Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
21:15:54 (58134): wrapper (7.7.26015): starting
21:15:54 (58134): wrapper: running run_atlas (--nthreads 4)
[2025-07-25 21:15:54] Arguments: --nthreads 4
[2025-07-25 21:15:54] Threads: 4
[2025-07-25 21:15:54] Checking for CVMFS
[2025-07-25 21:15:54] No cvmfs_config command found, will try listing directly
[2025-07-25 21:15:54] CVMFS is ok
[2025-07-25 21:15:54] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-07-25 21:15:54] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-07-25 21:15:54] Further information can be found at the LHC@home message board.
[2025-07-25 21:15:54] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-25 21:15:54] Checking for apptainer binary...
[2025-07-25 21:15:54] which: no apptainer in ((null))
[2025-07-25 21:15:54] apptainer is not installed, using version from CVMFS
[2025-07-25 21:15:54] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-25 21:15:54] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot112/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut11.grid.cesnet.cz
[2025-07-25 21:15:54] apptainer works
[2025-07-25 21:15:54] Set ATHENA_PROC_NUMBER=4
[2025-07-25 21:15:54] Set ATHENA_CORE_NUMBER=4
[2025-07-25 21:15:54] Starting ATLAS job with PandaID=6743008412
[2025-07-25 21:15:54] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot112/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
23:25:56 (871633): wrapper (7.7.26015): starting
23:25:56 (871633): wrapper: running run_atlas (--nthreads 4)
[2025-07-25 23:25:56] Arguments: --nthreads 4
[2025-07-25 23:25:56] Threads: 4
[2025-07-25 23:25:56] This job has been restarted, cleaning up previous attempt
[2025-07-25 23:25:56] Checking for CVMFS
[2025-07-25 23:25:56] No cvmfs_config command found, will try listing directly
[2025-07-25 23:25:56] CVMFS is ok
[2025-07-25 23:25:56] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-07-25 23:25:56] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-07-25 23:25:56] Further information can be found at the LHC@home message board.
[2025-07-25 23:25:56] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-25 23:25:56] Checking for apptainer binary...
[2025-07-25 23:25:56] which: no apptainer in ((null))
[2025-07-25 23:25:56] apptainer is not installed, using version from CVMFS
[2025-07-25 23:25:56] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-25 23:25:56] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot112/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut11.grid.cesnet.cz
[2025-07-25 23:25:56] apptainer works
[2025-07-25 23:25:56] Set ATHENA_PROC_NUMBER=4
[2025-07-25 23:25:56] Set ATHENA_CORE_NUMBER=4
[2025-07-25 23:25:56] Starting ATLAS job with PandaID=6743008412
[2025-07-25 23:25:56] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot112/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-26 03:40:37]  *** The last 200 lines of the pilot log: ***
[2025-07-26 03:40:37] 2025-07-26 01:40:03,243 | INFO     | extracted standard memory fields from prmon json
[2025-07-26 03:40:37] 2025-07-26 01:40:03,243 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-26 03:40:37] 2025-07-26 01:40:03,243 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-26 03:40:37] 2025-07-26 01:40:03,243 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-26 03:40:37] 2025-07-26 01:40:03,247 | INFO     | fitting pss+swap vs Time
[2025-07-26 03:40:37] 2025-07-26 01:40:03,248 | INFO     | sum of square deviations: 4787066500.0
[2025-07-26 03:40:37] 2025-07-26 01:40:03,249 | INFO     | sum of deviations: 2491682006.000004
[2025-07-26 03:40:37] 2025-07-26 01:40:03,250 | INFO     | mean x: 1753486389.0
[2025-07-26 03:40:37] 2025-07-26 01:40:03,250 | INFO     | mean y: 2360597.0883534136
[2025-07-26 03:40:37] 2025-07-26 01:40:03,250 | INFO     | -- intersect: -910334157.2538358
[2025-07-26 03:40:37] 2025-07-26 01:40:03,250 | INFO     | intersect: -910334157.2538358
[2025-07-26 03:40:37] 2025-07-26 01:40:03,250 | INFO     | chi2: 2.303589320342831
[2025-07-26 03:40:37] 2025-07-26 01:40:03,251 | INFO     | sum of square deviations: 4504437945.0
[2025-07-26 03:40:37] 2025-07-26 01:40:03,252 | INFO     | sum of deviations: 18493570873.0
[2025-07-26 03:40:37] 2025-07-26 01:40:03,253 | INFO     | mean x: 1753486236.5
[2025-07-26 03:40:37] 2025-07-26 01:40:03,253 | INFO     | mean y: 2369086.5
[2025-07-26 03:40:37] 2025-07-26 01:40:03,253 | INFO     | -- intersect: -7196802571.650746
[2025-07-26 03:40:37] 2025-07-26 01:40:03,253 | INFO     | intersect: -7196802571.650746
[2025-07-26 03:40:37] 2025-07-26 01:40:03,253 | INFO     | chi2: 1.4515970140247767
[2025-07-26 03:40:37] 2025-07-26 01:40:03,253 | INFO     | current chi2=1.4515970140247767 (change=36.985425257626076 %)
[2025-07-26 03:40:37] 2025-07-26 01:40:03,254 | INFO     | sum of square deviations: 4233158440.0
[2025-07-26 03:40:37] 2025-07-26 01:40:03,255 | INFO     | sum of deviations: 17738068427.0
[2025-07-26 03:40:37] 2025-07-26 01:40:03,256 | INFO     | mean x: 1753486084.0
[2025-07-26 03:40:37] 2025-07-26 01:40:03,256 | INFO     | mean y: 2368661.8158995816
[2025-07-26 03:40:37] 2025-07-26 01:40:03,256 | INFO     | -- intersect: -7345207996.284397
[2025-07-26 03:40:37] 2025-07-26 01:40:03,256 | INFO     | intersect: -7345207996.284397
[2025-07-26 03:40:37] 2025-07-26 01:40:03,256 | INFO     | chi2: 1.451999692480624
[2025-07-26 03:40:37] 2025-07-26 01:40:03,256 | INFO     | current chi2=1.451999692480624 (change=-0.027740375046019547 %)
[2025-07-26 03:40:37] 2025-07-26 01:40:03,256 | INFO     | right removable region: 238
[2025-07-26 03:40:37] 2025-07-26 01:40:03,257 | INFO     | sum of square deviations: 4504437945.0
[2025-07-26 03:40:37] 2025-07-26 01:40:03,259 | INFO     | sum of deviations: -31081350007.99996
[2025-07-26 03:40:37] 2025-07-26 01:40:03,259 | INFO     | mean x: 1753486541.5
[2025-07-26 03:40:37] 2025-07-26 01:40:03,259 | INFO     | mean y: 2378525.7868852457
[2025-07-26 03:40:37] 2025-07-26 01:40:03,259 | INFO     | -- intersect: 12101719130.79523
[2025-07-26 03:40:37] 2025-07-26 01:40:03,259 | INFO     | intersect: 12101719130.79523
[2025-07-26 03:40:37] 2025-07-26 01:40:03,259 | INFO     | chi2: 0.9216532223664661
[2025-07-26 03:40:37] 2025-07-26 01:40:03,259 | INFO     | current chi2=0.9216532223664661 (change=59.990558463376566 %)
[2025-07-26 03:40:37] 2025-07-26 01:40:03,260 | INFO     | sum of square deviations: 4233158440.0
[2025-07-26 03:40:37] 2025-07-26 01:40:03,262 | INFO     | sum of deviations: -30646818399.0
[2025-07-26 03:40:37] 2025-07-26 01:40:03,262 | INFO     | mean x: 1753486694.0
[2025-07-26 03:40:37] 2025-07-26 01:40:03,262 | INFO     | mean y: 2378266.029288703
[2025-07-26 03:40:37] 2025-07-26 01:40:03,262 | INFO     | -- intersect: 12697104683.139462
[2025-07-26 03:40:37] 2025-07-26 01:40:03,262 | INFO     | intersect: 12697104683.139462
[2025-07-26 03:40:37] 2025-07-26 01:40:03,262 | INFO     | chi2: 0.9171024728068168
[2025-07-26 03:40:37] 2025-07-26 01:40:03,263 | INFO     | current chi2=0.9171024728068168 (change=0.49375941506119225 %)
[2025-07-26 03:40:37] 2025-07-26 01:40:03,263 | INFO     | left removable region: 20
[2025-07-26 03:40:37] 2025-07-26 01:40:03,263 | INFO     | sum of square deviations: 3212467674.5
[2025-07-26 03:40:37] 2025-07-26 01:40:03,265 | INFO     | sum of deviations: -6300556440.500004
[2025-07-26 03:40:37] 2025-07-26 01:40:03,265 | INFO     | mean x: 1753486663.5
[2025-07-26 03:40:37] 2025-07-26 01:40:03,265 | INFO     | mean y: 2381889.4357798165
[2025-07-26 03:40:37] 2025-07-26 01:40:03,265 | INFO     | -- intersect: 3441464492.116079
[2025-07-26 03:40:37] 2025-07-26 01:40:03,265 | INFO     | intersect: 3441464492.116079
[2025-07-26 03:40:37] 2025-07-26 01:40:03,265 | INFO     | chi2: 0.025473782361691462
[2025-07-26 03:40:37] 2025-07-26 01:40:03,265 | INFO     | -- intersect: 3441464492.116079
[2025-07-26 03:40:37] 2025-07-26 01:40:03,266 | INFO     | current memory leak: -1.96 B/s (using 218 data points, chi2=0.03)
[2025-07-26 03:40:37] 2025-07-26 01:40:03,266 | INFO     | could have reported an average CPU frequency of 2711 MHz (12 samples)
[2025-07-26 03:40:37] 2025-07-26 01:40:03,266 | INFO     | ..............................
[2025-07-26 03:40:37] 2025-07-26 01:40:03,266 | INFO     | . Timing measurements:
[2025-07-26 03:40:37] 2025-07-26 01:40:03,266 | INFO     | . get job = 0 s
[2025-07-26 03:40:37] 2025-07-26 01:40:03,266 | INFO     | . initial setup = 1 s
[2025-07-26 03:40:37] 2025-07-26 01:40:03,266 | INFO     | . payload setup = 14 s
[2025-07-26 03:40:37] 2025-07-26 01:40:03,267 | INFO     | . stage-in = 0 s
[2025-07-26 03:40:37] 2025-07-26 01:40:03,267 | INFO     | . payload execution = 15179 s
[2025-07-26 03:40:37] 2025-07-26 01:40:03,267 | INFO     | . stage-out = 1 s
[2025-07-26 03:40:37] 2025-07-26 01:40:03,267 | INFO     | . log creation = 0 s
[2025-07-26 03:40:37] 2025-07-26 01:40:03,267 | INFO     | ..............................
[2025-07-26 03:40:37] 2025-07-26 01:40:03,364 | INFO     | 
[2025-07-26 03:40:37] 2025-07-26 01:40:03,364 | INFO     | job summary report
[2025-07-26 03:40:37] 2025-07-26 01:40:03,365 | INFO     | --------------------------------------------------
[2025-07-26 03:40:37] 2025-07-26 01:40:03,365 | INFO     | PanDA job id: 6743008412
[2025-07-26 03:40:37] 2025-07-26 01:40:03,365 | INFO     | task id: 45697541
[2025-07-26 03:40:37] 2025-07-26 01:40:03,365 | INFO     | errors: (none)
[2025-07-26 03:40:37] 2025-07-26 01:40:03,365 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-26 03:40:37] 2025-07-26 01:40:03,365 | INFO     | pilot state: finished 
[2025-07-26 03:40:37] 2025-07-26 01:40:03,365 | INFO     | transexitcode: 0
[2025-07-26 03:40:37] 2025-07-26 01:40:03,365 | INFO     | exeerrorcode: 0
[2025-07-26 03:40:37] 2025-07-26 01:40:03,365 | INFO     | exeerrordiag: 
[2025-07-26 03:40:37] 2025-07-26 01:40:03,365 | INFO     | exitcode: 0
[2025-07-26 03:40:37] 2025-07-26 01:40:03,366 | INFO     | exitmsg: OK
[2025-07-26 03:40:37] 2025-07-26 01:40:03,366 | INFO     | cpuconsumptiontime: 58820 s
[2025-07-26 03:40:37] 2025-07-26 01:40:03,366 | INFO     | nevents: 400
[2025-07-26 03:40:37] 2025-07-26 01:40:03,366 | INFO     | neventsw: 0
[2025-07-26 03:40:37] 2025-07-26 01:40:03,366 | INFO     | pid: 883312
[2025-07-26 03:40:37] 2025-07-26 01:40:03,366 | INFO     | pgrp: 883312
[2025-07-26 03:40:37] 2025-07-26 01:40:03,366 | INFO     | corecount: 4
[2025-07-26 03:40:37] 2025-07-26 01:40:03,366 | INFO     | event service: False
[2025-07-26 03:40:37] 2025-07-26 01:40:03,367 | INFO     | sizes: {0: 2397304, 1: 2397559, 9: 2397821, 12: 2397849, 15197: 2429702, 15198: 2438908, 15205: 2439046}
[2025-07-26 03:40:37] 2025-07-26 01:40:03,367 | INFO     | --------------------------------------------------
[2025-07-26 03:40:37] 2025-07-26 01:40:03,367 | INFO     | 
[2025-07-26 03:40:37] 2025-07-26 01:40:03,367 | INFO     | executing command: ls -lF /scratch/boinc/var/slot112/slots/0
[2025-07-26 03:40:37] 2025-07-26 01:40:03,398 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-26 03:40:37] 2025-07-26 01:40:03,399 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-26 03:40:37] 2025-07-26 01:40:03,399 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-26 03:40:37] 2025-07-26 01:40:03,399 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-26 03:40:37] 2025-07-26 01:40:03,399 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-26 03:40:37] 2025-07-26 01:40:03,399 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-26 03:40:37] 2025-07-26 01:40:03,399 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-26 03:40:37] 2025-07-26 01:40:03,400 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-26 03:40:37] 2025-07-26 01:40:03,400 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-26 03:40:37] 2025-07-26 01:40:03,400 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-26 03:40:37] 2025-07-26 01:40:03,400 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-26 03:40:37] 2025-07-26 01:40:03,400 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-26 03:40:37] 2025-07-26 01:40:03,400 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-26 03:40:37] 2025-07-26 01:40:03,400 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-26 03:40:37] 2025-07-26 01:40:03,400 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-26 03:40:37] 2025-07-26 01:40:03,400 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-26 03:40:37] 2025-07-26 01:40:03,401 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-26 03:40:37] 2025-07-26 01:40:03,401 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-26 03:40:37] 2025-07-26 01:40:03,401 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-26 03:40:37] 2025-07-26 01:40:03,401 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-26 03:40:37] 2025-07-26 01:40:03,401 | INFO     | job 6743008412 has completed (purged errors)
[2025-07-26 03:40:37] 2025-07-26 01:40:03,401 | INFO     | overall cleanup function is called
[2025-07-26 03:40:37] 2025-07-26 01:40:04,411 | INFO     | --- collectZombieJob: --- 10, [883312]
[2025-07-26 03:40:37] 2025-07-26 01:40:04,411 | INFO     | zombie collector waiting for pid 883312
[2025-07-26 03:40:37] 2025-07-26 01:40:04,412 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-26 03:40:37] 2025-07-26 01:40:04,412 | INFO     | collected zombie processes
[2025-07-26 03:40:37] 2025-07-26 01:40:04,412 | INFO     | will attempt to kill all subprocesses of pid=883312
[2025-07-26 03:40:37] 2025-07-26 01:40:05,044 | INFO     | process IDs to be killed: [883312] (in reverse order)
[2025-07-26 03:40:37] 2025-07-26 01:40:05,313 | WARNING  | found no corresponding commands to process id(s)
[2025-07-26 03:40:37] 2025-07-26 01:40:05,314 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-26 03:40:37] 2025-07-26 01:40:05,339 | INFO     | did not find any defunct processes belonging to 883312
[2025-07-26 03:40:37] 2025-07-26 01:40:05,360 | INFO     | did not find any defunct processes belonging to 883312
[2025-07-26 03:40:37] 2025-07-26 01:40:05,360 | INFO     | ready for new job
[2025-07-26 03:40:37] 2025-07-26 01:40:05,360 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-26 03:40:37] 2025-07-26 01:40:05,363 | INFO     | ***************************************
[2025-07-26 03:40:37] 2025-07-26 01:40:05,363 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-26 03:40:37] 2025-07-26 01:40:05,363 | INFO     | ***************************************
[2025-07-26 03:40:37] 2025-07-26 01:40:05,363 | INFO     | 
[2025-07-26 03:40:37] 2025-07-26 01:40:05,372 | INFO     | architecture information:
[2025-07-26 03:40:37] 2025-07-26 01:40:05,372 | INFO     | executing command: cat /etc/os-release
[2025-07-26 03:40:37] 2025-07-26 01:40:05,399 | INFO     | cat /etc/os-release:
[2025-07-26 03:40:37] NAME="CentOS Linux"
[2025-07-26 03:40:37] VERSION="7 (Core)"
[2025-07-26 03:40:37] ID="centos"
[2025-07-26 03:40:37] ID_LIKE="rhel fedora"
[2025-07-26 03:40:37] VERSION_ID="7"
[2025-07-26 03:40:37] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-26 03:40:37] ANSI_COLOR="0;31"
[2025-07-26 03:40:37] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-26 03:40:37] HOME_URL="https://www.centos.org/"
[2025-07-26 03:40:37] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-26 03:40:37] 
[2025-07-26 03:40:37] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-26 03:40:37] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-26 03:40:37] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-26 03:40:37] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-26 03:40:37] 
[2025-07-26 03:40:37] 2025-07-26 01:40:05,399 | INFO     | ***************************************
[2025-07-26 03:40:37] 2025-07-26 01:40:05,902 | INFO     | executing command: df -mP /scratch/boinc/var/slot112/slots/0
[2025-07-26 03:40:37] 2025-07-26 01:40:05,928 | INFO     | sufficient remaining disk space (3265757446144 B)
[2025-07-26 03:40:37] 2025-07-26 01:40:05,928 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-26 03:40:37] 2025-07-26 01:40:05,928 | INFO     | current server update state: UPDATING_FINAL
[2025-07-26 03:40:37] 2025-07-26 01:40:05,928 | INFO     | update_server=False
[2025-07-26 03:40:37] 2025-07-26 01:40:05,929 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-26 03:40:37] 2025-07-26 01:40:06,075 | INFO     | all data control threads have been joined
[2025-07-26 03:40:37] 2025-07-26 01:40:06,431 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-26 03:40:37] 2025-07-26 01:40:06,519 | INFO     | all job control threads have been joined
[2025-07-26 03:40:37] 2025-07-26 01:40:06,527 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-26 03:40:37] 2025-07-26 01:40:06,795 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-26 03:40:37] 2025-07-26 01:40:06,795 | INFO     | aborting loop
[2025-07-26 03:40:37] 2025-07-26 01:40:06,934 | INFO     | [job] retrieve thread has finished
[2025-07-26 03:40:37] 2025-07-26 01:40:07,080 | INFO     | [data] control thread has finished
[2025-07-26 03:40:37] 2025-07-26 01:40:07,101 | INFO     | [job] validate thread has finished
[2025-07-26 03:40:37] 2025-07-26 01:40:07,416 | INFO     | [job] create_data_payload thread has finished
[2025-07-26 03:40:37] 2025-07-26 01:40:07,423 | INFO     | all payload control threads have been joined
[2025-07-26 03:40:37] 2025-07-26 01:40:07,524 | INFO     | [job] control thread has finished
[2025-07-26 03:40:37] 2025-07-26 01:40:07,558 | INFO     | [payload] execute_payloads thread has finished
[2025-07-26 03:40:37] 2025-07-26 01:40:07,659 | INFO     | [payload] failed_post thread has finished
[2025-07-26 03:40:37] 2025-07-26 01:40:07,717 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-26 03:40:37] 2025-07-26 01:40:07,754 | INFO     | [payload] validate_pre thread has finished
[2025-07-26 03:40:37] 2025-07-26 01:40:07,800 | INFO     | [job] job monitor thread has finished
[2025-07-26 03:40:37] 2025-07-26 01:40:08,375 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-26 03:40:37] 2025-07-26 01:40:08,396 | INFO     | [data] copytool_in thread has finished
[2025-07-26 03:40:37] 2025-07-26 01:40:08,428 | INFO     | [payload] control thread has finished
[2025-07-26 03:40:37] 2025-07-26 01:40:08,434 | INFO     | [data] copytool_out thread has finished
[2025-07-26 03:40:37] 2025-07-26 01:40:08,457 | INFO     | [payload] validate_post thread has finished
[2025-07-26 03:40:37] 2025-07-26 01:40:09,380 | INFO     | [job] queue monitor thread has finished
[2025-07-26 03:40:37] 2025-07-26 01:40:10,533 | INFO     | [data] queue_monitor thread has finished
[2025-07-26 03:40:37] 2025-07-26 01:40:10,833 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 23403436590912)>', '<ExcThread(monitor, started 23402991548160)>']
[2025-07-26 03:40:37] 2025-07-26 01:40:15,858 | INFO     | all workflow threads have been joined
[2025-07-26 03:40:37] 2025-07-26 01:40:15,858 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-26 03:40:37] 2025-07-26 01:40:15,858 | INFO     | traces error code: 0
[2025-07-26 03:40:37] 2025-07-26 01:40:15,859 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-26 03:40:37] 2025-07-26 01:40:36,767 | INFO     | PID=875967 has CPU usage=5.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-07-26 03:40:37] 2025-07-26 01:40:36,767 | INFO     | .. there are 23 such processes running
[2025-07-26 03:40:37] 2025-07-26 01:40:36,768 | INFO     | found 0 job(s) in 20 queues
[2025-07-26 03:40:37] 2025-07-26 01:40:36,768 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-26 03:40:37] 2025-07-26 01:40:36,768 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-26 03:40:37] 2025-07-26 01:40:36,768 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-26 03:40:37] 2025-07-26 01:40:36,768 | INFO     | [monitor] control thread has ended
[2025-07-26 03:40:37] 2025-07-26 01:40:36,911 [wrapper] ==== pilot stdout END ====
[2025-07-26 03:40:37] 2025-07-26 01:40:36,915 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-26 03:40:37] 2025-07-26 01:40:36,919 [wrapper] pilotpid: 875967
[2025-07-26 03:40:37] 2025-07-26 01:40:36,923 [wrapper] Pilot exit status: 0
[2025-07-26 03:40:37] 2025-07-26 01:40:36,939 [wrapper] pandaids: 6743008412 6743008412
[2025-07-26 03:40:37] 2025-07-26 01:40:37,092 [wrapper] cleanup supervisor_pilot 1952345 875968
[2025-07-26 03:40:37] 2025-07-26 01:40:37,097 [wrapper] Test setup, not cleaning
[2025-07-26 03:40:37] 2025-07-26 01:40:37,105 [wrapper] apfmon messages muted
[2025-07-26 03:40:37] 2025-07-26 01:40:37,109 [wrapper] ==== wrapper stdout END ====
[2025-07-26 03:40:37] 2025-07-26 01:40:37,113 [wrapper] ==== wrapper stderr END ====
[2025-07-26 03:40:37]  *** Error codes and diagnostics ***
[2025-07-26 03:40:37]     "exeErrorCode": 0,
[2025-07-26 03:40:37]     "exeErrorDiag": "",
[2025-07-26 03:40:37]     "pilotErrorCode": 0,
[2025-07-26 03:40:37]     "pilotErrorDiag": "",
[2025-07-26 03:40:37]  *** Listing of results directory ***
[2025-07-26 03:40:37] total 976072
[2025-07-26 03:40:37] drwx------ 4 boinc boinc      4096 Jun 17 12:04 pilot3
[2025-07-26 03:40:37] -rw-r--r-- 1 boinc boinc    530466 Jul 23 05:19 pilot3.tar.gz
[2025-07-26 03:40:37] -rw-r--r-- 1 boinc boinc      5112 Jul 23 05:41 queuedata.json
[2025-07-26 03:40:37] -rwx------ 1 boinc boinc     36292 Jul 23 05:41 runpilot2-wrapper.sh
[2025-07-26 03:40:37] -rw-r--r-- 1 boinc boinc       100 Jul 25 21:15 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-26 03:40:37] -rwxr-xr-x 1 boinc boinc      7986 Jul 25 21:15 run_atlas
[2025-07-26 03:40:37] -rw-r--r-- 1 boinc boinc       105 Jul 25 21:15 job.xml
[2025-07-26 03:40:37] -rw-r--r-- 3 boinc boinc 345458498 Jul 25 21:15 EVNT.45697539._000180.pool.root.1
[2025-07-26 03:40:37] -rw-r--r-- 3 boinc boinc 345458498 Jul 25 21:15 ATLAS.root_0
[2025-07-26 03:40:37] -rw-r--r-- 2 boinc boinc     15095 Jul 25 21:15 start_atlas.sh
[2025-07-26 03:40:37] drwxrwx--x 2 boinc boinc      4096 Jul 25 21:15 shared
[2025-07-26 03:40:37] -rw-r--r-- 2 boinc boinc    542898 Jul 25 21:15 input.tar.gz
[2025-07-26 03:40:37] -rw-r--r-- 1 boinc boinc         0 Jul 25 21:15 boinc_lockfile
[2025-07-26 03:40:37] -rw-r--r-- 1 boinc boinc      2594 Jul 25 23:25 pandaJob.out
[2025-07-26 03:40:37] -rw------- 1 boinc boinc    980001 Jul 25 23:26 agis_schedconf.cvmfs.json
[2025-07-26 03:40:37] -rw-r--r-- 1 boinc boinc      6697 Jul 26 03:17 init_data.xml
[2025-07-26 03:40:37] -rw------- 1 boinc boinc 301187545 Jul 26 03:39 HITS.45697541._005349.pool.root.1
[2025-07-26 03:40:37] -rw-r--r-- 1 boinc boinc       532 Jul 26 03:39 boinc_task_state.xml
[2025-07-26 03:40:37] -rw------- 1 boinc boinc      1031 Jul 26 03:39 memory_monitor_summary.json
[2025-07-26 03:40:37] -rw------- 1 boinc boinc        96 Jul 26 03:39 pilot_heartbeat.json
[2025-07-26 03:40:37] -rw------- 1 boinc boinc   1593052 Jul 26 03:39 agis_ddmendpoints.agis.ALL.json
[2025-07-26 03:40:37] -rw------- 1 boinc boinc    354296 Jul 26 03:39 log.45697541._005349.job.log.tgz.1
[2025-07-26 03:40:37] -rw------- 1 boinc boinc      7786 Jul 26 03:40 heartbeat.json
[2025-07-26 03:40:37] -rw-r--r-- 1 boinc boinc      8192 Jul 26 03:40 boinc_mmap_file
[2025-07-26 03:40:37] -rw-r--r-- 1 boinc boinc        28 Jul 26 03:40 wrapper_checkpoint.txt
[2025-07-26 03:40:37] -rw------- 1 boinc boinc       822 Jul 26 03:40 pilotlog.txt
[2025-07-26 03:40:37] -rw------- 1 boinc boinc   1397423 Jul 26 03:40 log.45697541._005349.job.log.1
[2025-07-26 03:40:37] -rw------- 1 boinc boinc       357 Jul 26 03:40 output.list
[2025-07-26 03:40:37] -rw-r--r-- 1 boinc boinc       620 Jul 26 03:40 runtime_log
[2025-07-26 03:40:37] -rw------- 1 boinc boinc   1771520 Jul 26 03:40 result.tar.gz
[2025-07-26 03:40:37] -rw-r--r-- 1 boinc boinc      9119 Jul 26 03:40 runtime_log.err
[2025-07-26 03:40:37] -rw------- 1 boinc boinc       791 Jul 26 03:40 KtzMDmNXfy7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmopKLDmrysBVo.diag
[2025-07-26 03:40:37] -rw-r--r-- 1 boinc boinc     22576 Jul 26 03:40 stderr.txt
[2025-07-26 03:40:37] HITS file was successfully produced:
[2025-07-26 03:40:37] -rw------- 1 boinc boinc 301187545 Jul 26 03:39 shared/HITS.pool.root.1
[2025-07-26 03:40:37]  *** Contents of shared directory: ***
[2025-07-26 03:40:37] total 633784
[2025-07-26 03:40:37] -rw-r--r-- 3 boinc boinc 345458498 Jul 25 21:15 ATLAS.root_0
[2025-07-26 03:40:37] -rw-r--r-- 2 boinc boinc     15095 Jul 25 21:15 start_atlas.sh
[2025-07-26 03:40:37] -rw-r--r-- 2 boinc boinc    542898 Jul 25 21:15 input.tar.gz
[2025-07-26 03:40:37] -rw------- 1 boinc boinc 301187545 Jul 26 03:39 HITS.pool.root.1
[2025-07-26 03:40:37] -rw------- 1 boinc boinc   1771520 Jul 26 03:40 result.tar.gz
03:40:38 (871633): run_atlas exited; CPU time 59702.589262
03:40:38 (871633): called boinc_finish(0)

</stderr_txt>
]]>

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