Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
09:02:24 (1651261): wrapper (7.7.26015): starting
09:02:24 (1651261): wrapper: running run_atlas (--nthreads 8)
[2025-07-23 09:02:24] Arguments: --nthreads 8
[2025-07-23 09:02:24] Threads: 8
[2025-07-23 09:02:24] Checking for CVMFS
[2025-07-23 09:02:24] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-23 09:02:24] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-23 09:02:24] Running cvmfs_config stat atlas.cern.ch
[2025-07-23 09:02:24] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-23 09:02:24] 2.13.1.0 665382 2445 83100 148658 0 188 33100826 40960000 12000 16776704 0 34514769 99.999 87008 56942 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-07-23 09:02:24] CVMFS is ok
[2025-07-23 09:02:24] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-07-23 09:02:24] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-07-23 09:02:24] Further information can be found at the LHC@home message board.
[2025-07-23 09:02:24] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-23 09:02:24] Checking for apptainer binary...
[2025-07-23 09:02:24] Using apptainer found in PATH at /usr/bin/apptainer
[2025-07-23 09:02:24] Running /usr/bin/apptainer --version
[2025-07-23 09:02:24] apptainer version 1.4.1-1.el9
[2025-07-23 09:02:24] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-23 09:02:24] c-208-40.aglt2.org
[2025-07-23 09:02:24] apptainer works
[2025-07-23 09:02:24] Set ATHENA_PROC_NUMBER=8
[2025-07-23 09:02:24] Set ATHENA_CORE_NUMBER=8
[2025-07-23 09:02:24] Starting ATLAS job with PandaID=6741871916
[2025-07-23 09:02:24] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/7 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-23 10:21:56]  *** The last 200 lines of the pilot log: ***
[2025-07-23 10:21:56]  mtime=0
[2025-07-23 10:21:56]  protocol_id=None
[2025-07-23 10:21:56]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-07-23 10:21:56]  replicas=None
[2025-07-23 10:21:56]  scope=mc23_13p6TeV
[2025-07-23 10:21:56]  status=None
[2025-07-23 10:21:56]  status_code=0
[2025-07-23 10:21:56]  storage_token=
[2025-07-23 10:21:56]  surl=/tmp/boinchome/slots/7/PanDA_Pilot-6741871916/log.45697490._003825.job.log.tgz.1
[2025-07-23 10:21:56]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/2b/ce/log.45697490._003825.job.log.tgz.1
[2025-07-23 10:21:56]  workdir=None
[2025-07-23 10:21:56] ]
[2025-07-23 10:21:56] 2025-07-23 14:21:17,769 | INFO     | transferring file log.45697490._003825.job.log.tgz.1 from /tmp/boinchome/slots/7/PanDA_Pilot-6741871916/log.45697490._003825.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-07-23 10:21:56] 2025-07-23 14:21:17,769 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/7/PanDA_Pilot-6741871916/log.45697490._003825.job.log.tgz.1 /tmp/boinchome/slots/7/log.45697490._003825.job
[2025-07-23 10:21:56] 2025-07-23 14:21:17,784 | INFO     | adding to output.list: log.45697490._003825.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/2b/ce/log.45697490._003825.job.log.tg
[2025-07-23 10:21:56] 2025-07-23 14:21:17,785 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-07-23 10:21:56] 2025-07-23 14:21:17,785 | INFO     | summary of transferred files:
[2025-07-23 10:21:56] 2025-07-23 14:21:17,785 | INFO     |  -- lfn=log.45697490._003825.job.log.tgz.1, status_code=0, status=transferred
[2025-07-23 10:21:56] 2025-07-23 14:21:17,785 | INFO     | stage-out finished correctly
[2025-07-23 10:21:56] 2025-07-23 14:21:17,839 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-07-23 10:21:56] 2025-07-23 14:21:18,399 | INFO     | monitor loop #341: job 0:6741871916 is in state 'finished'
[2025-07-23 10:21:56] 2025-07-23 14:21:18,399 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-23 10:21:56] 2025-07-23 14:21:20,656 | INFO     | job 6741871916 has state=finished
[2025-07-23 10:21:56] 2025-07-23 14:21:20,657 | INFO     | preparing for final server update for job 6741871916 in state='finished'
[2025-07-23 10:21:56] 2025-07-23 14:21:20,657 | INFO     | this job has now completed (state=finished)
[2025-07-23 10:21:56] 2025-07-23 14:21:20,657 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-07-23 10:21:56] 2025-07-23 14:21:20,657 | INFO     | log transfer has been attempted: DONE
[2025-07-23 10:21:56] 2025-07-23 14:21:20,657 | INFO     | job 6741871916 has finished - writing final server update
[2025-07-23 10:21:56] 2025-07-23 14:21:20,657 | INFO     | total number of processed events: 400 (read)
[2025-07-23 10:21:56] 2025-07-23 14:21:20,658 | INFO     | executing command: lscpu
[2025-07-23 10:21:56] 2025-07-23 14:21:20,715 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-07-23 10:21:56] 2025-07-23 14:21:20,902 | INFO     | monitor loop #342: job 0:6741871916 is in state 'finished'
[2025-07-23 10:21:56] 2025-07-23 14:21:20,902 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-23 10:21:56] 2025-07-23 14:21:21,616 | INFO     | PID=1655538 has CPU usage=9.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-07-23 10:21:56] 2025-07-23 14:21:21,616 | INFO     | .. there are 14 such processes running
[2025-07-23 10:21:56] 2025-07-23 14:21:23,405 | INFO     | monitor loop #343: job 0:6741871916 is in state 'finished'
[2025-07-23 10:21:56] 2025-07-23 14:21:23,405 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-23 10:21:56] 2025-07-23 14:21:24,156 | INFO     | CPU arch script returned: x86-64-v4
[2025-07-23 10:21:56] 2025-07-23 14:21:24,160 | INFO     | found 64 cores (32 cores per socket, 2 sockets) HT, CPU MHz: 3696.6954296875
[2025-07-23 10:21:56] 2025-07-23 14:21:24,173 | INFO     | using path: /tmp/boinchome/slots/7/PanDA_Pilot-6741871916/memory_monitor_summary.json (trf name=prmon)
[2025-07-23 10:21:56] 2025-07-23 14:21:24,174 | INFO     | extracted standard info from prmon json
[2025-07-23 10:21:56] 2025-07-23 14:21:24,174 | INFO     | extracted standard memory fields from prmon json
[2025-07-23 10:21:56] 2025-07-23 14:21:24,174 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-23 10:21:56] 2025-07-23 14:21:24,175 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-23 10:21:56] 2025-07-23 14:21:24,175 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-23 10:21:56] 2025-07-23 14:21:24,176 | INFO     | fitting pss+swap vs Time
[2025-07-23 10:21:56] 2025-07-23 14:21:24,176 | INFO     | sum of square deviations: 106336877.5
[2025-07-23 10:21:56] 2025-07-23 14:21:24,176 | INFO     | sum of deviations: 693202871.5
[2025-07-23 10:21:56] 2025-07-23 14:21:24,176 | INFO     | mean x: 1753278187.5
[2025-07-23 10:21:56] 2025-07-23 14:21:24,176 | INFO     | mean y: 2573420.3
[2025-07-23 10:21:56] 2025-07-23 14:21:24,176 | INFO     | -- intersect: -11426927827.875315
[2025-07-23 10:21:56] 2025-07-23 14:21:24,176 | INFO     | intersect: -11426927827.875315
[2025-07-23 10:21:56] 2025-07-23 14:21:24,176 | INFO     | chi2: 0.0008263802506582042
[2025-07-23 10:21:56] 2025-07-23 14:21:24,176 | INFO     | -- intersect: -11426927827.875315
[2025-07-23 10:21:56] 2025-07-23 14:21:24,176 | INFO     | current memory leak: 6.52 B/s (using 70 data points, chi2=0.00)
[2025-07-23 10:21:56] 2025-07-23 14:21:24,176 | INFO     | could have reported an average CPU frequency of 3754 MHz (6 samples)
[2025-07-23 10:21:56] 2025-07-23 14:21:24,177 | INFO     | ..............................
[2025-07-23 10:21:56] 2025-07-23 14:21:24,177 | INFO     | . Timing measurements:
[2025-07-23 10:21:56] 2025-07-23 14:21:24,177 | INFO     | . get job = 0 s
[2025-07-23 10:21:56] 2025-07-23 14:21:24,177 | INFO     | . initial setup = 2 s
[2025-07-23 10:21:56] 2025-07-23 14:21:24,177 | INFO     | . payload setup = 5 s
[2025-07-23 10:21:56] 2025-07-23 14:21:24,177 | INFO     | . stage-in = 0 s
[2025-07-23 10:21:56] 2025-07-23 14:21:24,177 | INFO     | . payload execution = 4699 s
[2025-07-23 10:21:56] 2025-07-23 14:21:24,177 | INFO     | . stage-out = 0 s
[2025-07-23 10:21:56] 2025-07-23 14:21:24,177 | INFO     | . log creation = 0 s
[2025-07-23 10:21:56] 2025-07-23 14:21:24,177 | INFO     | ..............................
[2025-07-23 10:21:56] 2025-07-23 14:21:24,544 | INFO     | 
[2025-07-23 10:21:56] 2025-07-23 14:21:24,544 | INFO     | job summary report
[2025-07-23 10:21:56] 2025-07-23 14:21:24,544 | INFO     | --------------------------------------------------
[2025-07-23 10:21:56] 2025-07-23 14:21:24,544 | INFO     | PanDA job id: 6741871916
[2025-07-23 10:21:56] 2025-07-23 14:21:24,544 | INFO     | task id: 45697490
[2025-07-23 10:21:56] 2025-07-23 14:21:24,544 | INFO     | errors: (none)
[2025-07-23 10:21:56] 2025-07-23 14:21:24,544 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-23 10:21:56] 2025-07-23 14:21:24,544 | INFO     | pilot state: finished 
[2025-07-23 10:21:56] 2025-07-23 14:21:24,544 | INFO     | transexitcode: 0
[2025-07-23 10:21:56] 2025-07-23 14:21:24,544 | INFO     | exeerrorcode: 0
[2025-07-23 10:21:56] 2025-07-23 14:21:24,544 | INFO     | exeerrordiag: 
[2025-07-23 10:21:56] 2025-07-23 14:21:24,544 | INFO     | exitcode: 0
[2025-07-23 10:21:56] 2025-07-23 14:21:24,544 | INFO     | exitmsg: OK
[2025-07-23 10:21:56] 2025-07-23 14:21:24,544 | INFO     | cpuconsumptiontime: 34935 s
[2025-07-23 10:21:56] 2025-07-23 14:21:24,545 | INFO     | nevents: 400
[2025-07-23 10:21:56] 2025-07-23 14:21:24,545 | INFO     | neventsw: 0
[2025-07-23 10:21:56] 2025-07-23 14:21:24,545 | INFO     | pid: 1668846
[2025-07-23 10:21:56] 2025-07-23 14:21:24,545 | INFO     | pgrp: 1668846
[2025-07-23 10:21:56] 2025-07-23 14:21:24,545 | INFO     | corecount: 8
[2025-07-23 10:21:56] 2025-07-23 14:21:24,545 | INFO     | event service: False
[2025-07-23 10:21:56] 2025-07-23 14:21:24,545 | INFO     | sizes: {0: 2397504, 3: 2397766, 11: 2397794, 4709: 2424075, 4710: 2433129, 4716: 2433267}
[2025-07-23 10:21:56] 2025-07-23 14:21:24,545 | INFO     | --------------------------------------------------
[2025-07-23 10:21:56] 2025-07-23 14:21:24,545 | INFO     | 
[2025-07-23 10:21:56] 2025-07-23 14:21:24,545 | INFO     | executing command: ls -lF /tmp/boinchome/slots/7
[2025-07-23 10:21:56] 2025-07-23 14:21:24,561 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-23 10:21:56] 2025-07-23 14:21:24,562 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-23 10:21:56] 2025-07-23 14:21:24,562 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-23 10:21:56] 2025-07-23 14:21:24,562 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-23 10:21:56] 2025-07-23 14:21:24,562 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-23 10:21:56] 2025-07-23 14:21:24,562 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-23 10:21:56] 2025-07-23 14:21:24,562 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-23 10:21:56] 2025-07-23 14:21:24,562 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-23 10:21:56] 2025-07-23 14:21:24,562 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-23 10:21:56] 2025-07-23 14:21:24,562 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-23 10:21:56] 2025-07-23 14:21:24,562 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-23 10:21:56] 2025-07-23 14:21:24,562 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-23 10:21:56] 2025-07-23 14:21:24,562 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-23 10:21:56] 2025-07-23 14:21:24,562 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-23 10:21:56] 2025-07-23 14:21:24,562 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-23 10:21:56] 2025-07-23 14:21:24,562 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-23 10:21:56] 2025-07-23 14:21:24,562 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-23 10:21:56] 2025-07-23 14:21:24,562 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-23 10:21:56] 2025-07-23 14:21:24,562 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-23 10:21:56] 2025-07-23 14:21:24,562 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-23 10:21:56] 2025-07-23 14:21:24,563 | INFO     | job 6741871916 has completed (purged errors)
[2025-07-23 10:21:56] 2025-07-23 14:21:24,563 | INFO     | overall cleanup function is called
[2025-07-23 10:21:56] 2025-07-23 14:21:25,570 | INFO     | --- collectZombieJob: --- 10, [1668846]
[2025-07-23 10:21:56] 2025-07-23 14:21:25,570 | INFO     | zombie collector waiting for pid 1668846
[2025-07-23 10:21:56] 2025-07-23 14:21:25,570 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-23 10:21:56] 2025-07-23 14:21:25,570 | INFO     | collected zombie processes
[2025-07-23 10:21:56] 2025-07-23 14:21:25,570 | INFO     | will attempt to kill all subprocesses of pid=1668846
[2025-07-23 10:21:56] 2025-07-23 14:21:25,900 | INFO     | process IDs to be killed: [1668846] (in reverse order)
[2025-07-23 10:21:56] 2025-07-23 14:21:26,017 | WARNING  | found no corresponding commands to process id(s)
[2025-07-23 10:21:56] 2025-07-23 14:21:26,017 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-23 10:21:56] 2025-07-23 14:21:26,035 | INFO     | did not find any defunct processes belonging to 1668846
[2025-07-23 10:21:56] 2025-07-23 14:21:26,051 | INFO     | did not find any defunct processes belonging to 1668846
[2025-07-23 10:21:56] 2025-07-23 14:21:26,051 | INFO     | ready for new job
[2025-07-23 10:21:56] 2025-07-23 14:21:26,051 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-23 10:21:56] 2025-07-23 14:21:26,052 | INFO     | ***************************************
[2025-07-23 10:21:56] 2025-07-23 14:21:26,052 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-23 10:21:56] 2025-07-23 14:21:26,052 | INFO     | ***************************************
[2025-07-23 10:21:56] 2025-07-23 14:21:26,053 | INFO     | 
[2025-07-23 10:21:56] 2025-07-23 14:21:26,057 | INFO     | architecture information:
[2025-07-23 10:21:56] 2025-07-23 14:21:26,057 | INFO     | executing command: cat /etc/os-release
[2025-07-23 10:21:56] 2025-07-23 14:21:26,075 | INFO     | cat /etc/os-release:
[2025-07-23 10:21:56] NAME="CentOS Linux"
[2025-07-23 10:21:56] VERSION="7 (Core)"
[2025-07-23 10:21:56] ID="centos"
[2025-07-23 10:21:56] ID_LIKE="rhel fedora"
[2025-07-23 10:21:56] VERSION_ID="7"
[2025-07-23 10:21:56] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-23 10:21:56] ANSI_COLOR="0;31"
[2025-07-23 10:21:56] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-23 10:21:56] HOME_URL="https://www.centos.org/"
[2025-07-23 10:21:56] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-23 10:21:56] 
[2025-07-23 10:21:56] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-23 10:21:56] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-23 10:21:56] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-23 10:21:56] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-23 10:21:56] 
[2025-07-23 10:21:56] 2025-07-23 14:21:26,075 | INFO     | ***************************************
[2025-07-23 10:21:56] 2025-07-23 14:21:26,578 | INFO     | executing command: df -mP /tmp/boinchome/slots/7
[2025-07-23 10:21:56] 2025-07-23 14:21:26,594 | INFO     | sufficient remaining disk space (160501334016 B)
[2025-07-23 10:21:56] 2025-07-23 14:21:26,594 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-23 10:21:56] 2025-07-23 14:21:26,594 | INFO     | current server update state: UPDATING_FINAL
[2025-07-23 10:21:56] 2025-07-23 14:21:26,594 | INFO     | update_server=False
[2025-07-23 10:21:56] 2025-07-23 14:21:26,594 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-23 10:21:56] 2025-07-23 14:21:26,594 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-23 10:21:56] 2025-07-23 14:21:26,913 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-23 10:21:56] 2025-07-23 14:21:26,913 | INFO     | aborting loop
[2025-07-23 10:21:56] 2025-07-23 14:21:26,941 | INFO     | all payload control threads have been joined
[2025-07-23 10:21:56] 2025-07-23 14:21:26,979 | INFO     | all data control threads have been joined
[2025-07-23 10:21:56] 2025-07-23 14:21:27,597 | INFO     | [job] retrieve thread has finished
[2025-07-23 10:21:56] 2025-07-23 14:21:27,844 | INFO     | all job control threads have been joined
[2025-07-23 10:21:56] 2025-07-23 14:21:27,882 | INFO     | [data] copytool_in thread has finished
[2025-07-23 10:21:56] 2025-07-23 14:21:27,918 | INFO     | [job] job monitor thread has finished
[2025-07-23 10:21:56] 2025-07-23 14:21:27,947 | INFO     | [payload] control thread has finished
[2025-07-23 10:21:56] 2025-07-23 14:21:27,985 | INFO     | [data] control thread has finished
[2025-07-23 10:21:56] 2025-07-23 14:21:28,179 | INFO     | [payload] execute_payloads thread has finished
[2025-07-23 10:21:56] 2025-07-23 14:21:28,408 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-23 10:21:56] 2025-07-23 14:21:28,486 | INFO     | [payload] failed_post thread has finished
[2025-07-23 10:21:56] 2025-07-23 14:21:28,600 | INFO     | [data] copytool_out thread has finished
[2025-07-23 10:21:56] 2025-07-23 14:21:28,621 | INFO     | [job] validate thread has finished
[2025-07-23 10:21:56] 2025-07-23 14:21:28,850 | INFO     | [job] control thread has finished
[2025-07-23 10:21:56] 2025-07-23 14:21:28,889 | INFO     | [payload] validate_pre thread has finished
[2025-07-23 10:21:56] 2025-07-23 14:21:28,997 | INFO     | [payload] validate_post thread has finished
[2025-07-23 10:21:56] 2025-07-23 14:21:29,014 | INFO     | [job] create_data_payload thread has finished
[2025-07-23 10:21:56] 2025-07-23 14:21:29,075 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-23 10:21:56] 2025-07-23 14:21:29,240 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-23 10:21:56] 2025-07-23 14:21:30,241 | INFO     | [job] queue monitor thread has finished
[2025-07-23 10:21:56] 2025-07-23 14:21:32,414 | INFO     | [data] queue_monitor thread has finished
[2025-07-23 10:21:56] 2025-07-23 14:21:33,054 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140627014883136)>', '<ExcThread(monitor, started 140626641262336)>']
[2025-07-23 10:21:56] 2025-07-23 14:21:38,079 | INFO     | all workflow threads have been joined
[2025-07-23 10:21:56] 2025-07-23 14:21:38,079 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-23 10:21:56] 2025-07-23 14:21:38,079 | INFO     | traces error code: 0
[2025-07-23 10:21:56] 2025-07-23 14:21:38,079 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-23 10:21:56] 2025-07-23 14:21:56,109 | INFO     | PID=1655538 has CPU usage=2.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-07-23 10:21:56] 2025-07-23 14:21:56,109 | INFO     | .. there are 15 such processes running
[2025-07-23 10:21:56] 2025-07-23 14:21:56,109 | INFO     | found 0 job(s) in 20 queues
[2025-07-23 10:21:56] 2025-07-23 14:21:56,109 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-23 10:21:56] 2025-07-23 14:21:56,109 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-23 10:21:56] 2025-07-23 14:21:56,109 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-23 10:21:56] 2025-07-23 14:21:56,109 | INFO     | [monitor] control thread has ended
[2025-07-23 10:21:56] 2025-07-23 14:21:56,191 [wrapper] ==== pilot stdout END ====
[2025-07-23 10:21:56] 2025-07-23 14:21:56,194 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-23 10:21:56] 2025-07-23 14:21:56,196 [wrapper] pilotpid: 1655538
[2025-07-23 10:21:56] 2025-07-23 14:21:56,198 [wrapper] Pilot exit status: 0
[2025-07-23 10:21:56] 2025-07-23 14:21:56,205 [wrapper] pandaids: 6741871916
[2025-07-23 10:21:56] 2025-07-23 14:21:56,285 [wrapper] cleanup supervisor_pilot 2026733 1655539
[2025-07-23 10:21:56] 2025-07-23 14:21:56,288 [wrapper] Test setup, not cleaning
[2025-07-23 10:21:56] 2025-07-23 14:21:56,290 [wrapper] apfmon messages muted
[2025-07-23 10:21:56] 2025-07-23 14:21:56,292 [wrapper] ==== wrapper stdout END ====
[2025-07-23 10:21:56] 2025-07-23 14:21:56,294 [wrapper] ==== wrapper stderr END ====
[2025-07-23 10:21:56]  *** Error codes and diagnostics ***
[2025-07-23 10:21:56]     "exeErrorCode": 0,
[2025-07-23 10:21:56]     "exeErrorDiag": "",
[2025-07-23 10:21:56]     "pilotErrorCode": 0,
[2025-07-23 10:21:56]     "pilotErrorDiag": "",
[2025-07-23 10:21:56]  *** Listing of results directory ***
[2025-07-23 10:21:56] total 637536
[2025-07-23 10:21:56] -rw-r--r--. 1 boincer umatlas    530466 Jul 22 20:24 pilot3.tar.gz
[2025-07-23 10:21:56] -rw-r--r--. 1 boincer umatlas      5112 Jul 22 21:15 queuedata.json
[2025-07-23 10:21:56] -rwx------. 1 boincer umatlas     36292 Jul 22 21:19 runpilot2-wrapper.sh
[2025-07-23 10:21:56] -rw-r--r--. 1 boincer umatlas       100 Jul 23 09:02 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-23 10:21:56] -rwxr-xr-x. 1 boincer umatlas      7986 Jul 23 09:02 run_atlas
[2025-07-23 10:21:56] -rw-r--r--. 1 boincer umatlas       105 Jul 23 09:02 job.xml
[2025-07-23 10:21:56] -rw-r--r--. 2 boincer umatlas 345730488 Jul 23 09:02 EVNT.45697488._000172.pool.root.1
[2025-07-23 10:21:56] -rw-r--r--. 2 boincer umatlas     15095 Jul 23 09:02 start_atlas.sh
[2025-07-23 10:21:56] drwxrwx--x. 2 boincer umatlas      4096 Jul 23 09:02 shared
[2025-07-23 10:21:56] -rw-r--r--. 2 boincer umatlas    542912 Jul 23 09:02 input.tar.gz
[2025-07-23 10:21:56] -rw-r--r--. 1 boincer umatlas         0 Jul 23 09:02 boinc_lockfile
[2025-07-23 10:21:56] -rw-r--r--. 1 boincer umatlas      2590 Jul 23 09:02 pandaJob.out
[2025-07-23 10:21:56] -rw-------. 1 boincer umatlas    978437 Jul 23 09:02 agis_schedconf.cvmfs.json
[2025-07-23 10:21:56] -rw-------. 1 boincer umatlas   1593041 Jul 23 09:02 agis_ddmendpoints.agis.ALL.json
[2025-07-23 10:21:56] drwx------. 4 boincer umatlas      4096 Jul 23 09:02 pilot3
[2025-07-23 10:21:56] -rw-------. 1 boincer umatlas 301672325 Jul 23 10:20 HITS.45697490._003825.pool.root.1
[2025-07-23 10:21:56] -rw-r--r--. 1 boincer umatlas       529 Jul 23 10:20 boinc_task_state.xml
[2025-07-23 10:21:56] -rw-------. 1 boincer umatlas        95 Jul 23 10:21 pilot_heartbeat.json
[2025-07-23 10:21:56] -rw-------. 1 boincer umatlas      1030 Jul 23 10:21 memory_monitor_summary.json
[2025-07-23 10:21:56] -rw-------. 1 boincer umatlas    319962 Jul 23 10:21 log.45697490._003825.job.log.tgz.1
[2025-07-23 10:21:56] -rw-------. 1 boincer umatlas      7763 Jul 23 10:21 heartbeat.json
[2025-07-23 10:21:56] -rw-r--r--. 1 boincer umatlas      7172 Jul 23 10:21 init_data.xml
[2025-07-23 10:21:56] -rw-r--r--. 1 boincer umatlas      8192 Jul 23 10:21 boinc_mmap_file
[2025-07-23 10:21:56] -rw-r--r--. 1 boincer umatlas        27 Jul 23 10:21 wrapper_checkpoint.txt
[2025-07-23 10:21:56] -rw-------. 1 boincer umatlas       823 Jul 23 10:21 pilotlog.txt
[2025-07-23 10:21:56] -rw-------. 1 boincer umatlas    461858 Jul 23 10:21 log.45697490._003825.job.log.1
[2025-07-23 10:21:56] -rw-------. 1 boincer umatlas       357 Jul 23 10:21 output.list
[2025-07-23 10:21:56] -rw-r--r--. 1 boincer umatlas       620 Jul 23 10:21 runtime_log
[2025-07-23 10:21:56] -rw-------. 1 boincer umatlas    798720 Jul 23 10:21 result.tar.gz
[2025-07-23 10:21:56] -rw-r--r--. 1 boincer umatlas      8660 Jul 23 10:21 runtime_log.err
[2025-07-23 10:21:56] -rw-------. 1 boincer umatlas       651 Jul 23 10:21 qN9MDmPKdy7n9Rq4apOajLDm4fhM0noT9bVof3QYDmZevKDmzNLMin.diag
[2025-07-23 10:21:56] -rw-r--r--. 1 boincer umatlas     21792 Jul 23 10:21 stderr.txt
[2025-07-23 10:21:56] HITS file was successfully produced:
[2025-07-23 10:21:56] -rw-------. 1 boincer umatlas 301672325 Jul 23 10:20 shared/HITS.pool.root.1
[2025-07-23 10:21:56]  *** Contents of shared directory: ***
[2025-07-23 10:21:56] total 633568
[2025-07-23 10:21:56] -rw-r--r--. 2 boincer umatlas 345730488 Jul 23 09:02 ATLAS.root_0
[2025-07-23 10:21:56] -rw-r--r--. 2 boincer umatlas     15095 Jul 23 09:02 start_atlas.sh
[2025-07-23 10:21:56] -rw-r--r--. 2 boincer umatlas    542912 Jul 23 09:02 input.tar.gz
[2025-07-23 10:21:56] -rw-------. 1 boincer umatlas 301672325 Jul 23 10:20 HITS.pool.root.1
[2025-07-23 10:21:56] -rw-------. 1 boincer umatlas    798720 Jul 23 10:21 result.tar.gz
10:21:57 (1651261): run_atlas exited; CPU time 35036.756342
10:21:57 (1651261): called boinc_finish(0)

</stderr_txt>
]]>

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