Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
08:11:38 (1363756): wrapper (7.7.26015): starting
08:11:38 (1363756): wrapper: running run_atlas (--nthreads 8)
[2025-07-23 08:11:38] Arguments: --nthreads 8
[2025-07-23 08:11:38] Threads: 8
[2025-07-23 08:11:38] Checking for CVMFS
[2025-07-23 08:11:39] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-23 08:11:39] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-23 08:11:39] Running cvmfs_config stat atlas.cern.ch
[2025-07-23 08:11:39] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-23 08:11:39] 2.13.0.0 3822049 12589 152084 148657 2 1064 26573288 40960001 25405 16776704 1 127848548 99.628 125825862 9054 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-07-23 08:11:39] CVMFS is ok
[2025-07-23 08:11:39] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-07-23 08:11:39] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-07-23 08:11:39] Further information can be found at the LHC@home message board.
[2025-07-23 08:11:39] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-23 08:11:39] Checking for apptainer binary...
[2025-07-23 08:11:39] Using apptainer found in PATH at /usr/bin/apptainer
[2025-07-23 08:11:39] Running /usr/bin/apptainer --version
[2025-07-23 08:11:40] apptainer version 1.4.1-1.el9
[2025-07-23 08:11:40] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-23 08:11:41] c8-6-10.aglt2.org
[2025-07-23 08:11:41] apptainer works
[2025-07-23 08:11:41] Set ATHENA_PROC_NUMBER=8
[2025-07-23 08:11:41] Set ATHENA_CORE_NUMBER=8
[2025-07-23 08:11:41] Starting ATLAS job with PandaID=6743009478
[2025-07-23 08:11:41] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-23 09:51:24]  *** The last 200 lines of the pilot log: ***
[2025-07-23 09:51:24]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2025-07-23 09:51:24]  is_altstaged=None
[2025-07-23 09:51:24]  is_tar=False
[2025-07-23 09:51:24]  lfn=log.45697541._005549.job.log.tgz.1
[2025-07-23 09:51:24]  mtime=0
[2025-07-23 09:51:24]  protocol_id=None
[2025-07-23 09:51:24]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-07-23 09:51:24]  replicas=None
[2025-07-23 09:51:24]  scope=mc23_13p6TeV
[2025-07-23 09:51:24]  status=None
[2025-07-23 09:51:24]  status_code=0
[2025-07-23 09:51:24]  storage_token=
[2025-07-23 09:51:24]  surl=/tmp/boinchome/slots/1/PanDA_Pilot-6743009478/log.45697541._005549.job.log.tgz.1
[2025-07-23 09:51:24]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/b0/07/log.45697541._005549.job.log.tgz.1
[2025-07-23 09:51:24]  workdir=None
[2025-07-23 09:51:24] ]
[2025-07-23 09:51:24] 2025-07-23 13:50:43,079 | INFO     | transferring file log.45697541._005549.job.log.tgz.1 from /tmp/boinchome/slots/1/PanDA_Pilot-6743009478/log.45697541._005549.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-07-23 09:51:24] 2025-07-23 13:50:43,079 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/1/PanDA_Pilot-6743009478/log.45697541._005549.job.log.tgz.1 /tmp/boinchome/slots/1/log.45697541._005549.job
[2025-07-23 09:51:24] 2025-07-23 13:50:43,099 | INFO     | adding to output.list: log.45697541._005549.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/b0/07/log.45697541._005549.job.log.tg
[2025-07-23 09:51:24] 2025-07-23 13:50:43,100 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-07-23 09:51:24] 2025-07-23 13:50:43,100 | INFO     | summary of transferred files:
[2025-07-23 09:51:24] 2025-07-23 13:50:43,100 | INFO     |  -- lfn=log.45697541._005549.job.log.tgz.1, status_code=0, status=transferred
[2025-07-23 09:51:24] 2025-07-23 13:50:43,100 | INFO     | stage-out finished correctly
[2025-07-23 09:51:24] 2025-07-23 13:50:43,152 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-07-23 09:51:24] 2025-07-23 13:50:45,998 | INFO     | job 6743009478 has state=finished
[2025-07-23 09:51:24] 2025-07-23 13:50:45,999 | INFO     | preparing for final server update for job 6743009478 in state='finished'
[2025-07-23 09:51:24] 2025-07-23 13:50:45,999 | INFO     | this job has now completed (state=finished)
[2025-07-23 09:51:24] 2025-07-23 13:50:45,999 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-07-23 09:51:24] 2025-07-23 13:50:45,999 | INFO     | log transfer has been attempted: DONE
[2025-07-23 09:51:24] 2025-07-23 13:50:45,999 | INFO     | job 6743009478 has finished - writing final server update
[2025-07-23 09:51:24] 2025-07-23 13:50:45,999 | INFO     | total number of processed events: 400 (read)
[2025-07-23 09:51:24] 2025-07-23 13:50:46,005 | INFO     | executing command: lscpu
[2025-07-23 09:51:24] 2025-07-23 13:50:46,072 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-07-23 09:51:24] 2025-07-23 13:50:48,869 | WARNING  | process 1385666 can no longer be monitored (due to stat problems) - aborting
[2025-07-23 09:51:24] 2025-07-23 13:50:48,870 | INFO     | using path: /tmp/boinchome/slots/1/PanDA_Pilot-6743009478/memory_monitor_summary.json (trf name=prmon)
[2025-07-23 09:51:24] 2025-07-23 13:50:49,247 | INFO     | number of running child processes to parent process 1385666: 1
[2025-07-23 09:51:24] 2025-07-23 13:50:49,247 | INFO     | maximum number of monitored processes: 6
[2025-07-23 09:51:24] 2025-07-23 13:50:51,341 | INFO     | CPU arch script returned: x86-64-v4
[2025-07-23 09:51:24] 2025-07-23 13:50:51,346 | INFO     | found 64 cores (32 cores per socket, 2 sockets) HT, CPU MHz: 3765.5930625000015
[2025-07-23 09:51:24] 2025-07-23 13:50:51,359 | INFO     | using path: /tmp/boinchome/slots/1/PanDA_Pilot-6743009478/memory_monitor_summary.json (trf name=prmon)
[2025-07-23 09:51:24] 2025-07-23 13:50:51,360 | INFO     | extracted standard info from prmon json
[2025-07-23 09:51:24] 2025-07-23 13:50:51,360 | INFO     | extracted standard memory fields from prmon json
[2025-07-23 09:51:24] 2025-07-23 13:50:51,360 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-23 09:51:24] 2025-07-23 13:50:51,360 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-23 09:51:24] 2025-07-23 13:50:51,360 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-23 09:51:24] 2025-07-23 13:50:51,362 | INFO     | fitting pss+swap vs Time
[2025-07-23 09:51:24] 2025-07-23 13:50:51,362 | INFO     | sum of square deviations: 218571540.0
[2025-07-23 09:51:24] 2025-07-23 13:50:51,362 | INFO     | sum of deviations: -721340676.9999999
[2025-07-23 09:51:24] 2025-07-23 13:50:51,362 | INFO     | mean x: 1753275780.0
[2025-07-23 09:51:24] 2025-07-23 13:50:51,362 | INFO     | mean y: 2391112.2921348317
[2025-07-23 09:51:24] 2025-07-23 13:50:51,362 | INFO     | -- intersect: 5788639121.126693
[2025-07-23 09:51:24] 2025-07-23 13:50:51,362 | INFO     | intersect: 5788639121.126693
[2025-07-23 09:51:24] 2025-07-23 13:50:51,363 | INFO     | chi2: 0.030333967343300915
[2025-07-23 09:51:24] 2025-07-23 13:50:51,363 | INFO     | -- intersect: 5788639121.126693
[2025-07-23 09:51:24] 2025-07-23 13:50:51,363 | INFO     | current memory leak: -3.30 B/s (using 89 data points, chi2=0.03)
[2025-07-23 09:51:24] 2025-07-23 13:50:51,363 | INFO     | could have reported an average CPU frequency of 3785 MHz (7 samples)
[2025-07-23 09:51:24] 2025-07-23 13:50:51,363 | INFO     | ..............................
[2025-07-23 09:51:24] 2025-07-23 13:50:51,363 | INFO     | . Timing measurements:
[2025-07-23 09:51:24] 2025-07-23 13:50:51,363 | INFO     | . get job = 0 s
[2025-07-23 09:51:24] 2025-07-23 13:50:51,363 | INFO     | . initial setup = 4 s
[2025-07-23 09:51:24] 2025-07-23 13:50:51,363 | INFO     | . payload setup = 10 s
[2025-07-23 09:51:24] 2025-07-23 13:50:51,363 | INFO     | . stage-in = 0 s
[2025-07-23 09:51:24] 2025-07-23 13:50:51,363 | INFO     | . payload execution = 5854 s
[2025-07-23 09:51:24] 2025-07-23 13:50:51,363 | INFO     | . stage-out = 0 s
[2025-07-23 09:51:24] 2025-07-23 13:50:51,363 | INFO     | . log creation = 0 s
[2025-07-23 09:51:24] 2025-07-23 13:50:51,363 | INFO     | ..............................
[2025-07-23 09:51:24] 2025-07-23 13:50:51,418 | INFO     | 
[2025-07-23 09:51:24] 2025-07-23 13:50:51,418 | INFO     | job summary report
[2025-07-23 09:51:24] 2025-07-23 13:50:51,418 | INFO     | --------------------------------------------------
[2025-07-23 09:51:24] 2025-07-23 13:50:51,418 | INFO     | PanDA job id: 6743009478
[2025-07-23 09:51:24] 2025-07-23 13:50:51,418 | INFO     | task id: 45697541
[2025-07-23 09:51:24] 2025-07-23 13:50:51,418 | INFO     | errors: (none)
[2025-07-23 09:51:24] 2025-07-23 13:50:51,418 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-23 09:51:24] 2025-07-23 13:50:51,418 | INFO     | pilot state: finished 
[2025-07-23 09:51:24] 2025-07-23 13:50:51,418 | INFO     | transexitcode: 0
[2025-07-23 09:51:24] 2025-07-23 13:50:51,418 | INFO     | exeerrorcode: 0
[2025-07-23 09:51:24] 2025-07-23 13:50:51,418 | INFO     | exeerrordiag: 
[2025-07-23 09:51:24] 2025-07-23 13:50:51,418 | INFO     | exitcode: 0
[2025-07-23 09:51:24] 2025-07-23 13:50:51,418 | INFO     | exitmsg: OK
[2025-07-23 09:51:24] 2025-07-23 13:50:51,418 | INFO     | cpuconsumptiontime: 36751 s
[2025-07-23 09:51:24] 2025-07-23 13:50:51,418 | INFO     | nevents: 400
[2025-07-23 09:51:24] 2025-07-23 13:50:51,418 | INFO     | neventsw: 0
[2025-07-23 09:51:24] 2025-07-23 13:50:51,418 | INFO     | pid: 1385666
[2025-07-23 09:51:24] 2025-07-23 13:50:51,419 | INFO     | pgrp: 1385666
[2025-07-23 09:51:24] 2025-07-23 13:50:51,419 | INFO     | corecount: 8
[2025-07-23 09:51:24] 2025-07-23 13:50:51,419 | INFO     | event service: False
[2025-07-23 09:51:24] 2025-07-23 13:50:51,419 | INFO     | sizes: {0: 2397337, 1: 2397536, 11: 2397536, 13: 2397826, 22: 2397882, 5868: 2424826, 5869: 2433880, 5877: 2434018}
[2025-07-23 09:51:24] 2025-07-23 13:50:51,419 | INFO     | --------------------------------------------------
[2025-07-23 09:51:24] 2025-07-23 13:50:51,419 | INFO     | 
[2025-07-23 09:51:24] 2025-07-23 13:50:51,419 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2025-07-23 09:51:24] 2025-07-23 13:50:51,436 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-23 09:51:24] 2025-07-23 13:50:51,436 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-23 09:51:24] 2025-07-23 13:50:51,436 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-23 09:51:24] 2025-07-23 13:50:51,436 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-23 09:51:24] 2025-07-23 13:50:51,437 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-23 09:51:24] 2025-07-23 13:50:51,437 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-23 09:51:24] 2025-07-23 13:50:51,437 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-23 09:51:24] 2025-07-23 13:50:51,437 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-23 09:51:24] 2025-07-23 13:50:51,437 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-23 09:51:24] 2025-07-23 13:50:51,437 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-23 09:51:24] 2025-07-23 13:50:51,437 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-23 09:51:24] 2025-07-23 13:50:51,437 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-23 09:51:24] 2025-07-23 13:50:51,437 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-23 09:51:24] 2025-07-23 13:50:51,437 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-23 09:51:24] 2025-07-23 13:50:51,437 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-23 09:51:24] 2025-07-23 13:50:51,437 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-23 09:51:24] 2025-07-23 13:50:51,437 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-23 09:51:24] 2025-07-23 13:50:51,437 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-23 09:51:24] 2025-07-23 13:50:51,437 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-23 09:51:24] 2025-07-23 13:50:51,437 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-23 09:51:24] 2025-07-23 13:50:51,437 | INFO     | job 6743009478 has completed (purged errors)
[2025-07-23 09:51:24] 2025-07-23 13:50:51,437 | INFO     | overall cleanup function is called
[2025-07-23 09:51:24] 2025-07-23 13:50:52,454 | INFO     | --- collectZombieJob: --- 10, [1385666]
[2025-07-23 09:51:24] 2025-07-23 13:50:52,454 | INFO     | zombie collector waiting for pid 1385666
[2025-07-23 09:51:24] 2025-07-23 13:50:52,454 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-23 09:51:24] 2025-07-23 13:50:52,454 | INFO     | collected zombie processes
[2025-07-23 09:51:24] 2025-07-23 13:50:52,454 | INFO     | will attempt to kill all subprocesses of pid=1385666
[2025-07-23 09:51:24] 2025-07-23 13:50:52,860 | INFO     | process IDs to be killed: [1385666] (in reverse order)
[2025-07-23 09:51:24] 2025-07-23 13:50:52,994 | WARNING  | found no corresponding commands to process id(s)
[2025-07-23 09:51:24] 2025-07-23 13:50:52,994 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-23 09:51:24] 2025-07-23 13:50:53,017 | INFO     | did not find any defunct processes belonging to 1385666
[2025-07-23 09:51:24] 2025-07-23 13:50:53,040 | INFO     | did not find any defunct processes belonging to 1385666
[2025-07-23 09:51:24] 2025-07-23 13:50:53,040 | INFO     | ready for new job
[2025-07-23 09:51:24] 2025-07-23 13:50:53,040 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-23 09:51:24] 2025-07-23 13:50:53,041 | INFO     | ***************************************
[2025-07-23 09:51:24] 2025-07-23 13:50:53,042 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-23 09:51:24] 2025-07-23 13:50:53,042 | INFO     | ***************************************
[2025-07-23 09:51:24] 2025-07-23 13:50:53,042 | INFO     | 
[2025-07-23 09:51:24] 2025-07-23 13:50:53,059 | INFO     | architecture information:
[2025-07-23 09:51:24] 2025-07-23 13:50:53,060 | INFO     | executing command: cat /etc/os-release
[2025-07-23 09:51:24] 2025-07-23 13:50:53,073 | INFO     | cat /etc/os-release:
[2025-07-23 09:51:24] NAME="CentOS Linux"
[2025-07-23 09:51:24] VERSION="7 (Core)"
[2025-07-23 09:51:24] ID="centos"
[2025-07-23 09:51:24] ID_LIKE="rhel fedora"
[2025-07-23 09:51:24] VERSION_ID="7"
[2025-07-23 09:51:24] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-23 09:51:24] ANSI_COLOR="0;31"
[2025-07-23 09:51:24] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-23 09:51:24] HOME_URL="https://www.centos.org/"
[2025-07-23 09:51:24] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-23 09:51:24] 
[2025-07-23 09:51:24] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-23 09:51:24] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-23 09:51:24] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-23 09:51:24] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-23 09:51:24] 
[2025-07-23 09:51:24] 2025-07-23 13:50:53,073 | INFO     | ***************************************
[2025-07-23 09:51:24] 2025-07-23 13:50:53,576 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2025-07-23 09:51:24] 2025-07-23 13:50:53,590 | INFO     | sufficient remaining disk space (170670424064 B)
[2025-07-23 09:51:24] 2025-07-23 13:50:53,591 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-23 09:51:24] 2025-07-23 13:50:53,591 | INFO     | current server update state: UPDATING_FINAL
[2025-07-23 09:51:24] 2025-07-23 13:50:53,591 | INFO     | update_server=False
[2025-07-23 09:51:24] 2025-07-23 13:50:53,591 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-23 09:51:24] 2025-07-23 13:50:53,591 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-23 09:51:24] 2025-07-23 13:50:53,591 | INFO     | aborting loop
[2025-07-23 09:51:24] 2025-07-23 13:50:53,665 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-23 09:51:24] 2025-07-23 13:50:53,711 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-23 09:51:24] 2025-07-23 13:50:54,549 | INFO     | all data control threads have been joined
[2025-07-23 09:51:24] 2025-07-23 13:50:54,595 | INFO     | [job] retrieve thread has finished
[2025-07-23 09:51:24] 2025-07-23 13:50:54,596 | INFO     | [job] job monitor thread has finished
[2025-07-23 09:51:24] 2025-07-23 13:50:54,662 | INFO     | [payload] validate_pre thread has finished
[2025-07-23 09:51:24] 2025-07-23 13:50:54,671 | INFO     | [job] validate thread has finished
[2025-07-23 09:51:24] 2025-07-23 13:50:54,867 | INFO     | all job control threads have been joined
[2025-07-23 09:51:24] 2025-07-23 13:50:54,936 | INFO     | [data] copytool_in thread has finished
[2025-07-23 09:51:24] 2025-07-23 13:50:54,995 | INFO     | [payload] execute_payloads thread has finished
[2025-07-23 09:51:24] 2025-07-23 13:50:55,051 | INFO     | all payload control threads have been joined
[2025-07-23 09:51:24] 2025-07-23 13:50:55,190 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-23 09:51:24] 2025-07-23 13:50:55,554 | INFO     | [data] control thread has finished
[2025-07-23 09:51:24] 2025-07-23 13:50:55,565 | INFO     | [job] create_data_payload thread has finished
[2025-07-23 09:51:24] 2025-07-23 13:50:55,671 | INFO     | [data] copytool_out thread has finished
[2025-07-23 09:51:24] 2025-07-23 13:50:55,852 | INFO     | [payload] validate_post thread has finished
[2025-07-23 09:51:24] 2025-07-23 13:50:55,872 | INFO     | [job] control thread has finished
[2025-07-23 09:51:24] 2025-07-23 13:50:55,909 | INFO     | [payload] failed_post thread has finished
[2025-07-23 09:51:24] 2025-07-23 13:50:56,056 | INFO     | [payload] control thread has finished
[2025-07-23 09:51:24] 2025-07-23 13:50:56,429 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-23 09:51:24] 2025-07-23 13:50:57,434 | INFO     | [job] queue monitor thread has finished
[2025-07-23 09:51:24] 2025-07-23 13:50:57,717 | INFO     | [data] queue_monitor thread has finished
[2025-07-23 09:51:24] 2025-07-23 13:50:58,724 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140317870872384)>', '<ExcThread(monitor, started 140317244253952)>']
[2025-07-23 09:51:24] 2025-07-23 13:51:03,732 | INFO     | all workflow threads have been joined
[2025-07-23 09:51:24] 2025-07-23 13:51:03,732 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-23 09:51:24] 2025-07-23 13:51:03,732 | INFO     | traces error code: 0
[2025-07-23 09:51:24] 2025-07-23 13:51:03,732 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-23 09:51:24] 2025-07-23 13:51:24,052 | INFO     | PID=1372282 has CPU usage=6.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-07-23 09:51:24] 2025-07-23 13:51:24,053 | INFO     | .. there are 32 such processes running
[2025-07-23 09:51:24] 2025-07-23 13:51:24,053 | INFO     | found 0 job(s) in 20 queues
[2025-07-23 09:51:24] 2025-07-23 13:51:24,054 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-23 09:51:24] 2025-07-23 13:51:24,054 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-23 09:51:24] 2025-07-23 13:51:24,054 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-23 09:51:24] 2025-07-23 13:51:24,054 | INFO     | [monitor] control thread has ended
[2025-07-23 09:51:24] 2025-07-23 13:51:24,342 [wrapper] ==== pilot stdout END ====
[2025-07-23 09:51:24] 2025-07-23 13:51:24,344 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-23 09:51:24] 2025-07-23 13:51:24,350 [wrapper] pilotpid: 1372282
[2025-07-23 09:51:24] 2025-07-23 13:51:24,360 [wrapper] Pilot exit status: 0
[2025-07-23 09:51:24] 2025-07-23 13:51:24,399 [wrapper] pandaids: 6743009478
[2025-07-23 09:51:24] 2025-07-23 13:51:24,518 [wrapper] cleanup supervisor_pilot 2195418 1372283
[2025-07-23 09:51:24] 2025-07-23 13:51:24,521 [wrapper] Test setup, not cleaning
[2025-07-23 09:51:24] 2025-07-23 13:51:24,524 [wrapper] apfmon messages muted
[2025-07-23 09:51:24] 2025-07-23 13:51:24,527 [wrapper] ==== wrapper stdout END ====
[2025-07-23 09:51:24] 2025-07-23 13:51:24,528 [wrapper] ==== wrapper stderr END ====
[2025-07-23 09:51:24]  *** Error codes and diagnostics ***
[2025-07-23 09:51:24]     "exeErrorCode": 0,
[2025-07-23 09:51:24]     "exeErrorDiag": "",
[2025-07-23 09:51:24]     "pilotErrorCode": 0,
[2025-07-23 09:51:24]     "pilotErrorDiag": "",
[2025-07-23 09:51:24]  *** Listing of results directory ***
[2025-07-23 09:51:24] total 641864
[2025-07-23 09:51:24] -rw-r--r--. 1 boincer umatlas    530466 Jul 23 00:19 pilot3.tar.gz
[2025-07-23 09:51:24] -rw-r--r--. 1 boincer umatlas      5112 Jul 23 00:20 queuedata.json
[2025-07-23 09:51:24] -rwx------. 1 boincer umatlas     36292 Jul 23 00:21 runpilot2-wrapper.sh
[2025-07-23 09:51:24] -rw-r--r--. 1 boincer umatlas       100 Jul 23 08:11 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-23 09:51:24] -rwxr-xr-x. 1 boincer umatlas      7986 Jul 23 08:11 run_atlas
[2025-07-23 09:51:24] -rw-r--r--. 1 boincer umatlas       105 Jul 23 08:11 job.xml
[2025-07-23 09:51:24] -rw-r--r--. 2 boincer umatlas 343618728 Jul 23 08:11 EVNT.45697539._000188.pool.root.1
[2025-07-23 09:51:24] -rw-r--r--. 2 boincer umatlas     15095 Jul 23 08:11 start_atlas.sh
[2025-07-23 09:51:24] drwxrwx--x. 2 boincer umatlas      4096 Jul 23 08:11 shared
[2025-07-23 09:51:24] -rw-r--r--. 2 boincer umatlas    542893 Jul 23 08:11 input.tar.gz
[2025-07-23 09:51:24] -rw-r--r--. 1 boincer umatlas         0 Jul 23 08:11 boinc_lockfile
[2025-07-23 09:51:24] -rw-r--r--. 1 boincer umatlas      2594 Jul 23 08:11 pandaJob.out
[2025-07-23 09:51:24] -rw-------. 1 boincer umatlas    978421 Jul 23 08:12 agis_schedconf.cvmfs.json
[2025-07-23 09:51:24] -rw-------. 1 boincer umatlas   1593041 Jul 23 08:12 agis_ddmendpoints.agis.ALL.json
[2025-07-23 09:51:24] drwx------. 4 boincer umatlas      4096 Jul 23 08:12 pilot3
[2025-07-23 09:51:24] -rw-r--r--. 1 boincer umatlas      7159 Jul 23 09:46 init_data.xml
[2025-07-23 09:51:24] -rw-------. 1 boincer umatlas 308012228 Jul 23 09:50 HITS.45697541._005549.pool.root.1
[2025-07-23 09:51:24] -rw-r--r--. 1 boincer umatlas       530 Jul 23 09:50 boinc_task_state.xml
[2025-07-23 09:51:24] -rw-------. 1 boincer umatlas      1048 Jul 23 09:50 memory_monitor_summary.json
[2025-07-23 09:51:24] -rw-------. 1 boincer umatlas    328366 Jul 23 09:50 log.45697541._005549.job.log.tgz.1
[2025-07-23 09:51:24] -rw-------. 1 boincer umatlas      7794 Jul 23 09:50 heartbeat.json
[2025-07-23 09:51:24] -rw-r--r--. 1 boincer umatlas      8192 Jul 23 09:51 boinc_mmap_file
[2025-07-23 09:51:24] -rw-r--r--. 1 boincer umatlas        27 Jul 23 09:51 wrapper_checkpoint.txt
[2025-07-23 09:51:24] -rw-------. 1 boincer umatlas       823 Jul 23 09:51 pilotlog.txt
[2025-07-23 09:51:24] -rw-------. 1 boincer umatlas        95 Jul 23 09:51 pilot_heartbeat.json
[2025-07-23 09:51:24] -rw-------. 1 boincer umatlas    552278 Jul 23 09:51 log.45697541._005549.job.log.1
[2025-07-23 09:51:24] -rw-------. 1 boincer umatlas       357 Jul 23 09:51 output.list
[2025-07-23 09:51:24] -rw-r--r--. 1 boincer umatlas       620 Jul 23 09:51 runtime_log
[2025-07-23 09:51:24] -rw-------. 1 boincer umatlas    901120 Jul 23 09:51 result.tar.gz
[2025-07-23 09:51:24] -rw-------. 1 boincer umatlas       656 Jul 23 09:51 VmiLDm79fy7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmvrKLDmnIb24m.diag
[2025-07-23 09:51:24] -rw-r--r--. 1 boincer umatlas      8655 Jul 23 09:51 runtime_log.err
[2025-07-23 09:51:24] -rw-r--r--. 1 boincer umatlas     21475 Jul 23 09:51 stderr.txt
[2025-07-23 09:51:24] HITS file was successfully produced:
[2025-07-23 09:51:24] -rw-------. 1 boincer umatlas 308012228 Jul 23 09:50 shared/HITS.pool.root.1
[2025-07-23 09:51:24]  *** Contents of shared directory: ***
[2025-07-23 09:51:24] total 637800
[2025-07-23 09:51:24] -rw-r--r--. 2 boincer umatlas 343618728 Jul 23 08:11 ATLAS.root_0
[2025-07-23 09:51:24] -rw-r--r--. 2 boincer umatlas     15095 Jul 23 08:11 start_atlas.sh
[2025-07-23 09:51:24] -rw-r--r--. 2 boincer umatlas    542893 Jul 23 08:11 input.tar.gz
[2025-07-23 09:51:24] -rw-------. 1 boincer umatlas 308012228 Jul 23 09:50 HITS.pool.root.1
[2025-07-23 09:51:24] -rw-------. 1 boincer umatlas    901120 Jul 23 09:51 result.tar.gz
09:51:26 (1363756): run_atlas exited; CPU time 36846.741683
09:51:26 (1363756): called boinc_finish(0)

</stderr_txt>
]]>

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