Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
06:41:32 (11053): wrapper (7.7.26015): starting
06:41:32 (11053): wrapper: running run_atlas (--nthreads 8)
[2025-07-24 06:41:32] Arguments: --nthreads 8
[2025-07-24 06:41:32] Threads: 8
[2025-07-24 06:41:32] Checking for CVMFS
[2025-07-24 06:41:32] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-24 06:41:33] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-24 06:41:33] Running cvmfs_config stat atlas.cern.ch
[2025-07-24 06:41:33] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-24 06:41:33] 2.11.2.0 3966 104729 136784 148682 2 112 19496782 25165825 3758 130560 0 75938226 99.856 47859434 3363 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-07-24 06:41:33] CVMFS is ok
[2025-07-24 06:41:33] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-24 06:41:33] Checking for apptainer binary...
[2025-07-24 06:41:33] Using apptainer found in PATH at /usr/bin/apptainer
[2025-07-24 06:41:33] Running /usr/bin/apptainer --version
[2025-07-24 06:41:33] apptainer version 1.3.2-1.el7
[2025-07-24 06:41:33] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-24 06:41:35] cg-vwn439.simple-grid.lan
[2025-07-24 06:41:35] apptainer works
[2025-07-24 06:41:35] Set ATHENA_PROC_NUMBER=8
[2025-07-24 06:41:35] Set ATHENA_CORE_NUMBER=8
[2025-07-24 06:41:35] Starting ATLAS job with PandaID=6741872356
[2025-07-24 06:41:35] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/6 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-24 16:41:32]  *** The last 200 lines of the pilot log: ***
[2025-07-24 16:41:32] 2025-07-24 11:17:32,673 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-24 16:41:32] 2025-07-24 11:17:32,673 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-24 16:41:32] 2025-07-24 11:17:32,688 | INFO     | fitting pss+swap vs Time
[2025-07-24 16:41:32] 2025-07-24 11:17:32,689 | INFO     | sum of square deviations: 17972496978.0
[2025-07-24 16:41:32] 2025-07-24 11:17:32,693 | INFO     | sum of deviations: 12361101365.999989
[2025-07-24 16:41:32] 2025-07-24 11:17:32,694 | INFO     | mean x: 1753343943.0
[2025-07-24 16:41:32] 2025-07-24 11:17:32,694 | INFO     | mean y: 2563269.312661499
[2025-07-24 16:41:32] 2025-07-24 11:17:32,694 | INFO     | -- intersect: -1203349422.474973
[2025-07-24 16:41:32] 2025-07-24 11:17:32,694 | INFO     | intersect: -1203349422.474973
[2025-07-24 16:41:32] 2025-07-24 11:17:32,695 | INFO     | chi2: 2.627470417775239
[2025-07-24 16:41:32] 2025-07-24 11:17:32,695 | INFO     | sum of square deviations: 17284846875.5
[2025-07-24 16:41:32] 2025-07-24 11:17:32,709 | INFO     | sum of deviations: 38431135484.50001
[2025-07-24 16:41:32] 2025-07-24 11:17:32,709 | INFO     | mean x: 1753343790.5
[2025-07-24 16:41:32] 2025-07-24 11:17:32,709 | INFO     | mean y: 2568989.615183246
[2025-07-24 16:41:32] 2025-07-24 11:17:32,710 | INFO     | -- intersect: -3895816298.317146
[2025-07-24 16:41:32] 2025-07-24 11:17:32,710 | INFO     | intersect: -3895816298.317146
[2025-07-24 16:41:32] 2025-07-24 11:17:32,710 | INFO     | chi2: 1.8601063871860757
[2025-07-24 16:41:32] 2025-07-24 11:17:32,710 | INFO     | current chi2=1.8601063871860757 (change=29.205429884113194 %)
[2025-07-24 16:41:32] 2025-07-24 11:17:32,711 | INFO     | sum of square deviations: 16614964548.0
[2025-07-24 16:41:32] 2025-07-24 11:17:32,715 | INFO     | sum of deviations: 37717523964.99999
[2025-07-24 16:41:32] 2025-07-24 11:17:32,716 | INFO     | mean x: 1753343638.0
[2025-07-24 16:41:32] 2025-07-24 11:17:32,716 | INFO     | mean y: 2568826.952254642
[2025-07-24 16:41:32] 2025-07-24 11:17:32,716 | INFO     | -- intersect: -3977685268.3299274
[2025-07-24 16:41:32] 2025-07-24 11:17:32,716 | INFO     | intersect: -3977685268.3299274
[2025-07-24 16:41:32] 2025-07-24 11:17:32,717 | INFO     | chi2: 1.8604627224797645
[2025-07-24 16:41:32] 2025-07-24 11:17:32,717 | INFO     | current chi2=1.8604627224797645 (change=-0.01915671577408494 %)
[2025-07-24 16:41:32] 2025-07-24 11:17:32,717 | INFO     | right removable region: 376
[2025-07-24 16:41:32] 2025-07-24 11:17:32,717 | INFO     | sum of square deviations: 17284846875.5
[2025-07-24 16:41:32] 2025-07-24 11:17:32,722 | INFO     | sum of deviations: -59966899089.5
[2025-07-24 16:41:32] 2025-07-24 11:17:32,722 | INFO     | mean x: 1753344095.5
[2025-07-24 16:41:32] 2025-07-24 11:17:32,722 | INFO     | mean y: 2579237.07591623
[2025-07-24 16:41:32] 2025-07-24 11:17:32,723 | INFO     | -- intersect: 6085514723.941645
[2025-07-24 16:41:32] 2025-07-24 11:17:32,723 | INFO     | intersect: 6085514723.941645
[2025-07-24 16:41:32] 2025-07-24 11:17:32,723 | INFO     | chi2: 0.9752018922519063
[2025-07-24 16:41:32] 2025-07-24 11:17:32,724 | INFO     | current chi2=0.9752018922519063 (change=62.88438166022664 %)
[2025-07-24 16:41:32] 2025-07-24 11:17:32,733 | INFO     | sum of square deviations: 16614964548.0
[2025-07-24 16:41:32] 2025-07-24 11:17:32,738 | INFO     | sum of deviations: -65309377025.0
[2025-07-24 16:41:32] 2025-07-24 11:17:32,738 | INFO     | mean x: 1753344248.0
[2025-07-24 16:41:32] 2025-07-24 11:17:32,738 | INFO     | mean y: 2580444.522546419
[2025-07-24 16:41:32] 2025-07-24 11:17:32,738 | INFO     | -- intersect: 6894549441.292452
[2025-07-24 16:41:32] 2025-07-24 11:17:32,739 | INFO     | intersect: 6894549441.292452
[2025-07-24 16:41:32] 2025-07-24 11:17:32,739 | INFO     | chi2: 0.9521540332643902
[2025-07-24 16:41:32] 2025-07-24 11:17:32,739 | INFO     | current chi2=0.9521540332643902 (change=2.3633935875877707 %)
[2025-07-24 16:41:32] 2025-07-24 11:17:32,739 | INFO     | left removable region: 20
[2025-07-24 16:41:32] 2025-07-24 11:17:32,740 | INFO     | sum of square deviations: 13990234405.0
[2025-07-24 16:41:32] 2025-07-24 11:17:32,744 | INFO     | sum of deviations: -16547790951.500006
[2025-07-24 16:41:32] 2025-07-24 11:17:32,744 | INFO     | mean x: 1753344217.5
[2025-07-24 16:41:32] 2025-07-24 11:17:32,744 | INFO     | mean y: 2581075.9971910114
[2025-07-24 16:41:32] 2025-07-24 11:17:32,745 | INFO     | -- intersect: 2076454374.849281
[2025-07-24 16:41:32] 2025-07-24 11:17:32,745 | INFO     | intersect: 2076454374.849281
[2025-07-24 16:41:32] 2025-07-24 11:17:32,745 | INFO     | chi2: 0.12416624114826146
[2025-07-24 16:41:32] 2025-07-24 11:17:32,746 | INFO     | -- intersect: 2076454374.849281
[2025-07-24 16:41:32] 2025-07-24 11:17:32,746 | INFO     | current memory leak: -1.18 B/s (using 356 data points, chi2=0.12)
[2025-07-24 16:41:32] 2025-07-24 11:17:32,771 | INFO     | could have reported an average CPU frequency of 1999 MHz (16 samples)
[2025-07-24 16:41:32] 2025-07-24 11:17:32,771 | INFO     | ..............................
[2025-07-24 16:41:32] 2025-07-24 11:17:32,771 | INFO     | . Timing measurements:
[2025-07-24 16:41:32] 2025-07-24 11:17:32,771 | INFO     | . get job = 0 s
[2025-07-24 16:41:32] 2025-07-24 11:17:32,771 | INFO     | . initial setup = 2 s
[2025-07-24 16:41:32] 2025-07-24 11:17:32,772 | INFO     | . payload setup = 11 s
[2025-07-24 16:41:32] 2025-07-24 11:17:32,772 | INFO     | . stage-in = 0 s
[2025-07-24 16:41:32] 2025-07-24 11:17:32,772 | INFO     | . payload execution = 23603 s
[2025-07-24 16:41:32] 2025-07-24 11:17:32,772 | INFO     | . stage-out = 3 s
[2025-07-24 16:41:32] 2025-07-24 11:17:32,772 | INFO     | . log creation = 1 s
[2025-07-24 16:41:32] 2025-07-24 11:17:32,772 | INFO     | ..............................
[2025-07-24 16:41:32] 2025-07-24 11:17:33,387 | INFO     | 
[2025-07-24 16:41:32] 2025-07-24 11:17:33,387 | INFO     | job summary report
[2025-07-24 16:41:32] 2025-07-24 11:17:33,387 | INFO     | --------------------------------------------------
[2025-07-24 16:41:32] 2025-07-24 11:17:33,387 | INFO     | PanDA job id: 6741872356
[2025-07-24 16:41:32] 2025-07-24 11:17:33,388 | INFO     | task id: 45697490
[2025-07-24 16:41:32] 2025-07-24 11:17:33,388 | INFO     | errors: (none)
[2025-07-24 16:41:32] 2025-07-24 11:17:33,388 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-24 16:41:32] 2025-07-24 11:17:33,388 | INFO     | pilot state: finished 
[2025-07-24 16:41:32] 2025-07-24 11:17:33,388 | INFO     | transexitcode: 0
[2025-07-24 16:41:32] 2025-07-24 11:17:33,388 | INFO     | exeerrorcode: 0
[2025-07-24 16:41:32] 2025-07-24 11:17:33,388 | INFO     | exeerrordiag: 
[2025-07-24 16:41:32] 2025-07-24 11:17:33,388 | INFO     | exitcode: 0
[2025-07-24 16:41:32] 2025-07-24 11:17:33,388 | INFO     | exitmsg: OK
[2025-07-24 16:41:32] 2025-07-24 11:17:33,388 | INFO     | cpuconsumptiontime: 90666 s
[2025-07-24 16:41:32] 2025-07-24 11:17:33,388 | INFO     | nevents: 400
[2025-07-24 16:41:32] 2025-07-24 11:17:33,388 | INFO     | neventsw: 0
[2025-07-24 16:41:32] 2025-07-24 11:17:33,388 | INFO     | pid: 21631
[2025-07-24 16:41:32] 2025-07-24 11:17:33,389 | INFO     | pgrp: 21631
[2025-07-24 16:41:32] 2025-07-24 11:17:33,389 | INFO     | corecount: 8
[2025-07-24 16:41:32] 2025-07-24 11:17:33,389 | INFO     | event service: False
[2025-07-24 16:41:32] 2025-07-24 11:17:33,389 | INFO     | sizes: {0: 2397332, 1: 2397531, 9: 2397793, 12: 2397821, 23618: 2431885, 23622: 2440883, 23623: 2441067, 23714: 2441261}
[2025-07-24 16:41:32] 2025-07-24 11:17:33,389 | INFO     | --------------------------------------------------
[2025-07-24 16:41:32] 2025-07-24 11:17:33,389 | INFO     | 
[2025-07-24 16:41:32] 2025-07-24 11:17:33,389 | INFO     | executing command: ls -lF /var/lib/boinc/slots/6
[2025-07-24 16:41:32] 2025-07-24 11:17:33,874 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-24 16:41:32] 2025-07-24 11:17:33,875 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-24 16:41:32] 2025-07-24 11:17:33,875 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-24 16:41:32] 2025-07-24 11:17:33,875 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-24 16:41:32] 2025-07-24 11:17:33,875 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-24 16:41:32] 2025-07-24 11:17:33,875 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-24 16:41:32] 2025-07-24 11:17:33,875 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-24 16:41:32] 2025-07-24 11:17:33,875 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-24 16:41:32] 2025-07-24 11:17:33,875 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-24 16:41:32] 2025-07-24 11:17:33,875 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-24 16:41:32] 2025-07-24 11:17:33,876 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-24 16:41:32] 2025-07-24 11:17:33,876 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-24 16:41:32] 2025-07-24 11:17:33,876 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-24 16:41:32] 2025-07-24 11:17:33,876 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-24 16:41:32] 2025-07-24 11:17:33,876 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-24 16:41:32] 2025-07-24 11:17:33,876 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-24 16:41:32] 2025-07-24 11:17:33,876 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-24 16:41:32] 2025-07-24 11:17:33,876 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-24 16:41:32] 2025-07-24 11:17:33,876 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-24 16:41:32] 2025-07-24 11:17:33,876 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-24 16:41:32] 2025-07-24 11:17:33,876 | INFO     | job 6741872356 has completed (purged errors)
[2025-07-24 16:41:32] 2025-07-24 11:17:33,877 | INFO     | overall cleanup function is called
[2025-07-24 16:41:32] 2025-07-24 11:17:34,886 | INFO     | --- collectZombieJob: --- 10, [21631]
[2025-07-24 16:41:32] 2025-07-24 11:17:34,886 | INFO     | zombie collector waiting for pid 21631
[2025-07-24 16:41:32] 2025-07-24 11:17:34,886 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-24 16:41:32] 2025-07-24 11:17:34,887 | INFO     | collected zombie processes
[2025-07-24 16:41:32] 2025-07-24 11:17:34,887 | INFO     | will attempt to kill all subprocesses of pid=21631
[2025-07-24 16:41:32] 2025-07-24 11:17:35,043 | INFO     | process IDs to be killed: [21631] (in reverse order)
[2025-07-24 16:41:32] 2025-07-24 11:17:35,998 | WARNING  | found no corresponding commands to process id(s)
[2025-07-24 16:41:32] 2025-07-24 11:17:35,998 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-24 16:41:32] 2025-07-24 11:17:36,001 | INFO     | did not find any defunct processes belonging to 21631
[2025-07-24 16:41:32] 2025-07-24 11:17:36,005 | INFO     | did not find any defunct processes belonging to 21631
[2025-07-24 16:41:32] 2025-07-24 11:17:36,005 | INFO     | ready for new job
[2025-07-24 16:41:32] 2025-07-24 11:17:36,005 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-24 16:41:32] 2025-07-24 11:17:36,007 | INFO     | ***************************************
[2025-07-24 16:41:32] 2025-07-24 11:17:36,007 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-24 16:41:32] 2025-07-24 11:17:36,007 | INFO     | ***************************************
[2025-07-24 16:41:32] 2025-07-24 11:17:36,008 | INFO     | 
[2025-07-24 16:41:32] 2025-07-24 11:17:36,008 | INFO     | pilot is running in a VM
[2025-07-24 16:41:32] 2025-07-24 11:17:36,008 | INFO     | architecture information:
[2025-07-24 16:41:32] 2025-07-24 11:17:36,017 | INFO     | executing command: cat /etc/os-release
[2025-07-24 16:41:32] 2025-07-24 11:17:36,277 | INFO     | cat /etc/os-release:
[2025-07-24 16:41:32] NAME="CentOS Linux"
[2025-07-24 16:41:32] VERSION="7 (Core)"
[2025-07-24 16:41:32] ID="centos"
[2025-07-24 16:41:32] ID_LIKE="rhel fedora"
[2025-07-24 16:41:32] VERSION_ID="7"
[2025-07-24 16:41:32] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-24 16:41:32] ANSI_COLOR="0;31"
[2025-07-24 16:41:32] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-24 16:41:32] HOME_URL="https://www.centos.org/"
[2025-07-24 16:41:32] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-24 16:41:32] 
[2025-07-24 16:41:32] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-24 16:41:32] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-24 16:41:32] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-24 16:41:32] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-24 16:41:32] 
[2025-07-24 16:41:32] 2025-07-24 11:17:36,278 | INFO     | ***************************************
[2025-07-24 16:41:32] 2025-07-24 11:17:36,782 | INFO     | executing command: df -mP /var/lib/boinc/slots/6
[2025-07-24 16:41:32] 2025-07-24 11:17:36,962 | INFO     | sufficient remaining disk space (495387148288 B)
[2025-07-24 16:41:32] 2025-07-24 11:17:36,963 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-24 16:41:32] 2025-07-24 11:17:36,963 | INFO     | current server update state: UPDATING_FINAL
[2025-07-24 16:41:32] 2025-07-24 11:17:36,963 | INFO     | update_server=False
[2025-07-24 16:41:32] 2025-07-24 11:17:36,963 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-24 16:41:32] 2025-07-24 11:17:37,193 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-24 16:41:32] 2025-07-24 11:17:37,356 | INFO     | all payload control threads have been joined
[2025-07-24 16:41:32] 2025-07-24 11:17:37,423 | INFO     | all job control threads have been joined
[2025-07-24 16:41:32] 2025-07-24 11:17:37,437 | INFO     | all data control threads have been joined
[2025-07-24 16:41:32] 2025-07-24 11:17:37,632 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-24 16:41:32] 2025-07-24 11:17:37,632 | INFO     | aborting loop
[2025-07-24 16:41:32] 2025-07-24 11:17:37,770 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-24 16:41:32] 2025-07-24 11:17:37,913 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-24 16:41:32] 2025-07-24 11:17:37,969 | INFO     | [job] retrieve thread has finished
[2025-07-24 16:41:32] 2025-07-24 11:17:38,360 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-24 16:41:32] 2025-07-24 11:17:38,362 | INFO     | [payload] control thread has finished
[2025-07-24 16:41:32] 2025-07-24 11:17:38,428 | INFO     | [job] control thread has finished
[2025-07-24 16:41:32] 2025-07-24 11:17:38,443 | INFO     | [data] control thread has finished
[2025-07-24 16:41:32] 2025-07-24 11:17:38,573 | INFO     | [job] validate thread has finished
[2025-07-24 16:41:32] 2025-07-24 11:17:38,617 | INFO     | [data] copytool_in thread has finished
[2025-07-24 16:41:32] 2025-07-24 11:17:38,638 | INFO     | [job] job monitor thread has finished
[2025-07-24 16:41:32] 2025-07-24 11:17:38,871 | INFO     | [payload] failed_post thread has finished
[2025-07-24 16:41:32] 2025-07-24 11:17:38,919 | INFO     | [job] queue monitor thread has finished
[2025-07-24 16:41:32] 2025-07-24 11:17:39,013 | INFO     | [payload] execute_payloads thread has finished
[2025-07-24 16:41:32] 2025-07-24 11:17:39,200 | INFO     | [data] copytool_out thread has finished
[2025-07-24 16:41:32] 2025-07-24 11:17:39,286 | INFO     | [job] create_data_payload thread has finished
[2025-07-24 16:41:32] 2025-07-24 11:17:39,459 | INFO     | [payload] validate_pre thread has finished
[2025-07-24 16:41:32] 2025-07-24 11:17:39,551 | INFO     | [payload] validate_post thread has finished
[2025-07-24 16:41:32] 2025-07-24 11:17:41,779 | INFO     | [data] queue_monitor thread has finished
[2025-07-24 16:41:32] 2025-07-24 11:17:42,726 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140193687168832)>', '<ExcThread(monitor, started 140193008961280)>']
[2025-07-24 16:41:32] 2025-07-24 11:17:47,752 | INFO     | all workflow threads have been joined
[2025-07-24 16:41:32] 2025-07-24 11:17:47,752 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-24 16:41:32] 2025-07-24 11:17:47,752 | INFO     | traces error code: 0
[2025-07-24 16:41:32] 2025-07-24 11:17:47,753 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-24 16:41:32] 2025-07-24 11:18:06,955 | INFO     | PID=15124 has CPU usage=1.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-07-24 16:41:32] 2025-07-24 11:18:06,956 | INFO     | .. there are 9 such processes running
[2025-07-24 16:41:32] 2025-07-24 11:18:06,957 | INFO     | found 0 job(s) in 20 queues
[2025-07-24 16:41:32] 2025-07-24 11:18:06,957 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-24 16:41:32] 2025-07-24 11:18:06,957 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-24 16:41:32] 2025-07-24 11:18:06,958 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-24 16:41:32] 2025-07-24 11:18:06,958 | CRITICAL | thread 'MainThread' is not alive
[2025-07-24 16:41:32] 2025-07-24 11:18:06,958 | INFO     | [monitor] control thread has ended
[2025-07-24 16:41:32] 2025-07-24 11:18:07,190 [wrapper] ==== pilot stdout END ====
[2025-07-24 16:41:32] 2025-07-24 11:18:07,263 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-24 16:41:32] 2025-07-24 11:18:07,314 [wrapper] pilotpid: 15124
[2025-07-24 16:41:32] 2025-07-24 11:18:07,380 [wrapper] Pilot exit status: 0
[2025-07-24 16:41:32] 2025-07-24 11:18:07,833 [wrapper] pandaids: 6741872356
[2025-07-24 16:41:32] 2025-07-24 11:18:08,844 [wrapper] cleanup supervisor_pilot 11355 15125
[2025-07-24 16:41:32] 2025-07-24 11:18:08,955 [wrapper] Test setup, not cleaning
[2025-07-24 16:41:32] 2025-07-24 11:18:09,063 [wrapper] apfmon messages muted
[2025-07-24 16:41:32] 2025-07-24 11:18:09,164 [wrapper] ==== wrapper stdout END ====
[2025-07-24 16:41:32] 2025-07-24 11:18:09,267 [wrapper] ==== wrapper stderr END ====
[2025-07-24 16:41:32]  *** Error codes and diagnostics ***
[2025-07-24 16:41:32]     "exeErrorCode": 0,
[2025-07-24 16:41:32]     "exeErrorDiag": "",
[2025-07-24 16:41:32]     "pilotErrorCode": 0,
[2025-07-24 16:41:32]     "pilotErrorDiag": "",
[2025-07-24 16:41:32]  *** Listing of results directory ***
[2025-07-24 16:41:32] total 652764
[2025-07-24 16:41:32] -rw-r--r--. 1 boinc boinc    530466 Jul 23 05:19 pilot3.tar.gz
[2025-07-24 16:41:32] -rw-r--r--. 1 boinc boinc      5112 Jul 23 05:41 queuedata.json
[2025-07-24 16:41:32] -rwx------. 1 boinc boinc     36292 Jul 23 05:44 runpilot2-wrapper.sh
[2025-07-24 16:41:32] -rw-r--r--. 1 boinc boinc       100 Jul 24 06:41 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-24 16:41:32] -rwxr-xr-x. 1 boinc boinc      7986 Jul 24 06:41 run_atlas
[2025-07-24 16:41:32] -rw-r--r--. 1 boinc boinc       105 Jul 24 06:41 job.xml
[2025-07-24 16:41:32] -rw-r--r--. 1 boinc boinc      6391 Jul 24 06:41 init_data.xml
[2025-07-24 16:41:32] -rw-r--r--. 2 boinc boinc 347581417 Jul 24 06:41 EVNT.45697488._000207.pool.root.1
[2025-07-24 16:41:32] -rw-r--r--. 2 boinc boinc     15095 Jul 24 06:41 start_atlas.sh
[2025-07-24 16:41:32] drwxrwx--x. 2 boinc boinc        68 Jul 24 06:41 shared
[2025-07-24 16:41:32] -rw-r--r--. 2 boinc boinc    542907 Jul 24 06:41 input.tar.gz
[2025-07-24 16:41:32] -rw-r--r--. 1 boinc boinc         0 Jul 24 06:41 boinc_lockfile
[2025-07-24 16:41:32] -rw-r--r--. 1 boinc boinc      2589 Jul 24 06:41 pandaJob.out
[2025-07-24 16:41:32] -rw-------. 1 boinc boinc    979640 Jul 24 06:41 agis_schedconf.cvmfs.json
[2025-07-24 16:41:32] drwx------. 4 boinc boinc      4096 Jul 24 06:41 pilot3
[2025-07-24 16:41:32] -rw-------. 1 boinc boinc 312023641 Jul 24 13:14 HITS.45697490._004261.pool.root.1
[2025-07-24 16:41:32] -rw-r--r--. 1 boinc boinc       531 Jul 24 13:14 boinc_task_state.xml
[2025-07-24 16:41:32] -rw-------. 1 boinc boinc      1020 Jul 24 13:15 memory_monitor_summary.json
[2025-07-24 16:41:32] -rw-------. 1 boinc boinc   1593041 Jul 24 13:15 agis_ddmendpoints.agis.ALL.json
[2025-07-24 16:41:32] -rw-------. 1 boinc boinc    467848 Jul 24 13:16 log.45697490._004261.job.log.tgz.1
[2025-07-24 16:41:32] -rw-------. 1 boinc boinc      7776 Jul 24 13:17 heartbeat.json
[2025-07-24 16:41:32] -rw-------. 1 boinc boinc        95 Jul 24 13:18 pilot_heartbeat.json
[2025-07-24 16:41:32] -rw-------. 1 boinc boinc       890 Jul 24 13:18 pilotlog.txt
[2025-07-24 16:41:32] -rw-------. 1 boinc boinc   2015584 Jul 24 13:18 log.45697490._004261.job.log.1
[2025-07-24 16:41:32] -rw-------. 1 boinc boinc       357 Jul 24 13:18 output.list
[2025-07-24 16:41:32] -rw-r--r--. 1 boinc boinc       620 Jul 24 13:18 runtime_log
[2025-07-24 16:41:32] -rw-------. 1 boinc boinc   2498560 Jul 24 13:18 result.tar.gz
[2025-07-24 16:41:32] -rw-------. 1 boinc boinc       658 Jul 24 13:18 yszNDmJafy7n9Rq4apOajLDm4fhM0noT9bVof3QYDmKlvKDmHHxS2m.diag
[2025-07-24 16:41:32] -rw-r--r--. 1 boinc boinc      8660 Jul 24 13:18 runtime_log.err
[2025-07-24 16:41:32] -rw-r--r--. 1 boinc boinc      8192 Jul 24 16:41 boinc_mmap_file
[2025-07-24 16:41:32] -rw-r--r--. 1 boinc boinc        28 Jul 24 16:41 wrapper_checkpoint.txt
[2025-07-24 16:41:32] -rw-r--r--. 1 boinc boinc     20571 Jul 24 16:41 stderr.txt
[2025-07-24 16:41:32] HITS file was successfully produced:
[2025-07-24 16:41:32] -rw-------. 1 boinc boinc 312023641 Jul 24 13:14 shared/HITS.pool.root.1
[2025-07-24 16:41:32]  *** Contents of shared directory: ***
[2025-07-24 16:41:32] total 647136
[2025-07-24 16:41:32] -rw-r--r--. 2 boinc boinc 347581417 Jul 24 06:41 ATLAS.root_0
[2025-07-24 16:41:32] -rw-r--r--. 2 boinc boinc     15095 Jul 24 06:41 start_atlas.sh
[2025-07-24 16:41:32] -rw-r--r--. 2 boinc boinc    542907 Jul 24 06:41 input.tar.gz
[2025-07-24 16:41:32] -rw-------. 1 boinc boinc 312023641 Jul 24 13:14 HITS.pool.root.1
[2025-07-24 16:41:32] -rw-------. 1 boinc boinc   2498560 Jul 24 13:18 result.tar.gz
16:41:34 (11053): run_atlas exited; CPU time 90976.843174
16:41:34 (11053): called boinc_finish(0)

</stderr_txt>
]]>

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