rw-r--r--. 1 boincer umatlas       620 Jul 23 17:20 runtime_log
[2025-07-23 17:20:36] -rw-------. 1 boincer umatlas   2641920 Jul 23 17:20 result.tar.gz
[2025-07-23 17:20:36] -rw-------. 1 boincer umatlas       659 Jul 23 17:20 whWKDm3Fiy7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmB4KLDmv38pRm.diag
[2025-07-23 17:20:36] -rw-r--r--. 1 boincer umatlas      8661 Jul 23 17:20 runtime_log.err
[2025-07-23 17:20:36] -rw-r--r--. 1 boincer umatlas     21063 Jul 23 17:20 stderr.txt
[2025-07-23 17:20:36] HITS file was successfully produced:
[2025-07-23 17:20:36] -rw-------. 1 boincer umatlas 282094411 Jul 23 17:18 shared/HITS.pool.root.1
[2025-07-23 17:20:36]  *** Contents of shared directory: ***
[2025-07-23 17:20:36] total 605140
[2025-07-23 17:20:36] -rw-r--r--. 2 boincer umatlas 334359902 Jul 23 10:06 ATLAS.root_0
[2025-07-23 17:20:36] -rw-r--r--. 2 boincer umatlas     15095 Jul 23 10:06 start_atlas.sh
[2025-07-23 17:20:36] -rw-r--r--. 2 boincer umatlas    542900 Jul 23 10:06 input.tar.gz
[2025-07-23 17:20:36] -rw-------. 1 boincer umatlas 282094411 Jul 23 17:18 HITS.pool.root.1
[2025-07-23 17:20:36] -rw-------. 1 boincer umatlas   2641920 Jul 23 17:20 result.tar.gz
17:20:37 (1185787): run_atlas exited; CPU time 74452.603582
17:20:37 (1185787): called boinc_finish(0)

</stderr_txt>
]]>

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