Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
17:30:07 (1741753): wrapper (7.7.26015): starting
17:30:07 (1741753): wrapper: running run_atlas (--nthreads 4)
[2025-07-25 17:30:07] Arguments: --nthreads 4
[2025-07-25 17:30:07] Threads: 4
[2025-07-25 17:30:07] Checking for CVMFS
[2025-07-25 17:30:07] No cvmfs_config command found, will try listing directly
[2025-07-25 17:30:07] CVMFS is ok
[2025-07-25 17:30:07] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-07-25 17:30:07] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-07-25 17:30:07] Further information can be found at the LHC@home message board.
[2025-07-25 17:30:07] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-25 17:30:07] Checking for apptainer binary...
[2025-07-25 17:30:07] which: no apptainer in ((null))
[2025-07-25 17:30:07] apptainer is not installed, using version from CVMFS
[2025-07-25 17:30:07] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-25 17:30:07] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot100/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut16.grid.cesnet.cz
[2025-07-25 17:30:07] apptainer works
[2025-07-25 17:30:07] Set ATHENA_PROC_NUMBER=4
[2025-07-25 17:30:07] Set ATHENA_CORE_NUMBER=4
[2025-07-25 17:30:07] Starting ATLAS job with PandaID=6741712287
[2025-07-25 17:30:07] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot100/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-25 20:42:01]  *** The last 200 lines of the pilot log: ***
[2025-07-25 20:42:01] 2025-07-25 18:41:37,398 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-25 20:42:01] 2025-07-25 18:41:37,401 | INFO     | fitting pss+swap vs Time
[2025-07-25 20:42:01] 2025-07-25 18:41:37,401 | INFO     | sum of square deviations: 2060343747.0
[2025-07-25 20:42:01] 2025-07-25 18:41:37,403 | INFO     | sum of deviations: 3655446502.500004
[2025-07-25 20:42:01] 2025-07-25 18:41:37,403 | INFO     | mean x: 1753463153.5
[2025-07-25 20:42:01] 2025-07-25 18:41:37,403 | INFO     | mean y: 2352914.5691489363
[2025-07-25 20:42:01] 2025-07-25 18:41:37,403 | INFO     | -- intersect: -3108628328.7584004
[2025-07-25 20:42:01] 2025-07-25 18:41:37,403 | INFO     | intersect: -3108628328.7584004
[2025-07-25 20:42:01] 2025-07-25 18:41:37,403 | INFO     | chi2: 2.070826916716551
[2025-07-25 20:42:01] 2025-07-25 18:41:37,403 | INFO     | sum of square deviations: 1900284932.0
[2025-07-25 20:42:01] 2025-07-25 18:41:37,404 | INFO     | sum of deviations: 15085645869.999987
[2025-07-25 20:42:01] 2025-07-25 18:41:37,404 | INFO     | mean x: 1753463001.0
[2025-07-25 20:42:01] 2025-07-25 18:41:37,404 | INFO     | mean y: 2363560.912568306
[2025-07-25 20:42:01] 2025-07-25 18:41:37,405 | INFO     | -- intersect: -13917718335.11829
[2025-07-25 20:42:01] 2025-07-25 18:41:37,405 | INFO     | intersect: -13917718335.11829
[2025-07-25 20:42:01] 2025-07-25 18:41:37,405 | INFO     | chi2: 1.2910033994462518
[2025-07-25 20:42:01] 2025-07-25 18:41:37,405 | INFO     | current chi2=1.2910033994462518 (change=37.657590355584475 %)
[2025-07-25 20:42:01] 2025-07-25 18:41:37,405 | INFO     | sum of square deviations: 1748737904.5
[2025-07-25 20:42:01] 2025-07-25 18:41:37,406 | INFO     | sum of deviations: 14453208331.500002
[2025-07-25 20:42:01] 2025-07-25 18:41:37,406 | INFO     | mean x: 1753462848.5
[2025-07-25 20:42:01] 2025-07-25 18:41:37,406 | INFO     | mean y: 2362924.7808988765
[2025-07-25 20:42:01] 2025-07-25 18:41:37,406 | INFO     | -- intersect: -14489896770.454596
[2025-07-25 20:42:01] 2025-07-25 18:41:37,406 | INFO     | intersect: -14489896770.454596
[2025-07-25 20:42:01] 2025-07-25 18:41:37,407 | INFO     | chi2: 1.2918421647614158
[2025-07-25 20:42:01] 2025-07-25 18:41:37,407 | INFO     | current chi2=1.2918421647614158 (change=-0.06497003149052864 %)
[2025-07-25 20:42:01] 2025-07-25 18:41:37,407 | INFO     | right removable region: 177
[2025-07-25 20:42:01] 2025-07-25 18:41:37,407 | INFO     | sum of square deviations: 1900284932.0
[2025-07-25 20:42:01] 2025-07-25 18:41:37,408 | INFO     | sum of deviations: -18530645818.999996
[2025-07-25 20:42:01] 2025-07-25 18:41:37,408 | INFO     | mean x: 1753463306.0
[2025-07-25 20:42:01] 2025-07-25 18:41:37,408 | INFO     | mean y: 2373728.316939891
[2025-07-25 20:42:01] 2025-07-25 18:41:37,408 | INFO     | -- intersect: 17101287124.373281
[2025-07-25 20:42:01] 2025-07-25 18:41:37,408 | INFO     | intersect: 17101287124.373281
[2025-07-25 20:42:01] 2025-07-25 18:41:37,408 | INFO     | chi2: 0.8168546884540611
[2025-07-25 20:42:01] 2025-07-25 18:41:37,408 | INFO     | current chi2=0.8168546884540611 (change=60.554178533218774 %)
[2025-07-25 20:42:01] 2025-07-25 18:41:37,409 | INFO     | sum of square deviations: 1748737904.5
[2025-07-25 20:42:01] 2025-07-25 18:41:37,410 | INFO     | sum of deviations: -16772299225.0
[2025-07-25 20:42:01] 2025-07-25 18:41:37,410 | INFO     | mean x: 1753463458.5
[2025-07-25 20:42:01] 2025-07-25 18:41:37,410 | INFO     | mean y: 2371953.4719101125
[2025-07-25 20:42:01] 2025-07-25 18:41:37,410 | INFO     | -- intersect: 16819994382.988688
[2025-07-25 20:42:01] 2025-07-25 18:41:37,410 | INFO     | intersect: 16819994382.988688
[2025-07-25 20:42:01] 2025-07-25 18:41:37,410 | INFO     | chi2: 0.8162151158876563
[2025-07-25 20:42:01] 2025-07-25 18:41:37,410 | INFO     | current chi2=0.8162151158876563 (change=0.07829698175757706 %)
[2025-07-25 20:42:01] 2025-07-25 18:41:37,410 | INFO     | left removable region: 20
[2025-07-25 20:42:01] 2025-07-25 18:41:37,410 | INFO     | sum of square deviations: 1199940638.0
[2025-07-25 20:42:01] 2025-07-25 18:41:37,411 | INFO     | sum of deviations: -2240510846.0
[2025-07-25 20:42:01] 2025-07-25 18:41:37,411 | INFO     | mean x: 1753463428.0
[2025-07-25 20:42:01] 2025-07-25 18:41:37,411 | INFO     | mean y: 2379642.229299363
[2025-07-25 20:42:01] 2025-07-25 18:41:37,411 | INFO     | -- intersect: 3276419793.9541554
[2025-07-25 20:42:01] 2025-07-25 18:41:37,412 | INFO     | intersect: 3276419793.9541554
[2025-07-25 20:42:01] 2025-07-25 18:41:37,412 | INFO     | chi2: 0.009505211939977843
[2025-07-25 20:42:01] 2025-07-25 18:41:37,412 | INFO     | -- intersect: 3276419793.9541554
[2025-07-25 20:42:01] 2025-07-25 18:41:37,412 | INFO     | current memory leak: -1.87 B/s (using 157 data points, chi2=0.01)
[2025-07-25 20:42:01] 2025-07-25 18:41:37,413 | INFO     | could have reported an average CPU frequency of 3151 MHz (10 samples)
[2025-07-25 20:42:01] 2025-07-25 18:41:37,413 | INFO     | ..............................
[2025-07-25 20:42:01] 2025-07-25 18:41:37,413 | INFO     | . Timing measurements:
[2025-07-25 20:42:01] 2025-07-25 18:41:37,413 | INFO     | . get job = 0 s
[2025-07-25 20:42:01] 2025-07-25 18:41:37,413 | INFO     | . initial setup = 1 s
[2025-07-25 20:42:01] 2025-07-25 18:41:37,414 | INFO     | . payload setup = 8 s
[2025-07-25 20:42:01] 2025-07-25 18:41:37,414 | INFO     | . stage-in = 0 s
[2025-07-25 20:42:01] 2025-07-25 18:41:37,414 | INFO     | . payload execution = 11437 s
[2025-07-25 20:42:01] 2025-07-25 18:41:37,414 | INFO     | . stage-out = 0 s
[2025-07-25 20:42:01] 2025-07-25 18:41:37,414 | INFO     | . log creation = 0 s
[2025-07-25 20:42:01] 2025-07-25 18:41:37,414 | INFO     | ..............................
[2025-07-25 20:42:01] 2025-07-25 18:41:37,797 | INFO     | 
[2025-07-25 20:42:01] 2025-07-25 18:41:37,798 | INFO     | job summary report
[2025-07-25 20:42:01] 2025-07-25 18:41:37,798 | INFO     | --------------------------------------------------
[2025-07-25 20:42:01] 2025-07-25 18:41:37,798 | INFO     | PanDA job id: 6741712287
[2025-07-25 20:42:01] 2025-07-25 18:41:37,798 | INFO     | task id: 45697453
[2025-07-25 20:42:01] 2025-07-25 18:41:37,798 | INFO     | errors: (none)
[2025-07-25 20:42:01] 2025-07-25 18:41:37,798 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-25 20:42:01] 2025-07-25 18:41:37,798 | INFO     | pilot state: finished 
[2025-07-25 20:42:01] 2025-07-25 18:41:37,798 | INFO     | transexitcode: 0
[2025-07-25 20:42:01] 2025-07-25 18:41:37,798 | INFO     | exeerrorcode: 0
[2025-07-25 20:42:01] 2025-07-25 18:41:37,798 | INFO     | exeerrordiag: 
[2025-07-25 20:42:01] 2025-07-25 18:41:37,799 | INFO     | exitcode: 0
[2025-07-25 20:42:01] 2025-07-25 18:41:37,799 | INFO     | exitmsg: OK
[2025-07-25 20:42:01] 2025-07-25 18:41:37,799 | INFO     | cpuconsumptiontime: 43972 s
[2025-07-25 20:42:01] 2025-07-25 18:41:37,799 | INFO     | nevents: 400
[2025-07-25 20:42:01] 2025-07-25 18:41:37,799 | INFO     | neventsw: 0
[2025-07-25 20:42:01] 2025-07-25 18:41:37,799 | INFO     | pid: 1755629
[2025-07-25 20:42:01] 2025-07-25 18:41:37,799 | INFO     | pgrp: 1755629
[2025-07-25 20:42:01] 2025-07-25 18:41:37,799 | INFO     | corecount: 4
[2025-07-25 20:42:01] 2025-07-25 18:41:37,799 | INFO     | event service: False
[2025-07-25 20:42:01] 2025-07-25 18:41:37,799 | INFO     | sizes: {0: 2397575, 6: 2397837, 11: 2397865, 11449: 2427181, 11450: 2436203, 11453: 2436259, 11462: 2436581}
[2025-07-25 20:42:01] 2025-07-25 18:41:37,799 | INFO     | --------------------------------------------------
[2025-07-25 20:42:01] 2025-07-25 18:41:37,799 | INFO     | 
[2025-07-25 20:42:01] 2025-07-25 18:41:37,799 | INFO     | executing command: ls -lF /scratch/boinc/var/slot100/slots/0
[2025-07-25 20:42:01] 2025-07-25 18:41:37,824 | INFO     | 11480s have passed since pilot start - server update state is 'UPDATING_FINAL'
[2025-07-25 20:42:01] 2025-07-25 18:41:37,826 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-25 20:42:01] 2025-07-25 18:41:37,826 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-25 20:42:01] 2025-07-25 18:41:37,827 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-25 20:42:01] 2025-07-25 18:41:37,827 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-25 20:42:01] 2025-07-25 18:41:37,827 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-25 20:42:01] 2025-07-25 18:41:37,827 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-25 20:42:01] 2025-07-25 18:41:37,827 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-25 20:42:01] 2025-07-25 18:41:37,827 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-25 20:42:01] 2025-07-25 18:41:37,827 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-25 20:42:01] 2025-07-25 18:41:37,827 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-25 20:42:01] 2025-07-25 18:41:37,827 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-25 20:42:01] 2025-07-25 18:41:37,827 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-25 20:42:01] 2025-07-25 18:41:37,827 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-25 20:42:01] 2025-07-25 18:41:37,827 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-25 20:42:01] 2025-07-25 18:41:37,828 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-25 20:42:01] 2025-07-25 18:41:37,828 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-25 20:42:01] 2025-07-25 18:41:37,828 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-25 20:42:01] 2025-07-25 18:41:37,828 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-25 20:42:01] 2025-07-25 18:41:37,828 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-25 20:42:01] 2025-07-25 18:41:37,828 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-25 20:42:01] 2025-07-25 18:41:37,828 | INFO     | job 6741712287 has completed (purged errors)
[2025-07-25 20:42:01] 2025-07-25 18:41:37,828 | INFO     | overall cleanup function is called
[2025-07-25 20:42:01] 2025-07-25 18:41:38,838 | INFO     | --- collectZombieJob: --- 10, [1755629]
[2025-07-25 20:42:01] 2025-07-25 18:41:38,838 | INFO     | zombie collector waiting for pid 1755629
[2025-07-25 20:42:01] 2025-07-25 18:41:38,839 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-25 20:42:01] 2025-07-25 18:41:38,839 | INFO     | collected zombie processes
[2025-07-25 20:42:01] 2025-07-25 18:41:38,839 | INFO     | will attempt to kill all subprocesses of pid=1755629
[2025-07-25 20:42:01] 2025-07-25 18:41:40,470 | INFO     | PID=1745671 has CPU usage=16.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2025-07-25 20:42:01] 2025-07-25 18:41:40,471 | INFO     | .. there are 11 such processes running
[2025-07-25 20:42:01] 2025-07-25 18:41:40,500 | INFO     | process IDs to be killed: [1755629] (in reverse order)
[2025-07-25 20:42:01] 2025-07-25 18:41:40,678 | WARNING  | found no corresponding commands to process id(s)
[2025-07-25 20:42:01] 2025-07-25 18:41:40,678 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-25 20:42:01] 2025-07-25 18:41:40,702 | INFO     | did not find any defunct processes belonging to 1755629
[2025-07-25 20:42:01] 2025-07-25 18:41:40,725 | INFO     | did not find any defunct processes belonging to 1755629
[2025-07-25 20:42:01] 2025-07-25 18:41:40,725 | INFO     | ready for new job
[2025-07-25 20:42:01] 2025-07-25 18:41:40,725 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-25 20:42:01] 2025-07-25 18:41:40,727 | INFO     | ***************************************
[2025-07-25 20:42:01] 2025-07-25 18:41:40,727 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-25 20:42:01] 2025-07-25 18:41:40,727 | INFO     | ***************************************
[2025-07-25 20:42:01] 2025-07-25 18:41:40,727 | INFO     | 
[2025-07-25 20:42:01] 2025-07-25 18:41:40,734 | INFO     | architecture information:
[2025-07-25 20:42:01] 2025-07-25 18:41:40,735 | INFO     | executing command: cat /etc/os-release
[2025-07-25 20:42:01] 2025-07-25 18:41:40,757 | INFO     | cat /etc/os-release:
[2025-07-25 20:42:01] NAME="CentOS Linux"
[2025-07-25 20:42:01] VERSION="7 (Core)"
[2025-07-25 20:42:01] ID="centos"
[2025-07-25 20:42:01] ID_LIKE="rhel fedora"
[2025-07-25 20:42:01] VERSION_ID="7"
[2025-07-25 20:42:01] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-25 20:42:01] ANSI_COLOR="0;31"
[2025-07-25 20:42:01] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-25 20:42:01] HOME_URL="https://www.centos.org/"
[2025-07-25 20:42:01] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-25 20:42:01] 
[2025-07-25 20:42:01] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-25 20:42:01] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-25 20:42:01] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-25 20:42:01] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-25 20:42:01] 
[2025-07-25 20:42:01] 2025-07-25 18:41:40,757 | INFO     | ***************************************
[2025-07-25 20:42:01] 2025-07-25 18:41:41,260 | INFO     | executing command: df -mP /scratch/boinc/var/slot100/slots/0
[2025-07-25 20:42:01] 2025-07-25 18:41:41,282 | INFO     | sufficient remaining disk space (3228949282816 B)
[2025-07-25 20:42:01] 2025-07-25 18:41:41,282 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-25 20:42:01] 2025-07-25 18:41:41,283 | INFO     | current server update state: UPDATING_FINAL
[2025-07-25 20:42:01] 2025-07-25 18:41:41,283 | INFO     | update_server=False
[2025-07-25 20:42:01] 2025-07-25 18:41:41,283 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-25 20:42:01] 2025-07-25 18:41:41,283 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-25 20:42:01] 2025-07-25 18:41:41,284 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-07-25 20:42:01] 2025-07-25 18:41:41,284 | INFO     | found 0 job(s) in 20 queues
[2025-07-25 20:42:01] 2025-07-25 18:41:41,284 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-25 20:42:01] 2025-07-25 18:41:41,284 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-25 20:42:01] 2025-07-25 18:41:41,297 | INFO     | all data control threads have been joined
[2025-07-25 20:42:01] 2025-07-25 18:41:41,385 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-25 20:42:01] 2025-07-25 18:41:41,385 | INFO     | aborting loop
[2025-07-25 20:42:01] 2025-07-25 18:41:41,834 | INFO     | all payload control threads have been joined
[2025-07-25 20:42:01] 2025-07-25 18:41:42,288 | INFO     | [job] retrieve thread has finished
[2025-07-25 20:42:01] 2025-07-25 18:41:42,303 | INFO     | [data] control thread has finished
[2025-07-25 20:42:01] 2025-07-25 18:41:42,332 | INFO     | [job] validate thread has finished
[2025-07-25 20:42:01] 2025-07-25 18:41:42,348 | INFO     | [job] create_data_payload thread has finished
[2025-07-25 20:42:01] 2025-07-25 18:41:42,391 | INFO     | [job] job monitor thread has finished
[2025-07-25 20:42:01] 2025-07-25 18:41:42,505 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-25 20:42:01] 2025-07-25 18:41:42,512 | INFO     | [payload] validate_pre thread has finished
[2025-07-25 20:42:01] 2025-07-25 18:41:42,715 | INFO     | [data] copytool_in thread has finished
[2025-07-25 20:42:01] 2025-07-25 18:41:42,839 | INFO     | [payload] control thread has finished
[2025-07-25 20:42:01] 2025-07-25 18:41:42,979 | INFO     | all job control threads have been joined
[2025-07-25 20:42:01] 2025-07-25 18:41:43,289 | INFO     | [data] copytool_out thread has finished
[2025-07-25 20:42:01] 2025-07-25 18:41:43,308 | INFO     | [payload] validate_post thread has finished
[2025-07-25 20:42:01] 2025-07-25 18:41:43,510 | INFO     | [job] queue monitor thread has finished
[2025-07-25 20:42:01] 2025-07-25 18:41:43,532 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-25 20:42:01] 2025-07-25 18:41:43,658 | INFO     | [payload] execute_payloads thread has finished
[2025-07-25 20:42:01] 2025-07-25 18:41:43,827 | INFO     | [payload] failed_post thread has finished
[2025-07-25 20:42:01] 2025-07-25 18:41:43,984 | INFO     | [job] control thread has finished
[2025-07-25 20:42:01] 2025-07-25 18:41:47,538 | INFO     | [data] queue_monitor thread has finished
[2025-07-25 20:42:01] 2025-07-25 18:41:51,565 | INFO     | job.realtimelogging is not enabled
[2025-07-25 20:42:01] 2025-07-25 18:41:52,570 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-25 20:42:01] 2025-07-25 18:41:53,570 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22769058690880)>', '<ExcThread(monitor, started 22768743573248)>']
[2025-07-25 20:42:01] 2025-07-25 18:41:54,331 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-25 20:42:01] 2025-07-25 18:41:54,332 | INFO     | [monitor] control thread has ended
[2025-07-25 20:42:01] 2025-07-25 18:41:58,595 | INFO     | all workflow threads have been joined
[2025-07-25 20:42:01] 2025-07-25 18:41:58,595 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-25 20:42:01] 2025-07-25 18:41:58,595 | INFO     | traces error code: 0
[2025-07-25 20:42:01] 2025-07-25 18:41:58,595 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-25 20:42:01] 2025-07-25 18:41:58,751 [wrapper] ==== pilot stdout END ====
[2025-07-25 20:42:01] 2025-07-25 18:41:58,755 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-25 20:42:01] 2025-07-25 18:41:58,758 [wrapper] pilotpid: 1745671
[2025-07-25 20:42:01] 2025-07-25 18:41:58,761 [wrapper] Pilot exit status: 0
[2025-07-25 20:42:01] 2025-07-25 18:41:58,773 [wrapper] pandaids: 6741712287
[2025-07-25 20:42:01] 2025-07-25 18:41:58,892 [wrapper] cleanup supervisor_pilot 2380682 1745672
[2025-07-25 20:42:01] 2025-07-25 18:41:58,895 [wrapper] Test setup, not cleaning
[2025-07-25 20:42:01] 2025-07-25 18:41:58,899 [wrapper] apfmon messages muted
[2025-07-25 20:42:01] 2025-07-25 18:41:58,903 [wrapper] ==== wrapper stdout END ====
[2025-07-25 20:42:01] 2025-07-25 18:41:58,906 [wrapper] ==== wrapper stderr END ====
[2025-07-25 20:42:01]  *** Error codes and diagnostics ***
[2025-07-25 20:42:01]     "exeErrorCode": 0,
[2025-07-25 20:42:01]     "exeErrorDiag": "",
[2025-07-25 20:42:01]     "pilotErrorCode": 0,
[2025-07-25 20:42:01]     "pilotErrorDiag": "",
[2025-07-25 20:42:01]  *** Listing of results directory ***
[2025-07-25 20:42:01] total 567108
[2025-07-25 20:42:01] -rw-r--r-- 1 boinc boinc    530466 Jul 22 03:48 pilot3.tar.gz
[2025-07-25 20:42:01] -rw-r--r-- 1 boinc boinc      5112 Jul 22 03:54 queuedata.json
[2025-07-25 20:42:01] -rwx------ 1 boinc boinc     36292 Jul 22 03:54 runpilot2-wrapper.sh
[2025-07-25 20:42:01] -rw-r--r-- 1 boinc boinc       100 Jul 25 17:30 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-25 20:42:01] -rwxr-xr-x 1 boinc boinc      7986 Jul 25 17:30 run_atlas
[2025-07-25 20:42:01] -rw-r--r-- 1 boinc boinc       105 Jul 25 17:30 job.xml
[2025-07-25 20:42:01] -rw-r--r-- 1 boinc boinc      6686 Jul 25 17:30 init_data.xml
[2025-07-25 20:42:01] -rw-r--r-- 2 boinc boinc 316542289 Jul 25 17:30 EVNT.45697451._000127.pool.root.1
[2025-07-25 20:42:01] -rw-r--r-- 2 boinc boinc     15095 Jul 25 17:30 start_atlas.sh
[2025-07-25 20:42:01] drwxrwx--x 2 boinc boinc      4096 Jul 25 17:30 shared
[2025-07-25 20:42:01] -rw-r--r-- 2 boinc boinc    542902 Jul 25 17:30 input.tar.gz
[2025-07-25 20:42:01] -rw-r--r-- 1 boinc boinc         0 Jul 25 17:30 boinc_lockfile
[2025-07-25 20:42:01] -rw-r--r-- 1 boinc boinc      2634 Jul 25 17:30 pandaJob.out
[2025-07-25 20:42:01] -rw------- 1 boinc boinc    979317 Jul 25 17:30 agis_schedconf.cvmfs.json
[2025-07-25 20:42:01] drwx------ 4 boinc boinc      4096 Jul 25 17:30 pilot3
[2025-07-25 20:42:01] -rw------- 1 boinc boinc        95 Jul 25 20:40 pilot_heartbeat.json
[2025-07-25 20:42:01] -rw------- 1 boinc boinc 257544326 Jul 25 20:40 HITS.45697453._003163.pool.root.1
[2025-07-25 20:42:01] -rw-r--r-- 1 boinc boinc       530 Jul 25 20:40 boinc_task_state.xml
[2025-07-25 20:42:01] -rw------- 1 boinc boinc      1035 Jul 25 20:41 memory_monitor_summary.json
[2025-07-25 20:42:01] -rw------- 1 boinc boinc   1593052 Jul 25 20:41 agis_ddmendpoints.agis.ALL.json
[2025-07-25 20:42:01] -rw------- 1 boinc boinc    314725 Jul 25 20:41 log.45697453._003163.job.log.tgz.1
[2025-07-25 20:42:01] -rw------- 1 boinc boinc      7787 Jul 25 20:41 heartbeat.json
[2025-07-25 20:42:01] -rw------- 1 boinc boinc      4564 Jul 25 20:41 pilotlog.txt
[2025-07-25 20:42:01] -rw-r--r-- 1 boinc boinc        27 Jul 25 20:41 wrapper_checkpoint.txt
[2025-07-25 20:42:01] -rw------- 1 boinc boinc   1061134 Jul 25 20:41 log.45697453._003163.job.log.1
[2025-07-25 20:42:01] -rw------- 1 boinc boinc       357 Jul 25 20:41 output.list
[2025-07-25 20:42:01] -rw-r--r-- 1 boinc boinc       620 Jul 25 20:41 runtime_log
[2025-07-25 20:42:01] -rw------- 1 boinc boinc   1392640 Jul 25 20:41 result.tar.gz
[2025-07-25 20:42:01] -rw------- 1 boinc boinc       664 Jul 25 20:41 xFUKDmROHy7n9Rq4apOajLDm4fhM0noT9bVof3QYDm0CuKDmz1Gpjm.diag
[2025-07-25 20:42:01] -rw-r--r-- 1 boinc boinc      9042 Jul 25 20:41 runtime_log.err
[2025-07-25 20:42:01] -rw-r--r-- 1 boinc boinc      8192 Jul 25 20:42 boinc_mmap_file
[2025-07-25 20:42:01] -rw-r--r-- 1 boinc boinc     20769 Jul 25 20:42 stderr.txt
[2025-07-25 20:42:01] HITS file was successfully produced:
[2025-07-25 20:42:01] -rw------- 1 boinc boinc 257544326 Jul 25 20:40 shared/HITS.pool.root.1
[2025-07-25 20:42:01]  *** Contents of shared directory: ***
[2025-07-25 20:42:01] total 562552
[2025-07-25 20:42:01] -rw-r--r-- 2 boinc boinc 316542289 Jul 25 17:30 ATLAS.root_0
[2025-07-25 20:42:01] -rw-r--r-- 2 boinc boinc     15095 Jul 25 17:30 start_atlas.sh
[2025-07-25 20:42:01] -rw-r--r-- 2 boinc boinc    542902 Jul 25 17:30 input.tar.gz
[2025-07-25 20:42:01] -rw------- 1 boinc boinc 257544326 Jul 25 20:40 HITS.pool.root.1
[2025-07-25 20:42:01] -rw------- 1 boinc boinc   1392640 Jul 25 20:41 result.tar.gz
20:42:02 (1741753): run_atlas exited; CPU time 44565.916353
20:42:02 (1741753): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN