Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
05:02:18 (14042): wrapper (7.7.26015): starting
05:02:18 (14042): wrapper: running run_atlas (--nthreads 8)
[2025-07-24 05:02:18] Arguments: --nthreads 8
[2025-07-24 05:02:18] Threads: 8
[2025-07-24 05:02:18] Checking for CVMFS
[2025-07-24 05:02:19] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-24 05:02:20] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-24 05:02:20] Running cvmfs_config stat atlas.cern.ch
[2025-07-24 05:02:21] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-24 05:02:21] 2.11.2.0 5627 104769 140956 148679 2 61 22029962 25165825 4211 130560 0 86668418 99.872 50295157 3866 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-07-24 05:02:21] CVMFS is ok
[2025-07-24 05:02:21] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-24 05:02:21] Checking for apptainer binary...
[2025-07-24 05:02:21] Using apptainer found in PATH at /usr/bin/apptainer
[2025-07-24 05:02:21] Running /usr/bin/apptainer --version
[2025-07-24 05:02:21] apptainer version 1.3.2-1.el7
[2025-07-24 05:02:21] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-24 05:02:22] cg-vwn498.simple-grid.lan
[2025-07-24 05:02:22] apptainer works
[2025-07-24 05:02:22] Set ATHENA_PROC_NUMBER=8
[2025-07-24 05:02:22] Set ATHENA_CORE_NUMBER=8
[2025-07-24 05:02:23] Starting ATLAS job with PandaID=6741870754
[2025-07-24 05:02:23] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/4 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-24 13:54:32]  *** The last 200 lines of the pilot log: ***
[2025-07-24 13:54:32] 2025-07-24 08:58:54,571 | INFO     | sum of square deviations: 12844082682.5
[2025-07-24 13:54:32] 2025-07-24 08:58:54,575 | INFO     | sum of deviations: 48192179408.000015
[2025-07-24 13:54:32] 2025-07-24 08:58:54,575 | INFO     | mean x: 1753336849.5
[2025-07-24 13:54:32] 2025-07-24 08:58:54,575 | INFO     | mean y: 2547843.040462428
[2025-07-24 13:54:32] 2025-07-24 08:58:54,575 | INFO     | -- intersect: -6576133258.79396
[2025-07-24 13:54:32] 2025-07-24 08:58:54,575 | INFO     | intersect: -6576133258.79396
[2025-07-24 13:54:32] 2025-07-24 08:58:54,576 | INFO     | chi2: 2.243923569229711
[2025-07-24 13:54:32] 2025-07-24 08:58:54,577 | INFO     | sum of square deviations: 12295263090.0
[2025-07-24 13:54:32] 2025-07-24 08:58:54,580 | INFO     | sum of deviations: 70693195545.00002
[2025-07-24 13:54:32] 2025-07-24 08:58:54,580 | INFO     | mean x: 1753336697.0
[2025-07-24 13:54:32] 2025-07-24 08:58:54,580 | INFO     | mean y: 2554018.57771261
[2025-07-24 13:54:32] 2025-07-24 08:58:54,580 | INFO     | -- intersect: -10078480691.290007
[2025-07-24 13:54:32] 2025-07-24 08:58:54,580 | INFO     | intersect: -10078480691.290007
[2025-07-24 13:54:32] 2025-07-24 08:58:54,581 | INFO     | chi2: 1.4706922875434876
[2025-07-24 13:54:32] 2025-07-24 08:58:54,581 | INFO     | current chi2=1.4706922875434876 (change=34.45889567226465 %)
[2025-07-24 13:54:32] 2025-07-24 08:58:54,582 | INFO     | sum of square deviations: 11762304260.0
[2025-07-24 13:54:32] 2025-07-24 08:58:54,585 | INFO     | sum of deviations: 69223315694.0
[2025-07-24 13:54:32] 2025-07-24 08:58:54,585 | INFO     | mean x: 1753336544.5
[2025-07-24 13:54:32] 2025-07-24 08:58:54,585 | INFO     | mean y: 2553597.9583333335
[2025-07-24 13:54:32] 2025-07-24 08:58:54,585 | INFO     | -- intersect: -10316153217.890568
[2025-07-24 13:54:32] 2025-07-24 08:58:54,585 | INFO     | intersect: -10316153217.890568
[2025-07-24 13:54:32] 2025-07-24 08:58:54,586 | INFO     | chi2: 1.4709470673290952
[2025-07-24 13:54:32] 2025-07-24 08:58:54,586 | INFO     | current chi2=1.4709470673290952 (change=-0.017323799666698367 %)
[2025-07-24 13:54:32] 2025-07-24 08:58:54,586 | INFO     | right removable region: 335
[2025-07-24 13:54:32] 2025-07-24 08:58:54,586 | INFO     | sum of square deviations: 12295263090.0
[2025-07-24 13:54:32] 2025-07-24 08:58:54,590 | INFO     | sum of deviations: -5874306344.000004
[2025-07-24 13:54:32] 2025-07-24 08:58:54,590 | INFO     | mean x: 1753337002.0
[2025-07-24 13:54:32] 2025-07-24 08:58:54,590 | INFO     | mean y: 2562767.231671554
[2025-07-24 13:54:32] 2025-07-24 08:58:54,590 | INFO     | -- intersect: 840254372.4154161
[2025-07-24 13:54:32] 2025-07-24 08:58:54,590 | INFO     | intersect: 840254372.4154161
[2025-07-24 13:54:32] 2025-07-24 08:58:54,591 | INFO     | chi2: 0.8303535158141514
[2025-07-24 13:54:32] 2025-07-24 08:58:54,591 | INFO     | current chi2=0.8303535158141514 (change=62.99546351753891 %)
[2025-07-24 13:54:32] 2025-07-24 08:58:54,591 | INFO     | sum of square deviations: 11762304260.0
[2025-07-24 13:54:32] 2025-07-24 08:58:54,594 | INFO     | sum of deviations: -15570845665.0
[2025-07-24 13:54:32] 2025-07-24 08:58:54,595 | INFO     | mean x: 1753337154.5
[2025-07-24 13:54:32] 2025-07-24 08:58:54,595 | INFO     | mean y: 2565544.863095238
[2025-07-24 13:54:32] 2025-07-24 08:58:54,595 | INFO     | -- intersect: 2323619449.6045256
[2025-07-24 13:54:32] 2025-07-24 08:58:54,595 | INFO     | intersect: 2323619449.6045256
[2025-07-24 13:54:32] 2025-07-24 08:58:54,595 | INFO     | chi2: 0.7918255260912113
[2025-07-24 13:54:32] 2025-07-24 08:58:54,595 | INFO     | current chi2=0.7918255260912113 (change=4.639950212671035 %)
[2025-07-24 13:54:32] 2025-07-24 08:58:54,596 | INFO     | left removable region: 20
[2025-07-24 13:54:32] 2025-07-24 08:58:54,596 | INFO     | sum of square deviations: 9691828230.0
[2025-07-24 13:54:32] 2025-07-24 08:58:54,602 | INFO     | sum of deviations: 3312724438.0000005
[2025-07-24 13:54:32] 2025-07-24 08:58:54,602 | INFO     | mean x: 1753337124.0
[2025-07-24 13:54:32] 2025-07-24 08:58:54,602 | INFO     | mean y: 2573024.257142857
[2025-07-24 13:54:32] 2025-07-24 08:58:54,602 | INFO     | -- intersect: -596728015.8447036
[2025-07-24 13:54:32] 2025-07-24 08:58:54,602 | INFO     | intersect: -596728015.8447036
[2025-07-24 13:54:32] 2025-07-24 08:58:54,603 | INFO     | chi2: 0.005094827237769605
[2025-07-24 13:54:32] 2025-07-24 08:58:54,603 | INFO     | -- intersect: -596728015.8447036
[2025-07-24 13:54:32] 2025-07-24 08:58:54,603 | INFO     | current memory leak: 0.34 B/s (using 315 data points, chi2=0.01)
[2025-07-24 13:54:32] 2025-07-24 08:58:54,604 | INFO     | could have reported an average CPU frequency of 2249 MHz (14 samples)
[2025-07-24 13:54:32] 2025-07-24 08:58:54,604 | INFO     | ..............................
[2025-07-24 13:54:32] 2025-07-24 08:58:54,604 | INFO     | . Timing measurements:
[2025-07-24 13:54:32] 2025-07-24 08:58:54,604 | INFO     | . get job = 0 s
[2025-07-24 13:54:32] 2025-07-24 08:58:54,604 | INFO     | . initial setup = 2 s
[2025-07-24 13:54:32] 2025-07-24 08:58:54,604 | INFO     | . payload setup = 12 s
[2025-07-24 13:54:32] 2025-07-24 08:58:54,605 | INFO     | . stage-in = 0 s
[2025-07-24 13:54:32] 2025-07-24 08:58:54,605 | INFO     | . payload execution = 21113 s
[2025-07-24 13:54:32] 2025-07-24 08:58:54,605 | INFO     | . stage-out = 2 s
[2025-07-24 13:54:32] 2025-07-24 08:58:54,605 | INFO     | . log creation = 0 s
[2025-07-24 13:54:32] 2025-07-24 08:58:54,605 | INFO     | ..............................
[2025-07-24 13:54:32] 2025-07-24 08:58:54,721 | INFO     | 
[2025-07-24 13:54:32] 2025-07-24 08:58:54,721 | INFO     | job summary report
[2025-07-24 13:54:32] 2025-07-24 08:58:54,721 | INFO     | --------------------------------------------------
[2025-07-24 13:54:32] 2025-07-24 08:58:54,721 | INFO     | PanDA job id: 6741870754
[2025-07-24 13:54:32] 2025-07-24 08:58:54,721 | INFO     | task id: 45697490
[2025-07-24 13:54:32] 2025-07-24 08:58:54,721 | INFO     | errors: (none)
[2025-07-24 13:54:32] 2025-07-24 08:58:54,722 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-24 13:54:32] 2025-07-24 08:58:54,722 | INFO     | pilot state: finished 
[2025-07-24 13:54:32] 2025-07-24 08:58:54,722 | INFO     | transexitcode: 0
[2025-07-24 13:54:32] 2025-07-24 08:58:54,722 | INFO     | exeerrorcode: 0
[2025-07-24 13:54:32] 2025-07-24 08:58:54,722 | INFO     | exeerrordiag: 
[2025-07-24 13:54:32] 2025-07-24 08:58:54,722 | INFO     | exitcode: 0
[2025-07-24 13:54:32] 2025-07-24 08:58:54,722 | INFO     | exitmsg: OK
[2025-07-24 13:54:32] 2025-07-24 08:58:54,722 | INFO     | cpuconsumptiontime: 81374 s
[2025-07-24 13:54:32] 2025-07-24 08:58:54,722 | INFO     | nevents: 400
[2025-07-24 13:54:32] 2025-07-24 08:58:54,722 | INFO     | neventsw: 0
[2025-07-24 13:54:32] 2025-07-24 08:58:54,722 | INFO     | pid: 24602
[2025-07-24 13:54:32] 2025-07-24 08:58:54,722 | INFO     | pgrp: 24602
[2025-07-24 13:54:32] 2025-07-24 08:58:54,722 | INFO     | corecount: 8
[2025-07-24 13:54:32] 2025-07-24 08:58:54,722 | INFO     | event service: False
[2025-07-24 13:54:32] 2025-07-24 08:58:54,723 | INFO     | sizes: {0: 2397333, 1: 2397532, 11: 2397794, 12: 2397822, 21130: 2431040, 21134: 2440038, 21137: 2440222, 21239: 2440416}
[2025-07-24 13:54:32] 2025-07-24 08:58:54,723 | INFO     | --------------------------------------------------
[2025-07-24 13:54:32] 2025-07-24 08:58:54,723 | INFO     | 
[2025-07-24 13:54:32] 2025-07-24 08:58:54,723 | INFO     | executing command: ls -lF /var/lib/boinc/slots/4
[2025-07-24 13:54:32] 2025-07-24 08:58:54,824 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-24 13:54:32] 2025-07-24 08:58:54,824 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-24 13:54:32] 2025-07-24 08:58:54,824 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-24 13:54:32] 2025-07-24 08:58:54,824 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-24 13:54:32] 2025-07-24 08:58:54,824 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-24 13:54:32] 2025-07-24 08:58:54,824 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-24 13:54:32] 2025-07-24 08:58:54,824 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-24 13:54:32] 2025-07-24 08:58:54,824 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-24 13:54:32] 2025-07-24 08:58:54,825 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-24 13:54:32] 2025-07-24 08:58:54,825 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-24 13:54:32] 2025-07-24 08:58:54,825 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-24 13:54:32] 2025-07-24 08:58:54,825 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-24 13:54:32] 2025-07-24 08:58:54,825 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-24 13:54:32] 2025-07-24 08:58:54,825 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-24 13:54:32] 2025-07-24 08:58:54,825 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-24 13:54:32] 2025-07-24 08:58:54,825 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-24 13:54:32] 2025-07-24 08:58:54,825 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-24 13:54:32] 2025-07-24 08:58:54,825 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-24 13:54:32] 2025-07-24 08:58:54,825 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-24 13:54:32] 2025-07-24 08:58:54,825 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-24 13:54:32] 2025-07-24 08:58:54,826 | INFO     | job 6741870754 has completed (purged errors)
[2025-07-24 13:54:32] 2025-07-24 08:58:54,826 | INFO     | overall cleanup function is called
[2025-07-24 13:54:32] 2025-07-24 08:58:55,316 | INFO     | PID=18041 has CPU usage=1.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-07-24 13:54:32] 2025-07-24 08:58:55,316 | INFO     | .. there are 9 such processes running
[2025-07-24 13:54:32] 2025-07-24 08:58:55,834 | INFO     | --- collectZombieJob: --- 10, [24602]
[2025-07-24 13:54:32] 2025-07-24 08:58:55,834 | INFO     | zombie collector waiting for pid 24602
[2025-07-24 13:54:32] 2025-07-24 08:58:55,835 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-24 13:54:32] 2025-07-24 08:58:55,835 | INFO     | collected zombie processes
[2025-07-24 13:54:32] 2025-07-24 08:58:55,835 | INFO     | will attempt to kill all subprocesses of pid=24602
[2025-07-24 13:54:32] 2025-07-24 08:58:55,931 | INFO     | process IDs to be killed: [24602] (in reverse order)
[2025-07-24 13:54:32] 2025-07-24 08:58:56,653 | WARNING  | found no corresponding commands to process id(s)
[2025-07-24 13:54:32] 2025-07-24 08:58:56,653 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-24 13:54:32] 2025-07-24 08:58:56,656 | INFO     | did not find any defunct processes belonging to 24602
[2025-07-24 13:54:32] 2025-07-24 08:58:56,659 | INFO     | did not find any defunct processes belonging to 24602
[2025-07-24 13:54:32] 2025-07-24 08:58:56,659 | INFO     | ready for new job
[2025-07-24 13:54:32] 2025-07-24 08:58:56,660 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-24 13:54:32] 2025-07-24 08:58:56,671 | INFO     | ***************************************
[2025-07-24 13:54:32] 2025-07-24 08:58:56,671 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-24 13:54:32] 2025-07-24 08:58:56,671 | INFO     | ***************************************
[2025-07-24 13:54:32] 2025-07-24 08:58:56,671 | INFO     | 
[2025-07-24 13:54:32] 2025-07-24 08:58:56,672 | INFO     | pilot is running in a VM
[2025-07-24 13:54:32] 2025-07-24 08:58:56,672 | INFO     | architecture information:
[2025-07-24 13:54:32] 2025-07-24 08:58:56,688 | INFO     | executing command: cat /etc/os-release
[2025-07-24 13:54:32] 2025-07-24 08:58:56,807 | INFO     | cat /etc/os-release:
[2025-07-24 13:54:32] NAME="CentOS Linux"
[2025-07-24 13:54:32] VERSION="7 (Core)"
[2025-07-24 13:54:32] ID="centos"
[2025-07-24 13:54:32] ID_LIKE="rhel fedora"
[2025-07-24 13:54:32] VERSION_ID="7"
[2025-07-24 13:54:32] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-24 13:54:32] ANSI_COLOR="0;31"
[2025-07-24 13:54:32] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-24 13:54:32] HOME_URL="https://www.centos.org/"
[2025-07-24 13:54:32] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-24 13:54:32] 
[2025-07-24 13:54:32] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-24 13:54:32] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-24 13:54:32] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-24 13:54:32] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-24 13:54:32] 
[2025-07-24 13:54:32] 2025-07-24 08:58:56,807 | INFO     | ***************************************
[2025-07-24 13:54:32] 2025-07-24 08:58:57,309 | INFO     | executing command: df -mP /var/lib/boinc/slots/4
[2025-07-24 13:54:32] 2025-07-24 08:58:57,528 | INFO     | sufficient remaining disk space (496501784576 B)
[2025-07-24 13:54:32] 2025-07-24 08:58:57,528 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-24 13:54:32] 2025-07-24 08:58:57,529 | INFO     | current server update state: UPDATING_FINAL
[2025-07-24 13:54:32] 2025-07-24 08:58:57,529 | INFO     | update_server=False
[2025-07-24 13:54:32] 2025-07-24 08:58:57,529 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-24 13:54:32] 2025-07-24 08:58:57,529 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-24 13:54:32] 2025-07-24 08:58:57,615 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-24 13:54:32] 2025-07-24 08:58:57,678 | INFO     | all job control threads have been joined
[2025-07-24 13:54:32] 2025-07-24 08:58:57,941 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-07-24 13:54:32] 2025-07-24 08:58:57,942 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-07-24 13:54:32] 2025-07-24 08:58:57,942 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-24 13:54:32] 2025-07-24 08:58:57,942 | INFO     | will abort loop
[2025-07-24 13:54:32] 2025-07-24 08:58:58,018 | INFO     | all data control threads have been joined
[2025-07-24 13:54:32] 2025-07-24 08:58:58,534 | INFO     | [job] retrieve thread has finished
[2025-07-24 13:54:32] 2025-07-24 08:58:58,667 | INFO     | all payload control threads have been joined
[2025-07-24 13:54:32] 2025-07-24 08:58:58,684 | INFO     | [job] control thread has finished
[2025-07-24 13:54:32] 2025-07-24 08:58:58,768 | INFO     | [payload] validate_post thread has finished
[2025-07-24 13:54:32] 2025-07-24 08:58:58,802 | INFO     | [job] validate thread has finished
[2025-07-24 13:54:32] 2025-07-24 08:58:58,936 | INFO     | [data] copytool_in thread has finished
[2025-07-24 13:54:32] 2025-07-24 08:58:58,948 | INFO     | [job] job monitor thread has finished
[2025-07-24 13:54:32] 2025-07-24 08:58:59,024 | INFO     | [data] control thread has finished
[2025-07-24 13:54:32] 2025-07-24 08:58:59,031 | INFO     | [payload] execute_payloads thread has finished
[2025-07-24 13:54:32] 2025-07-24 08:58:59,112 | INFO     | [payload] validate_pre thread has finished
[2025-07-24 13:54:32] 2025-07-24 08:58:59,247 | INFO     | [job] create_data_payload thread has finished
[2025-07-24 13:54:32] 2025-07-24 08:58:59,380 | INFO     | [payload] failed_post thread has finished
[2025-07-24 13:54:32] 2025-07-24 08:58:59,622 | INFO     | [data] copytool_out thread has finished
[2025-07-24 13:54:32] 2025-07-24 08:58:59,673 | INFO     | [payload] control thread has finished
[2025-07-24 13:54:32] 2025-07-24 08:58:59,734 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-24 13:54:32] 2025-07-24 08:58:59,759 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-24 13:54:32] 2025-07-24 08:59:00,740 | INFO     | [job] queue monitor thread has finished
[2025-07-24 13:54:32] 2025-07-24 08:59:01,538 | INFO     | [data] queue_monitor thread has finished
[2025-07-24 13:54:32] 2025-07-24 08:59:02,092 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140139897251648)>', '<ExcThread(monitor, started 140139430909696)>']
[2025-07-24 13:54:32] 2025-07-24 08:59:07,118 | INFO     | all workflow threads have been joined
[2025-07-24 13:54:32] 2025-07-24 08:59:07,118 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-24 13:54:32] 2025-07-24 08:59:07,119 | INFO     | traces error code: 0
[2025-07-24 13:54:32] 2025-07-24 08:59:07,119 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-24 13:54:32] 2025-07-24 08:59:27,472 | INFO     | PID=18041 has CPU usage=0.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-07-24 13:54:32] 2025-07-24 08:59:27,472 | INFO     | .. there are 9 such processes running
[2025-07-24 13:54:32] 2025-07-24 08:59:27,474 | INFO     | found 0 job(s) in 20 queues
[2025-07-24 13:54:32] 2025-07-24 08:59:27,474 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-24 13:54:32] 2025-07-24 08:59:27,474 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-24 13:54:32] 2025-07-24 08:59:27,474 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-24 13:54:32] 2025-07-24 08:59:27,474 | INFO     | [monitor] control thread has ended
[2025-07-24 13:54:32] 2025-07-24 08:59:27,830 [wrapper] ==== pilot stdout END ====
[2025-07-24 13:54:32] 2025-07-24 08:59:27,919 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-24 13:54:32] 2025-07-24 08:59:28,034 [wrapper] pilotpid: 18041
[2025-07-24 13:54:32] 2025-07-24 08:59:28,111 [wrapper] Pilot exit status: 0
[2025-07-24 13:54:32] 2025-07-24 08:59:28,577 [wrapper] pandaids: 6741870754
[2025-07-24 13:54:32] 2025-07-24 08:59:29,435 [wrapper] cleanup supervisor_pilot 26183 18042
[2025-07-24 13:54:32] 2025-07-24 08:59:29,498 [wrapper] Test setup, not cleaning
[2025-07-24 13:54:32] 2025-07-24 08:59:29,593 [wrapper] apfmon messages muted
[2025-07-24 13:54:32] 2025-07-24 08:59:29,673 [wrapper] ==== wrapper stdout END ====
[2025-07-24 13:54:32] 2025-07-24 08:59:29,767 [wrapper] ==== wrapper stderr END ====
[2025-07-24 13:54:32]  *** Error codes and diagnostics ***
[2025-07-24 13:54:32]     "exeErrorCode": 0,
[2025-07-24 13:54:32]     "exeErrorDiag": "",
[2025-07-24 13:54:32]     "pilotErrorCode": 0,
[2025-07-24 13:54:32]     "pilotErrorDiag": "",
[2025-07-24 13:54:32]  *** Listing of results directory ***
[2025-07-24 13:54:32] total 641628
[2025-07-24 13:54:32] -rw-r--r--. 1 boinc boinc    530466 Jul 23 02:24 pilot3.tar.gz
[2025-07-24 13:54:32] -rw-r--r--. 1 boinc boinc      5112 Jul 23 02:55 queuedata.json
[2025-07-24 13:54:32] -rwx------. 1 boinc boinc     36292 Jul 23 02:58 runpilot2-wrapper.sh
[2025-07-24 13:54:32] -rw-r--r--. 1 boinc boinc       100 Jul 24 05:02 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-24 13:54:32] -rwxr-xr-x. 1 boinc boinc      7986 Jul 24 05:02 run_atlas
[2025-07-24 13:54:32] -rw-r--r--. 1 boinc boinc       105 Jul 24 05:02 job.xml
[2025-07-24 13:54:32] -rw-r--r--. 2 boinc boinc 342711368 Jul 24 05:02 EVNT.45697488._000155.pool.root.1
[2025-07-24 13:54:32] -rw-r--r--. 2 boinc boinc     15095 Jul 24 05:02 start_atlas.sh
[2025-07-24 13:54:32] drwxrwx--x. 2 boinc boinc        68 Jul 24 05:02 shared
[2025-07-24 13:54:32] -rw-r--r--. 2 boinc boinc    542910 Jul 24 05:02 input.tar.gz
[2025-07-24 13:54:32] -rw-r--r--. 1 boinc boinc      6391 Jul 24 05:02 init_data.xml
[2025-07-24 13:54:32] -rw-r--r--. 1 boinc boinc         0 Jul 24 05:02 boinc_lockfile
[2025-07-24 13:54:32] -rw-r--r--. 1 boinc boinc      2590 Jul 24 05:02 pandaJob.out
[2025-07-24 13:54:32] -rw-------. 1 boinc boinc    979632 Jul 24 05:04 agis_schedconf.cvmfs.json
[2025-07-24 13:54:32] drwx------. 4 boinc boinc      4096 Jul 24 05:04 pilot3
[2025-07-24 13:54:32] -rw-------. 1 boinc boinc 305920364 Jul 24 10:55 HITS.45697490._003465.pool.root.1
[2025-07-24 13:54:32] -rw-r--r--. 1 boinc boinc       531 Jul 24 10:55 boinc_task_state.xml
[2025-07-24 13:54:32] -rw-------. 1 boinc boinc      1019 Jul 24 10:57 memory_monitor_summary.json
[2025-07-24 13:54:32] -rw-------. 1 boinc boinc   1593041 Jul 24 10:57 agis_ddmendpoints.agis.ALL.json
[2025-07-24 13:54:32] -rw-------. 1 boinc boinc    449559 Jul 24 10:57 log.45697490._003465.job.log.tgz.1
[2025-07-24 13:54:32] -rw-------. 1 boinc boinc      7775 Jul 24 10:58 heartbeat.json
[2025-07-24 13:54:32] -rw-------. 1 boinc boinc        95 Jul 24 10:59 pilot_heartbeat.json
[2025-07-24 13:54:32] -rw-------. 1 boinc boinc       820 Jul 24 10:59 pilotlog.txt
[2025-07-24 13:54:32] -rw-------. 1 boinc boinc   1818832 Jul 24 10:59 log.45697490._003465.job.log.1
[2025-07-24 13:54:32] -rw-------. 1 boinc boinc       357 Jul 24 10:59 output.list
[2025-07-24 13:54:32] -rw-r--r--. 1 boinc boinc       620 Jul 24 10:59 runtime_log
[2025-07-24 13:54:32] -rw-------. 1 boinc boinc   2283520 Jul 24 10:59 result.tar.gz
[2025-07-24 13:54:32] -rw-------. 1 boinc boinc       658 Jul 24 10:59 W8FODm6zcy7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmBZKLDmQ4US8m.diag
[2025-07-24 13:54:32] -rw-r--r--. 1 boinc boinc      8660 Jul 24 10:59 runtime_log.err
[2025-07-24 13:54:32] -rw-r--r--. 1 boinc boinc      8192 Jul 24 13:54 boinc_mmap_file
[2025-07-24 13:54:32] -rw-r--r--. 1 boinc boinc        28 Jul 24 13:54 wrapper_checkpoint.txt
[2025-07-24 13:54:32] -rw-r--r--. 1 boinc boinc     20745 Jul 24 13:54 stderr.txt
[2025-07-24 13:54:33] HITS file was successfully produced:
[2025-07-24 13:54:33] -rw-------. 1 boinc boinc 305920364 Jul 24 10:55 shared/HITS.pool.root.1
[2025-07-24 13:54:33]  *** Contents of shared directory: ***
[2025-07-24 13:54:33] total 636212
[2025-07-24 13:54:33] -rw-r--r--. 2 boinc boinc 342711368 Jul 24 05:02 ATLAS.root_0
[2025-07-24 13:54:33] -rw-r--r--. 2 boinc boinc     15095 Jul 24 05:02 start_atlas.sh
[2025-07-24 13:54:33] -rw-r--r--. 2 boinc boinc    542910 Jul 24 05:02 input.tar.gz
[2025-07-24 13:54:33] -rw-------. 1 boinc boinc 305920364 Jul 24 10:55 HITS.pool.root.1
[2025-07-24 13:54:33] -rw-------. 1 boinc boinc   2283520 Jul 24 10:59 result.tar.gz
13:54:34 (14042): run_atlas exited; CPU time 81637.096529
13:54:34 (14042): called boinc_finish(0)

</stderr_txt>
]]>

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