Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
09:23:58 (3591588): wrapper (7.7.26015): starting
09:23:58 (3591588): wrapper: running run_atlas (--nthreads 10)
[2025-07-23 09:23:58] Arguments: --nthreads 10
[2025-07-23 09:23:58] Threads: 10
[2025-07-23 09:23:58] Checking for CVMFS
[2025-07-23 09:23:59] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-23 09:23:59] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-23 09:23:59] Running cvmfs_config stat atlas.cern.ch
[2025-07-23 09:24:00] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-23 09:24:00] 2.13.0.0 2209255 12678 263876 148659 0 162 31934424 32935937 15631 16776704 0 45256500 99.513 60779995 30625 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-07-23 09:24:00] CVMFS is ok
[2025-07-23 09:24:00] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-07-23 09:24:00] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-07-23 09:24:00] Further information can be found at the LHC@home message board.
[2025-07-23 09:24:00] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-23 09:24:00] Checking for apptainer binary...
[2025-07-23 09:24:00] Using apptainer found in PATH at /usr/bin/apptainer
[2025-07-23 09:24:00] Running /usr/bin/apptainer --version
[2025-07-23 09:24:00] apptainer version 1.4.1-1.el9
[2025-07-23 09:24:00] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-23 09:24:00] c-5-6.aglt2.org
[2025-07-23 09:24:00] apptainer works
[2025-07-23 09:24:00] Set ATHENA_PROC_NUMBER=10
[2025-07-23 09:24:00] Set ATHENA_CORE_NUMBER=10
[2025-07-23 09:24:00] Starting ATLAS job with PandaID=6741871908
[2025-07-23 09:24:00] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-23 16:22:18]  *** The last 200 lines of the pilot log: ***
[2025-07-23 16:22:18] 2025-07-23 20:21:44,563 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-23 16:22:18] 2025-07-23 20:21:44,799 | INFO     | PID=3595180 has CPU usage=9.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-07-23 16:22:18] 2025-07-23 20:21:44,799 | INFO     | .. there are 20 such processes running
[2025-07-23 16:22:18] 2025-07-23 20:21:44,863 | INFO     | CPU arch script returned: x86-64-v3
[2025-07-23 16:22:18] 2025-07-23 20:21:44,871 | INFO     | found 20 cores (10 cores per socket, 2 sockets) HT, CPU MHz: 2619.8454000000006
[2025-07-23 16:22:18] 2025-07-23 20:21:44,879 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6741871908/memory_monitor_summary.json (trf name=prmon)
[2025-07-23 16:22:18] 2025-07-23 20:21:44,880 | INFO     | extracted standard info from prmon json
[2025-07-23 16:22:18] 2025-07-23 20:21:44,881 | INFO     | extracted standard memory fields from prmon json
[2025-07-23 16:22:18] 2025-07-23 20:21:44,881 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-23 16:22:18] 2025-07-23 20:21:44,882 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-23 16:22:18] 2025-07-23 20:21:44,882 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-23 16:22:18] 2025-07-23 20:21:44,891 | INFO     | fitting pss+swap vs Time
[2025-07-23 16:22:18] 2025-07-23 20:21:44,893 | INFO     | sum of square deviations: 21215632796.890186
[2025-07-23 16:22:18] 2025-07-23 20:21:44,898 | INFO     | sum of deviations: 24140947399.76778
[2025-07-23 16:22:18] 2025-07-23 20:21:44,898 | INFO     | mean x: 1753289593.1002445
[2025-07-23 16:22:18] 2025-07-23 20:21:44,898 | INFO     | mean y: 2343147.322738386
[2025-07-23 16:22:18] 2025-07-23 20:21:44,898 | INFO     | -- intersect: -1992698539.5694606
[2025-07-23 16:22:18] 2025-07-23 20:21:44,899 | INFO     | intersect: -1992698539.5694606
[2025-07-23 16:22:18] 2025-07-23 20:21:44,899 | INFO     | chi2: 3.0467469776926994
[2025-07-23 16:22:18] 2025-07-23 20:21:44,900 | INFO     | sum of square deviations: 20447178885.76233
[2025-07-23 16:22:18] 2025-07-23 20:21:44,905 | INFO     | sum of deviations: 50489712227.82181
[2025-07-23 16:22:18] 2025-07-23 20:21:44,906 | INFO     | mean x: 1753289440.6138613
[2025-07-23 16:22:18] 2025-07-23 20:21:44,906 | INFO     | mean y: 2348330.7103960398
[2025-07-23 16:22:18] 2025-07-23 20:21:44,906 | INFO     | -- intersect: -4327005845.885205
[2025-07-23 16:22:18] 2025-07-23 20:21:44,906 | INFO     | intersect: -4327005845.885205
[2025-07-23 16:22:18] 2025-07-23 20:21:44,907 | INFO     | chi2: 2.380229613161183
[2025-07-23 16:22:18] 2025-07-23 20:21:44,907 | INFO     | current chi2=2.380229613161183 (change=21.876360899396698 %)
[2025-07-23 16:22:18] 2025-07-23 20:21:44,907 | INFO     | right removable region: 403
[2025-07-23 16:22:18] 2025-07-23 20:21:44,908 | INFO     | sum of square deviations: 20446929335.98761
[2025-07-23 16:22:18] 2025-07-23 20:21:44,913 | INFO     | sum of deviations: -46033758333.36632
[2025-07-23 16:22:18] 2025-07-23 20:21:44,914 | INFO     | mean x: 1753289745.611386
[2025-07-23 16:22:18] 2025-07-23 20:21:44,914 | INFO     | mean y: 2357017.297029703
[2025-07-23 16:22:18] 2025-07-23 20:21:44,914 | INFO     | -- intersect: 3949674245.7959485
[2025-07-23 16:22:18] 2025-07-23 20:21:44,914 | INFO     | intersect: 3949674245.7959485
[2025-07-23 16:22:18] 2025-07-23 20:21:44,915 | INFO     | chi2: 1.4248319031471939
[2025-07-23 16:22:18] 2025-07-23 20:21:44,915 | INFO     | current chi2=1.4248319031471939 (change=53.234321275138555 %)
[2025-07-23 16:22:18] 2025-07-23 20:21:44,915 | INFO     | sum of square deviations: 19697016802.982548
[2025-07-23 16:22:18] 2025-07-23 20:21:44,920 | INFO     | sum of deviations: -51517695911.94736
[2025-07-23 16:22:18] 2025-07-23 20:21:44,921 | INFO     | mean x: 1753289898.122807
[2025-07-23 16:22:18] 2025-07-23 20:21:44,921 | INFO     | mean y: 2358119.203007519
[2025-07-23 16:22:18] 2025-07-23 20:21:44,921 | INFO     | -- intersect: 4588101062.941712
[2025-07-23 16:22:18] 2025-07-23 20:21:44,921 | INFO     | intersect: 4588101062.941712
[2025-07-23 16:22:18] 2025-07-23 20:21:44,922 | INFO     | chi2: 1.3852290732559922
[2025-07-23 16:22:18] 2025-07-23 20:21:44,922 | INFO     | current chi2=1.3852290732559922 (change=2.779473831525406 %)
[2025-07-23 16:22:18] 2025-07-23 20:21:44,922 | INFO     | left removable region: 20
[2025-07-23 16:22:18] 2025-07-23 20:21:44,923 | INFO     | sum of square deviations: 17421305649.101883
[2025-07-23 16:22:18] 2025-07-23 20:21:44,927 | INFO     | sum of deviations: 4072961220.968683
[2025-07-23 16:22:18] 2025-07-23 20:21:44,928 | INFO     | mean x: 1753290020.143603
[2025-07-23 16:22:18] 2025-07-23 20:21:44,928 | INFO     | mean y: 2357239.1096605742
[2025-07-23 16:22:18] 2025-07-23 20:21:44,928 | INFO     | -- intersect: -407547873.9163794
[2025-07-23 16:22:18] 2025-07-23 20:21:44,928 | INFO     | intersect: -407547873.9163794
[2025-07-23 16:22:18] 2025-07-23 20:21:44,929 | INFO     | chi2: 0.6130178597784014
[2025-07-23 16:22:18] 2025-07-23 20:21:44,929 | INFO     | -- intersect: -407547873.9163794
[2025-07-23 16:22:18] 2025-07-23 20:21:44,929 | INFO     | current memory leak: 0.23 B/s (using 383 data points, chi2=0.61)
[2025-07-23 16:22:18] 2025-07-23 20:21:44,930 | INFO     | could have reported an average CPU frequency of 2602 MHz (17 samples)
[2025-07-23 16:22:18] 2025-07-23 20:21:44,931 | INFO     | ..............................
[2025-07-23 16:22:18] 2025-07-23 20:21:44,931 | INFO     | . Timing measurements:
[2025-07-23 16:22:18] 2025-07-23 20:21:44,931 | INFO     | . get job = 0 s
[2025-07-23 16:22:18] 2025-07-23 20:21:44,931 | INFO     | . initial setup = 4 s
[2025-07-23 16:22:18] 2025-07-23 20:21:44,931 | INFO     | . payload setup = 23 s
[2025-07-23 16:22:18] 2025-07-23 20:21:44,931 | INFO     | . stage-in = 0 s
[2025-07-23 16:22:18] 2025-07-23 20:21:44,932 | INFO     | . payload execution = 24944 s
[2025-07-23 16:22:18] 2025-07-23 20:21:44,932 | INFO     | . stage-out = 3 s
[2025-07-23 16:22:18] 2025-07-23 20:21:44,932 | INFO     | . log creation = 0 s
[2025-07-23 16:22:18] 2025-07-23 20:21:44,932 | INFO     | ..............................
[2025-07-23 16:22:18] 2025-07-23 20:21:45,058 | INFO     | 
[2025-07-23 16:22:18] 2025-07-23 20:21:45,058 | INFO     | job summary report
[2025-07-23 16:22:18] 2025-07-23 20:21:45,058 | INFO     | --------------------------------------------------
[2025-07-23 16:22:18] 2025-07-23 20:21:45,058 | INFO     | PanDA job id: 6741871908
[2025-07-23 16:22:18] 2025-07-23 20:21:45,058 | INFO     | task id: 45697490
[2025-07-23 16:22:18] 2025-07-23 20:21:45,059 | INFO     | errors: (none)
[2025-07-23 16:22:18] 2025-07-23 20:21:45,059 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-23 16:22:18] 2025-07-23 20:21:45,059 | INFO     | pilot state: finished 
[2025-07-23 16:22:18] 2025-07-23 20:21:45,059 | INFO     | transexitcode: 0
[2025-07-23 16:22:18] 2025-07-23 20:21:45,059 | INFO     | exeerrorcode: 0
[2025-07-23 16:22:18] 2025-07-23 20:21:45,059 | INFO     | exeerrordiag: 
[2025-07-23 16:22:18] 2025-07-23 20:21:45,059 | INFO     | exitcode: 0
[2025-07-23 16:22:18] 2025-07-23 20:21:45,059 | INFO     | exitmsg: OK
[2025-07-23 16:22:18] 2025-07-23 20:21:45,059 | INFO     | cpuconsumptiontime: 80898 s
[2025-07-23 16:22:18] 2025-07-23 20:21:45,060 | INFO     | nevents: 400
[2025-07-23 16:22:18] 2025-07-23 20:21:45,060 | INFO     | neventsw: 0
[2025-07-23 16:22:18] 2025-07-23 20:21:45,060 | INFO     | pid: 3603544
[2025-07-23 16:22:18] 2025-07-23 20:21:45,060 | INFO     | pgrp: 3603544
[2025-07-23 16:22:18] 2025-07-23 20:21:45,060 | INFO     | corecount: 10
[2025-07-23 16:22:18] 2025-07-23 20:21:45,060 | INFO     | event service: False
[2025-07-23 16:22:18] 2025-07-23 20:21:45,060 | INFO     | sizes: {0: 2397333, 1: 2397333, 2: 2397532, 13: 2397560, 16: 2397878, 24: 2397906, 24972: 2433227, 24976: 2442225, 24979: 2442281, 24994: 2442539}
[2025-07-23 16:22:18] 2025-07-23 20:21:45,060 | INFO     | --------------------------------------------------
[2025-07-23 16:22:18] 2025-07-23 20:21:45,060 | INFO     | 
[2025-07-23 16:22:18] 2025-07-23 20:21:45,061 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-07-23 16:22:18] 2025-07-23 20:21:45,085 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-23 16:22:18] 2025-07-23 20:21:45,086 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-23 16:22:18] 2025-07-23 20:21:45,086 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-23 16:22:18] 2025-07-23 20:21:45,086 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-23 16:22:18] 2025-07-23 20:21:45,086 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-23 16:22:18] 2025-07-23 20:21:45,086 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-23 16:22:18] 2025-07-23 20:21:45,086 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-23 16:22:18] 2025-07-23 20:21:45,086 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-23 16:22:18] 2025-07-23 20:21:45,086 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-23 16:22:18] 2025-07-23 20:21:45,087 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-23 16:22:18] 2025-07-23 20:21:45,087 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-23 16:22:18] 2025-07-23 20:21:45,087 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-23 16:22:18] 2025-07-23 20:21:45,087 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-23 16:22:18] 2025-07-23 20:21:45,087 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-23 16:22:18] 2025-07-23 20:21:45,087 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-23 16:22:18] 2025-07-23 20:21:45,087 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-23 16:22:18] 2025-07-23 20:21:45,087 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-23 16:22:18] 2025-07-23 20:21:45,088 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-23 16:22:18] 2025-07-23 20:21:45,088 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-23 16:22:18] 2025-07-23 20:21:45,088 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-23 16:22:18] 2025-07-23 20:21:45,088 | INFO     | job 6741871908 has completed (purged errors)
[2025-07-23 16:22:18] 2025-07-23 20:21:45,088 | INFO     | overall cleanup function is called
[2025-07-23 16:22:18] 2025-07-23 20:21:46,100 | INFO     | --- collectZombieJob: --- 10, [3603544]
[2025-07-23 16:22:18] 2025-07-23 20:21:46,100 | INFO     | zombie collector waiting for pid 3603544
[2025-07-23 16:22:18] 2025-07-23 20:21:46,100 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-23 16:22:18] 2025-07-23 20:21:46,100 | INFO     | collected zombie processes
[2025-07-23 16:22:18] 2025-07-23 20:21:46,101 | INFO     | will attempt to kill all subprocesses of pid=3603544
[2025-07-23 16:22:18] 2025-07-23 20:21:46,483 | INFO     | process IDs to be killed: [3603544] (in reverse order)
[2025-07-23 16:22:18] 2025-07-23 20:21:46,608 | WARNING  | found no corresponding commands to process id(s)
[2025-07-23 16:22:18] 2025-07-23 20:21:46,608 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-23 16:22:18] 2025-07-23 20:21:46,623 | INFO     | did not find any defunct processes belonging to 3603544
[2025-07-23 16:22:18] 2025-07-23 20:21:46,638 | INFO     | did not find any defunct processes belonging to 3603544
[2025-07-23 16:22:18] 2025-07-23 20:21:46,639 | INFO     | ready for new job
[2025-07-23 16:22:18] 2025-07-23 20:21:46,639 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-23 16:22:18] 2025-07-23 20:21:46,641 | INFO     | ***************************************
[2025-07-23 16:22:18] 2025-07-23 20:21:46,642 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-23 16:22:18] 2025-07-23 20:21:46,642 | INFO     | ***************************************
[2025-07-23 16:22:18] 2025-07-23 20:21:46,642 | INFO     | 
[2025-07-23 16:22:18] 2025-07-23 20:21:46,644 | INFO     | architecture information:
[2025-07-23 16:22:18] 2025-07-23 20:21:46,645 | INFO     | executing command: cat /etc/os-release
[2025-07-23 16:22:18] 2025-07-23 20:21:46,664 | INFO     | cat /etc/os-release:
[2025-07-23 16:22:18] NAME="CentOS Linux"
[2025-07-23 16:22:18] VERSION="7 (Core)"
[2025-07-23 16:22:18] ID="centos"
[2025-07-23 16:22:18] ID_LIKE="rhel fedora"
[2025-07-23 16:22:18] VERSION_ID="7"
[2025-07-23 16:22:18] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-23 16:22:18] ANSI_COLOR="0;31"
[2025-07-23 16:22:18] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-23 16:22:18] HOME_URL="https://www.centos.org/"
[2025-07-23 16:22:18] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-23 16:22:18] 
[2025-07-23 16:22:18] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-23 16:22:18] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-23 16:22:18] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-23 16:22:18] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-23 16:22:18] 
[2025-07-23 16:22:18] 2025-07-23 20:21:46,664 | INFO     | ***************************************
[2025-07-23 16:22:18] 2025-07-23 20:21:47,167 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-07-23 16:22:18] 2025-07-23 20:21:47,188 | INFO     | sufficient remaining disk space (76171706368 B)
[2025-07-23 16:22:18] 2025-07-23 20:21:47,188 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-23 16:22:18] 2025-07-23 20:21:47,189 | INFO     | current server update state: UPDATING_FINAL
[2025-07-23 16:22:18] 2025-07-23 20:21:47,189 | INFO     | update_server=False
[2025-07-23 16:22:18] 2025-07-23 20:21:47,189 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-23 16:22:18] 2025-07-23 20:21:47,339 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-23 16:22:18] 2025-07-23 20:21:47,425 | INFO     | all data control threads have been joined
[2025-07-23 16:22:18] 2025-07-23 20:21:48,074 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-23 16:22:18] 2025-07-23 20:21:48,074 | INFO     | aborting loop
[2025-07-23 16:22:18] 2025-07-23 20:21:48,091 | INFO     | all job control threads have been joined
[2025-07-23 16:22:18] 2025-07-23 20:21:48,195 | INFO     | [job] retrieve thread has finished
[2025-07-23 16:22:18] 2025-07-23 20:21:48,224 | INFO     | [payload] execute_payloads thread has finished
[2025-07-23 16:22:18] 2025-07-23 20:21:48,258 | INFO     | all payload control threads have been joined
[2025-07-23 16:22:18] 2025-07-23 20:21:48,327 | INFO     | [job] validate thread has finished
[2025-07-23 16:22:18] 2025-07-23 20:21:48,431 | INFO     | [data] control thread has finished
[2025-07-23 16:22:18] 2025-07-23 20:21:48,614 | INFO     | [payload] validate_post thread has finished
[2025-07-23 16:22:18] 2025-07-23 20:21:49,080 | INFO     | [job] job monitor thread has finished
[2025-07-23 16:22:18] 2025-07-23 20:21:49,097 | INFO     | [job] control thread has finished
[2025-07-23 16:22:18] 2025-07-23 20:21:49,264 | INFO     | [payload] control thread has finished
[2025-07-23 16:22:18] 2025-07-23 20:21:49,349 | INFO     | [data] copytool_out thread has finished
[2025-07-23 16:22:18] 2025-07-23 20:21:49,570 | INFO     | [payload] validate_pre thread has finished
[2025-07-23 16:22:18] 2025-07-23 20:21:49,642 | INFO     | [job] create_data_payload thread has finished
[2025-07-23 16:22:18] 2025-07-23 20:21:49,694 | INFO     | [data] copytool_in thread has finished
[2025-07-23 16:22:18] 2025-07-23 20:21:49,730 | INFO     | [payload] failed_post thread has finished
[2025-07-23 16:22:18] 2025-07-23 20:21:50,072 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-23 16:22:18] 2025-07-23 20:21:50,146 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-23 16:22:18] 2025-07-23 20:21:51,083 | INFO     | [job] queue monitor thread has finished
[2025-07-23 16:22:18] 2025-07-23 20:21:54,156 | INFO     | [data] queue_monitor thread has finished
[2025-07-23 16:22:18] 2025-07-23 20:21:57,636 | INFO     | job.realtimelogging is not enabled
[2025-07-23 16:22:18] 2025-07-23 20:21:58,653 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-23 16:22:18] 2025-07-23 20:22:00,640 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140275914106688)>', '<ExcThread(monitor, started 140274974062336)>']
[2025-07-23 16:22:18] 2025-07-23 20:22:05,669 | INFO     | all workflow threads have been joined
[2025-07-23 16:22:18] 2025-07-23 20:22:05,671 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-23 16:22:18] 2025-07-23 20:22:05,671 | INFO     | traces error code: 0
[2025-07-23 16:22:18] 2025-07-23 20:22:05,672 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-23 16:22:18] 2025-07-23 20:22:17,335 | INFO     | PID=3595180 has CPU usage=3.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-07-23 16:22:18] 2025-07-23 20:22:17,335 | INFO     | .. there are 20 such processes running
[2025-07-23 16:22:18] 2025-07-23 20:22:17,336 | INFO     | found 0 job(s) in 20 queues
[2025-07-23 16:22:18] 2025-07-23 20:22:17,336 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-23 16:22:18] 2025-07-23 20:22:17,337 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-23 16:22:18] 2025-07-23 20:22:17,337 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-23 16:22:18] 2025-07-23 20:22:17,337 | INFO     | [monitor] control thread has ended
[2025-07-23 16:22:18] 2025-07-23 20:22:17,730 [wrapper] ==== pilot stdout END ====
[2025-07-23 16:22:18] 2025-07-23 20:22:17,739 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-23 16:22:18] 2025-07-23 20:22:17,742 [wrapper] pilotpid: 3595180
[2025-07-23 16:22:18] 2025-07-23 20:22:17,749 [wrapper] Pilot exit status: 0
[2025-07-23 16:22:18] 2025-07-23 20:22:17,850 [wrapper] pandaids: 6741871908
[2025-07-23 16:22:18] 2025-07-23 20:22:17,929 [wrapper] cleanup supervisor_pilot  167689 3595181
[2025-07-23 16:22:18] 2025-07-23 20:22:17,940 [wrapper] Test setup, not cleaning
[2025-07-23 16:22:18] 2025-07-23 20:22:17,947 [wrapper] apfmon messages muted
[2025-07-23 16:22:18] 2025-07-23 20:22:17,950 [wrapper] ==== wrapper stdout END ====
[2025-07-23 16:22:18] 2025-07-23 20:22:17,954 [wrapper] ==== wrapper stderr END ====
[2025-07-23 16:22:18]  *** Error codes and diagnostics ***
[2025-07-23 16:22:18]     "exeErrorCode": 0,
[2025-07-23 16:22:18]     "exeErrorDiag": "",
[2025-07-23 16:22:18]     "pilotErrorCode": 0,
[2025-07-23 16:22:18]     "pilotErrorDiag": "",
[2025-07-23 16:22:18]  *** Listing of results directory ***
[2025-07-23 16:22:18] total 646416
[2025-07-23 16:22:18] -rw-r--r--. 1 boincer umatlas    530466 Jul 22 20:24 pilot3.tar.gz
[2025-07-23 16:22:18] -rw-r--r--. 1 boincer umatlas      5112 Jul 22 21:20 queuedata.json
[2025-07-23 16:22:18] -rwx------. 1 boincer umatlas     36292 Jul 22 21:22 runpilot2-wrapper.sh
[2025-07-23 16:22:18] -rw-r--r--. 1 boincer umatlas       100 Jul 23 09:23 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-23 16:22:18] -rwxr-xr-x. 1 boincer umatlas      7986 Jul 23 09:23 run_atlas
[2025-07-23 16:22:18] -rw-r--r--. 1 boincer umatlas       105 Jul 23 09:23 job.xml
[2025-07-23 16:22:18] -rw-r--r--. 2 boincer umatlas 345730488 Jul 23 09:23 EVNT.45697488._000172.pool.root.1
[2025-07-23 16:22:18] -rw-r--r--. 2 boincer umatlas     15095 Jul 23 09:23 start_atlas.sh
[2025-07-23 16:22:18] drwxrwx--x. 2 boincer umatlas      4096 Jul 23 09:23 shared
[2025-07-23 16:22:18] -rw-r--r--. 2 boincer umatlas    542910 Jul 23 09:23 input.tar.gz
[2025-07-23 16:22:18] -rw-r--r--. 1 boincer umatlas         0 Jul 23 09:23 boinc_lockfile
[2025-07-23 16:22:18] -rw-r--r--. 1 boincer umatlas      2590 Jul 23 09:24 pandaJob.out
[2025-07-23 16:22:18] -rw-------. 1 boincer umatlas    978503 Jul 23 09:24 agis_schedconf.cvmfs.json
[2025-07-23 16:22:18] drwx------. 4 boincer umatlas      4096 Jul 23 09:24 pilot3
[2025-07-23 16:22:18] -rw-r--r--. 1 boincer umatlas       532 Jul 23 16:20 boinc_task_state.xml
[2025-07-23 16:22:18] -rw-------. 1 boincer umatlas 307580503 Jul 23 16:20 HITS.45697490._003817.pool.root.1
[2025-07-23 16:22:18] -rw-------. 1 boincer umatlas      1044 Jul 23 16:21 memory_monitor_summary.json
[2025-07-23 16:22:18] -rw-r--r--. 1 boincer umatlas      6655 Jul 23 16:21 init_data.xml
[2025-07-23 16:22:18] -rw-------. 1 boincer umatlas   1593041 Jul 23 16:21 agis_ddmendpoints.agis.ALL.json
[2025-07-23 16:22:18] -rw-------. 1 boincer umatlas    516639 Jul 23 16:21 log.45697490._003817.job.log.tgz.1
[2025-07-23 16:22:18] -rw-------. 1 boincer umatlas      7823 Jul 23 16:21 heartbeat.json
[2025-07-23 16:22:18] -rw-r--r--. 1 boincer umatlas      8192 Jul 23 16:22 boinc_mmap_file
[2025-07-23 16:22:18] -rw-r--r--. 1 boincer umatlas        28 Jul 23 16:22 wrapper_checkpoint.txt
[2025-07-23 16:22:18] -rw-------. 1 boincer umatlas        95 Jul 23 16:22 pilot_heartbeat.json
[2025-07-23 16:22:18] -rw-------. 1 boincer umatlas       823 Jul 23 16:22 pilotlog.txt
[2025-07-23 16:22:18] -rw-------. 1 boincer umatlas   1859349 Jul 23 16:22 log.45697490._003817.job.log.1
[2025-07-23 16:22:18] -rw-------. 1 boincer umatlas       357 Jul 23 16:22 output.list
[2025-07-23 16:22:18] -rw-r--r--. 1 boincer umatlas       620 Jul 23 16:22 runtime_log
[2025-07-23 16:22:18] -rw-------. 1 boincer umatlas   2396160 Jul 23 16:22 result.tar.gz
[2025-07-23 16:22:18] -rw-------. 1 boincer umatlas       655 Jul 23 16:22 xMKNDmSMdy7n9Rq4apOajLDm4fhM0noT9bVof3QYDmjevKDmvINUIn.diag
[2025-07-23 16:22:18] -rw-r--r--. 1 boincer umatlas      8648 Jul 23 16:22 runtime_log.err
[2025-07-23 16:22:18] -rw-r--r--. 1 boincer umatlas     21072 Jul 23 16:22 stderr.txt
[2025-07-23 16:22:18] HITS file was successfully produced:
[2025-07-23 16:22:18] -rw-------. 1 boincer umatlas 307580503 Jul 23 16:20 shared/HITS.pool.root.1
[2025-07-23 16:22:18]  *** Contents of shared directory: ***
[2025-07-23 16:22:18] total 640892
[2025-07-23 16:22:18] -rw-r--r--. 2 boincer umatlas 345730488 Jul 23 09:23 ATLAS.root_0
[2025-07-23 16:22:18] -rw-r--r--. 2 boincer umatlas     15095 Jul 23 09:23 start_atlas.sh
[2025-07-23 16:22:18] -rw-r--r--. 2 boincer umatlas    542910 Jul 23 09:23 input.tar.gz
[2025-07-23 16:22:18] -rw-------. 1 boincer umatlas 307580503 Jul 23 16:20 HITS.pool.root.1
[2025-07-23 16:22:18] -rw-------. 1 boincer umatlas   2396160 Jul 23 16:22 result.tar.gz
16:22:19 (3591588): run_atlas exited; CPU time 81461.836774
16:22:19 (3591588): called boinc_finish(0)

</stderr_txt>
]]>

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