Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
09:39:27 (36500): wrapper (7.7.26015): starting
09:39:27 (36500): wrapper: running run_atlas (--nthreads 8)
[2025-07-23 09:39:27] Arguments: --nthreads 8
[2025-07-23 09:39:27] Threads: 8
[2025-07-23 09:39:27] Checking for CVMFS
[2025-07-23 09:39:27] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-23 09:39:28] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-23 09:39:28] Running cvmfs_config stat atlas.cern.ch
[2025-07-23 09:39:28] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-23 09:39:28] 2.11.2.0 30725 174319 377144 148659 1 188 13287548 18432001 3147 130560 0 741310223 99.172 1374483380 37282 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-07-23 09:39:28] CVMFS is ok
[2025-07-23 09:39:28] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-07-23 09:39:28] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-07-23 09:39:28] Further information can be found at the LHC@home message board.
[2025-07-23 09:39:28] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-23 09:39:28] Checking for apptainer binary...
[2025-07-23 09:39:28] Using apptainer found in PATH at /usr/bin/apptainer
[2025-07-23 09:39:28] Running /usr/bin/apptainer --version
[2025-07-23 09:39:28] apptainer version 1.3.2-1.el7
[2025-07-23 09:39:28] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-23 09:39:28] c-210-28.aglt2.org
[2025-07-23 09:39:28] apptainer works
[2025-07-23 09:39:28] Set ATHENA_PROC_NUMBER=8
[2025-07-23 09:39:28] Set ATHENA_CORE_NUMBER=8
[2025-07-23 09:39:28] Starting ATLAS job with PandaID=6741686158
[2025-07-23 09:39:28] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-23 12:08:17]  *** The last 200 lines of the pilot log: ***
[2025-07-23 12:08:17] 2025-07-23 16:07:45,479 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-23 12:08:17] 2025-07-23 16:07:45,479 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-23 12:08:17] 2025-07-23 16:07:45,482 | INFO     | fitting pss+swap vs Time
[2025-07-23 12:08:17] 2025-07-23 16:07:45,483 | INFO     | sum of square deviations: 964976232.5
[2025-07-23 12:08:17] 2025-07-23 16:07:45,484 | INFO     | sum of deviations: 8201281762.000002
[2025-07-23 12:08:17] 2025-07-23 16:07:45,484 | INFO     | mean x: 1753282423.5
[2025-07-23 12:08:17] 2025-07-23 16:07:45,484 | INFO     | mean y: 2498725.6301369863
[2025-07-23 12:08:17] 2025-07-23 16:07:45,484 | INFO     | -- intersect: -14898555496.434048
[2025-07-23 12:08:17] 2025-07-23 16:07:45,484 | INFO     | intersect: -14898555496.434048
[2025-07-23 12:08:17] 2025-07-23 16:07:45,485 | INFO     | chi2: 2.003126929488633
[2025-07-23 12:08:17] 2025-07-23 16:07:45,485 | INFO     | sum of square deviations: 869188390.0
[2025-07-23 12:08:17] 2025-07-23 16:07:45,486 | INFO     | sum of deviations: 17682911129.000004
[2025-07-23 12:08:17] 2025-07-23 16:07:45,486 | INFO     | mean x: 1753282271.0
[2025-07-23 12:08:17] 2025-07-23 16:07:45,486 | INFO     | mean y: 2513377.361702128
[2025-07-23 12:08:17] 2025-07-23 16:07:45,486 | INFO     | -- intersect: -35666548633.6303
[2025-07-23 12:08:17] 2025-07-23 16:07:45,486 | INFO     | intersect: -35666548633.6303
[2025-07-23 12:08:17] 2025-07-23 16:07:45,487 | INFO     | chi2: 1.1842841418019467
[2025-07-23 12:08:17] 2025-07-23 16:07:45,487 | INFO     | current chi2=1.1842841418019467 (change=40.87822771648945 %)
[2025-07-23 12:08:17] 2025-07-23 16:07:45,487 | INFO     | sum of square deviations: 779958810.0
[2025-07-23 12:08:17] 2025-07-23 16:07:45,488 | INFO     | sum of deviations: 16973685753.5
[2025-07-23 12:08:17] 2025-07-23 16:07:45,488 | INFO     | mean x: 1753282118.5
[2025-07-23 12:08:17] 2025-07-23 16:07:45,488 | INFO     | mean y: 2512165.669117647
[2025-07-23 12:08:17] 2025-07-23 16:07:45,488 | INFO     | -- intersect: -38152912627.40392
[2025-07-23 12:08:17] 2025-07-23 16:07:45,488 | INFO     | intersect: -38152912627.40392
[2025-07-23 12:08:17] 2025-07-23 16:07:45,489 | INFO     | chi2: 1.1853156191884575
[2025-07-23 12:08:17] 2025-07-23 16:07:45,489 | INFO     | current chi2=1.1853156191884575 (change=-0.08709712053910702 %)
[2025-07-23 12:08:17] 2025-07-23 16:07:45,489 | INFO     | right removable region: 135
[2025-07-23 12:08:17] 2025-07-23 16:07:45,489 | INFO     | sum of square deviations: 869188390.0
[2025-07-23 12:08:17] 2025-07-23 16:07:45,490 | INFO     | sum of deviations: -10892959222.0
[2025-07-23 12:08:17] 2025-07-23 16:07:45,490 | INFO     | mean x: 1753282576.0
[2025-07-23 12:08:17] 2025-07-23 16:07:45,490 | INFO     | mean y: 2528672.340425532
[2025-07-23 12:08:17] 2025-07-23 16:07:45,490 | INFO     | -- intersect: 21975251530.512886
[2025-07-23 12:08:17] 2025-07-23 16:07:45,491 | INFO     | intersect: 21975251530.512886
[2025-07-23 12:08:17] 2025-07-23 16:07:45,491 | INFO     | chi2: 0.850188312836469
[2025-07-23 12:08:17] 2025-07-23 16:07:45,491 | INFO     | current chi2=0.850188312836469 (change=57.556942582090464 %)
[2025-07-23 12:08:17] 2025-07-23 16:07:45,491 | INFO     | sum of square deviations: 779958810.0
[2025-07-23 12:08:17] 2025-07-23 16:07:45,492 | INFO     | sum of deviations: -11282024725.0
[2025-07-23 12:08:17] 2025-07-23 16:07:45,492 | INFO     | mean x: 1753282728.5
[2025-07-23 12:08:17] 2025-07-23 16:07:45,492 | INFO     | mean y: 2529320.3088235296
[2025-07-23 12:08:17] 2025-07-23 16:07:45,492 | INFO     | -- intersect: 25363585364.861305
[2025-07-23 12:08:17] 2025-07-23 16:07:45,493 | INFO     | intersect: 25363585364.861305
[2025-07-23 12:08:17] 2025-07-23 16:07:45,493 | INFO     | chi2: 0.8489834733261592
[2025-07-23 12:08:17] 2025-07-23 16:07:45,493 | INFO     | current chi2=0.8489834733261592 (change=0.14171442868817163 %)
[2025-07-23 12:08:17] 2025-07-23 16:07:45,493 | INFO     | left removable region: 20
[2025-07-23 12:08:17] 2025-07-23 16:07:45,493 | INFO     | sum of square deviations: 471562330.0
[2025-07-23 12:08:17] 2025-07-23 16:07:45,494 | INFO     | sum of deviations: -364699968.0
[2025-07-23 12:08:17] 2025-07-23 16:07:45,494 | INFO     | mean x: 1753282698.0
[2025-07-23 12:08:17] 2025-07-23 16:07:45,494 | INFO     | mean y: 2542976.834782609
[2025-07-23 12:08:17] 2025-07-23 16:07:45,494 | INFO     | -- intersect: 1358508250.5146239
[2025-07-23 12:08:17] 2025-07-23 16:07:45,494 | INFO     | intersect: 1358508250.5146239
[2025-07-23 12:08:17] 2025-07-23 16:07:45,495 | INFO     | chi2: 0.0034054734946928284
[2025-07-23 12:08:17] 2025-07-23 16:07:45,495 | INFO     | -- intersect: 1358508250.5146239
[2025-07-23 12:08:17] 2025-07-23 16:07:45,495 | INFO     | current memory leak: -0.77 B/s (using 115 data points, chi2=0.00)
[2025-07-23 12:08:17] 2025-07-23 16:07:45,495 | INFO     | could have reported an average CPU frequency of 2598 MHz (8 samples)
[2025-07-23 12:08:17] 2025-07-23 16:07:45,496 | INFO     | ..............................
[2025-07-23 12:08:17] 2025-07-23 16:07:45,496 | INFO     | . Timing measurements:
[2025-07-23 12:08:17] 2025-07-23 16:07:45,496 | INFO     | . get job = 0 s
[2025-07-23 12:08:17] 2025-07-23 16:07:45,496 | INFO     | . initial setup = 2 s
[2025-07-23 12:08:17] 2025-07-23 16:07:45,496 | INFO     | . payload setup = 5 s
[2025-07-23 12:08:17] 2025-07-23 16:07:45,496 | INFO     | . stage-in = 0 s
[2025-07-23 12:08:17] 2025-07-23 16:07:45,496 | INFO     | . payload execution = 8857 s
[2025-07-23 12:08:17] 2025-07-23 16:07:45,496 | INFO     | . stage-out = 0 s
[2025-07-23 12:08:17] 2025-07-23 16:07:45,496 | INFO     | . log creation = 0 s
[2025-07-23 12:08:17] 2025-07-23 16:07:45,497 | INFO     | ..............................
[2025-07-23 12:08:17] 2025-07-23 16:07:45,567 | INFO     | 
[2025-07-23 12:08:17] 2025-07-23 16:07:45,568 | INFO     | job summary report
[2025-07-23 12:08:17] 2025-07-23 16:07:45,568 | INFO     | --------------------------------------------------
[2025-07-23 12:08:17] 2025-07-23 16:07:45,568 | INFO     | PanDA job id: 6741686158
[2025-07-23 12:08:17] 2025-07-23 16:07:45,568 | INFO     | task id: 45697523
[2025-07-23 12:08:17] 2025-07-23 16:07:45,568 | INFO     | errors: (none)
[2025-07-23 12:08:17] 2025-07-23 16:07:45,568 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-23 12:08:17] 2025-07-23 16:07:45,568 | INFO     | pilot state: finished 
[2025-07-23 12:08:17] 2025-07-23 16:07:45,568 | INFO     | transexitcode: 0
[2025-07-23 12:08:17] 2025-07-23 16:07:45,568 | INFO     | exeerrorcode: 0
[2025-07-23 12:08:17] 2025-07-23 16:07:45,569 | INFO     | exeerrordiag: 
[2025-07-23 12:08:17] 2025-07-23 16:07:45,569 | INFO     | exitcode: 0
[2025-07-23 12:08:17] 2025-07-23 16:07:45,569 | INFO     | exitmsg: OK
[2025-07-23 12:08:17] 2025-07-23 16:07:45,569 | INFO     | cpuconsumptiontime: 66494 s
[2025-07-23 12:08:17] 2025-07-23 16:07:45,569 | INFO     | nevents: 400
[2025-07-23 12:08:17] 2025-07-23 16:07:45,569 | INFO     | neventsw: 0
[2025-07-23 12:08:17] 2025-07-23 16:07:45,569 | INFO     | pid: 6110
[2025-07-23 12:08:17] 2025-07-23 16:07:45,569 | INFO     | pgrp: 6110
[2025-07-23 12:08:17] 2025-07-23 16:07:45,569 | INFO     | corecount: 8
[2025-07-23 12:08:17] 2025-07-23 16:07:45,570 | INFO     | event service: False
[2025-07-23 12:08:17] 2025-07-23 16:07:45,570 | INFO     | sizes: {0: 2397551, 1: 2397551, 4: 2397841, 11: 2397869, 8866: 2425973, 8868: 2434971, 8870: 2435155, 8874: 2435349}
[2025-07-23 12:08:17] 2025-07-23 16:07:45,570 | INFO     | --------------------------------------------------
[2025-07-23 12:08:17] 2025-07-23 16:07:45,570 | INFO     | 
[2025-07-23 12:08:17] 2025-07-23 16:07:45,570 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2025-07-23 12:08:17] 2025-07-23 16:07:45,584 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-23 12:08:17] 2025-07-23 16:07:45,584 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-23 12:08:17] 2025-07-23 16:07:45,584 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-23 12:08:17] 2025-07-23 16:07:45,584 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-23 12:08:17] 2025-07-23 16:07:45,584 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-23 12:08:17] 2025-07-23 16:07:45,584 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-23 12:08:17] 2025-07-23 16:07:45,584 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-23 12:08:17] 2025-07-23 16:07:45,585 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-23 12:08:17] 2025-07-23 16:07:45,585 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-23 12:08:17] 2025-07-23 16:07:45,585 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-23 12:08:17] 2025-07-23 16:07:45,585 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-23 12:08:17] 2025-07-23 16:07:45,585 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-23 12:08:17] 2025-07-23 16:07:45,585 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-23 12:08:17] 2025-07-23 16:07:45,585 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-23 12:08:17] 2025-07-23 16:07:45,585 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-23 12:08:17] 2025-07-23 16:07:45,586 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-23 12:08:17] 2025-07-23 16:07:45,586 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-23 12:08:17] 2025-07-23 16:07:45,586 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-23 12:08:17] 2025-07-23 16:07:45,586 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-23 12:08:17] 2025-07-23 16:07:45,586 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-23 12:08:17] 2025-07-23 16:07:45,586 | INFO     | job 6741686158 has completed (purged errors)
[2025-07-23 12:08:17] 2025-07-23 16:07:45,586 | INFO     | overall cleanup function is called
[2025-07-23 12:08:17] 2025-07-23 16:07:46,594 | INFO     | --- collectZombieJob: --- 10, [6110]
[2025-07-23 12:08:17] 2025-07-23 16:07:46,595 | INFO     | zombie collector waiting for pid 6110
[2025-07-23 12:08:17] 2025-07-23 16:07:46,595 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-23 12:08:17] 2025-07-23 16:07:46,595 | INFO     | collected zombie processes
[2025-07-23 12:08:17] 2025-07-23 16:07:46,595 | INFO     | will attempt to kill all subprocesses of pid=6110
[2025-07-23 12:08:17] 2025-07-23 16:07:46,775 | INFO     | process IDs to be killed: [6110] (in reverse order)
[2025-07-23 12:08:17] 2025-07-23 16:07:46,830 | WARNING  | found no corresponding commands to process id(s)
[2025-07-23 12:08:17] 2025-07-23 16:07:46,830 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-23 12:08:17] 2025-07-23 16:07:46,833 | INFO     | did not find any defunct processes belonging to 6110
[2025-07-23 12:08:17] 2025-07-23 16:07:46,836 | INFO     | did not find any defunct processes belonging to 6110
[2025-07-23 12:08:17] 2025-07-23 16:07:46,836 | INFO     | ready for new job
[2025-07-23 12:08:17] 2025-07-23 16:07:46,836 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-23 12:08:17] 2025-07-23 16:07:46,837 | INFO     | ***************************************
[2025-07-23 12:08:17] 2025-07-23 16:07:46,837 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-23 12:08:17] 2025-07-23 16:07:46,837 | INFO     | ***************************************
[2025-07-23 12:08:17] 2025-07-23 16:07:46,837 | INFO     | 
[2025-07-23 12:08:17] 2025-07-23 16:07:46,839 | INFO     | architecture information:
[2025-07-23 12:08:17] 2025-07-23 16:07:46,839 | INFO     | executing command: cat /etc/os-release
[2025-07-23 12:08:17] 2025-07-23 16:07:46,853 | INFO     | cat /etc/os-release:
[2025-07-23 12:08:17] NAME="CentOS Linux"
[2025-07-23 12:08:17] VERSION="7 (Core)"
[2025-07-23 12:08:17] ID="centos"
[2025-07-23 12:08:17] ID_LIKE="rhel fedora"
[2025-07-23 12:08:17] VERSION_ID="7"
[2025-07-23 12:08:17] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-23 12:08:17] ANSI_COLOR="0;31"
[2025-07-23 12:08:17] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-23 12:08:17] HOME_URL="https://www.centos.org/"
[2025-07-23 12:08:17] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-23 12:08:17] 
[2025-07-23 12:08:17] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-23 12:08:17] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-23 12:08:17] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-23 12:08:17] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-23 12:08:17] 
[2025-07-23 12:08:17] 2025-07-23 16:07:46,853 | INFO     | ***************************************
[2025-07-23 12:08:17] 2025-07-23 16:07:47,356 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2025-07-23 12:08:17] 2025-07-23 16:07:47,375 | INFO     | sufficient remaining disk space (53442772992 B)
[2025-07-23 12:08:17] 2025-07-23 16:07:47,375 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-23 12:08:17] 2025-07-23 16:07:47,375 | INFO     | current server update state: UPDATING_FINAL
[2025-07-23 12:08:17] 2025-07-23 16:07:47,375 | INFO     | update_server=False
[2025-07-23 12:08:17] 2025-07-23 16:07:47,376 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-23 12:08:17] 2025-07-23 16:07:47,376 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-23 12:08:17] 2025-07-23 16:07:47,440 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-23 12:08:17] 2025-07-23 16:07:47,592 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-23 12:08:17] 2025-07-23 16:07:47,592 | INFO     | aborting loop
[2025-07-23 12:08:17] 2025-07-23 16:07:47,916 | INFO     | all job control threads have been joined
[2025-07-23 12:08:17] 2025-07-23 16:07:47,930 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-23 12:08:17] 2025-07-23 16:07:48,012 | INFO     | all data control threads have been joined
[2025-07-23 12:08:17] 2025-07-23 16:07:48,021 | INFO     | all payload control threads have been joined
[2025-07-23 12:08:17] 2025-07-23 16:07:48,380 | INFO     | [job] retrieve thread has finished
[2025-07-23 12:08:17] 2025-07-23 16:07:48,381 | INFO     | [job] queue monitor thread has finished
[2025-07-23 12:08:17] 2025-07-23 16:07:48,416 | INFO     | [data] copytool_in thread has finished
[2025-07-23 12:08:17] 2025-07-23 16:07:48,490 | INFO     | [payload] validate_post thread has finished
[2025-07-23 12:08:17] 2025-07-23 16:07:48,523 | INFO     | [payload] validate_pre thread has finished
[2025-07-23 12:08:17] 2025-07-23 16:07:48,595 | INFO     | [job] job monitor thread has finished
[2025-07-23 12:08:17] 2025-07-23 16:07:48,741 | INFO     | [payload] failed_post thread has finished
[2025-07-23 12:08:17] 2025-07-23 16:07:48,921 | INFO     | [job] control thread has finished
[2025-07-23 12:08:17] 2025-07-23 16:07:49,017 | INFO     | [data] control thread has finished
[2025-07-23 12:08:17] 2025-07-23 16:07:49,026 | INFO     | [payload] control thread has finished
[2025-07-23 12:08:17] 2025-07-23 16:07:49,315 | INFO     | [payload] execute_payloads thread has finished
[2025-07-23 12:08:17] 2025-07-23 16:07:49,529 | INFO     | [job] validate thread has finished
[2025-07-23 12:08:17] 2025-07-23 16:07:49,678 | INFO     | [job] create_data_payload thread has finished
[2025-07-23 12:08:17] 2025-07-23 16:07:49,935 | INFO     | [data] copytool_out thread has finished
[2025-07-23 12:08:17] 2025-07-23 16:07:51,447 | INFO     | [data] queue_monitor thread has finished
[2025-07-23 12:08:17] 2025-07-23 16:07:58,119 | INFO     | job.realtimelogging is not enabled
[2025-07-23 12:08:17] 2025-07-23 16:07:59,124 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-23 12:08:17] 2025-07-23 16:08:00,552 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139852062500672)>', '<ExcThread(monitor, started 139851626170112)>']
[2025-07-23 12:08:17] 2025-07-23 16:08:05,577 | INFO     | all workflow threads have been joined
[2025-07-23 12:08:17] 2025-07-23 16:08:05,578 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-23 12:08:17] 2025-07-23 16:08:05,578 | INFO     | traces error code: 0
[2025-07-23 12:08:17] 2025-07-23 16:08:05,578 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-23 12:08:17] 2025-07-23 16:08:17,139 | INFO     | PID=40151 has CPU usage=4.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-07-23 12:08:17] 2025-07-23 16:08:17,139 | INFO     | .. there are 5 such processes running
[2025-07-23 12:08:17] 2025-07-23 16:08:17,139 | INFO     | found 0 job(s) in 20 queues
[2025-07-23 12:08:17] 2025-07-23 16:08:17,139 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-23 12:08:17] 2025-07-23 16:08:17,139 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-23 12:08:17] 2025-07-23 16:08:17,139 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-23 12:08:17] 2025-07-23 16:08:17,140 | CRITICAL | thread 'MainThread' is not alive
[2025-07-23 12:08:17] 2025-07-23 16:08:17,140 | INFO     | [monitor] control thread has ended
[2025-07-23 12:08:17] 2025-07-23 16:08:17,222 [wrapper] ==== pilot stdout END ====
[2025-07-23 12:08:17] 2025-07-23 16:08:17,224 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-23 12:08:17] 2025-07-23 16:08:17,227 [wrapper] pilotpid: 40151
[2025-07-23 12:08:17] 2025-07-23 16:08:17,229 [wrapper] Pilot exit status: 0
[2025-07-23 12:08:17] 2025-07-23 16:08:17,239 [wrapper] pandaids: 6741686158
[2025-07-23 12:08:17] 2025-07-23 16:08:17,273 [wrapper] cleanup supervisor_pilot 15251 40152
[2025-07-23 12:08:17] 2025-07-23 16:08:17,275 [wrapper] Test setup, not cleaning
[2025-07-23 12:08:17] 2025-07-23 16:08:17,278 [wrapper] apfmon messages muted
[2025-07-23 12:08:17] 2025-07-23 16:08:17,280 [wrapper] ==== wrapper stdout END ====
[2025-07-23 12:08:17] 2025-07-23 16:08:17,282 [wrapper] ==== wrapper stderr END ====
[2025-07-23 12:08:17]  *** Error codes and diagnostics ***
[2025-07-23 12:08:17]     "exeErrorCode": 0,
[2025-07-23 12:08:17]     "exeErrorDiag": "",
[2025-07-23 12:08:17]     "pilotErrorCode": 0,
[2025-07-23 12:08:17]     "pilotErrorDiag": "",
[2025-07-23 12:08:17]  *** Listing of results directory ***
[2025-07-23 12:08:17] total 570748
[2025-07-23 12:08:17] -rw-r--r-- 1 boincer umatlas    530466 Jul 21 16:13 pilot3.tar.gz
[2025-07-23 12:08:17] -rw-r--r-- 1 boincer umatlas      5112 Jul 21 16:35 queuedata.json
[2025-07-23 12:08:17] -rwx------ 1 boincer umatlas     36292 Jul 21 16:36 runpilot2-wrapper.sh
[2025-07-23 12:08:17] -rw-r--r-- 1 boincer umatlas       100 Jul 23 09:39 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-23 12:08:17] -rwxr-xr-x 1 boincer umatlas      7986 Jul 23 09:39 run_atlas
[2025-07-23 12:08:17] -rw-r--r-- 1 boincer umatlas       105 Jul 23 09:39 job.xml
[2025-07-23 12:08:17] -rw-r--r-- 2 boincer umatlas 318783274 Jul 23 09:39 EVNT.45697521._000063.pool.root.1
[2025-07-23 12:08:17] -rw-r--r-- 2 boincer umatlas     15095 Jul 23 09:39 start_atlas.sh
[2025-07-23 12:08:17] drwxrwx--x 2 boincer umatlas      4096 Jul 23 09:39 shared
[2025-07-23 12:08:17] -rw-r--r-- 2 boincer umatlas    542895 Jul 23 09:39 input.tar.gz
[2025-07-23 12:08:17] -rw-r--r-- 1 boincer umatlas         0 Jul 23 09:39 boinc_lockfile
[2025-07-23 12:08:17] -rw-r--r-- 1 boincer umatlas      2634 Jul 23 09:39 pandaJob.out
[2025-07-23 12:08:17] -rw------- 1 boincer umatlas    978503 Jul 23 09:39 agis_schedconf.cvmfs.json
[2025-07-23 12:08:17] -rw------- 1 boincer umatlas   1593041 Jul 23 09:39 agis_ddmendpoints.agis.ALL.json
[2025-07-23 12:08:17] drwx------ 4 boincer umatlas      4096 Jul 23 09:39 pilot3
[2025-07-23 12:08:17] -rw-r--r-- 1 boincer umatlas      6228 Jul 23 12:03 init_data.xml
[2025-07-23 12:08:17] -rw------- 1 boincer umatlas 259450356 Jul 23 12:06 HITS.45697523._001564.pool.root.1
[2025-07-23 12:08:17] -rw-r--r-- 1 boincer umatlas       529 Jul 23 12:06 boinc_task_state.xml
[2025-07-23 12:08:17] -rw------- 1 boincer umatlas      1049 Jul 23 12:07 memory_monitor_summary.json
[2025-07-23 12:08:17] -rw------- 1 boincer umatlas        95 Jul 23 12:07 pilot_heartbeat.json
[2025-07-23 12:08:17] -rw------- 1 boincer umatlas    348719 Jul 23 12:07 log.45697523._001564.job.log.tgz.1
[2025-07-23 12:08:17] -rw------- 1 boincer umatlas      7830 Jul 23 12:07 heartbeat.json
[2025-07-23 12:08:17] -rw-r--r-- 1 boincer umatlas      8192 Jul 23 12:08 boinc_mmap_file
[2025-07-23 12:08:17] -rw-r--r-- 1 boincer umatlas        27 Jul 23 12:08 wrapper_checkpoint.txt
[2025-07-23 12:08:17] -rw------- 1 boincer umatlas       890 Jul 23 12:08 pilotlog.txt
[2025-07-23 12:08:17] -rw------- 1 boincer umatlas    823118 Jul 23 12:08 log.45697523._001564.job.log.1
[2025-07-23 12:08:17] -rw------- 1 boincer umatlas       357 Jul 23 12:08 output.list
[2025-07-23 12:08:17] -rw-r--r-- 1 boincer umatlas       620 Jul 23 12:08 runtime_log
[2025-07-23 12:08:17] -rw------- 1 boincer umatlas   1187840 Jul 23 12:08 result.tar.gz
[2025-07-23 12:08:17] -rw------- 1 boincer umatlas       657 Jul 23 12:08 vVELDmdQCy7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmh7FLDmErC0Lm.diag
[2025-07-23 12:08:17] -rw-r--r-- 1 boincer umatlas      8660 Jul 23 12:08 runtime_log.err
[2025-07-23 12:08:17] -rw-r--r-- 1 boincer umatlas     20850 Jul 23 12:08 stderr.txt
[2025-07-23 12:08:17] HITS file was successfully produced:
[2025-07-23 12:08:17] -rw------- 1 boincer umatlas 259450356 Jul 23 12:06 shared/HITS.pool.root.1
[2025-07-23 12:08:17]  *** Contents of shared directory: ***
[2025-07-23 12:08:17] total 566400
[2025-07-23 12:08:17] -rw-r--r-- 2 boincer umatlas 318783274 Jul 23 09:39 ATLAS.root_0
[2025-07-23 12:08:17] -rw-r--r-- 2 boincer umatlas     15095 Jul 23 09:39 start_atlas.sh
[2025-07-23 12:08:17] -rw-r--r-- 2 boincer umatlas    542895 Jul 23 09:39 input.tar.gz
[2025-07-23 12:08:17] -rw------- 1 boincer umatlas 259450356 Jul 23 12:06 HITS.pool.root.1
[2025-07-23 12:08:17] -rw------- 1 boincer umatlas   1187840 Jul 23 12:08 result.tar.gz
12:08:18 (36500): run_atlas exited; CPU time 66631.700915
12:08:18 (36500): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN