Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
07:39:58 (1199792): wrapper (7.7.26015): starting
07:39:58 (1199792): wrapper: running run_atlas (--nthreads 8)
[2025-07-23 07:39:58] Arguments: --nthreads 8
[2025-07-23 07:39:58] Threads: 8
[2025-07-23 07:39:58] Checking for CVMFS
[2025-07-23 07:39:58] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-23 07:39:58] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-23 07:39:58] Running cvmfs_config stat atlas.cern.ch
[2025-07-23 07:39:58] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-23 07:39:58] 2.13.1.0 665382 2363 81364 148657 2 188 33088465 40960000 13687 16776704 0 33386870 99.999 85705 57136 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-07-23 07:39:58] CVMFS is ok
[2025-07-23 07:39:58] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-07-23 07:39:58] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-07-23 07:39:58] Further information can be found at the LHC@home message board.
[2025-07-23 07:39:58] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-23 07:39:58] Checking for apptainer binary...
[2025-07-23 07:39:58] Using apptainer found in PATH at /usr/bin/apptainer
[2025-07-23 07:39:58] Running /usr/bin/apptainer --version
[2025-07-23 07:39:58] apptainer version 1.4.1-1.el9
[2025-07-23 07:39:58] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-23 07:39:59] c-208-40.aglt2.org
[2025-07-23 07:39:59] apptainer works
[2025-07-23 07:39:59] Set ATHENA_PROC_NUMBER=8
[2025-07-23 07:39:59] Set ATHENA_CORE_NUMBER=8
[2025-07-23 07:39:59] Starting ATLAS job with PandaID=6741692798
[2025-07-23 07:39:59] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/7 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-23 09:00:10]  *** The last 200 lines of the pilot log: ***
[2025-07-23 09:00:10]  workdir=None
[2025-07-23 09:00:10] ]
[2025-07-23 09:00:10] 2025-07-23 12:59:30,142 | INFO     | transferring file log.45697541._000198.job.log.tgz.1 from /tmp/boinchome/slots/7/PanDA_Pilot-6741692798/log.45697541._000198.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-07-23 09:00:10] 2025-07-23 12:59:30,142 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/7/PanDA_Pilot-6741692798/log.45697541._000198.job.log.tgz.1 /tmp/boinchome/slots/7/log.45697541._000198.job
[2025-07-23 09:00:10] 2025-07-23 12:59:30,158 | INFO     | adding to output.list: log.45697541._000198.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/de/2a/log.45697541._000198.job.log.tg
[2025-07-23 09:00:10] 2025-07-23 12:59:30,158 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-07-23 09:00:10] 2025-07-23 12:59:30,158 | INFO     | summary of transferred files:
[2025-07-23 09:00:10] 2025-07-23 12:59:30,158 | INFO     |  -- lfn=log.45697541._000198.job.log.tgz.1, status_code=0, status=transferred
[2025-07-23 09:00:10] 2025-07-23 12:59:30,159 | INFO     | stage-out finished correctly
[2025-07-23 09:00:10] 2025-07-23 12:59:32,081 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-07-23 09:00:10] 2025-07-23 12:59:32,622 | WARNING  | process 1210063 can no longer be monitored (due to stat problems) - aborting
[2025-07-23 09:00:10] 2025-07-23 12:59:32,622 | INFO     | using path: /tmp/boinchome/slots/7/PanDA_Pilot-6741692798/memory_monitor_summary.json (trf name=prmon)
[2025-07-23 09:00:10] 2025-07-23 12:59:32,623 | INFO     | payload log (log.EVNTtoHITS) within allowed size limit (2147483648 B): 3696304 B
[2025-07-23 09:00:10] 2025-07-23 12:59:32,623 | INFO     | payload log (payload.stdout) within allowed size limit (2147483648 B): 15526 B
[2025-07-23 09:00:10] 2025-07-23 12:59:32,623 | INFO     | executing command: df -mP /tmp/boinchome/slots/7
[2025-07-23 09:00:10] 2025-07-23 12:59:32,637 | INFO     | sufficient remaining disk space (159520915456 B)
[2025-07-23 09:00:10] 2025-07-23 12:59:32,637 | INFO     | work directory size check will use 2537553920 B as a max limit (10% grace limit added)
[2025-07-23 09:00:10] 2025-07-23 12:59:32,638 | INFO     | size of work directory /tmp/boinchome/slots/7/PanDA_Pilot-6741692798: 3995241 B (within 2537553920 B limit)
[2025-07-23 09:00:10] 2025-07-23 12:59:32,638 | INFO     | pfn file=/tmp/boinchome/slots/7/PanDA_Pilot-6741692798/HITS.45697541._000198.pool.root.1 does not exist (skip from workdir size calculation)
[2025-07-23 09:00:10] 2025-07-23 12:59:32,638 | INFO     | total size of present files: 0 B (workdir size: 3995241 B)
[2025-07-23 09:00:10] 2025-07-23 12:59:32,638 | INFO     | output file size check: skipping output file /tmp/boinchome/slots/7/PanDA_Pilot-6741692798/HITS.45697541._000198.pool.root.1 since it does not exist
[2025-07-23 09:00:10] 2025-07-23 12:59:32,988 | INFO     | number of running child processes to parent process 1210063: 1
[2025-07-23 09:00:10] 2025-07-23 12:59:32,988 | INFO     | maximum number of monitored processes: 6
[2025-07-23 09:00:10] 2025-07-23 12:59:34,814 | INFO     | job 6741692798 has state=finished
[2025-07-23 09:00:10] 2025-07-23 12:59:34,814 | INFO     | preparing for final server update for job 6741692798 in state='finished'
[2025-07-23 09:00:10] 2025-07-23 12:59:34,814 | INFO     | this job has now completed (state=finished)
[2025-07-23 09:00:10] 2025-07-23 12:59:34,814 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-07-23 09:00:10] 2025-07-23 12:59:34,814 | INFO     | log transfer has been attempted: DONE
[2025-07-23 09:00:10] 2025-07-23 12:59:34,814 | INFO     | job 6741692798 has finished - writing final server update
[2025-07-23 09:00:10] 2025-07-23 12:59:34,814 | INFO     | total number of processed events: 400 (read)
[2025-07-23 09:00:10] 2025-07-23 12:59:34,815 | INFO     | executing command: lscpu
[2025-07-23 09:00:10] 2025-07-23 12:59:34,867 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-07-23 09:00:10] 2025-07-23 12:59:35,491 | INFO     | monitor loop #344: job 0:6741692798 is in state 'finished'
[2025-07-23 09:00:10] 2025-07-23 12:59:35,491 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-23 09:00:10] 2025-07-23 12:59:37,918 | INFO     | CPU arch script returned: x86-64-v4
[2025-07-23 09:00:10] 2025-07-23 12:59:37,923 | INFO     | found 64 cores (32 cores per socket, 2 sockets) HT, CPU MHz: 3739.215875000002
[2025-07-23 09:00:10] 2025-07-23 12:59:37,935 | INFO     | using path: /tmp/boinchome/slots/7/PanDA_Pilot-6741692798/memory_monitor_summary.json (trf name=prmon)
[2025-07-23 09:00:10] 2025-07-23 12:59:37,935 | INFO     | extracted standard info from prmon json
[2025-07-23 09:00:10] 2025-07-23 12:59:37,935 | INFO     | extracted standard memory fields from prmon json
[2025-07-23 09:00:10] 2025-07-23 12:59:37,935 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-23 09:00:10] 2025-07-23 12:59:37,936 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-23 09:00:10] 2025-07-23 12:59:37,936 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-23 09:00:10] 2025-07-23 12:59:37,937 | INFO     | fitting pss+swap vs Time
[2025-07-23 09:00:10] 2025-07-23 12:59:37,937 | INFO     | sum of square deviations: 110960220.0
[2025-07-23 09:00:10] 2025-07-23 12:59:37,937 | INFO     | sum of deviations: -102433945.00000001
[2025-07-23 09:00:10] 2025-07-23 12:59:37,937 | INFO     | mean x: 1753273272.0
[2025-07-23 09:00:10] 2025-07-23 12:59:37,937 | INFO     | mean y: 2596067.1830985914
[2025-07-23 09:00:10] 2025-07-23 12:59:37,937 | INFO     | -- intersect: 1621146372.0943367
[2025-07-23 09:00:10] 2025-07-23 12:59:37,937 | INFO     | intersect: 1621146372.0943367
[2025-07-23 09:00:10] 2025-07-23 12:59:37,937 | INFO     | chi2: 0.0013207518730718895
[2025-07-23 09:00:10] 2025-07-23 12:59:37,937 | INFO     | -- intersect: 1621146372.0943367
[2025-07-23 09:00:10] 2025-07-23 12:59:37,937 | INFO     | current memory leak: -0.92 B/s (using 71 data points, chi2=0.00)
[2025-07-23 09:00:10] 2025-07-23 12:59:37,938 | INFO     | could have reported an average CPU frequency of 3777 MHz (6 samples)
[2025-07-23 09:00:10] 2025-07-23 12:59:37,938 | INFO     | ..............................
[2025-07-23 09:00:10] 2025-07-23 12:59:37,938 | INFO     | . Timing measurements:
[2025-07-23 09:00:10] 2025-07-23 12:59:37,938 | INFO     | . get job = 0 s
[2025-07-23 09:00:10] 2025-07-23 12:59:37,938 | INFO     | . initial setup = 2 s
[2025-07-23 09:00:10] 2025-07-23 12:59:37,938 | INFO     | . payload setup = 5 s
[2025-07-23 09:00:10] 2025-07-23 12:59:37,938 | INFO     | . stage-in = 0 s
[2025-07-23 09:00:10] 2025-07-23 12:59:37,938 | INFO     | . payload execution = 4738 s
[2025-07-23 09:00:10] 2025-07-23 12:59:37,938 | INFO     | . stage-out = 0 s
[2025-07-23 09:00:10] 2025-07-23 12:59:37,938 | INFO     | . log creation = 0 s
[2025-07-23 09:00:10] 2025-07-23 12:59:37,938 | INFO     | ..............................
[2025-07-23 09:00:10] 2025-07-23 12:59:37,991 | INFO     | 
[2025-07-23 09:00:10] 2025-07-23 12:59:37,992 | INFO     | job summary report
[2025-07-23 09:00:10] 2025-07-23 12:59:37,992 | INFO     | --------------------------------------------------
[2025-07-23 09:00:10] 2025-07-23 12:59:37,992 | INFO     | PanDA job id: 6741692798
[2025-07-23 09:00:10] 2025-07-23 12:59:37,992 | INFO     | task id: 45697541
[2025-07-23 09:00:10] 2025-07-23 12:59:37,992 | INFO     | errors: (none)
[2025-07-23 09:00:10] 2025-07-23 12:59:37,992 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-23 09:00:10] 2025-07-23 12:59:37,992 | INFO     | pilot state: finished 
[2025-07-23 09:00:10] 2025-07-23 12:59:37,992 | INFO     | transexitcode: 0
[2025-07-23 09:00:10] 2025-07-23 12:59:37,992 | INFO     | exeerrorcode: 0
[2025-07-23 09:00:10] 2025-07-23 12:59:37,992 | INFO     | exeerrordiag: 
[2025-07-23 09:00:10] 2025-07-23 12:59:37,992 | INFO     | exitcode: 0
[2025-07-23 09:00:10] 2025-07-23 12:59:37,992 | INFO     | exitmsg: OK
[2025-07-23 09:00:10] 2025-07-23 12:59:37,992 | INFO     | cpuconsumptiontime: 35814 s
[2025-07-23 09:00:10] 2025-07-23 12:59:37,992 | INFO     | nevents: 400
[2025-07-23 09:00:10] 2025-07-23 12:59:37,992 | INFO     | neventsw: 0
[2025-07-23 09:00:10] 2025-07-23 12:59:37,992 | INFO     | pid: 1210063
[2025-07-23 09:00:10] 2025-07-23 12:59:37,992 | INFO     | pgrp: 1210063
[2025-07-23 09:00:10] 2025-07-23 12:59:37,992 | INFO     | corecount: 8
[2025-07-23 09:00:10] 2025-07-23 12:59:37,992 | INFO     | event service: False
[2025-07-23 09:00:10] 2025-07-23 12:59:37,992 | INFO     | sizes: {0: 2397497, 4: 2397759, 11: 2397787, 4747: 2433068, 4749: 2433068, 4755: 2433290}
[2025-07-23 09:00:10] 2025-07-23 12:59:37,992 | INFO     | --------------------------------------------------
[2025-07-23 09:00:10] 2025-07-23 12:59:37,993 | INFO     | 
[2025-07-23 09:00:10] 2025-07-23 12:59:37,993 | INFO     | executing command: ls -lF /tmp/boinchome/slots/7
[2025-07-23 09:00:10] 2025-07-23 12:59:38,006 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-23 09:00:10] 2025-07-23 12:59:38,007 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-23 09:00:10] 2025-07-23 12:59:38,007 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-23 09:00:10] 2025-07-23 12:59:38,007 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-23 09:00:10] 2025-07-23 12:59:38,007 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-23 09:00:10] 2025-07-23 12:59:38,007 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-23 09:00:10] 2025-07-23 12:59:38,007 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-23 09:00:10] 2025-07-23 12:59:38,007 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-23 09:00:10] 2025-07-23 12:59:38,007 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-23 09:00:10] 2025-07-23 12:59:38,007 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-23 09:00:10] 2025-07-23 12:59:38,007 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-23 09:00:10] 2025-07-23 12:59:38,007 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-23 09:00:10] 2025-07-23 12:59:38,007 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-23 09:00:10] 2025-07-23 12:59:38,007 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-23 09:00:10] 2025-07-23 12:59:38,007 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-23 09:00:10] 2025-07-23 12:59:38,007 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-23 09:00:10] 2025-07-23 12:59:38,007 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-23 09:00:10] 2025-07-23 12:59:38,007 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-23 09:00:10] 2025-07-23 12:59:38,007 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-23 09:00:10] 2025-07-23 12:59:38,007 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-23 09:00:10] 2025-07-23 12:59:38,007 | INFO     | job 6741692798 has completed (purged errors)
[2025-07-23 09:00:10] 2025-07-23 12:59:38,007 | INFO     | overall cleanup function is called
[2025-07-23 09:00:10] 2025-07-23 12:59:39,015 | INFO     | --- collectZombieJob: --- 10, [1210063]
[2025-07-23 09:00:10] 2025-07-23 12:59:39,015 | INFO     | zombie collector waiting for pid 1210063
[2025-07-23 09:00:10] 2025-07-23 12:59:39,015 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-23 09:00:10] 2025-07-23 12:59:39,015 | INFO     | collected zombie processes
[2025-07-23 09:00:10] 2025-07-23 12:59:39,015 | INFO     | will attempt to kill all subprocesses of pid=1210063
[2025-07-23 09:00:10] 2025-07-23 12:59:39,347 | INFO     | process IDs to be killed: [1210063] (in reverse order)
[2025-07-23 09:00:10] 2025-07-23 12:59:39,462 | WARNING  | found no corresponding commands to process id(s)
[2025-07-23 09:00:10] 2025-07-23 12:59:39,462 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-23 09:00:10] 2025-07-23 12:59:39,477 | INFO     | did not find any defunct processes belonging to 1210063
[2025-07-23 09:00:10] 2025-07-23 12:59:39,489 | INFO     | did not find any defunct processes belonging to 1210063
[2025-07-23 09:00:10] 2025-07-23 12:59:39,489 | INFO     | ready for new job
[2025-07-23 09:00:10] 2025-07-23 12:59:39,489 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-23 09:00:10] 2025-07-23 12:59:39,490 | INFO     | ***************************************
[2025-07-23 09:00:10] 2025-07-23 12:59:39,490 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-23 09:00:10] 2025-07-23 12:59:39,490 | INFO     | ***************************************
[2025-07-23 09:00:10] 2025-07-23 12:59:39,490 | INFO     | 
[2025-07-23 09:00:10] 2025-07-23 12:59:39,495 | INFO     | architecture information:
[2025-07-23 09:00:10] 2025-07-23 12:59:39,495 | INFO     | executing command: cat /etc/os-release
[2025-07-23 09:00:10] 2025-07-23 12:59:39,508 | INFO     | cat /etc/os-release:
[2025-07-23 09:00:10] NAME="CentOS Linux"
[2025-07-23 09:00:10] VERSION="7 (Core)"
[2025-07-23 09:00:10] ID="centos"
[2025-07-23 09:00:10] ID_LIKE="rhel fedora"
[2025-07-23 09:00:10] VERSION_ID="7"
[2025-07-23 09:00:10] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-23 09:00:10] ANSI_COLOR="0;31"
[2025-07-23 09:00:10] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-23 09:00:10] HOME_URL="https://www.centos.org/"
[2025-07-23 09:00:10] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-23 09:00:10] 
[2025-07-23 09:00:10] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-23 09:00:10] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-23 09:00:10] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-23 09:00:10] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-23 09:00:10] 
[2025-07-23 09:00:10] 2025-07-23 12:59:39,508 | INFO     | ***************************************
[2025-07-23 09:00:10] 2025-07-23 12:59:40,011 | INFO     | executing command: df -mP /tmp/boinchome/slots/7
[2025-07-23 09:00:10] 2025-07-23 12:59:40,027 | INFO     | sufficient remaining disk space (159515672576 B)
[2025-07-23 09:00:10] 2025-07-23 12:59:40,027 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-23 09:00:10] 2025-07-23 12:59:40,027 | INFO     | current server update state: UPDATING_FINAL
[2025-07-23 09:00:10] 2025-07-23 12:59:40,027 | INFO     | update_server=False
[2025-07-23 09:00:10] 2025-07-23 12:59:40,027 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-23 09:00:10] 2025-07-23 12:59:40,497 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-07-23 09:00:10] 2025-07-23 12:59:40,498 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-07-23 09:00:10] 2025-07-23 12:59:40,498 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-23 09:00:10] 2025-07-23 12:59:40,498 | INFO     | will abort loop
[2025-07-23 09:00:10] 2025-07-23 12:59:40,604 | INFO     | all job control threads have been joined
[2025-07-23 09:00:10] 2025-07-23 12:59:40,662 | INFO     | all data control threads have been joined
[2025-07-23 09:00:10] 2025-07-23 12:59:40,725 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-23 09:00:10] 2025-07-23 12:59:41,033 | INFO     | [job] retrieve thread has finished
[2025-07-23 09:00:10] 2025-07-23 12:59:41,073 | INFO     | [payload] execute_payloads thread has finished
[2025-07-23 09:00:10] 2025-07-23 12:59:41,157 | INFO     | all payload control threads have been joined
[2025-07-23 09:00:10] 2025-07-23 12:59:41,443 | INFO     | [data] copytool_in thread has finished
[2025-07-23 09:00:10] 2025-07-23 12:59:41,502 | INFO     | [job] job monitor thread has finished
[2025-07-23 09:00:10] 2025-07-23 12:59:41,609 | INFO     | [job] control thread has finished
[2025-07-23 09:00:10] 2025-07-23 12:59:41,663 | INFO     | [data] control thread has finished
[2025-07-23 09:00:10] 2025-07-23 12:59:41,837 | INFO     | [payload] validate_post thread has finished
[2025-07-23 09:00:10] 2025-07-23 12:59:42,124 | INFO     | [job] validate thread has finished
[2025-07-23 09:00:10] 2025-07-23 12:59:42,163 | INFO     | [payload] control thread has finished
[2025-07-23 09:00:10] 2025-07-23 12:59:42,211 | INFO     | [job] create_data_payload thread has finished
[2025-07-23 09:00:10] 2025-07-23 12:59:42,434 | INFO     | [payload] failed_post thread has finished
[2025-07-23 09:00:10] 2025-07-23 12:59:42,435 | INFO     | [payload] validate_pre thread has finished
[2025-07-23 09:00:10] 2025-07-23 12:59:42,645 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-23 09:00:10] 2025-07-23 12:59:42,732 | INFO     | [data] copytool_out thread has finished
[2025-07-23 09:00:10] 2025-07-23 12:59:43,002 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-23 09:00:10] 2025-07-23 12:59:44,005 | INFO     | [job] queue monitor thread has finished
[2025-07-23 09:00:10] 2025-07-23 12:59:46,648 | INFO     | [data] queue_monitor thread has finished
[2025-07-23 09:00:10] 2025-07-23 12:59:50,550 | INFO     | job.realtimelogging is not enabled
[2025-07-23 09:00:10] 2025-07-23 12:59:51,550 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-23 09:00:10] 2025-07-23 12:59:51,709 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140496923260736)>', '<ExcThread(monitor, started 140496164878080)>']
[2025-07-23 09:00:10] 2025-07-23 12:59:56,734 | INFO     | all workflow threads have been joined
[2025-07-23 09:00:10] 2025-07-23 12:59:56,734 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-23 09:00:10] 2025-07-23 12:59:56,734 | INFO     | traces error code: 0
[2025-07-23 09:00:10] 2025-07-23 12:59:56,734 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-23 09:00:10] 2025-07-23 13:00:10,500 | INFO     | PID=1203598 has CPU usage=4.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-07-23 09:00:10] 2025-07-23 13:00:10,500 | INFO     | .. there are 16 such processes running
[2025-07-23 09:00:10] 2025-07-23 13:00:10,501 | INFO     | found 0 job(s) in 20 queues
[2025-07-23 09:00:10] 2025-07-23 13:00:10,501 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-23 09:00:10] 2025-07-23 13:00:10,501 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-23 09:00:10] 2025-07-23 13:00:10,501 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-23 09:00:10] 2025-07-23 13:00:10,501 | INFO     | [monitor] control thread has ended
[2025-07-23 09:00:10] 2025-07-23 13:00:10,579 [wrapper] ==== pilot stdout END ====
[2025-07-23 09:00:10] 2025-07-23 13:00:10,581 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-23 09:00:10] 2025-07-23 13:00:10,584 [wrapper] pilotpid: 1203598
[2025-07-23 09:00:10] 2025-07-23 13:00:10,586 [wrapper] Pilot exit status: 0
[2025-07-23 09:00:10] 2025-07-23 13:00:10,594 [wrapper] pandaids: 6741692798
[2025-07-23 09:00:10] 2025-07-23 13:00:10,674 [wrapper] cleanup supervisor_pilot 1585128 1203599
[2025-07-23 09:00:10] 2025-07-23 13:00:10,676 [wrapper] Test setup, not cleaning
[2025-07-23 09:00:10] 2025-07-23 13:00:10,679 [wrapper] apfmon messages muted
[2025-07-23 09:00:10] 2025-07-23 13:00:10,682 [wrapper] ==== wrapper stdout END ====
[2025-07-23 09:00:10] 2025-07-23 13:00:10,685 [wrapper] ==== wrapper stderr END ====
[2025-07-23 09:00:10]  *** Error codes and diagnostics ***
[2025-07-23 09:00:10]     "exeErrorCode": 0,
[2025-07-23 09:00:10]     "exeErrorDiag": "",
[2025-07-23 09:00:10]     "pilotErrorCode": 0,
[2025-07-23 09:00:10]     "pilotErrorDiag": "",
[2025-07-23 09:00:10]  *** Listing of results directory ***
[2025-07-23 09:00:10] total 639372
[2025-07-23 09:00:10] -rw-r--r--. 1 boincer umatlas    530466 Jul 21 17:26 pilot3.tar.gz
[2025-07-23 09:00:10] -rw-r--r--. 1 boincer umatlas      5112 Jul 21 17:33 queuedata.json
[2025-07-23 09:00:10] -rwx------. 1 boincer umatlas     36292 Jul 21 17:33 runpilot2-wrapper.sh
[2025-07-23 09:00:10] -rw-r--r--. 1 boincer umatlas       100 Jul 23 07:39 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-23 09:00:10] -rwxr-xr-x. 1 boincer umatlas      7986 Jul 23 07:39 run_atlas
[2025-07-23 09:00:10] -rw-r--r--. 1 boincer umatlas       105 Jul 23 07:39 job.xml
[2025-07-23 09:00:10] -rw-r--r--. 2 boincer umatlas 344025758 Jul 23 07:39 EVNT.45697539._000006.pool.root.1
[2025-07-23 09:00:10] -rw-r--r--. 2 boincer umatlas     15095 Jul 23 07:39 start_atlas.sh
[2025-07-23 09:00:10] drwxrwx--x. 2 boincer umatlas      4096 Jul 23 07:39 shared
[2025-07-23 09:00:10] -rw-r--r--. 2 boincer umatlas    542896 Jul 23 07:39 input.tar.gz
[2025-07-23 09:00:10] -rw-r--r--. 1 boincer umatlas         0 Jul 23 07:39 boinc_lockfile
[2025-07-23 09:00:10] -rw-r--r--. 1 boincer umatlas      2587 Jul 23 07:39 pandaJob.out
[2025-07-23 09:00:10] -rw-------. 1 boincer umatlas    978421 Jul 23 07:40 agis_schedconf.cvmfs.json
[2025-07-23 09:00:10] -rw-------. 1 boincer umatlas   1593041 Jul 23 07:40 agis_ddmendpoints.agis.ALL.json
[2025-07-23 09:00:10] drwx------. 4 boincer umatlas      4096 Jul 23 07:40 pilot3
[2025-07-23 09:00:10] -rw-r--r--. 1 boincer umatlas      7172 Jul 23 08:55 init_data.xml
[2025-07-23 09:00:10] -rw-r--r--. 1 boincer umatlas       529 Jul 23 08:59 boinc_task_state.xml
[2025-07-23 09:00:10] -rw-------. 1 boincer umatlas 305245421 Jul 23 08:59 HITS.45697541._000198.pool.root.1
[2025-07-23 09:00:10] -rw-------. 1 boincer umatlas      1031 Jul 23 08:59 memory_monitor_summary.json
[2025-07-23 09:00:10] -rw-------. 1 boincer umatlas    318479 Jul 23 08:59 log.45697541._000198.job.log.tgz.1
[2025-07-23 09:00:10] -rw-------. 1 boincer umatlas      7762 Jul 23 08:59 heartbeat.json
[2025-07-23 09:00:10] -rw-r--r--. 1 boincer umatlas      8192 Jul 23 09:00 boinc_mmap_file
[2025-07-23 09:00:10] -rw-r--r--. 1 boincer umatlas        27 Jul 23 09:00 wrapper_checkpoint.txt
[2025-07-23 09:00:10] -rw-------. 1 boincer umatlas        95 Jul 23 09:00 pilot_heartbeat.json
[2025-07-23 09:00:10] -rw-------. 1 boincer umatlas       823 Jul 23 09:00 pilotlog.txt
[2025-07-23 09:00:10] -rw-------. 1 boincer umatlas    466797 Jul 23 09:00 log.45697541._000198.job.log.1
[2025-07-23 09:00:10] -rw-------. 1 boincer umatlas       357 Jul 23 09:00 output.list
[2025-07-23 09:00:10] -rw-r--r--. 1 boincer umatlas       620 Jul 23 09:00 runtime_log
[2025-07-23 09:00:10] -rw-------. 1 boincer umatlas    808960 Jul 23 09:00 result.tar.gz
[2025-07-23 09:00:10] -rw-r--r--. 1 boincer umatlas      8660 Jul 23 09:00 runtime_log.err
[2025-07-23 09:00:10] -rw-------. 1 boincer umatlas       652 Jul 23 09:00 LKmMDmnJDy7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmfpGLDmKFHZWn.diag
[2025-07-23 09:00:10] -rw-r--r--. 1 boincer umatlas     22494 Jul 23 09:00 stderr.txt
[2025-07-23 09:00:10] HITS file was successfully produced:
[2025-07-23 09:00:10] -rw-------. 1 boincer umatlas 305245421 Jul 23 08:59 shared/HITS.pool.root.1
[2025-07-23 09:00:10]  *** Contents of shared directory: ***
[2025-07-23 09:00:10] total 635404
[2025-07-23 09:00:10] -rw-r--r--. 2 boincer umatlas 344025758 Jul 23 07:39 ATLAS.root_0
[2025-07-23 09:00:10] -rw-r--r--. 2 boincer umatlas     15095 Jul 23 07:39 start_atlas.sh
[2025-07-23 09:00:10] -rw-r--r--. 2 boincer umatlas    542896 Jul 23 07:39 input.tar.gz
[2025-07-23 09:00:10] -rw-------. 1 boincer umatlas 305245421 Jul 23 08:59 HITS.pool.root.1
[2025-07-23 09:00:10] -rw-------. 1 boincer umatlas    808960 Jul 23 09:00 result.tar.gz
09:00:12 (1199792): run_atlas exited; CPU time 35921.851694
09:00:12 (1199792): called boinc_finish(0)

</stderr_txt>
]]>

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