Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
06:43:40 (1983725): wrapper (7.7.26015): starting
06:43:40 (1983725): wrapper: running run_atlas (--nthreads 8)
[2025-07-23 06:43:40] Arguments: --nthreads 8
[2025-07-23 06:43:40] Threads: 8
[2025-07-23 06:43:40] Checking for CVMFS
[2025-07-23 06:43:40] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-23 06:43:40] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-23 06:43:40] Running cvmfs_config stat atlas.cern.ch
[2025-07-23 06:43:41] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-23 06:43:41] 2.11.3.0 1807141 103942 245528 148659 3 367 29724450 45568001 14895 130560 0 830883292 99.806 515960537 18724 http://cvmfs-s1bnl.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://206.12.9.162:3129 1
[2025-07-23 06:43:41] CVMFS is ok
[2025-07-23 06:43:41] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-07-23 06:43:41] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-07-23 06:43:41] Further information can be found at the LHC@home message board.
[2025-07-23 06:43:41] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-23 06:43:41] Checking for apptainer binary...
[2025-07-23 06:43:41] Using apptainer found in PATH at /usr/bin/apptainer
[2025-07-23 06:43:41] Running /usr/bin/apptainer --version
[2025-07-23 06:43:41] apptainer version 1.3.3-1.el9
[2025-07-23 06:43:41] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-23 06:43:42] WARNING: Environment variable TMPDIR already has value [/home/boinc/slots/0/.apptainertmp], will not forward new value [/home/boinc] from parent process environment wns0010.triumf.lcg
[2025-07-23 06:43:42] apptainer works
[2025-07-23 06:43:42] Set ATHENA_PROC_NUMBER=8
[2025-07-23 06:43:42] Set ATHENA_CORE_NUMBER=8
[2025-07-23 06:43:42] Starting ATLAS job with PandaID=6741891474
[2025-07-23 06:43:42] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-23 06:47:54]  *** The last 200 lines of the pilot log: ***
[2025-07-23 06:47:54] 2025-07-23 13:47:19,486 | WARNING  | found no stored workdir sizes
[2025-07-23 06:47:54] 2025-07-23 13:47:19,486 | INFO     | will not add max space = 0 B to job metrics
[2025-07-23 06:47:54] 2025-07-23 13:47:19,486 | WARNING  | wrong length of table data, x=[1753278279.0], y=[10994.0] (must be same and length>=4)
[2025-07-23 06:47:54] 2025-07-23 13:47:19,487 | INFO     | could have reported an average CPU frequency of 2095 MHz (4 samples)
[2025-07-23 06:47:54] 2025-07-23 13:47:19,487 | INFO     | ..............................
[2025-07-23 06:47:54] 2025-07-23 13:47:19,487 | INFO     | . Timing measurements:
[2025-07-23 06:47:54] 2025-07-23 13:47:19,487 | INFO     | . get job = 0 s
[2025-07-23 06:47:54] 2025-07-23 13:47:19,487 | INFO     | . initial setup = 3 s
[2025-07-23 06:47:54] 2025-07-23 13:47:19,487 | INFO     | . payload setup = 12 s
[2025-07-23 06:47:54] 2025-07-23 13:47:19,487 | INFO     | . stage-in = 0 s
[2025-07-23 06:47:54] 2025-07-23 13:47:19,487 | INFO     | . payload execution = 36 s
[2025-07-23 06:47:54] 2025-07-23 13:47:19,487 | INFO     | . stage-out = 1 s
[2025-07-23 06:47:54] 2025-07-23 13:47:19,487 | INFO     | . log creation = 0 s
[2025-07-23 06:47:54] 2025-07-23 13:47:19,487 | INFO     | ..............................
[2025-07-23 06:47:54] 2025-07-23 13:47:19,487 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-07-23 06:47:54] 2025-07-23 13:47:19,488 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6741891474/pilotlog.txt
[2025-07-23 06:47:54] 2025-07-23 13:47:19,499 | WARNING  | detected the following tail of warning/fatal messages in the pilot log:
[2025-07-23 06:47:54] - Log from pilotlog.txt -
[2025-07-23 06:47:54] 2025-07-23 13:47:19,485 | INFO     | extracted standard memory fields from prmon json
[2025-07-23 06:47:54] 2025-07-23 13:47:19,485 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-23 06:47:54] 2025-07-23 13:47:19,486 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-23 06:47:54] 2025-07-23 13:47:19,486 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-23 06:47:54] 2025-07-23 13:47:19,486 | WARNING  | found no stored workdir sizes
[2025-07-23 06:47:54] 2025-07-23 13:47:19,486 | INFO     | will not add max space = 0 B to job metrics
[2025-07-23 06:47:54] 2025-07-23 13:47:19,486 | WARNING  | wrong length of table data, x=[1753278279.0], y=[10994.0] (must be same and length>=4)
[2025-07-23 06:47:54] 2025-07-23 13:47:19,487 | INFO     | could have reported an average CPU frequency of 2095 MHz (4 samples)
[2025-07-23 06:47:54] 2025-07-23 13:47:19,487 | INFO     | ..............................
[2025-07-23 06:47:54] 2025-07-23 13:47:19,487 | INFO     | . Timing measurements:
[2025-07-23 06:47:54] 2025-07-23 13:47:19,487 | INFO     | . get job = 0 s
[2025-07-23 06:47:54] 2025-07-23 13:47:19,487 | INFO     | . initial setup = 3 s
[2025-07-23 06:47:54] 2025-07-23 13:47:19,487 | INFO     | . payload setup = 12 s
[2025-07-23 06:47:54] 2025-07-23 13:47:19,487 | INFO     | . stage-in = 0 s
[2025-07-23 06:47:54] 2025-07-23 13:47:19,487 | INFO     | . payload execution = 36 s
[2025-07-23 06:47:54] 2025-07-23 13:47:19,487 | INFO     | . stage-out = 1 s
[2025-07-23 06:47:54] 2025-07-23 13:47:19,487 | INFO     | . log creation = 0 s
[2025-07-23 06:47:54] 2025-07-23 13:47:19,487 | INFO     | ..............................
[2025-07-23 06:47:54] 2025-07-23 13:47:19,487 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-07-23 06:47:54] 2025-07-23 13:47:19,488 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6741891474/pilotlog.txt
[2025-07-23 06:47:54] 2025-07-23 13:47:19,499 | WARNING  | 
[2025-07-23 06:47:54] [begin log extracts]
[2025-07-23 06:47:54] - Log from pilotlog.txt -
[2025-07-23 06:47:54] 2025-07-23 13:47:19,485 | INFO     | extracted standard memory fields from prmon json
[2025-07-23 06:47:54] 2025-07-23 13:47:19,485 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-23 06:47:54] 2025-07-23 13:47:19,486 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-23 06:47:54] 2025-07-23 13:47:19,486 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-23 06:47:54] 2025-07-23 13:47:19,486 | WARNING  | found no stored workdir sizes
[2025-07-23 06:47:54] 2025-07-23 13:47:19,486 | INFO     | will not add max space = 0 B to job metrics
[2025-07-23 06:47:54] 2025-07-23 13:47:19,486 | WARNING  | wrong length of table data, x=[1753278279.0], y=[10994.0] (must be same and length>=4)
[2025-07-23 06:47:54] 2025-07-23 13:47:19,487 | INFO     | could have reported an average CPU frequency of 2095 MHz (4 samples)
[2025-07-23 06:47:54] 2025-07-23 13:47:19,487 | INFO     | ..............................
[2025-07-23 06:47:54] 2025-07-23 13:47:19,487 | INFO     | . Timing measurements:
[2025-07-23 06:47:54] 2025-07-23 13:47:19,487 | INFO     | . get job = 0 s
[2025-07-23 06:47:54] 2025-07-23 13:47:19,487 | INFO     | . initial setup = 3 s
[2025-07-23 06:47:54] 2025-07-23 13:47:19,487 | INFO     | . payload setup = 12 s
[2025-07-23 06:47:54] 2025-07-23 13:47:19,487 | INFO     | . stage-in = 0 s
[2025-07-23 06:47:54] 2025-07-23 13:47:19,487 | INFO     | . payload execution = 36 s
[2025-07-23 06:47:54] 2025-07-23 13:47:19,487 | INFO     | . stage-out = 1 s
[2025-07-23 06:47:54] 2025-07-23 13:47:19,487 | INFO     | . log creation = 0 s
[2025-07-23 06:47:54] 2025-07-23 13:47:19,487 | INFO     | ..............................
[2025-07-23 06:47:54] 2025-07-23 13:47:19,487 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-07-23 06:47:54] 2025-07-23 13:47:19,488 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6741891474/pilotlog.txt
[2025-07-23 06:47:54] [end log extracts]
[2025-07-23 06:47:54] 2025-07-23 13:47:19,500 | WARNING  | pilotErrorCodes = [1305] (will report primary/first error code)
[2025-07-23 06:47:54] 2025-07-23 13:47:19,500 | WARNING  | pilotErrorDiags = ['Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return c
[2025-07-23 06:47:54] 2025-07-23 13:47:19,593 | INFO     | 
[2025-07-23 06:47:54] 2025-07-23 13:47:19,593 | INFO     | job summary report
[2025-07-23 06:47:54] 2025-07-23 13:47:19,594 | INFO     | --------------------------------------------------
[2025-07-23 06:47:54] 2025-07-23 13:47:19,594 | INFO     | PanDA job id: 6741891474
[2025-07-23 06:47:54] 2025-07-23 13:47:19,594 | INFO     | task id: 45697490
[2025-07-23 06:47:54] 2025-07-23 13:47:19,594 | INFO     | error 1/1: 1305: Failed to execute payload:PyJobTransforms.transform.execute 2025-07-23 06:44:59,160 CRITICAL Transform executor raised TransformValidationExceptio
[2025-07-23 06:47:54] 2025-07-23 13:47:19,594 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-23 06:47:54] 2025-07-23 13:47:19,594 | INFO     | pilot state: failed 
[2025-07-23 06:47:54] 2025-07-23 13:47:19,594 | INFO     | transexitcode: 65
[2025-07-23 06:47:54] 2025-07-23 13:47:19,594 | INFO     | exeerrorcode: 65
[2025-07-23 06:47:54] 2025-07-23 13:47:19,594 | INFO     | exeerrordiag: Non-zero return code from EVNTtoHITS (1)
[2025-07-23 06:47:54] 2025-07-23 13:47:19,594 | INFO     | exitcode: 65
[2025-07-23 06:47:54] 2025-07-23 13:47:19,594 | INFO     | exitmsg: Non-zero return code from EVNTtoHITS (1)
[2025-07-23 06:47:54] 2025-07-23 13:47:19,594 | INFO     | cpuconsumptiontime: 18 s
[2025-07-23 06:47:54] 2025-07-23 13:47:19,594 | INFO     | nevents: 0
[2025-07-23 06:47:54] 2025-07-23 13:47:19,595 | INFO     | neventsw: 0
[2025-07-23 06:47:54] 2025-07-23 13:47:19,595 | INFO     | pid: 2006396
[2025-07-23 06:47:54] 2025-07-23 13:47:19,595 | INFO     | pgrp: 2006396
[2025-07-23 06:47:54] 2025-07-23 13:47:19,595 | INFO     | corecount: 8
[2025-07-23 06:47:54] 2025-07-23 13:47:19,595 | INFO     | event service: False
[2025-07-23 06:47:54] 2025-07-23 13:47:19,595 | INFO     | sizes: {0: 2397330, 1: 2397529, 10: 2397791, 12: 2397819, 53: 2421047, 55: 2425339, 56: 2425495, 184: 2425661}
[2025-07-23 06:47:54] 2025-07-23 13:47:19,595 | INFO     | --------------------------------------------------
[2025-07-23 06:47:54] 2025-07-23 13:47:19,595 | INFO     | 
[2025-07-23 06:47:54] 2025-07-23 13:47:19,595 | INFO     | executing command: ls -lF /home/boinc/slots/0
[2025-07-23 06:47:54] 2025-07-23 13:47:19,611 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-23 06:47:54] 2025-07-23 13:47:19,612 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-23 06:47:54] 2025-07-23 13:47:19,612 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-23 06:47:54] 2025-07-23 13:47:19,612 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-23 06:47:54] 2025-07-23 13:47:19,612 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-23 06:47:54] 2025-07-23 13:47:19,612 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-23 06:47:54] 2025-07-23 13:47:19,612 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-23 06:47:54] 2025-07-23 13:47:19,612 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-23 06:47:54] 2025-07-23 13:47:19,612 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-23 06:47:54] 2025-07-23 13:47:19,612 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-23 06:47:54] 2025-07-23 13:47:19,612 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-23 06:47:54] 2025-07-23 13:47:19,612 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-23 06:47:54] 2025-07-23 13:47:19,612 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-23 06:47:54] 2025-07-23 13:47:19,612 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-23 06:47:54] 2025-07-23 13:47:19,613 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-23 06:47:54] 2025-07-23 13:47:19,613 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-23 06:47:54] 2025-07-23 13:47:19,613 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-23 06:47:54] 2025-07-23 13:47:19,613 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-23 06:47:54] 2025-07-23 13:47:19,613 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-23 06:47:54] 2025-07-23 13:47:19,613 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-23 06:47:54] 2025-07-23 13:47:19,613 | INFO     | job 6741891474 has completed (purged errors)
[2025-07-23 06:47:54] 2025-07-23 13:47:19,613 | INFO     | overall cleanup function is called
[2025-07-23 06:47:54] 2025-07-23 13:47:20,620 | INFO     | --- collectZombieJob: --- 10, [2006396]
[2025-07-23 06:47:54] 2025-07-23 13:47:20,620 | INFO     | zombie collector waiting for pid 2006396
[2025-07-23 06:47:54] 2025-07-23 13:47:20,620 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-23 06:47:54] 2025-07-23 13:47:20,620 | INFO     | collected zombie processes
[2025-07-23 06:47:54] 2025-07-23 13:47:20,620 | INFO     | will attempt to kill all subprocesses of pid=2006396
[2025-07-23 06:47:54] 2025-07-23 13:47:21,400 | INFO     | PID=1992337 has CPU usage=2.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-07-23 06:47:54] 2025-07-23 13:47:21,400 | INFO     | .. there are 26 such processes running
[2025-07-23 06:47:54] 2025-07-23 13:47:21,452 | INFO     | process IDs to be killed: [2006396] (in reverse order)
[2025-07-23 06:47:54] 2025-07-23 13:47:21,833 | WARNING  | found no corresponding commands to process id(s)
[2025-07-23 06:47:54] 2025-07-23 13:47:21,834 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-23 06:47:54] 2025-07-23 13:47:21,842 | INFO     | did not find any defunct processes belonging to 2006396
[2025-07-23 06:47:54] 2025-07-23 13:47:21,850 | INFO     | did not find any defunct processes belonging to 2006396
[2025-07-23 06:47:54] 2025-07-23 13:47:21,850 | INFO     | ready for new job
[2025-07-23 06:47:54] 2025-07-23 13:47:21,850 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-23 06:47:54] 2025-07-23 13:47:21,852 | INFO     | ***************************************
[2025-07-23 06:47:54] 2025-07-23 13:47:21,852 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-23 06:47:54] 2025-07-23 13:47:21,852 | INFO     | ***************************************
[2025-07-23 06:47:54] 2025-07-23 13:47:21,852 | INFO     | 
[2025-07-23 06:47:54] 2025-07-23 13:47:21,866 | INFO     | architecture information:
[2025-07-23 06:47:54] 2025-07-23 13:47:21,867 | INFO     | executing command: cat /etc/os-release
[2025-07-23 06:47:54] 2025-07-23 13:47:21,879 | INFO     | cat /etc/os-release:
[2025-07-23 06:47:54] NAME="CentOS Linux"
[2025-07-23 06:47:54] VERSION="7 (Core)"
[2025-07-23 06:47:54] ID="centos"
[2025-07-23 06:47:54] ID_LIKE="rhel fedora"
[2025-07-23 06:47:54] VERSION_ID="7"
[2025-07-23 06:47:54] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-23 06:47:54] ANSI_COLOR="0;31"
[2025-07-23 06:47:54] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-23 06:47:54] HOME_URL="https://www.centos.org/"
[2025-07-23 06:47:54] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-23 06:47:54] 
[2025-07-23 06:47:54] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-23 06:47:54] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-23 06:47:54] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-23 06:47:54] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-23 06:47:54] 
[2025-07-23 06:47:54] 2025-07-23 13:47:21,879 | INFO     | ***************************************
[2025-07-23 06:47:54] 2025-07-23 13:47:22,383 | INFO     | executing command: df -mP /home/boinc/slots/0
[2025-07-23 06:47:54] 2025-07-23 13:47:22,420 | INFO     | sufficient remaining disk space (1084100706304 B)
[2025-07-23 06:47:54] 2025-07-23 13:47:22,421 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-23 06:47:54] 2025-07-23 13:47:22,421 | INFO     | current server update state: UPDATING_FINAL
[2025-07-23 06:47:54] 2025-07-23 13:47:22,421 | INFO     | update_server=False
[2025-07-23 06:47:54] 2025-07-23 13:47:22,421 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-23 06:47:54] 2025-07-23 13:47:22,553 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-23 06:47:54] 2025-07-23 13:47:22,553 | INFO     | aborting loop
[2025-07-23 06:47:54] 2025-07-23 13:47:22,920 | INFO     | all data control threads have been joined
[2025-07-23 06:47:54] 2025-07-23 13:47:23,151 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-23 06:47:54] 2025-07-23 13:47:23,265 | INFO     | all job control threads have been joined
[2025-07-23 06:47:54] 2025-07-23 13:47:23,427 | INFO     | [job] retrieve thread has finished
[2025-07-23 06:47:54] 2025-07-23 13:47:23,428 | INFO     | all payload control threads have been joined
[2025-07-23 06:47:54] 2025-07-23 13:47:23,444 | INFO     | [job] validate thread has finished
[2025-07-23 06:47:54] 2025-07-23 13:47:23,559 | INFO     | [job] job monitor thread has finished
[2025-07-23 06:47:54] 2025-07-23 13:47:23,592 | INFO     | [job] create_data_payload thread has finished
[2025-07-23 06:47:54] 2025-07-23 13:47:23,926 | INFO     | [data] control thread has finished
[2025-07-23 06:47:54] 2025-07-23 13:47:23,932 | INFO     | [payload] validate_post thread has finished
[2025-07-23 06:47:54] 2025-07-23 13:47:23,961 | INFO     | [data] copytool_in thread has finished
[2025-07-23 06:47:54] 2025-07-23 13:47:24,054 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-23 06:47:54] 2025-07-23 13:47:24,190 | INFO     | [payload] validate_pre thread has finished
[2025-07-23 06:47:54] 2025-07-23 13:47:24,271 | INFO     | [job] control thread has finished
[2025-07-23 06:47:54] 2025-07-23 13:47:24,434 | INFO     | [payload] control thread has finished
[2025-07-23 06:47:54] 2025-07-23 13:47:24,525 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-23 06:47:54] 2025-07-23 13:47:24,537 | INFO     | [payload] failed_post thread has finished
[2025-07-23 06:47:54] 2025-07-23 13:47:24,631 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-23 06:47:54] 2025-07-23 13:47:24,825 | INFO     | [payload] execute_payloads thread has finished
[2025-07-23 06:47:54] 2025-07-23 13:47:25,158 | INFO     | [data] copytool_out thread has finished
[2025-07-23 06:47:54] 2025-07-23 13:47:25,638 | INFO     | [job] queue monitor thread has finished
[2025-07-23 06:47:54] 2025-07-23 13:47:28,063 | INFO     | [data] queue_monitor thread has finished
[2025-07-23 06:47:54] 2025-07-23 13:47:28,386 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139681954637632)>', '<ExcThread(monitor, started 139681060615936)>']
[2025-07-23 06:47:54] 2025-07-23 13:47:33,412 | INFO     | all workflow threads have been joined
[2025-07-23 06:47:54] 2025-07-23 13:47:33,413 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-23 06:47:54] 2025-07-23 13:47:33,413 | INFO     | traces error code: 0
[2025-07-23 06:47:54] 2025-07-23 13:47:33,413 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-23 06:47:54] 2025-07-23 13:47:54,089 | INFO     | PID=1992337 has CPU usage=1.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-07-23 06:47:54] 2025-07-23 13:47:54,089 | INFO     | .. there are 26 such processes running
[2025-07-23 06:47:54] 2025-07-23 13:47:54,090 | INFO     | found 0 job(s) in 20 queues
[2025-07-23 06:47:54] 2025-07-23 13:47:54,090 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-23 06:47:54] 2025-07-23 13:47:54,090 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-23 06:47:54] 2025-07-23 13:47:54,090 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-23 06:47:54] 2025-07-23 13:47:54,090 | INFO     | [monitor] control thread has ended
[2025-07-23 06:47:54] 2025-07-23 13:47:54,222 [wrapper] ==== pilot stdout END ====
[2025-07-23 06:47:54] 2025-07-23 13:47:54,225 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-23 06:47:54] 2025-07-23 13:47:54,226 [wrapper] pilotpid: 1992337
[2025-07-23 06:47:54] 2025-07-23 13:47:54,228 [wrapper] Pilot exit status: 0
[2025-07-23 06:47:54] 2025-07-23 13:47:54,249 [wrapper] pandaids: 6741891474
[2025-07-23 06:47:54] 2025-07-23 13:47:54,290 [wrapper] cleanup supervisor_pilot 1992346 1992338
[2025-07-23 06:47:54] 2025-07-23 13:47:54,292 [wrapper] Test setup, not cleaning
[2025-07-23 06:47:54] 2025-07-23 13:47:54,294 [wrapper] apfmon messages muted
[2025-07-23 06:47:54] 2025-07-23 13:47:54,296 [wrapper] ==== wrapper stdout END ====
[2025-07-23 06:47:54] 2025-07-23 13:47:54,298 [wrapper] ==== wrapper stderr END ====
[2025-07-23 06:47:54]  *** Error codes and diagnostics ***
[2025-07-23 06:47:54]     "exeErrorCode": 65,
[2025-07-23 06:47:54]     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (1)",
[2025-07-23 06:47:54]     "pilotErrorCode": 1305,
[2025-07-23 06:47:54]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (1)",
[2025-07-23 06:47:54]  *** Listing of results directory ***
[2025-07-23 06:47:54] total 340524
[2025-07-23 06:47:54] -rw-r--r--. 1 boinc boinc    530466 Jul 23 02:49 pilot3.tar.gz
[2025-07-23 06:47:54] -rw-r--r--. 1 boinc boinc      5112 Jul 23 02:57 queuedata.json
[2025-07-23 06:47:54] -rwx------. 1 boinc boinc     36292 Jul 23 02:59 runpilot2-wrapper.sh
[2025-07-23 06:47:54] -rw-r--r--. 1 boinc boinc       100 Jul 23 06:41 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-23 06:47:54] -rwxr-xr-x. 1 boinc boinc      7986 Jul 23 06:41 run_atlas
[2025-07-23 06:47:54] -rw-r--r--. 1 boinc boinc       105 Jul 23 06:41 job.xml
[2025-07-23 06:47:54] -rw-r--r--. 2 boinc boinc 344633852 Jul 23 06:43 EVNT.45697488._000228.pool.root.1
[2025-07-23 06:47:54] -rw-r--r--. 1 boinc boinc      6447 Jul 23 06:43 init_data.xml
[2025-07-23 06:47:54] drwxrwx--x. 2 boinc boinc      4096 Jul 23 06:43 shared
[2025-07-23 06:47:54] -rw-r--r--. 2 boinc boinc    542900 Jul 23 06:43 input.tar.gz
[2025-07-23 06:47:54] -rw-r--r--. 2 boinc boinc     15095 Jul 23 06:43 start_atlas.sh
[2025-07-23 06:47:54] -rw-r--r--. 1 boinc boinc         0 Jul 23 06:43 boinc_lockfile
[2025-07-23 06:47:54] -rw-r--r--. 1 boinc boinc      2590 Jul 23 06:43 pandaJob.out
[2025-07-23 06:47:54] -rw-------. 1 boinc boinc    978503 Jul 23 06:43 agis_schedconf.cvmfs.json
[2025-07-23 06:47:54] -rw-------. 1 boinc boinc   1593041 Jul 23 06:43 agis_ddmendpoints.agis.ALL.json
[2025-07-23 06:47:54] drwx------. 4 boinc boinc      4096 Jul 23 06:43 pilot3
[2025-07-23 06:47:54] -rw-r--r--. 1 boinc boinc       522 Jul 23 06:44 boinc_task_state.xml
[2025-07-23 06:47:54] -rw-------. 1 boinc boinc       961 Jul 23 06:45 memory_monitor_summary.json
[2025-07-23 06:47:54] -rw-------. 1 boinc boinc     20206 Jul 23 06:45 log.45697490._005168.job.log.tgz.1
[2025-07-23 06:47:54] -rw-------. 1 boinc boinc        95 Jul 23 06:46 pilot_heartbeat.json
[2025-07-23 06:47:54] -rw-------. 1 boinc boinc      8384 Jul 23 06:47 heartbeat.json
[2025-07-23 06:47:54] -rw-r--r--. 1 boinc boinc      8192 Jul 23 06:47 boinc_mmap_file
[2025-07-23 06:47:54] -rw-r--r--. 1 boinc boinc        22 Jul 23 06:47 wrapper_checkpoint.txt
[2025-07-23 06:47:54] -rw-------. 1 boinc boinc       823 Jul 23 06:47 pilotlog.txt
[2025-07-23 06:47:54] -rw-------. 1 boinc boinc     77433 Jul 23 06:47 log.45697490._005168.job.log.1
[2025-07-23 06:47:54] -rw-------. 1 boinc boinc       188 Jul 23 06:47 output.list
[2025-07-23 06:47:54] -rw-r--r--. 1 boinc boinc       620 Jul 23 06:47 runtime_log
[2025-07-23 06:47:54] -rw-------. 1 boinc boinc    112640 Jul 23 06:47 result.tar.gz
[2025-07-23 06:47:54] -rw-r--r--. 1 boinc boinc      8648 Jul 23 06:47 runtime_log.err
[2025-07-23 06:47:54] -rw-------. 1 boinc boinc       645 Jul 23 06:47 DxHODmwQly7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmtOLLDmZBdJKo.diag
[2025-07-23 06:47:54] -rw-r--r--. 1 boinc boinc     21942 Jul 23 06:47 stderr.txt
[2025-07-23 06:47:54] No HITS result produced
[2025-07-23 06:47:54]  *** Contents of shared directory: ***
[2025-07-23 06:47:54] total 337224
[2025-07-23 06:47:54] -rw-r--r--. 2 boinc boinc 344633852 Jul 23 06:43 ATLAS.root_0
[2025-07-23 06:47:54] -rw-r--r--. 2 boinc boinc    542900 Jul 23 06:43 input.tar.gz
[2025-07-23 06:47:54] -rw-r--r--. 2 boinc boinc     15095 Jul 23 06:43 start_atlas.sh
[2025-07-23 06:47:54] -rw-------. 1 boinc boinc    112640 Jul 23 06:47 result.tar.gz
06:47:56 (1983725): run_atlas exited; CPU time 25.042925
06:47:56 (1983725): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN