Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
05:03:21 (1208095): wrapper (7.7.26015): starting
05:03:21 (1208095): wrapper: running run_atlas (--nthreads 12)
[2025-07-23 05:03:21] Arguments: --nthreads 12
[2025-07-23 05:03:21] Threads: 12
[2025-07-23 05:03:21] Checking for CVMFS
[2025-07-23 05:03:21] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-23 05:03:22] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-23 05:03:22] Running cvmfs_config stat atlas.cern.ch
[2025-07-23 05:03:22] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-23 05:03:22] 2.11.5.0 6468 31362 316592 148657 2 336 43895893 45568001 27290 130560 0 253553492 99.778 161353785 26546 http://cvmfs-s1bnl.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://206.12.9.162:3129 1
[2025-07-23 05:03:22] CVMFS is ok
[2025-07-23 05:03:22] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-07-23 05:03:22] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-07-23 05:03:22] Further information can be found at the LHC@home message board.
[2025-07-23 05:03:22] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-23 05:03:22] Checking for apptainer binary...
[2025-07-23 05:03:22] Using apptainer found in PATH at /usr/bin/apptainer
[2025-07-23 05:03:22] Running /usr/bin/apptainer --version
[2025-07-23 05:03:22] apptainer version 1.4.1-1.el9
[2025-07-23 05:03:22] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-23 05:03:23] wns0074.triumf.lcg
[2025-07-23 05:03:23] apptainer works
[2025-07-23 05:03:23] Set ATHENA_PROC_NUMBER=12
[2025-07-23 05:03:23] Set ATHENA_CORE_NUMBER=12
[2025-07-23 05:03:23] Starting ATLAS job with PandaID=6741883675
[2025-07-23 05:03:23] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-23 05:08:25]  *** The last 200 lines of the pilot log: ***
[2025-07-23 05:08:25] 2025-07-23 12:07:53,423 | INFO     | extracted standard memory fields from prmon json
[2025-07-23 05:08:25] 2025-07-23 12:07:53,423 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-23 05:08:25] 2025-07-23 12:07:53,423 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-23 05:08:25] 2025-07-23 12:07:53,423 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-23 05:08:25] 2025-07-23 12:07:53,423 | WARNING  | wrong length of table data, x=[1753272307.0], y=[1590.0] (must be same and length>=4)
[2025-07-23 05:08:25] 2025-07-23 12:07:53,437 | INFO     | could have reported an average CPU frequency of 2653 MHz (4 samples)
[2025-07-23 05:08:25] 2025-07-23 12:07:53,437 | INFO     | ..............................
[2025-07-23 05:08:25] 2025-07-23 12:07:53,437 | INFO     | . Timing measurements:
[2025-07-23 05:08:25] 2025-07-23 12:07:53,437 | INFO     | . get job = 0 s
[2025-07-23 05:08:25] 2025-07-23 12:07:53,437 | INFO     | . initial setup = 5 s
[2025-07-23 05:08:25] 2025-07-23 12:07:53,437 | INFO     | . payload setup = 18 s
[2025-07-23 05:08:25] 2025-07-23 12:07:53,437 | INFO     | . stage-in = 0 s
[2025-07-23 05:08:25] 2025-07-23 12:07:53,437 | INFO     | . payload execution = 45 s
[2025-07-23 05:08:25] 2025-07-23 12:07:53,437 | INFO     | . stage-out = 0 s
[2025-07-23 05:08:25] 2025-07-23 12:07:53,437 | INFO     | . log creation = 0 s
[2025-07-23 05:08:25] 2025-07-23 12:07:53,437 | INFO     | ..............................
[2025-07-23 05:08:25] 2025-07-23 12:07:53,437 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-07-23 05:08:25] 2025-07-23 12:07:53,438 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6741883675/pilotlog.txt
[2025-07-23 05:08:25] 2025-07-23 12:07:53,505 | WARNING  | detected the following tail of warning/fatal messages in the pilot log:
[2025-07-23 05:08:25] - Log from pilotlog.txt -
[2025-07-23 05:08:25] 2025-07-23 12:07:53,422 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6741883675/memory_monitor_summary.json (trf name=prmon)
[2025-07-23 05:08:25] 2025-07-23 12:07:53,422 | INFO     | extracted standard info from prmon json
[2025-07-23 05:08:25] 2025-07-23 12:07:53,423 | INFO     | extracted standard memory fields from prmon json
[2025-07-23 05:08:25] 2025-07-23 12:07:53,423 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-23 05:08:25] 2025-07-23 12:07:53,423 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-23 05:08:25] 2025-07-23 12:07:53,423 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-23 05:08:25] 2025-07-23 12:07:53,423 | WARNING  | wrong length of table data, x=[1753272307.0], y=[1590.0] (must be same and length>=4)
[2025-07-23 05:08:25] 2025-07-23 12:07:53,437 | INFO     | could have reported an average CPU frequency of 2653 MHz (4 samples)
[2025-07-23 05:08:25] 2025-07-23 12:07:53,437 | INFO     | ..............................
[2025-07-23 05:08:25] 2025-07-23 12:07:53,437 | INFO     | . Timing measurements:
[2025-07-23 05:08:25] 2025-07-23 12:07:53,437 | INFO     | . get job = 0 s
[2025-07-23 05:08:25] 2025-07-23 12:07:53,437 | INFO     | . initial setup = 5 s
[2025-07-23 05:08:25] 2025-07-23 12:07:53,437 | INFO     | . payload setup = 18 s
[2025-07-23 05:08:25] 2025-07-23 12:07:53,437 | INFO     | . stage-in = 0 s
[2025-07-23 05:08:25] 2025-07-23 12:07:53,437 | INFO     | . payload execution = 45 s
[2025-07-23 05:08:25] 2025-07-23 12:07:53,437 | INFO     | . stage-out = 0 s
[2025-07-23 05:08:25] 2025-07-23 12:07:53,437 | INFO     | . log creation = 0 s
[2025-07-23 05:08:25] 2025-07-23 12:07:53,437 | INFO     | ..............................
[2025-07-23 05:08:25] 2025-07-23 12:07:53,437 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-07-23 05:08:25] 2025-07-23 12:07:53,438 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6741883675/pilotlog.txt
[2025-07-23 05:08:25] 2025-07-23 12:07:53,505 | WARNING  | 
[2025-07-23 05:08:25] [begin log extracts]
[2025-07-23 05:08:25] - Log from pilotlog.txt -
[2025-07-23 05:08:25] 2025-07-23 12:07:53,422 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6741883675/memory_monitor_summary.json (trf name=prmon)
[2025-07-23 05:08:25] 2025-07-23 12:07:53,422 | INFO     | extracted standard info from prmon json
[2025-07-23 05:08:25] 2025-07-23 12:07:53,423 | INFO     | extracted standard memory fields from prmon json
[2025-07-23 05:08:25] 2025-07-23 12:07:53,423 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-23 05:08:25] 2025-07-23 12:07:53,423 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-23 05:08:25] 2025-07-23 12:07:53,423 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-23 05:08:25] 2025-07-23 12:07:53,423 | WARNING  | wrong length of table data, x=[1753272307.0], y=[1590.0] (must be same and length>=4)
[2025-07-23 05:08:25] 2025-07-23 12:07:53,437 | INFO     | could have reported an average CPU frequency of 2653 MHz (4 samples)
[2025-07-23 05:08:25] 2025-07-23 12:07:53,437 | INFO     | ..............................
[2025-07-23 05:08:25] 2025-07-23 12:07:53,437 | INFO     | . Timing measurements:
[2025-07-23 05:08:25] 2025-07-23 12:07:53,437 | INFO     | . get job = 0 s
[2025-07-23 05:08:25] 2025-07-23 12:07:53,437 | INFO     | . initial setup = 5 s
[2025-07-23 05:08:25] 2025-07-23 12:07:53,437 | INFO     | . payload setup = 18 s
[2025-07-23 05:08:25] 2025-07-23 12:07:53,437 | INFO     | . stage-in = 0 s
[2025-07-23 05:08:25] 2025-07-23 12:07:53,437 | INFO     | . payload execution = 45 s
[2025-07-23 05:08:25] 2025-07-23 12:07:53,437 | INFO     | . stage-out = 0 s
[2025-07-23 05:08:25] 2025-07-23 12:07:53,437 | INFO     | . log creation = 0 s
[2025-07-23 05:08:25] 2025-07-23 12:07:53,437 | INFO     | ..............................
[2025-07-23 05:08:25] 2025-07-23 12:07:53,437 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-07-23 05:08:25] 2025-07-23 12:07:53,438 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6741883675/pilotlog.txt
[2025-07-23 05:08:25] [end log extracts]
[2025-07-23 05:08:25] 2025-07-23 12:07:53,505 | WARNING  | pilotErrorCodes = [1305] (will report primary/first error code)
[2025-07-23 05:08:25] 2025-07-23 12:07:53,506 | WARNING  | pilotErrorDiags = ['Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return c
[2025-07-23 05:08:25] 2025-07-23 12:07:53,683 | INFO     | 
[2025-07-23 05:08:25] 2025-07-23 12:07:53,683 | INFO     | job summary report
[2025-07-23 05:08:25] 2025-07-23 12:07:53,683 | INFO     | --------------------------------------------------
[2025-07-23 05:08:25] 2025-07-23 12:07:53,683 | INFO     | PanDA job id: 6741883675
[2025-07-23 05:08:25] 2025-07-23 12:07:53,683 | INFO     | task id: 45697472
[2025-07-23 05:08:25] 2025-07-23 12:07:53,683 | INFO     | error 1/1: 1305: Failed to execute payload:PyJobTransforms.transform.execute 2025-07-23 05:05:29,278 CRITICAL Transform executor raised TransformValidationExceptio
[2025-07-23 05:08:25] 2025-07-23 12:07:53,683 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-23 05:08:25] 2025-07-23 12:07:53,683 | INFO     | pilot state: failed 
[2025-07-23 05:08:25] 2025-07-23 12:07:53,683 | INFO     | transexitcode: 65
[2025-07-23 05:08:25] 2025-07-23 12:07:53,683 | INFO     | exeerrorcode: 65
[2025-07-23 05:08:25] 2025-07-23 12:07:53,683 | INFO     | exeerrordiag: Non-zero return code from EVNTtoHITS (1)
[2025-07-23 05:08:25] 2025-07-23 12:07:53,683 | INFO     | exitcode: 65
[2025-07-23 05:08:25] 2025-07-23 12:07:53,683 | INFO     | exitmsg: Non-zero return code from EVNTtoHITS (1)
[2025-07-23 05:08:25] 2025-07-23 12:07:53,683 | INFO     | cpuconsumptiontime: 17 s
[2025-07-23 05:08:25] 2025-07-23 12:07:53,684 | INFO     | nevents: 0
[2025-07-23 05:08:25] 2025-07-23 12:07:53,684 | INFO     | neventsw: 0
[2025-07-23 05:08:25] 2025-07-23 12:07:53,684 | INFO     | pid: 1227581
[2025-07-23 05:08:25] 2025-07-23 12:07:53,684 | INFO     | pgrp: 1227581
[2025-07-23 05:08:25] 2025-07-23 12:07:53,684 | INFO     | corecount: 12
[2025-07-23 05:08:25] 2025-07-23 12:07:53,684 | INFO     | event service: False
[2025-07-23 05:08:25] 2025-07-23 12:07:53,684 | INFO     | sizes: {0: 2397530, 11: 2397530, 13: 2397820, 22: 2397876, 68: 2421176, 69: 2425624, 201: 2425762}
[2025-07-23 05:08:25] 2025-07-23 12:07:53,684 | INFO     | --------------------------------------------------
[2025-07-23 05:08:25] 2025-07-23 12:07:53,684 | INFO     | 
[2025-07-23 05:08:25] 2025-07-23 12:07:53,684 | INFO     | executing command: ls -lF /home/boinc/slots/0
[2025-07-23 05:08:25] 2025-07-23 12:07:53,718 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-23 05:08:25] 2025-07-23 12:07:53,719 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-23 05:08:25] 2025-07-23 12:07:53,719 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-23 05:08:25] 2025-07-23 12:07:53,719 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-23 05:08:25] 2025-07-23 12:07:53,719 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-23 05:08:25] 2025-07-23 12:07:53,719 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-23 05:08:25] 2025-07-23 12:07:53,719 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-23 05:08:25] 2025-07-23 12:07:53,719 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-23 05:08:25] 2025-07-23 12:07:53,719 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-23 05:08:25] 2025-07-23 12:07:53,719 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-23 05:08:25] 2025-07-23 12:07:53,719 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-23 05:08:25] 2025-07-23 12:07:53,719 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-23 05:08:25] 2025-07-23 12:07:53,719 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-23 05:08:25] 2025-07-23 12:07:53,719 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-23 05:08:25] 2025-07-23 12:07:53,719 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-23 05:08:25] 2025-07-23 12:07:53,719 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-23 05:08:25] 2025-07-23 12:07:53,719 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-23 05:08:25] 2025-07-23 12:07:53,719 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-23 05:08:25] 2025-07-23 12:07:53,719 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-23 05:08:25] 2025-07-23 12:07:53,719 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-23 05:08:25] 2025-07-23 12:07:53,720 | INFO     | job 6741883675 has completed (purged errors)
[2025-07-23 05:08:25] 2025-07-23 12:07:53,720 | INFO     | overall cleanup function is called
[2025-07-23 05:08:25] 2025-07-23 12:07:54,739 | INFO     | --- collectZombieJob: --- 10, [1227581]
[2025-07-23 05:08:25] 2025-07-23 12:07:54,739 | INFO     | zombie collector waiting for pid 1227581
[2025-07-23 05:08:25] 2025-07-23 12:07:54,739 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-23 05:08:25] 2025-07-23 12:07:54,739 | INFO     | collected zombie processes
[2025-07-23 05:08:25] 2025-07-23 12:07:54,739 | INFO     | will attempt to kill all subprocesses of pid=1227581
[2025-07-23 05:08:25] 2025-07-23 12:07:55,031 | INFO     | process IDs to be killed: [1227581] (in reverse order)
[2025-07-23 05:08:25] 2025-07-23 12:07:55,160 | WARNING  | found no corresponding commands to process id(s)
[2025-07-23 05:08:25] 2025-07-23 12:07:55,161 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-23 05:08:25] 2025-07-23 12:07:55,173 | INFO     | did not find any defunct processes belonging to 1227581
[2025-07-23 05:08:25] 2025-07-23 12:07:55,183 | INFO     | did not find any defunct processes belonging to 1227581
[2025-07-23 05:08:25] 2025-07-23 12:07:55,184 | INFO     | ready for new job
[2025-07-23 05:08:25] 2025-07-23 12:07:55,184 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-23 05:08:25] 2025-07-23 12:07:55,185 | INFO     | ***************************************
[2025-07-23 05:08:25] 2025-07-23 12:07:55,186 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-23 05:08:25] 2025-07-23 12:07:55,186 | INFO     | ***************************************
[2025-07-23 05:08:25] 2025-07-23 12:07:55,186 | INFO     | 
[2025-07-23 05:08:25] 2025-07-23 12:07:55,189 | INFO     | architecture information:
[2025-07-23 05:08:25] 2025-07-23 12:07:55,189 | INFO     | executing command: cat /etc/os-release
[2025-07-23 05:08:25] 2025-07-23 12:07:55,202 | INFO     | cat /etc/os-release:
[2025-07-23 05:08:25] NAME="CentOS Linux"
[2025-07-23 05:08:25] VERSION="7 (Core)"
[2025-07-23 05:08:25] ID="centos"
[2025-07-23 05:08:25] ID_LIKE="rhel fedora"
[2025-07-23 05:08:25] VERSION_ID="7"
[2025-07-23 05:08:25] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-23 05:08:25] ANSI_COLOR="0;31"
[2025-07-23 05:08:25] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-23 05:08:25] HOME_URL="https://www.centos.org/"
[2025-07-23 05:08:25] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-23 05:08:25] 
[2025-07-23 05:08:25] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-23 05:08:25] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-23 05:08:25] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-23 05:08:25] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-23 05:08:25] 
[2025-07-23 05:08:25] 2025-07-23 12:07:55,202 | INFO     | ***************************************
[2025-07-23 05:08:25] 2025-07-23 12:07:55,705 | INFO     | executing command: df -mP /home/boinc/slots/0
[2025-07-23 05:08:25] 2025-07-23 12:07:55,730 | INFO     | sufficient remaining disk space (1711151251456 B)
[2025-07-23 05:08:25] 2025-07-23 12:07:55,730 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-23 05:08:25] 2025-07-23 12:07:55,731 | INFO     | current server update state: UPDATING_FINAL
[2025-07-23 05:08:25] 2025-07-23 12:07:55,731 | INFO     | update_server=False
[2025-07-23 05:08:25] 2025-07-23 12:07:55,731 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-23 05:08:25] 2025-07-23 12:07:55,731 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-23 05:08:25] 2025-07-23 12:07:56,009 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-23 05:08:25] 2025-07-23 12:07:56,009 | INFO     | aborting loop
[2025-07-23 05:08:25] 2025-07-23 12:07:56,151 | INFO     | all data control threads have been joined
[2025-07-23 05:08:25] 2025-07-23 12:07:56,737 | INFO     | [job] retrieve thread has finished
[2025-07-23 05:08:25] 2025-07-23 12:07:56,930 | INFO     | [payload] failed_post thread has finished
[2025-07-23 05:08:25] 2025-07-23 12:07:57,017 | INFO     | [job] job monitor thread has finished
[2025-07-23 05:08:25] 2025-07-23 12:07:57,130 | INFO     | all payload control threads have been joined
[2025-07-23 05:08:25] 2025-07-23 12:07:57,159 | INFO     | [data] control thread has finished
[2025-07-23 05:08:25] 2025-07-23 12:07:57,190 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-23 05:08:25] 2025-07-23 12:07:57,200 | INFO     | [payload] execute_payloads thread has finished
[2025-07-23 05:08:25] 2025-07-23 12:07:57,419 | INFO     | all job control threads have been joined
[2025-07-23 05:08:25] 2025-07-23 12:07:57,508 | INFO     | [payload] validate_post thread has finished
[2025-07-23 05:08:25] 2025-07-23 12:07:57,582 | INFO     | [data] copytool_in thread has finished
[2025-07-23 05:08:25] 2025-07-23 12:07:57,743 | INFO     | [data] copytool_out thread has finished
[2025-07-23 05:08:25] 2025-07-23 12:07:57,838 | INFO     | [job] create_data_payload thread has finished
[2025-07-23 05:08:25] 2025-07-23 12:07:58,018 | INFO     | [job] validate thread has finished
[2025-07-23 05:08:25] 2025-07-23 12:07:58,101 | INFO     | [payload] validate_pre thread has finished
[2025-07-23 05:08:25] 2025-07-23 12:07:58,136 | INFO     | [payload] control thread has finished
[2025-07-23 05:08:25] 2025-07-23 12:07:58,425 | INFO     | [job] control thread has finished
[2025-07-23 05:08:25] 2025-07-23 12:07:58,630 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-23 05:08:25] 2025-07-23 12:07:59,007 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-23 05:08:25] 2025-07-23 12:07:59,636 | INFO     | [job] queue monitor thread has finished
[2025-07-23 05:08:25] 2025-07-23 12:08:03,016 | INFO     | [data] queue_monitor thread has finished
[2025-07-23 05:08:25] 2025-07-23 12:08:05,021 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140299366926144)>', '<ExcThread(monitor, started 140298529273600)>']
[2025-07-23 05:08:25] 2025-07-23 12:08:10,046 | INFO     | all workflow threads have been joined
[2025-07-23 05:08:25] 2025-07-23 12:08:10,046 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-23 05:08:25] 2025-07-23 12:08:10,046 | INFO     | traces error code: 0
[2025-07-23 05:08:25] 2025-07-23 12:08:10,047 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-23 05:08:25] 2025-07-23 12:08:25,234 | INFO     | PID=1215112 has CPU usage=2.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-07-23 05:08:25] 2025-07-23 12:08:25,235 | INFO     | .. there are 49 such processes running
[2025-07-23 05:08:25] 2025-07-23 12:08:25,236 | INFO     | found 0 job(s) in 20 queues
[2025-07-23 05:08:25] 2025-07-23 12:08:25,236 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-23 05:08:25] 2025-07-23 12:08:25,236 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-23 05:08:25] 2025-07-23 12:08:25,236 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-23 05:08:25] 2025-07-23 12:08:25,236 | INFO     | [monitor] control thread has ended
[2025-07-23 05:08:25] 2025-07-23 12:08:25,370 [wrapper] ==== pilot stdout END ====
[2025-07-23 05:08:25] 2025-07-23 12:08:25,372 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-23 05:08:25] 2025-07-23 12:08:25,374 [wrapper] pilotpid: 1215112
[2025-07-23 05:08:25] 2025-07-23 12:08:25,375 [wrapper] Pilot exit status: 0
[2025-07-23 05:08:25] 2025-07-23 12:08:25,394 [wrapper] pandaids: 6741883675
[2025-07-23 05:08:25] 2025-07-23 12:08:25,466 [wrapper] cleanup supervisor_pilot 1215132 1215113
[2025-07-23 05:08:25] 2025-07-23 12:08:25,480 [wrapper] Test setup, not cleaning
[2025-07-23 05:08:25] 2025-07-23 12:08:25,482 [wrapper] apfmon messages muted
[2025-07-23 05:08:25] 2025-07-23 12:08:25,484 [wrapper] ==== wrapper stdout END ====
[2025-07-23 05:08:25] 2025-07-23 12:08:25,486 [wrapper] ==== wrapper stderr END ====
[2025-07-23 05:08:25]  *** Error codes and diagnostics ***
[2025-07-23 05:08:25]     "exeErrorCode": 65,
[2025-07-23 05:08:25]     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (1)",
[2025-07-23 05:08:25]     "pilotErrorCode": 1305,
[2025-07-23 05:08:25]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (1)",
[2025-07-23 05:08:25]  *** Listing of results directory ***
[2025-07-23 05:08:25] total 329056
[2025-07-23 05:08:25] -rw-r--r--. 1 boinc boinc    530466 Jul 23 00:44 pilot3.tar.gz
[2025-07-23 05:08:25] -rw-r--r--. 1 boinc boinc      5112 Jul 23 00:55 queuedata.json
[2025-07-23 05:08:25] -rwx------. 1 boinc boinc     36292 Jul 23 00:56 runpilot2-wrapper.sh
[2025-07-23 05:08:25] -rw-r--r--. 1 boinc boinc       100 Jul 23 05:03 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-23 05:08:25] -rwxr-xr-x. 1 boinc boinc      7986 Jul 23 05:03 run_atlas
[2025-07-23 05:08:25] -rw-r--r--. 1 boinc boinc       105 Jul 23 05:03 job.xml
[2025-07-23 05:08:25] -rw-r--r--. 1 boinc boinc      6595 Jul 23 05:03 init_data.xml
[2025-07-23 05:08:25] -rw-r--r--. 2 boinc boinc 332873944 Jul 23 05:03 EVNT.45697470._000188.pool.root.1
[2025-07-23 05:08:25] -rw-r--r--. 2 boinc boinc     15095 Jul 23 05:03 start_atlas.sh
[2025-07-23 05:08:25] drwxrwx--x. 2 boinc boinc      4096 Jul 23 05:03 shared
[2025-07-23 05:08:25] -rw-r--r--. 2 boinc boinc    542905 Jul 23 05:03 input.tar.gz
[2025-07-23 05:08:25] -rw-r--r--. 1 boinc boinc         0 Jul 23 05:03 boinc_lockfile
[2025-07-23 05:08:25] -rw-r--r--. 1 boinc boinc      2611 Jul 23 05:03 pandaJob.out
[2025-07-23 05:08:25] -rw-------. 1 boinc boinc    978421 Jul 23 05:03 agis_schedconf.cvmfs.json
[2025-07-23 05:08:25] -rw-------. 1 boinc boinc   1593041 Jul 23 05:03 agis_ddmendpoints.agis.ALL.json
[2025-07-23 05:08:25] drwx------. 4 boinc boinc      4096 Jul 23 05:04 pilot3
[2025-07-23 05:08:25] -rw-------. 1 boinc boinc       963 Jul 23 05:05 memory_monitor_summary.json
[2025-07-23 05:08:25] -rw-------. 1 boinc boinc     21833 Jul 23 05:05 log.45697472._004108.job.log.tgz.1
[2025-07-23 05:08:25] -rw-------. 1 boinc boinc      8395 Jul 23 05:07 heartbeat.json
[2025-07-23 05:08:25] -rw-r--r--. 1 boinc boinc       523 Jul 23 05:08 boinc_task_state.xml
[2025-07-23 05:08:25] -rw-r--r--. 1 boinc boinc      8192 Jul 23 05:08 boinc_mmap_file
[2025-07-23 05:08:25] -rw-r--r--. 1 boinc boinc        22 Jul 23 05:08 wrapper_checkpoint.txt
[2025-07-23 05:08:25] -rw-------. 1 boinc boinc       823 Jul 23 05:08 pilotlog.txt
[2025-07-23 05:08:25] -rw-------. 1 boinc boinc        95 Jul 23 05:08 pilot_heartbeat.json
[2025-07-23 05:08:25] -rw-------. 1 boinc boinc     80248 Jul 23 05:08 log.45697472._004108.job.log.1
[2025-07-23 05:08:25] -rw-------. 1 boinc boinc       188 Jul 23 05:08 output.list
[2025-07-23 05:08:25] -rw-r--r--. 1 boinc boinc       620 Jul 23 05:08 runtime_log
[2025-07-23 05:08:25] -rw-------. 1 boinc boinc    122880 Jul 23 05:08 result.tar.gz
[2025-07-23 05:08:25] -rw-------. 1 boinc boinc       644 Jul 23 05:08 UZnLDmHWjy7n9Rq4apOajLDm4fhM0noT9bVof3QYDmOxvKDm5nkjcn.diag
[2025-07-23 05:08:25] -rw-r--r--. 1 boinc boinc      8485 Jul 23 05:08 runtime_log.err
[2025-07-23 05:08:25] -rw-r--r--. 1 boinc boinc     21792 Jul 23 05:08 stderr.txt
[2025-07-23 05:08:25] No HITS result produced
[2025-07-23 05:08:25]  *** Contents of shared directory: ***
[2025-07-23 05:08:25] total 325748
[2025-07-23 05:08:25] -rw-r--r--. 2 boinc boinc 332873944 Jul 23 05:03 ATLAS.root_0
[2025-07-23 05:08:25] -rw-r--r--. 2 boinc boinc     15095 Jul 23 05:03 start_atlas.sh
[2025-07-23 05:08:25] -rw-r--r--. 2 boinc boinc    542905 Jul 23 05:03 input.tar.gz
[2025-07-23 05:08:25] -rw-------. 1 boinc boinc    122880 Jul 23 05:08 result.tar.gz
05:08:27 (1208095): run_atlas exited; CPU time 26.083381
05:08:27 (1208095): called boinc_finish(0)

</stderr_txt>
]]>

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