Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
06:14:15 (4109281): wrapper (7.7.26015): starting
06:14:15 (4109281): wrapper: running run_atlas (--nthreads 12)
[2025-07-23 06:14:15] Arguments: --nthreads 12
[2025-07-23 06:14:15] Threads: 12
[2025-07-23 06:14:15] Checking for CVMFS
[2025-07-23 06:14:16] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-23 06:14:16] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-23 06:14:16] Running cvmfs_config stat atlas.cern.ch
[2025-07-23 06:14:16] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-23 06:14:16] 2.11.3.0 1134433 94281 327216 148658 3 643 40766311 45568000 21672 130560 0 1346327693 99.821 757805423 22561 http://cvmfs-s1bnl.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://206.12.9.162:3129 1
[2025-07-23 06:14:16] CVMFS is ok
[2025-07-23 06:14:16] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-07-23 06:14:16] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-07-23 06:14:16] Further information can be found at the LHC@home message board.
[2025-07-23 06:14:16] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-23 06:14:16] Checking for apptainer binary...
[2025-07-23 06:14:16] Using apptainer found in PATH at /usr/bin/apptainer
[2025-07-23 06:14:16] Running /usr/bin/apptainer --version
[2025-07-23 06:14:16] apptainer version 1.3.3-1.el9
[2025-07-23 06:14:16] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-23 06:14:16] WARNING: Environment variable TMPDIR already has value [/home/boinc/slots/0/.apptainertmp], will not forward new value [/home/boinc] from parent process environment wns0171.triumf.lcg
[2025-07-23 06:14:16] apptainer works
[2025-07-23 06:14:16] Set ATHENA_PROC_NUMBER=12
[2025-07-23 06:14:16] Set ATHENA_CORE_NUMBER=12
[2025-07-23 06:14:16] Starting ATLAS job with PandaID=6741891261
[2025-07-23 06:14:16] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-23 06:18:09]  *** The last 200 lines of the pilot log: ***
[2025-07-23 06:18:09] 2025-07-23 13:17:36,914 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-23 06:18:09] 2025-07-23 13:17:36,914 | WARNING  | found no stored workdir sizes
[2025-07-23 06:18:09] 2025-07-23 13:17:36,914 | INFO     | will not add max space = 0 B to job metrics
[2025-07-23 06:18:09] 2025-07-23 13:17:36,914 | WARNING  | wrong length of table data, x=[1753276504.0], y=[941.0] (must be same and length>=4)
[2025-07-23 06:18:09] 2025-07-23 13:17:36,914 | INFO     | could have reported an average CPU frequency of 2874 MHz (4 samples)
[2025-07-23 06:18:09] 2025-07-23 13:17:36,914 | INFO     | ..............................
[2025-07-23 06:18:09] 2025-07-23 13:17:36,914 | INFO     | . Timing measurements:
[2025-07-23 06:18:09] 2025-07-23 13:17:36,914 | INFO     | . get job = 0 s
[2025-07-23 06:18:09] 2025-07-23 13:17:36,914 | INFO     | . initial setup = 2 s
[2025-07-23 06:18:09] 2025-07-23 13:17:36,914 | INFO     | . payload setup = 8 s
[2025-07-23 06:18:09] 2025-07-23 13:17:36,914 | INFO     | . stage-in = 0 s
[2025-07-23 06:18:09] 2025-07-23 13:17:36,914 | INFO     | . payload execution = 31 s
[2025-07-23 06:18:09] 2025-07-23 13:17:36,915 | INFO     | . stage-out = 0 s
[2025-07-23 06:18:09] 2025-07-23 13:17:36,915 | INFO     | . log creation = 0 s
[2025-07-23 06:18:09] 2025-07-23 13:17:36,915 | INFO     | ..............................
[2025-07-23 06:18:09] 2025-07-23 13:17:36,915 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-07-23 06:18:09] 2025-07-23 13:17:36,915 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6741891261/pilotlog.txt
[2025-07-23 06:18:09] 2025-07-23 13:17:36,925 | WARNING  | detected the following tail of warning/fatal messages in the pilot log:
[2025-07-23 06:18:09] - Log from pilotlog.txt -
[2025-07-23 06:18:09] 2025-07-23 13:17:36,913 | INFO     | extracted standard memory fields from prmon json
[2025-07-23 06:18:09] 2025-07-23 13:17:36,913 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-23 06:18:09] 2025-07-23 13:17:36,914 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-23 06:18:09] 2025-07-23 13:17:36,914 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-23 06:18:09] 2025-07-23 13:17:36,914 | WARNING  | found no stored workdir sizes
[2025-07-23 06:18:09] 2025-07-23 13:17:36,914 | INFO     | will not add max space = 0 B to job metrics
[2025-07-23 06:18:09] 2025-07-23 13:17:36,914 | WARNING  | wrong length of table data, x=[1753276504.0], y=[941.0] (must be same and length>=4)
[2025-07-23 06:18:09] 2025-07-23 13:17:36,914 | INFO     | could have reported an average CPU frequency of 2874 MHz (4 samples)
[2025-07-23 06:18:09] 2025-07-23 13:17:36,914 | INFO     | ..............................
[2025-07-23 06:18:09] 2025-07-23 13:17:36,914 | INFO     | . Timing measurements:
[2025-07-23 06:18:09] 2025-07-23 13:17:36,914 | INFO     | . get job = 0 s
[2025-07-23 06:18:09] 2025-07-23 13:17:36,914 | INFO     | . initial setup = 2 s
[2025-07-23 06:18:09] 2025-07-23 13:17:36,914 | INFO     | . payload setup = 8 s
[2025-07-23 06:18:09] 2025-07-23 13:17:36,914 | INFO     | . stage-in = 0 s
[2025-07-23 06:18:09] 2025-07-23 13:17:36,914 | INFO     | . payload execution = 31 s
[2025-07-23 06:18:09] 2025-07-23 13:17:36,915 | INFO     | . stage-out = 0 s
[2025-07-23 06:18:09] 2025-07-23 13:17:36,915 | INFO     | . log creation = 0 s
[2025-07-23 06:18:09] 2025-07-23 13:17:36,915 | INFO     | ..............................
[2025-07-23 06:18:09] 2025-07-23 13:17:36,915 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-07-23 06:18:09] 2025-07-23 13:17:36,915 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6741891261/pilotlog.txt
[2025-07-23 06:18:09] 2025-07-23 13:17:36,925 | WARNING  | 
[2025-07-23 06:18:09] [begin log extracts]
[2025-07-23 06:18:09] - Log from pilotlog.txt -
[2025-07-23 06:18:09] 2025-07-23 13:17:36,913 | INFO     | extracted standard memory fields from prmon json
[2025-07-23 06:18:09] 2025-07-23 13:17:36,913 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-23 06:18:09] 2025-07-23 13:17:36,914 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-23 06:18:09] 2025-07-23 13:17:36,914 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-23 06:18:09] 2025-07-23 13:17:36,914 | WARNING  | found no stored workdir sizes
[2025-07-23 06:18:09] 2025-07-23 13:17:36,914 | INFO     | will not add max space = 0 B to job metrics
[2025-07-23 06:18:09] 2025-07-23 13:17:36,914 | WARNING  | wrong length of table data, x=[1753276504.0], y=[941.0] (must be same and length>=4)
[2025-07-23 06:18:09] 2025-07-23 13:17:36,914 | INFO     | could have reported an average CPU frequency of 2874 MHz (4 samples)
[2025-07-23 06:18:09] 2025-07-23 13:17:36,914 | INFO     | ..............................
[2025-07-23 06:18:09] 2025-07-23 13:17:36,914 | INFO     | . Timing measurements:
[2025-07-23 06:18:09] 2025-07-23 13:17:36,914 | INFO     | . get job = 0 s
[2025-07-23 06:18:09] 2025-07-23 13:17:36,914 | INFO     | . initial setup = 2 s
[2025-07-23 06:18:09] 2025-07-23 13:17:36,914 | INFO     | . payload setup = 8 s
[2025-07-23 06:18:09] 2025-07-23 13:17:36,914 | INFO     | . stage-in = 0 s
[2025-07-23 06:18:09] 2025-07-23 13:17:36,914 | INFO     | . payload execution = 31 s
[2025-07-23 06:18:09] 2025-07-23 13:17:36,915 | INFO     | . stage-out = 0 s
[2025-07-23 06:18:09] 2025-07-23 13:17:36,915 | INFO     | . log creation = 0 s
[2025-07-23 06:18:09] 2025-07-23 13:17:36,915 | INFO     | ..............................
[2025-07-23 06:18:09] 2025-07-23 13:17:36,915 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-07-23 06:18:09] 2025-07-23 13:17:36,915 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6741891261/pilotlog.txt
[2025-07-23 06:18:09] [end log extracts]
[2025-07-23 06:18:09] 2025-07-23 13:17:36,926 | WARNING  | pilotErrorCodes = [1305] (will report primary/first error code)
[2025-07-23 06:18:09] 2025-07-23 13:17:36,926 | WARNING  | pilotErrorDiags = ['Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return c
[2025-07-23 06:18:09] 2025-07-23 13:17:36,977 | INFO     | 
[2025-07-23 06:18:09] 2025-07-23 13:17:36,977 | INFO     | job summary report
[2025-07-23 06:18:09] 2025-07-23 13:17:36,977 | INFO     | --------------------------------------------------
[2025-07-23 06:18:09] 2025-07-23 13:17:36,977 | INFO     | PanDA job id: 6741891261
[2025-07-23 06:18:09] 2025-07-23 13:17:36,977 | INFO     | task id: 45697490
[2025-07-23 06:18:09] 2025-07-23 13:17:36,977 | INFO     | error 1/1: 1305: Failed to execute payload:PyJobTransforms.transform.execute 2025-07-23 06:15:21,473 CRITICAL Transform executor raised TransformValidationExceptio
[2025-07-23 06:18:09] 2025-07-23 13:17:36,977 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-23 06:18:09] 2025-07-23 13:17:36,977 | INFO     | pilot state: failed 
[2025-07-23 06:18:09] 2025-07-23 13:17:36,977 | INFO     | transexitcode: 65
[2025-07-23 06:18:09] 2025-07-23 13:17:36,977 | INFO     | exeerrorcode: 65
[2025-07-23 06:18:09] 2025-07-23 13:17:36,977 | INFO     | exeerrordiag: Non-zero return code from EVNTtoHITS (1)
[2025-07-23 06:18:09] 2025-07-23 13:17:36,977 | INFO     | exitcode: 65
[2025-07-23 06:18:09] 2025-07-23 13:17:36,977 | INFO     | exitmsg: Non-zero return code from EVNTtoHITS (1)
[2025-07-23 06:18:09] 2025-07-23 13:17:36,978 | INFO     | cpuconsumptiontime: 14 s
[2025-07-23 06:18:09] 2025-07-23 13:17:36,978 | INFO     | nevents: 0
[2025-07-23 06:18:09] 2025-07-23 13:17:36,978 | INFO     | neventsw: 0
[2025-07-23 06:18:09] 2025-07-23 13:17:36,978 | INFO     | pid: 4126095
[2025-07-23 06:18:09] 2025-07-23 13:17:36,978 | INFO     | pgrp: 4126095
[2025-07-23 06:18:09] 2025-07-23 13:17:36,978 | INFO     | corecount: 12
[2025-07-23 06:18:09] 2025-07-23 13:17:36,978 | INFO     | event service: False
[2025-07-23 06:18:09] 2025-07-23 13:17:36,978 | INFO     | sizes: {0: 2397500, 6: 2397762, 11: 2397790, 43: 2425518, 45: 2425518, 171: 2425684}
[2025-07-23 06:18:09] 2025-07-23 13:17:36,978 | INFO     | --------------------------------------------------
[2025-07-23 06:18:09] 2025-07-23 13:17:36,978 | INFO     | 
[2025-07-23 06:18:09] 2025-07-23 13:17:36,978 | INFO     | executing command: ls -lF /home/boinc/slots/0
[2025-07-23 06:18:09] 2025-07-23 13:17:36,990 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-23 06:18:09] 2025-07-23 13:17:36,990 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-23 06:18:09] 2025-07-23 13:17:36,990 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-23 06:18:09] 2025-07-23 13:17:36,990 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-23 06:18:09] 2025-07-23 13:17:36,990 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-23 06:18:09] 2025-07-23 13:17:36,990 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-23 06:18:09] 2025-07-23 13:17:36,990 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-23 06:18:09] 2025-07-23 13:17:36,991 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-23 06:18:09] 2025-07-23 13:17:36,991 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-23 06:18:09] 2025-07-23 13:17:36,991 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-23 06:18:09] 2025-07-23 13:17:36,991 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-23 06:18:09] 2025-07-23 13:17:36,991 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-23 06:18:09] 2025-07-23 13:17:36,991 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-23 06:18:09] 2025-07-23 13:17:36,991 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-23 06:18:09] 2025-07-23 13:17:36,991 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-23 06:18:09] 2025-07-23 13:17:36,991 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-23 06:18:09] 2025-07-23 13:17:36,991 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-23 06:18:09] 2025-07-23 13:17:36,991 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-23 06:18:09] 2025-07-23 13:17:36,991 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-23 06:18:09] 2025-07-23 13:17:36,991 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-23 06:18:09] 2025-07-23 13:17:36,991 | INFO     | job 6741891261 has completed (purged errors)
[2025-07-23 06:18:09] 2025-07-23 13:17:36,991 | INFO     | overall cleanup function is called
[2025-07-23 06:18:09] 2025-07-23 13:17:38,003 | INFO     | --- collectZombieJob: --- 10, [4126095]
[2025-07-23 06:18:09] 2025-07-23 13:17:38,003 | INFO     | zombie collector waiting for pid 4126095
[2025-07-23 06:18:09] 2025-07-23 13:17:38,003 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-23 06:18:09] 2025-07-23 13:17:38,003 | INFO     | collected zombie processes
[2025-07-23 06:18:09] 2025-07-23 13:17:38,003 | INFO     | will attempt to kill all subprocesses of pid=4126095
[2025-07-23 06:18:09] 2025-07-23 13:17:38,459 | INFO     | process IDs to be killed: [4126095] (in reverse order)
[2025-07-23 06:18:09] 2025-07-23 13:17:38,539 | WARNING  | found no corresponding commands to process id(s)
[2025-07-23 06:18:09] 2025-07-23 13:17:38,540 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-23 06:18:09] 2025-07-23 13:17:38,547 | INFO     | did not find any defunct processes belonging to 4126095
[2025-07-23 06:18:09] 2025-07-23 13:17:38,555 | INFO     | did not find any defunct processes belonging to 4126095
[2025-07-23 06:18:09] 2025-07-23 13:17:38,555 | INFO     | ready for new job
[2025-07-23 06:18:09] 2025-07-23 13:17:38,555 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-23 06:18:09] 2025-07-23 13:17:38,556 | INFO     | ***************************************
[2025-07-23 06:18:09] 2025-07-23 13:17:38,556 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-23 06:18:09] 2025-07-23 13:17:38,556 | INFO     | ***************************************
[2025-07-23 06:18:09] 2025-07-23 13:17:38,556 | INFO     | 
[2025-07-23 06:18:09] 2025-07-23 13:17:38,573 | INFO     | architecture information:
[2025-07-23 06:18:09] 2025-07-23 13:17:38,587 | INFO     | executing command: cat /etc/os-release
[2025-07-23 06:18:09] 2025-07-23 13:17:38,601 | INFO     | cat /etc/os-release:
[2025-07-23 06:18:09] NAME="CentOS Linux"
[2025-07-23 06:18:09] VERSION="7 (Core)"
[2025-07-23 06:18:09] ID="centos"
[2025-07-23 06:18:09] ID_LIKE="rhel fedora"
[2025-07-23 06:18:09] VERSION_ID="7"
[2025-07-23 06:18:09] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-23 06:18:09] ANSI_COLOR="0;31"
[2025-07-23 06:18:09] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-23 06:18:09] HOME_URL="https://www.centos.org/"
[2025-07-23 06:18:09] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-23 06:18:09] 
[2025-07-23 06:18:09] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-23 06:18:09] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-23 06:18:09] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-23 06:18:09] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-23 06:18:09] 
[2025-07-23 06:18:09] 2025-07-23 13:17:38,602 | INFO     | ***************************************
[2025-07-23 06:18:09] 2025-07-23 13:17:39,116 | INFO     | executing command: df -mP /home/boinc/slots/0
[2025-07-23 06:18:09] 2025-07-23 13:17:39,185 | INFO     | sufficient remaining disk space (1976679006208 B)
[2025-07-23 06:18:09] 2025-07-23 13:17:39,185 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-23 06:18:09] 2025-07-23 13:17:39,185 | INFO     | current server update state: UPDATING_FINAL
[2025-07-23 06:18:09] 2025-07-23 13:17:39,185 | INFO     | update_server=False
[2025-07-23 06:18:09] 2025-07-23 13:17:39,185 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-23 06:18:09] 2025-07-23 13:17:39,185 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-23 06:18:09] 2025-07-23 13:17:39,220 | INFO     | all payload control threads have been joined
[2025-07-23 06:18:09] 2025-07-23 13:17:39,317 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-23 06:18:09] 2025-07-23 13:17:39,317 | INFO     | aborting loop
[2025-07-23 06:18:09] 2025-07-23 13:17:39,463 | INFO     | all data control threads have been joined
[2025-07-23 06:18:09] 2025-07-23 13:17:40,128 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-23 06:18:09] 2025-07-23 13:17:40,190 | INFO     | [job] retrieve thread has finished
[2025-07-23 06:18:09] 2025-07-23 13:17:40,226 | INFO     | [payload] control thread has finished
[2025-07-23 06:18:09] 2025-07-23 13:17:40,249 | INFO     | [job] validate thread has finished
[2025-07-23 06:18:09] 2025-07-23 13:17:40,322 | INFO     | [job] job monitor thread has finished
[2025-07-23 06:18:09] 2025-07-23 13:17:40,376 | INFO     | [job] create_data_payload thread has finished
[2025-07-23 06:18:09] 2025-07-23 13:17:40,412 | INFO     | all job control threads have been joined
[2025-07-23 06:18:09] 2025-07-23 13:17:40,469 | INFO     | [data] control thread has finished
[2025-07-23 06:18:09] 2025-07-23 13:17:40,671 | INFO     | [payload] execute_payloads thread has finished
[2025-07-23 06:18:09] 2025-07-23 13:17:40,687 | INFO     | [payload] validate_pre thread has finished
[2025-07-23 06:18:09] 2025-07-23 13:17:40,854 | INFO     | [data] copytool_in thread has finished
[2025-07-23 06:18:09] 2025-07-23 13:17:41,024 | INFO     | [payload] validate_post thread has finished
[2025-07-23 06:18:09] 2025-07-23 13:17:41,033 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-23 06:18:09] 2025-07-23 13:17:41,418 | INFO     | [job] control thread has finished
[2025-07-23 06:18:09] 2025-07-23 13:17:41,635 | INFO     | [payload] failed_post thread has finished
[2025-07-23 06:18:09] 2025-07-23 13:17:41,991 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-23 06:18:09] 2025-07-23 13:17:42,137 | INFO     | [data] copytool_out thread has finished
[2025-07-23 06:18:09] 2025-07-23 13:17:42,996 | INFO     | [job] queue monitor thread has finished
[2025-07-23 06:18:09] 2025-07-23 13:17:43,192 | INFO     | [data] queue_monitor thread has finished
[2025-07-23 06:18:09] 2025-07-23 13:17:43,562 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139824240858944)>', '<ExcThread(monitor, started 139823700489984)>']
[2025-07-23 06:18:09] 2025-07-23 13:17:48,588 | INFO     | all workflow threads have been joined
[2025-07-23 06:18:09] 2025-07-23 13:17:48,588 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-23 06:18:09] 2025-07-23 13:17:48,588 | INFO     | traces error code: 0
[2025-07-23 06:18:09] 2025-07-23 13:17:48,588 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-23 06:18:09] 2025-07-23 13:18:09,330 | INFO     | PID=4117622 has CPU usage=1.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-07-23 06:18:09] 2025-07-23 13:18:09,331 | INFO     | .. there are 34 such processes running
[2025-07-23 06:18:09] 2025-07-23 13:18:09,331 | INFO     | found 0 job(s) in 20 queues
[2025-07-23 06:18:09] 2025-07-23 13:18:09,331 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-23 06:18:09] 2025-07-23 13:18:09,331 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-23 06:18:09] 2025-07-23 13:18:09,331 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-23 06:18:09] 2025-07-23 13:18:09,331 | CRITICAL | thread 'MainThread' is not alive
[2025-07-23 06:18:09] 2025-07-23 13:18:09,332 | INFO     | [monitor] control thread has ended
[2025-07-23 06:18:09] 2025-07-23 13:18:09,530 [wrapper] ==== pilot stdout END ====
[2025-07-23 06:18:09] 2025-07-23 13:18:09,533 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-23 06:18:09] 2025-07-23 13:18:09,535 [wrapper] pilotpid: 4117622
[2025-07-23 06:18:09] 2025-07-23 13:18:09,536 [wrapper] Pilot exit status: 0
[2025-07-23 06:18:09] 2025-07-23 13:18:09,552 [wrapper] pandaids: 6741891261
[2025-07-23 06:18:09] 2025-07-23 13:18:09,607 [wrapper] cleanup supervisor_pilot 4117648 4117623
[2025-07-23 06:18:09] 2025-07-23 13:18:09,609 [wrapper] Test setup, not cleaning
[2025-07-23 06:18:09] 2025-07-23 13:18:09,611 [wrapper] apfmon messages muted
[2025-07-23 06:18:09] 2025-07-23 13:18:09,612 [wrapper] ==== wrapper stdout END ====
[2025-07-23 06:18:09] 2025-07-23 13:18:09,614 [wrapper] ==== wrapper stderr END ====
[2025-07-23 06:18:09]  *** Error codes and diagnostics ***
[2025-07-23 06:18:09]     "exeErrorCode": 65,
[2025-07-23 06:18:09]     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (1)",
[2025-07-23 06:18:09]     "pilotErrorCode": 1305,
[2025-07-23 06:18:09]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (1)",
[2025-07-23 06:18:09]  *** Listing of results directory ***
[2025-07-23 06:18:09] total 342848
[2025-07-23 06:18:09] -rw-r--r--. 1 boinc boinc    530466 Jul 23 02:39 pilot3.tar.gz
[2025-07-23 06:18:09] -rwx------. 1 boinc boinc     36292 Jul 23 02:40 runpilot2-wrapper.sh
[2025-07-23 06:18:09] -rw-r--r--. 1 boinc boinc      5112 Jul 23 02:40 queuedata.json
[2025-07-23 06:18:09] -rw-r--r--. 1 boinc boinc       100 Jul 23 06:14 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-23 06:18:09] -rwxr-xr-x. 1 boinc boinc      7986 Jul 23 06:14 run_atlas
[2025-07-23 06:18:09] -rw-r--r--. 1 boinc boinc       105 Jul 23 06:14 job.xml
[2025-07-23 06:18:09] -rw-r--r--. 1 boinc boinc      6611 Jul 23 06:14 init_data.xml
[2025-07-23 06:18:09] -rw-r--r--. 2 boinc boinc 347012686 Jul 23 06:14 EVNT.45697488._000220.pool.root.1
[2025-07-23 06:18:09] -rw-r--r--. 2 boinc boinc     15095 Jul 23 06:14 start_atlas.sh
[2025-07-23 06:18:09] drwxrwx--x. 2 boinc boinc      4096 Jul 23 06:14 shared
[2025-07-23 06:18:09] -rw-r--r--. 2 boinc boinc    542897 Jul 23 06:14 input.tar.gz
[2025-07-23 06:18:09] -rw-r--r--. 1 boinc boinc         0 Jul 23 06:14 boinc_lockfile
[2025-07-23 06:18:09] -rw-r--r--. 1 boinc boinc      2589 Jul 23 06:14 pandaJob.out
[2025-07-23 06:18:09] -rw-------. 1 boinc boinc    978437 Jul 23 06:14 agis_schedconf.cvmfs.json
[2025-07-23 06:18:09] -rw-------. 1 boinc boinc   1593041 Jul 23 06:14 agis_ddmendpoints.agis.ALL.json
[2025-07-23 06:18:09] drwx------. 4 boinc boinc      4096 Jul 23 06:14 pilot3
[2025-07-23 06:18:09] -rw-r--r--. 1 boinc boinc       522 Jul 23 06:15 boinc_task_state.xml
[2025-07-23 06:18:09] -rw-------. 1 boinc boinc       989 Jul 23 06:15 memory_monitor_summary.json
[2025-07-23 06:18:09] -rw-------. 1 boinc boinc     20927 Jul 23 06:15 log.45697490._004970.job.log.tgz.1
[2025-07-23 06:18:09] -rw-------. 1 boinc boinc        95 Jul 23 06:17 pilot_heartbeat.json
[2025-07-23 06:18:09] -rw-------. 1 boinc boinc      8414 Jul 23 06:17 heartbeat.json
[2025-07-23 06:18:09] -rw-r--r--. 1 boinc boinc      8192 Jul 23 06:18 boinc_mmap_file
[2025-07-23 06:18:09] -rw-r--r--. 1 boinc boinc        22 Jul 23 06:18 wrapper_checkpoint.txt
[2025-07-23 06:18:09] -rw-------. 1 boinc boinc       893 Jul 23 06:18 pilotlog.txt
[2025-07-23 06:18:09] -rw-------. 1 boinc boinc     76799 Jul 23 06:18 log.45697490._004970.job.log.1
[2025-07-23 06:18:09] -rw-------. 1 boinc boinc       188 Jul 23 06:18 output.list
[2025-07-23 06:18:09] -rw-r--r--. 1 boinc boinc       620 Jul 23 06:18 runtime_log
[2025-07-23 06:18:09] -rw-------. 1 boinc boinc    112640 Jul 23 06:18 result.tar.gz
[2025-07-23 06:18:09] -rw-------. 1 boinc boinc       646 Jul 23 06:18 XFDODmT8ky7n9Rq4apOajLDm4fhM0noT9bVof3QYDmN3vKDmB5YSsm.diag
[2025-07-23 06:18:09] -rw-r--r--. 1 boinc boinc      8650 Jul 23 06:18 runtime_log.err
[2025-07-23 06:18:09] -rw-r--r--. 1 boinc boinc     21785 Jul 23 06:18 stderr.txt
[2025-07-23 06:18:09] No HITS result produced
[2025-07-23 06:18:09]  *** Contents of shared directory: ***
[2025-07-23 06:18:09] total 339544
[2025-07-23 06:18:09] -rw-r--r--. 2 boinc boinc 347012686 Jul 23 06:14 ATLAS.root_0
[2025-07-23 06:18:09] -rw-r--r--. 2 boinc boinc     15095 Jul 23 06:14 start_atlas.sh
[2025-07-23 06:18:09] -rw-r--r--. 2 boinc boinc    542897 Jul 23 06:14 input.tar.gz
[2025-07-23 06:18:09] -rw-------. 1 boinc boinc    112640 Jul 23 06:18 result.tar.gz
06:18:10 (4109281): run_atlas exited; CPU time 19.983994
06:18:10 (4109281): called boinc_finish(0)

</stderr_txt>
]]>

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