Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
08:05:52 (536833): wrapper (7.7.26015): starting
08:05:52 (536833): wrapper: running run_atlas (--nthreads 8)
[2025-07-23 08:05:52] Arguments: --nthreads 8
[2025-07-23 08:05:52] Threads: 8
[2025-07-23 08:05:52] Checking for CVMFS
[2025-07-23 08:05:53] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-23 08:05:53] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-23 08:05:53] Running cvmfs_config stat atlas.cern.ch
[2025-07-23 08:05:54] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-23 08:05:54] 2.12.6.0 20986 184079 1101180 148657 2 575 24727921 32935937 28323 130560 1 107982560 99.591 114740822 18887 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-07-23 08:05:54] CVMFS is ok
[2025-07-23 08:05:54] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-07-23 08:05:54] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-07-23 08:05:54] Further information can be found at the LHC@home message board.
[2025-07-23 08:05:54] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-23 08:05:54] Checking for apptainer binary...
[2025-07-23 08:05:54] Using apptainer found in PATH at /usr/bin/apptainer
[2025-07-23 08:05:54] Running /usr/bin/apptainer --version
[2025-07-23 08:05:54] apptainer version 1.4.1-1.el9
[2025-07-23 08:05:54] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-23 08:05:54] lc-10-10.aglt2.org
[2025-07-23 08:05:54] apptainer works
[2025-07-23 08:05:55] Set ATHENA_PROC_NUMBER=8
[2025-07-23 08:05:55] Set ATHENA_CORE_NUMBER=8
[2025-07-23 08:05:55] Starting ATLAS job with PandaID=6743009369
[2025-07-23 08:05:55] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-23 12:47:05]  *** The last 200 lines of the pilot log: ***
[2025-07-23 12:47:05] 2025-07-23 16:46:28,296 | INFO     | monitor loop #1022: job 0:6743009369 is in state 'finished'
[2025-07-23 12:47:05] 2025-07-23 16:46:28,296 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-23 12:47:05] 2025-07-23 16:46:29,115 | INFO     | CPU arch script returned: x86-64-v4
[2025-07-23 12:47:05] 2025-07-23 16:46:29,151 | INFO     | found 48 cores (24 cores per socket, 2 sockets) HT, CPU MHz: 2553.5854166666663
[2025-07-23 12:47:05] 2025-07-23 16:46:29,240 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6743009369/memory_monitor_summary.json (trf name=prmon)
[2025-07-23 12:47:05] 2025-07-23 16:46:29,241 | INFO     | extracted standard info from prmon json
[2025-07-23 12:47:05] 2025-07-23 16:46:29,242 | INFO     | extracted standard memory fields from prmon json
[2025-07-23 12:47:05] 2025-07-23 16:46:29,242 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-23 12:47:05] 2025-07-23 16:46:29,242 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-23 12:47:05] 2025-07-23 16:46:29,242 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-23 12:47:05] 2025-07-23 16:46:29,277 | INFO     | fitting pss+swap vs Time
[2025-07-23 12:47:05] 2025-07-23 16:46:29,277 | INFO     | sum of square deviations: 6308786443.538466
[2025-07-23 12:47:05] 2025-07-23 16:46:29,280 | INFO     | sum of deviations: 114277318080.76921
[2025-07-23 12:47:05] 2025-07-23 16:46:29,280 | INFO     | mean x: 1753280834.1538463
[2025-07-23 12:47:05] 2025-07-23 16:46:29,280 | INFO     | mean y: 2174711.1245421246
[2025-07-23 12:47:05] 2025-07-23 16:46:29,280 | INFO     | -- intersect: -31756743325.279556
[2025-07-23 12:47:05] 2025-07-23 16:46:29,280 | INFO     | intersect: -31756743325.279556
[2025-07-23 12:47:05] 2025-07-23 16:46:29,286 | INFO     | chi2: 3.262508875458699
[2025-07-23 12:47:05] 2025-07-23 16:46:29,286 | INFO     | sum of square deviations: 5968441456.727645
[2025-07-23 12:47:05] 2025-07-23 16:46:29,288 | INFO     | sum of deviations: 127045562765.05981
[2025-07-23 12:47:05] 2025-07-23 16:46:29,288 | INFO     | mean x: 1753280681.652985
[2025-07-23 12:47:05] 2025-07-23 16:46:29,289 | INFO     | mean y: 2180323.925373134
[2025-07-23 12:47:05] 2025-07-23 16:46:29,289 | INFO     | -- intersect: -37318539415.16675
[2025-07-23 12:47:05] 2025-07-23 16:46:29,289 | INFO     | intersect: -37318539415.16675
[2025-07-23 12:47:05] 2025-07-23 16:46:29,289 | INFO     | chi2: 2.489867658195221
[2025-07-23 12:47:05] 2025-07-23 16:46:29,289 | INFO     | current chi2=2.489867658195221 (change=23.682424991252997 %)
[2025-07-23 12:47:05] 2025-07-23 16:46:29,289 | INFO     | right removable region: 267
[2025-07-23 12:47:05] 2025-07-23 16:46:29,297 | INFO     | sum of square deviations: 5968432368.417901
[2025-07-23 12:47:05] 2025-07-23 16:46:29,299 | INFO     | sum of deviations: 64796940319.26863
[2025-07-23 12:47:05] 2025-07-23 16:46:29,299 | INFO     | mean x: 1753280986.6567163
[2025-07-23 12:47:05] 2025-07-23 16:46:29,299 | INFO     | mean y: 2196776.850746269
[2025-07-23 12:47:05] 2025-07-23 16:46:29,299 | INFO     | -- intersect: -19032490464.720264
[2025-07-23 12:47:05] 2025-07-23 16:46:29,299 | INFO     | intersect: -19032490464.720264
[2025-07-23 12:47:05] 2025-07-23 16:46:29,300 | INFO     | chi2: 1.4360220476110568
[2025-07-23 12:47:05] 2025-07-23 16:46:29,300 | INFO     | current chi2=1.4360220476110568 (change=55.98411828353551 %)
[2025-07-23 12:47:05] 2025-07-23 16:46:29,300 | INFO     | sum of square deviations: 5640543643.292761
[2025-07-23 12:47:05] 2025-07-23 16:46:29,307 | INFO     | sum of deviations: 40881239478.56653
[2025-07-23 12:47:05] 2025-07-23 16:46:29,308 | INFO     | mean x: 1753281139.1596959
[2025-07-23 12:47:05] 2025-07-23 16:46:29,308 | INFO     | mean y: 2207895.5817490495
[2025-07-23 12:47:05] 2025-07-23 16:46:29,309 | INFO     | -- intersect: -12705132151.059433
[2025-07-23 12:47:05] 2025-07-23 16:46:29,310 | INFO     | intersect: -12705132151.059433
[2025-07-23 12:47:05] 2025-07-23 16:46:29,310 | INFO     | chi2: 1.1371196149480176
[2025-07-23 12:47:05] 2025-07-23 16:46:29,310 | INFO     | current chi2=1.1371196149480176 (change=20.81461305975688 %)
[2025-07-23 12:47:05] 2025-07-23 16:46:29,310 | INFO     | left removable region: 20
[2025-07-23 12:47:05] 2025-07-23 16:46:29,341 | INFO     | sum of square deviations: 4672373358.194365
[2025-07-23 12:47:05] 2025-07-23 16:46:29,343 | INFO     | sum of deviations: 27942891660.68016
[2025-07-23 12:47:05] 2025-07-23 16:46:29,343 | INFO     | mean x: 1753281261.165992
[2025-07-23 12:47:05] 2025-07-23 16:46:29,343 | INFO     | mean y: 2227433.08097166
[2025-07-23 12:47:05] 2025-07-23 16:46:29,343 | INFO     | -- intersect: -10483182138.382475
[2025-07-23 12:47:05] 2025-07-23 16:46:29,343 | INFO     | intersect: -10483182138.382475
[2025-07-23 12:47:05] 2025-07-23 16:46:29,343 | INFO     | chi2: 0.1168796328700109
[2025-07-23 12:47:05] 2025-07-23 16:46:29,344 | INFO     | -- intersect: -10483182138.382475
[2025-07-23 12:47:05] 2025-07-23 16:46:29,344 | INFO     | current memory leak: 5.98 B/s (using 247 data points, chi2=0.12)
[2025-07-23 12:47:05] 2025-07-23 16:46:29,344 | INFO     | could have reported an average CPU frequency of 2519 MHz (13 samples)
[2025-07-23 12:47:05] 2025-07-23 16:46:29,368 | INFO     | ..............................
[2025-07-23 12:47:05] 2025-07-23 16:46:29,368 | INFO     | . Timing measurements:
[2025-07-23 12:47:05] 2025-07-23 16:46:29,368 | INFO     | . get job = 0 s
[2025-07-23 12:47:05] 2025-07-23 16:46:29,368 | INFO     | . initial setup = 4 s
[2025-07-23 12:47:05] 2025-07-23 16:46:29,368 | INFO     | . payload setup = 38 s
[2025-07-23 12:47:05] 2025-07-23 16:46:29,368 | INFO     | . stage-in = 0 s
[2025-07-23 12:47:05] 2025-07-23 16:46:29,368 | INFO     | . payload execution = 16643 s
[2025-07-23 12:47:05] 2025-07-23 16:46:29,368 | INFO     | . stage-out = 4 s
[2025-07-23 12:47:05] 2025-07-23 16:46:29,369 | INFO     | . log creation = 0 s
[2025-07-23 12:47:05] 2025-07-23 16:46:29,369 | INFO     | ..............................
[2025-07-23 12:47:05] 2025-07-23 16:46:29,548 | INFO     | 
[2025-07-23 12:47:05] 2025-07-23 16:46:29,548 | INFO     | job summary report
[2025-07-23 12:47:05] 2025-07-23 16:46:29,548 | INFO     | --------------------------------------------------
[2025-07-23 12:47:05] 2025-07-23 16:46:29,548 | INFO     | PanDA job id: 6743009369
[2025-07-23 12:47:05] 2025-07-23 16:46:29,548 | INFO     | task id: 45697541
[2025-07-23 12:47:05] 2025-07-23 16:46:29,549 | INFO     | errors: (none)
[2025-07-23 12:47:05] 2025-07-23 16:46:29,549 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-23 12:47:05] 2025-07-23 16:46:29,549 | INFO     | pilot state: finished 
[2025-07-23 12:47:05] 2025-07-23 16:46:29,549 | INFO     | transexitcode: 0
[2025-07-23 12:47:05] 2025-07-23 16:46:29,549 | INFO     | exeerrorcode: 0
[2025-07-23 12:47:05] 2025-07-23 16:46:29,549 | INFO     | exeerrordiag: 
[2025-07-23 12:47:05] 2025-07-23 16:46:29,549 | INFO     | exitcode: 0
[2025-07-23 12:47:05] 2025-07-23 16:46:29,549 | INFO     | exitmsg: OK
[2025-07-23 12:47:05] 2025-07-23 16:46:29,549 | INFO     | cpuconsumptiontime: 71368 s
[2025-07-23 12:47:05] 2025-07-23 16:46:29,549 | INFO     | nevents: 400
[2025-07-23 12:47:05] 2025-07-23 16:46:29,549 | INFO     | neventsw: 0
[2025-07-23 12:47:05] 2025-07-23 16:46:29,549 | INFO     | pid: 557923
[2025-07-23 12:47:05] 2025-07-23 16:46:29,549 | INFO     | pgrp: 557923
[2025-07-23 12:47:05] 2025-07-23 16:46:29,550 | INFO     | corecount: 8
[2025-07-23 12:47:05] 2025-07-23 16:46:29,550 | INFO     | event service: False
[2025-07-23 12:47:05] 2025-07-23 16:46:29,550 | INFO     | sizes: {0: 2397336, 1: 2397364, 2: 2397563, 13: 2397563, 24: 2397619, 31: 2397909, 35: 2398065, 16686: 2429922, 16692: 2438920, 16693: 2438976, 16717: 2439170}
[2025-07-23 12:47:05] 2025-07-23 16:46:29,550 | INFO     | --------------------------------------------------
[2025-07-23 12:47:05] 2025-07-23 16:46:29,550 | INFO     | 
[2025-07-23 12:47:05] 2025-07-23 16:46:29,550 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-07-23 12:47:05] 2025-07-23 16:46:29,639 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-23 12:47:05] 2025-07-23 16:46:29,640 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-23 12:47:05] 2025-07-23 16:46:29,641 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-23 12:47:05] 2025-07-23 16:46:29,641 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-23 12:47:05] 2025-07-23 16:46:29,641 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-23 12:47:05] 2025-07-23 16:46:29,641 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-23 12:47:05] 2025-07-23 16:46:29,641 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-23 12:47:05] 2025-07-23 16:46:29,641 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-23 12:47:05] 2025-07-23 16:46:29,641 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-23 12:47:05] 2025-07-23 16:46:29,641 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-23 12:47:05] 2025-07-23 16:46:29,641 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-23 12:47:05] 2025-07-23 16:46:29,642 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-23 12:47:05] 2025-07-23 16:46:29,642 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-23 12:47:05] 2025-07-23 16:46:29,642 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-23 12:47:05] 2025-07-23 16:46:29,642 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-23 12:47:05] 2025-07-23 16:46:29,642 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-23 12:47:05] 2025-07-23 16:46:29,642 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-23 12:47:05] 2025-07-23 16:46:29,642 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-23 12:47:05] 2025-07-23 16:46:29,642 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-23 12:47:05] 2025-07-23 16:46:29,643 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-23 12:47:05] 2025-07-23 16:46:29,643 | INFO     | job 6743009369 has completed (purged errors)
[2025-07-23 12:47:05] 2025-07-23 16:46:29,643 | INFO     | overall cleanup function is called
[2025-07-23 12:47:05] 2025-07-23 16:46:30,654 | INFO     | --- collectZombieJob: --- 10, [557923]
[2025-07-23 12:47:05] 2025-07-23 16:46:30,654 | INFO     | zombie collector waiting for pid 557923
[2025-07-23 12:47:05] 2025-07-23 16:46:30,654 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-23 12:47:05] 2025-07-23 16:46:30,654 | INFO     | collected zombie processes
[2025-07-23 12:47:05] 2025-07-23 16:46:30,654 | INFO     | will attempt to kill all subprocesses of pid=557923
[2025-07-23 12:47:05] 2025-07-23 16:46:32,210 | INFO     | process IDs to be killed: [557923] (in reverse order)
[2025-07-23 12:47:05] 2025-07-23 16:46:32,460 | WARNING  | found no corresponding commands to process id(s)
[2025-07-23 12:47:05] 2025-07-23 16:46:32,461 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-23 12:47:05] 2025-07-23 16:46:32,499 | INFO     | did not find any defunct processes belonging to 557923
[2025-07-23 12:47:05] 2025-07-23 16:46:32,539 | INFO     | did not find any defunct processes belonging to 557923
[2025-07-23 12:47:05] 2025-07-23 16:46:32,539 | INFO     | ready for new job
[2025-07-23 12:47:05] 2025-07-23 16:46:32,539 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-23 12:47:05] 2025-07-23 16:46:32,551 | INFO     | ***************************************
[2025-07-23 12:47:05] 2025-07-23 16:46:32,551 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-23 12:47:05] 2025-07-23 16:46:32,552 | INFO     | ***************************************
[2025-07-23 12:47:05] 2025-07-23 16:46:32,552 | INFO     | 
[2025-07-23 12:47:05] 2025-07-23 16:46:32,578 | INFO     | architecture information:
[2025-07-23 12:47:05] 2025-07-23 16:46:32,578 | INFO     | executing command: cat /etc/os-release
[2025-07-23 12:47:05] 2025-07-23 16:46:32,638 | INFO     | cat /etc/os-release:
[2025-07-23 12:47:05] NAME="CentOS Linux"
[2025-07-23 12:47:05] VERSION="7 (Core)"
[2025-07-23 12:47:05] ID="centos"
[2025-07-23 12:47:05] ID_LIKE="rhel fedora"
[2025-07-23 12:47:05] VERSION_ID="7"
[2025-07-23 12:47:05] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-23 12:47:05] ANSI_COLOR="0;31"
[2025-07-23 12:47:05] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-23 12:47:05] HOME_URL="https://www.centos.org/"
[2025-07-23 12:47:05] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-23 12:47:05] 
[2025-07-23 12:47:05] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-23 12:47:05] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-23 12:47:05] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-23 12:47:05] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-23 12:47:05] 
[2025-07-23 12:47:05] 2025-07-23 16:46:32,638 | INFO     | ***************************************
[2025-07-23 12:47:05] 2025-07-23 16:46:33,142 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-07-23 12:47:05] 2025-07-23 16:46:33,194 | INFO     | sufficient remaining disk space (94656004096 B)
[2025-07-23 12:47:05] 2025-07-23 16:46:33,194 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-23 12:47:05] 2025-07-23 16:46:33,194 | INFO     | current server update state: UPDATING_FINAL
[2025-07-23 12:47:05] 2025-07-23 16:46:33,194 | INFO     | update_server=False
[2025-07-23 12:47:05] 2025-07-23 16:46:33,194 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-23 12:47:05] 2025-07-23 16:46:33,196 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-23 12:47:05] 2025-07-23 16:46:33,394 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-07-23 12:47:05] 2025-07-23 16:46:33,394 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-07-23 12:47:05] 2025-07-23 16:46:33,400 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-23 12:47:05] 2025-07-23 16:46:33,401 | INFO     | will abort loop
[2025-07-23 12:47:05] 2025-07-23 16:46:33,681 | INFO     | all data control threads have been joined
[2025-07-23 12:47:05] 2025-07-23 16:46:33,805 | INFO     | all payload control threads have been joined
[2025-07-23 12:47:05] 2025-07-23 16:46:34,207 | INFO     | [job] retrieve thread has finished
[2025-07-23 12:47:05] 2025-07-23 16:46:34,270 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-23 12:47:05] 2025-07-23 16:46:34,407 | INFO     | [job] job monitor thread has finished
[2025-07-23 12:47:05] 2025-07-23 16:46:34,566 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-23 12:47:05] 2025-07-23 16:46:34,627 | INFO     | [job] validate thread has finished
[2025-07-23 12:47:05] 2025-07-23 16:46:34,682 | INFO     | [payload] validate_pre thread has finished
[2025-07-23 12:47:05] 2025-07-23 16:46:34,687 | INFO     | [data] control thread has finished
[2025-07-23 12:47:05] 2025-07-23 16:46:34,777 | INFO     | [job] create_data_payload thread has finished
[2025-07-23 12:47:05] 2025-07-23 16:46:34,777 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-23 12:47:05] 2025-07-23 16:46:34,807 | INFO     | all job control threads have been joined
[2025-07-23 12:47:05] 2025-07-23 16:46:34,811 | INFO     | [payload] control thread has finished
[2025-07-23 12:47:05] 2025-07-23 16:46:34,889 | INFO     | [data] copytool_in thread has finished
[2025-07-23 12:47:05] 2025-07-23 16:46:35,202 | INFO     | [data] copytool_out thread has finished
[2025-07-23 12:47:05] 2025-07-23 16:46:35,267 | INFO     | [payload] validate_post thread has finished
[2025-07-23 12:47:05] 2025-07-23 16:46:35,386 | INFO     | [payload] failed_post thread has finished
[2025-07-23 12:47:05] 2025-07-23 16:46:35,572 | INFO     | [job] queue monitor thread has finished
[2025-07-23 12:47:05] 2025-07-23 16:46:35,643 | INFO     | [payload] execute_payloads thread has finished
[2025-07-23 12:47:05] 2025-07-23 16:46:35,813 | INFO     | [job] control thread has finished
[2025-07-23 12:47:05] 2025-07-23 16:46:38,286 | INFO     | [data] queue_monitor thread has finished
[2025-07-23 12:47:05] 2025-07-23 16:46:38,448 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139704215598912)>', '<ExcThread(monitor, started 139703726626560)>']
[2025-07-23 12:47:05] 2025-07-23 16:46:43,475 | INFO     | all workflow threads have been joined
[2025-07-23 12:47:05] 2025-07-23 16:46:43,479 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-23 12:47:05] 2025-07-23 16:46:43,479 | INFO     | traces error code: 0
[2025-07-23 12:47:05] 2025-07-23 16:46:43,479 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-23 12:47:05] 2025-07-23 16:47:03,434 | INFO     | PID=545761 has CPU usage=3.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-07-23 12:47:05] 2025-07-23 16:47:03,434 | INFO     | .. there are 56 such processes running
[2025-07-23 12:47:05] 2025-07-23 16:47:03,435 | INFO     | found 0 job(s) in 20 queues
[2025-07-23 12:47:05] 2025-07-23 16:47:03,435 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-23 12:47:05] 2025-07-23 16:47:03,435 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-23 12:47:05] 2025-07-23 16:47:03,435 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-23 12:47:05] 2025-07-23 16:47:03,435 | INFO     | [monitor] control thread has ended
[2025-07-23 12:47:05] 2025-07-23 16:47:04,117 [wrapper] ==== pilot stdout END ====
[2025-07-23 12:47:05] 2025-07-23 16:47:04,172 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-23 12:47:05] 2025-07-23 16:47:04,185 [wrapper] pilotpid: 545761
[2025-07-23 12:47:05] 2025-07-23 16:47:04,236 [wrapper] Pilot exit status: 0
[2025-07-23 12:47:05] 2025-07-23 16:47:04,362 [wrapper] pandaids: 6743009369
[2025-07-23 12:47:05] 2025-07-23 16:47:04,678 [wrapper] cleanup supervisor_pilot 1788300 545762
[2025-07-23 12:47:05] 2025-07-23 16:47:04,713 [wrapper] Test setup, not cleaning
[2025-07-23 12:47:05] 2025-07-23 16:47:04,751 [wrapper] apfmon messages muted
[2025-07-23 12:47:05] 2025-07-23 16:47:04,775 [wrapper] ==== wrapper stdout END ====
[2025-07-23 12:47:05] 2025-07-23 16:47:04,809 [wrapper] ==== wrapper stderr END ====
[2025-07-23 12:47:05]  *** Error codes and diagnostics ***
[2025-07-23 12:47:05]     "exeErrorCode": 0,
[2025-07-23 12:47:05]     "exeErrorDiag": "",
[2025-07-23 12:47:05]     "pilotErrorCode": 0,
[2025-07-23 12:47:05]     "pilotErrorDiag": "",
[2025-07-23 12:47:05]  *** Listing of results directory ***
[2025-07-23 12:47:05] total 646008
[2025-07-23 12:47:05] -rw-r--r--. 1 boincer umatlas    530466 Jul 22 23:19 pilot3.tar.gz
[2025-07-23 12:47:05] -rw-r--r--. 1 boincer umatlas      5112 Jul 22 23:55 queuedata.json
[2025-07-23 12:47:05] -rwx------. 1 boincer umatlas     36292 Jul 22 23:59 runpilot2-wrapper.sh
[2025-07-23 12:47:05] -rw-r--r--. 1 boincer umatlas       100 Jul 23 08:05 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-23 12:47:05] -rwxr-xr-x. 1 boincer umatlas      7986 Jul 23 08:05 run_atlas
[2025-07-23 12:47:05] -rw-r--r--. 1 boincer umatlas       105 Jul 23 08:05 job.xml
[2025-07-23 12:47:05] -rw-r--r--. 2 boincer umatlas 344986392 Jul 23 08:05 EVNT.45697539._000184.pool.root.1
[2025-07-23 12:47:05] -rw-r--r--. 2 boincer umatlas     15095 Jul 23 08:05 start_atlas.sh
[2025-07-23 12:47:05] drwxrwx--x. 2 boincer umatlas      4096 Jul 23 08:05 shared
[2025-07-23 12:47:05] -rw-r--r--. 2 boincer umatlas    542902 Jul 23 08:05 input.tar.gz
[2025-07-23 12:47:05] -rw-r--r--. 1 boincer umatlas         0 Jul 23 08:05 boinc_lockfile
[2025-07-23 12:47:05] -rw-r--r--. 1 boincer umatlas      2593 Jul 23 08:05 pandaJob.out
[2025-07-23 12:47:05] -rw-------. 1 boincer umatlas    978421 Jul 23 08:06 agis_schedconf.cvmfs.json
[2025-07-23 12:47:05] drwx------. 4 boincer umatlas      4096 Jul 23 08:06 pilot3
[2025-07-23 12:47:05] -rw-r--r--. 1 boincer umatlas      6866 Jul 23 12:36 init_data.xml
[2025-07-23 12:47:05] -rw-------. 1 boincer umatlas 309082118 Jul 23 12:44 HITS.45697541._005440.pool.root.1
[2025-07-23 12:47:05] -rw-r--r--. 1 boincer umatlas       531 Jul 23 12:45 boinc_task_state.xml
[2025-07-23 12:47:05] -rw-------. 1 boincer umatlas      1045 Jul 23 12:45 memory_monitor_summary.json
[2025-07-23 12:47:05] -rw-------. 1 boincer umatlas   1593041 Jul 23 12:46 agis_ddmendpoints.agis.ALL.json
[2025-07-23 12:47:05] -rw-------. 1 boincer umatlas    418532 Jul 23 12:46 log.45697541._005440.job.log.tgz.1
[2025-07-23 12:47:05] -rw-------. 1 boincer umatlas      7825 Jul 23 12:46 heartbeat.json
[2025-07-23 12:47:05] -rw-r--r--. 1 boincer umatlas        28 Jul 23 12:46 wrapper_checkpoint.txt
[2025-07-23 12:47:05] -rw-r--r--. 1 boincer umatlas      8192 Jul 23 12:46 boinc_mmap_file
[2025-07-23 12:47:05] -rw-------. 1 boincer umatlas       822 Jul 23 12:47 pilotlog.txt
[2025-07-23 12:47:05] -rw-------. 1 boincer umatlas        95 Jul 23 12:47 pilot_heartbeat.json
[2025-07-23 12:47:05] -rw-------. 1 boincer umatlas   1367355 Jul 23 12:47 log.45697541._005440.job.log.1
[2025-07-23 12:47:05] -rw-------. 1 boincer umatlas       357 Jul 23 12:47 output.list
[2025-07-23 12:47:05] -rw-r--r--. 1 boincer umatlas       620 Jul 23 12:47 runtime_log
[2025-07-23 12:47:05] -rw-------. 1 boincer umatlas   1802240 Jul 23 12:47 result.tar.gz
[2025-07-23 12:47:05] -rw-------. 1 boincer umatlas       657 Jul 23 12:47 vyNODmBpfy7n9Rq4apOajLDm4fhM0noT9bVof3QYDmilvKDmv72HXm.diag
[2025-07-23 12:47:05] -rw-r--r--. 1 boincer umatlas      8661 Jul 23 12:47 runtime_log.err
[2025-07-23 12:47:05] -rw-r--r--. 1 boincer umatlas     21254 Jul 23 12:47 stderr.txt
[2025-07-23 12:47:05] HITS file was successfully produced:
[2025-07-23 12:47:05] -rw-------. 1 boincer umatlas 309082118 Jul 23 12:44 shared/HITS.pool.root.1
[2025-07-23 12:47:05]  *** Contents of shared directory: ***
[2025-07-23 12:47:05] total 641060
[2025-07-23 12:47:05] -rw-r--r--. 2 boincer umatlas 344986392 Jul 23 08:05 ATLAS.root_0
[2025-07-23 12:47:05] -rw-r--r--. 2 boincer umatlas     15095 Jul 23 08:05 start_atlas.sh
[2025-07-23 12:47:05] -rw-r--r--. 2 boincer umatlas    542902 Jul 23 08:05 input.tar.gz
[2025-07-23 12:47:05] -rw-------. 1 boincer umatlas 309082118 Jul 23 12:44 HITS.pool.root.1
[2025-07-23 12:47:05] -rw-------. 1 boincer umatlas   1802240 Jul 23 12:47 result.tar.gz
12:47:07 (536833): run_atlas exited; CPU time 72285.033290
12:47:07 (536833): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN