Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
21:30:55 (18615): wrapper (7.7.26015): starting
21:30:55 (18615): wrapper: running run_atlas (--nthreads 8)
[2025-07-23 21:30:55] Arguments: --nthreads 8
[2025-07-23 21:30:55] Threads: 8
[2025-07-23 21:30:55] Checking for CVMFS
[2025-07-23 21:30:56] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-23 21:30:57] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-23 21:30:57] Running cvmfs_config stat atlas.cern.ch
[2025-07-23 21:30:58] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-23 21:30:58] 2.11.2.0 13001 104303 136652 148669 2 78 22758242 25165824 2422 130560 0 75320162 99.861 49880052 3955 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-07-23 21:30:58] CVMFS is ok
[2025-07-23 21:30:58] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-23 21:30:58] Checking for apptainer binary...
[2025-07-23 21:30:58] Using apptainer found in PATH at /usr/bin/apptainer
[2025-07-23 21:30:58] Running /usr/bin/apptainer --version
[2025-07-23 21:30:58] apptainer version 1.3.2-1.el7
[2025-07-23 21:30:58] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-23 21:31:01] cg-vwn444.simple-grid.lan
[2025-07-23 21:31:01] apptainer works
[2025-07-23 21:31:01] Set ATHENA_PROC_NUMBER=8
[2025-07-23 21:31:01] Set ATHENA_CORE_NUMBER=8
[2025-07-23 21:31:01] Starting ATLAS job with PandaID=6743009347
[2025-07-23 21:31:01] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/4 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-24 05:44:20]  *** The last 200 lines of the pilot log: ***
[2025-07-24 05:44:20] 2025-07-24 02:06:44,310 | INFO     | fitting pss+swap vs Time
[2025-07-24 05:44:20] 2025-07-24 02:06:44,311 | INFO     | sum of square deviations: 17695289920.0
[2025-07-24 05:44:20] 2025-07-24 02:06:44,316 | INFO     | sum of deviations: -9850308547.999994
[2025-07-24 05:44:20] 2025-07-24 02:06:44,317 | INFO     | mean x: 1753310960.0
[2025-07-24 05:44:20] 2025-07-24 02:06:44,317 | INFO     | mean y: 2564826.4493506495
[2025-07-24 05:44:20] 2025-07-24 02:06:44,317 | INFO     | -- intersect: 978567707.1407834
[2025-07-24 05:44:20] 2025-07-24 02:06:44,317 | INFO     | intersect: 978567707.1407834
[2025-07-24 05:44:20] 2025-07-24 02:06:44,318 | INFO     | chi2: 2.565470900112655
[2025-07-24 05:44:20] 2025-07-24 02:06:44,318 | INFO     | sum of square deviations: 17014774835.0
[2025-07-24 05:44:20] 2025-07-24 02:06:44,334 | INFO     | sum of deviations: 16220507437.999994
[2025-07-24 05:44:20] 2025-07-24 02:06:44,334 | INFO     | mean x: 1753310807.5
[2025-07-24 05:44:20] 2025-07-24 02:06:44,335 | INFO     | mean y: 2570606.8947368423
[2025-07-24 05:44:20] 2025-07-24 02:06:44,335 | INFO     | -- intersect: -1668893827.3967047
[2025-07-24 05:44:20] 2025-07-24 02:06:44,335 | INFO     | intersect: -1668893827.3967047
[2025-07-24 05:44:20] 2025-07-24 02:06:44,335 | INFO     | chi2: 1.7976529706835365
[2025-07-24 05:44:20] 2025-07-24 02:06:44,335 | INFO     | current chi2=1.7976529706835365 (change=29.9289276442544 %)
[2025-07-24 05:44:20] 2025-07-24 02:06:44,336 | INFO     | sum of square deviations: 16351934500.0
[2025-07-24 05:44:20] 2025-07-24 02:06:44,341 | INFO     | sum of deviations: 15641884983.999992
[2025-07-24 05:44:20] 2025-07-24 02:06:44,342 | INFO     | mean x: 1753310655.0
[2025-07-24 05:44:20] 2025-07-24 02:06:44,342 | INFO     | mean y: 2570473.7653333335
[2025-07-24 05:44:20] 2025-07-24 02:06:44,342 | INFO     | -- intersect: -1674606230.1122224
[2025-07-24 05:44:20] 2025-07-24 02:06:44,342 | INFO     | intersect: -1674606230.1122224
[2025-07-24 05:44:20] 2025-07-24 02:06:44,343 | INFO     | chi2: 1.7976859873710793
[2025-07-24 05:44:20] 2025-07-24 02:06:44,343 | INFO     | current chi2=1.7976859873710793 (change=-0.0018366552433253345 %)
[2025-07-24 05:44:20] 2025-07-24 02:06:44,343 | INFO     | right removable region: 374
[2025-07-24 05:44:20] 2025-07-24 02:06:44,344 | INFO     | sum of square deviations: 17014774835.0
[2025-07-24 05:44:20] 2025-07-24 02:06:44,369 | INFO     | sum of deviations: -77804167119.5
[2025-07-24 05:44:20] 2025-07-24 02:06:44,369 | INFO     | mean x: 1753311112.5
[2025-07-24 05:44:20] 2025-07-24 02:06:44,369 | INFO     | mean y: 2579980.8236842104
[2025-07-24 05:44:20] 2025-07-24 02:06:44,370 | INFO     | -- intersect: 8020018479.558097
[2025-07-24 05:44:20] 2025-07-24 02:06:44,370 | INFO     | intersect: 8020018479.558097
[2025-07-24 05:44:20] 2025-07-24 02:06:44,370 | INFO     | chi2: 1.0089503111858862
[2025-07-24 05:44:20] 2025-07-24 02:06:44,370 | INFO     | current chi2=1.0089503111858862 (change=60.671925331853075 %)
[2025-07-24 05:44:20] 2025-07-24 02:06:44,378 | INFO     | sum of square deviations: 16351934500.0
[2025-07-24 05:44:20] 2025-07-24 02:06:44,383 | INFO     | sum of deviations: -79622705493.99998
[2025-07-24 05:44:20] 2025-07-24 02:06:44,384 | INFO     | mean x: 1753311265.0
[2025-07-24 05:44:20] 2025-07-24 02:06:44,384 | INFO     | mean y: 2580385.912
[2025-07-24 05:44:20] 2025-07-24 02:06:44,384 | INFO     | -- intersect: 8540003679.309339
[2025-07-24 05:44:20] 2025-07-24 02:06:44,384 | INFO     | intersect: 8540003679.309339
[2025-07-24 05:44:20] 2025-07-24 02:06:44,384 | INFO     | chi2: 0.9877633064736577
[2025-07-24 05:44:20] 2025-07-24 02:06:44,385 | INFO     | current chi2=0.9877633064736577 (change=2.0999056620861696 %)
[2025-07-24 05:44:20] 2025-07-24 02:06:44,385 | INFO     | left removable region: 20
[2025-07-24 05:44:20] 2025-07-24 02:06:44,385 | INFO     | sum of square deviations: 13755764892.5
[2025-07-24 05:44:20] 2025-07-24 02:06:44,389 | INFO     | sum of deviations: -30658543880.000008
[2025-07-24 05:44:20] 2025-07-24 02:06:44,389 | INFO     | mean x: 1753311234.5
[2025-07-24 05:44:20] 2025-07-24 02:06:44,389 | INFO     | mean y: 2580957.1694915253
[2025-07-24 05:44:20] 2025-07-24 02:06:44,389 | INFO     | -- intersect: 3910322172.45613
[2025-07-24 05:44:20] 2025-07-24 02:06:44,390 | INFO     | intersect: 3910322172.45613
[2025-07-24 05:44:20] 2025-07-24 02:06:44,390 | INFO     | chi2: 0.16387165417426344
[2025-07-24 05:44:20] 2025-07-24 02:06:44,390 | INFO     | -- intersect: 3910322172.45613
[2025-07-24 05:44:20] 2025-07-24 02:06:44,390 | INFO     | current memory leak: -2.23 B/s (using 354 data points, chi2=0.16)
[2025-07-24 05:44:20] 2025-07-24 02:06:44,391 | INFO     | could have reported an average CPU frequency of 1999 MHz (16 samples)
[2025-07-24 05:44:20] 2025-07-24 02:06:44,391 | INFO     | ..............................
[2025-07-24 05:44:20] 2025-07-24 02:06:44,392 | INFO     | . Timing measurements:
[2025-07-24 05:44:20] 2025-07-24 02:06:44,392 | INFO     | . get job = 0 s
[2025-07-24 05:44:20] 2025-07-24 02:06:44,392 | INFO     | . initial setup = 2 s
[2025-07-24 05:44:20] 2025-07-24 02:06:44,392 | INFO     | . payload setup = 11 s
[2025-07-24 05:44:20] 2025-07-24 02:06:44,392 | INFO     | . stage-in = 0 s
[2025-07-24 05:44:20] 2025-07-24 02:06:44,392 | INFO     | . payload execution = 23484 s
[2025-07-24 05:44:20] 2025-07-24 02:06:44,392 | INFO     | . stage-out = 3 s
[2025-07-24 05:44:20] 2025-07-24 02:06:44,392 | INFO     | . log creation = 1 s
[2025-07-24 05:44:20] 2025-07-24 02:06:44,392 | INFO     | ..............................
[2025-07-24 05:44:20] 2025-07-24 02:06:44,552 | INFO     | 
[2025-07-24 05:44:20] 2025-07-24 02:06:44,552 | INFO     | job summary report
[2025-07-24 05:44:20] 2025-07-24 02:06:44,552 | INFO     | --------------------------------------------------
[2025-07-24 05:44:20] 2025-07-24 02:06:44,552 | INFO     | PanDA job id: 6743009347
[2025-07-24 05:44:20] 2025-07-24 02:06:44,552 | INFO     | task id: 45697541
[2025-07-24 05:44:20] 2025-07-24 02:06:44,552 | INFO     | errors: (none)
[2025-07-24 05:44:20] 2025-07-24 02:06:44,553 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-24 05:44:20] 2025-07-24 02:06:44,553 | INFO     | pilot state: finished 
[2025-07-24 05:44:20] 2025-07-24 02:06:44,553 | INFO     | transexitcode: 0
[2025-07-24 05:44:20] 2025-07-24 02:06:44,553 | INFO     | exeerrorcode: 0
[2025-07-24 05:44:20] 2025-07-24 02:06:44,553 | INFO     | exeerrordiag: 
[2025-07-24 05:44:20] 2025-07-24 02:06:44,553 | INFO     | exitcode: 0
[2025-07-24 05:44:20] 2025-07-24 02:06:44,553 | INFO     | exitmsg: OK
[2025-07-24 05:44:20] 2025-07-24 02:06:44,553 | INFO     | cpuconsumptiontime: 90429 s
[2025-07-24 05:44:20] 2025-07-24 02:06:44,553 | INFO     | nevents: 400
[2025-07-24 05:44:20] 2025-07-24 02:06:44,553 | INFO     | neventsw: 0
[2025-07-24 05:44:20] 2025-07-24 02:06:44,554 | INFO     | pid: 29240
[2025-07-24 05:44:20] 2025-07-24 02:06:44,554 | INFO     | pgrp: 29240
[2025-07-24 05:44:20] 2025-07-24 02:06:44,554 | INFO     | corecount: 8
[2025-07-24 05:44:20] 2025-07-24 02:06:44,554 | INFO     | event service: False
[2025-07-24 05:44:20] 2025-07-24 02:06:44,554 | INFO     | sizes: {0: 2397507, 9: 2397769, 11: 2397797, 23499: 2431777, 23505: 2440775, 23506: 2440831, 23587: 2441153}
[2025-07-24 05:44:20] 2025-07-24 02:06:44,554 | INFO     | --------------------------------------------------
[2025-07-24 05:44:20] 2025-07-24 02:06:44,554 | INFO     | 
[2025-07-24 05:44:20] 2025-07-24 02:06:44,554 | INFO     | executing command: ls -lF /var/lib/boinc/slots/4
[2025-07-24 05:44:20] 2025-07-24 02:06:44,829 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-24 05:44:20] 2025-07-24 02:06:44,830 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-24 05:44:20] 2025-07-24 02:06:44,830 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-24 05:44:20] 2025-07-24 02:06:44,830 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-24 05:44:20] 2025-07-24 02:06:44,830 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-24 05:44:20] 2025-07-24 02:06:44,830 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-24 05:44:20] 2025-07-24 02:06:44,830 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-24 05:44:20] 2025-07-24 02:06:44,830 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-24 05:44:20] 2025-07-24 02:06:44,830 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-24 05:44:20] 2025-07-24 02:06:44,831 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-24 05:44:20] 2025-07-24 02:06:44,831 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-24 05:44:20] 2025-07-24 02:06:44,831 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-24 05:44:20] 2025-07-24 02:06:44,831 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-24 05:44:20] 2025-07-24 02:06:44,831 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-24 05:44:20] 2025-07-24 02:06:44,831 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-24 05:44:20] 2025-07-24 02:06:44,831 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-24 05:44:20] 2025-07-24 02:06:44,831 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-24 05:44:20] 2025-07-24 02:06:44,831 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-24 05:44:20] 2025-07-24 02:06:44,832 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-24 05:44:20] 2025-07-24 02:06:44,832 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-24 05:44:20] 2025-07-24 02:06:44,832 | INFO     | job 6743009347 has completed (purged errors)
[2025-07-24 05:44:20] 2025-07-24 02:06:44,832 | INFO     | overall cleanup function is called
[2025-07-24 05:44:20] 2025-07-24 02:06:45,842 | INFO     | --- collectZombieJob: --- 10, [29240]
[2025-07-24 05:44:20] 2025-07-24 02:06:45,842 | INFO     | zombie collector waiting for pid 29240
[2025-07-24 05:44:20] 2025-07-24 02:06:45,842 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-24 05:44:20] 2025-07-24 02:06:45,842 | INFO     | collected zombie processes
[2025-07-24 05:44:20] 2025-07-24 02:06:45,842 | INFO     | will attempt to kill all subprocesses of pid=29240
[2025-07-24 05:44:20] 2025-07-24 02:06:45,970 | INFO     | process IDs to be killed: [29240] (in reverse order)
[2025-07-24 05:44:20] 2025-07-24 02:06:46,740 | WARNING  | found no corresponding commands to process id(s)
[2025-07-24 05:44:20] 2025-07-24 02:06:46,741 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-24 05:44:20] 2025-07-24 02:06:46,744 | INFO     | did not find any defunct processes belonging to 29240
[2025-07-24 05:44:20] 2025-07-24 02:06:46,747 | INFO     | did not find any defunct processes belonging to 29240
[2025-07-24 05:44:20] 2025-07-24 02:06:46,747 | INFO     | ready for new job
[2025-07-24 05:44:20] 2025-07-24 02:06:46,747 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-24 05:44:20] 2025-07-24 02:06:46,750 | INFO     | ***************************************
[2025-07-24 05:44:20] 2025-07-24 02:06:46,750 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-24 05:44:20] 2025-07-24 02:06:46,750 | INFO     | ***************************************
[2025-07-24 05:44:20] 2025-07-24 02:06:46,750 | INFO     | 
[2025-07-24 05:44:20] 2025-07-24 02:06:46,751 | INFO     | pilot is running in a VM
[2025-07-24 05:44:20] 2025-07-24 02:06:46,751 | INFO     | architecture information:
[2025-07-24 05:44:20] 2025-07-24 02:06:46,751 | INFO     | executing command: cat /etc/os-release
[2025-07-24 05:44:20] 2025-07-24 02:06:46,903 | INFO     | cat /etc/os-release:
[2025-07-24 05:44:20] NAME="CentOS Linux"
[2025-07-24 05:44:20] VERSION="7 (Core)"
[2025-07-24 05:44:20] ID="centos"
[2025-07-24 05:44:20] ID_LIKE="rhel fedora"
[2025-07-24 05:44:20] VERSION_ID="7"
[2025-07-24 05:44:20] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-24 05:44:20] ANSI_COLOR="0;31"
[2025-07-24 05:44:20] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-24 05:44:20] HOME_URL="https://www.centos.org/"
[2025-07-24 05:44:20] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-24 05:44:20] 
[2025-07-24 05:44:20] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-24 05:44:20] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-24 05:44:20] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-24 05:44:20] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-24 05:44:20] 
[2025-07-24 05:44:20] 2025-07-24 02:06:46,904 | INFO     | ***************************************
[2025-07-24 05:44:20] 2025-07-24 02:06:47,408 | INFO     | executing command: df -mP /var/lib/boinc/slots/4
[2025-07-24 05:44:20] 2025-07-24 02:06:47,611 | INFO     | sufficient remaining disk space (496661168128 B)
[2025-07-24 05:44:20] 2025-07-24 02:06:47,612 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-24 05:44:20] 2025-07-24 02:06:47,612 | INFO     | current server update state: UPDATING_FINAL
[2025-07-24 05:44:20] 2025-07-24 02:06:47,612 | INFO     | update_server=False
[2025-07-24 05:44:20] 2025-07-24 02:06:47,612 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-24 05:44:20] 2025-07-24 02:06:47,735 | INFO     | all job control threads have been joined
[2025-07-24 05:44:20] 2025-07-24 02:06:47,936 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-07-24 05:44:20] 2025-07-24 02:06:47,936 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-07-24 05:44:20] 2025-07-24 02:06:47,936 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-24 05:44:20] 2025-07-24 02:06:47,936 | INFO     | will abort loop
[2025-07-24 05:44:20] 2025-07-24 02:06:48,282 | INFO     | all data control threads have been joined
[2025-07-24 05:44:20] 2025-07-24 02:06:48,339 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-24 05:44:20] 2025-07-24 02:06:48,617 | INFO     | all payload control threads have been joined
[2025-07-24 05:44:20] 2025-07-24 02:06:48,618 | INFO     | [job] retrieve thread has finished
[2025-07-24 05:44:20] 2025-07-24 02:06:48,742 | INFO     | [job] control thread has finished
[2025-07-24 05:44:20] 2025-07-24 02:06:48,881 | INFO     | [payload] validate_pre thread has finished
[2025-07-24 05:44:20] 2025-07-24 02:06:48,884 | INFO     | [job] create_data_payload thread has finished
[2025-07-24 05:44:20] 2025-07-24 02:06:48,942 | INFO     | [job] job monitor thread has finished
[2025-07-24 05:44:20] 2025-07-24 02:06:49,287 | INFO     | [data] control thread has finished
[2025-07-24 05:44:20] 2025-07-24 02:06:49,545 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-24 05:44:20] 2025-07-24 02:06:49,567 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-24 05:44:20] 2025-07-24 02:06:49,579 | INFO     | [data] copytool_in thread has finished
[2025-07-24 05:44:20] 2025-07-24 02:06:49,623 | INFO     | [payload] control thread has finished
[2025-07-24 05:44:20] 2025-07-24 02:06:49,779 | INFO     | [payload] execute_payloads thread has finished
[2025-07-24 05:44:20] 2025-07-24 02:06:49,929 | INFO     | [job] validate thread has finished
[2025-07-24 05:44:20] 2025-07-24 02:06:49,930 | INFO     | [payload] validate_post thread has finished
[2025-07-24 05:44:20] 2025-07-24 02:06:49,985 | INFO     | [payload] failed_post thread has finished
[2025-07-24 05:44:20] 2025-07-24 02:06:50,346 | INFO     | [data] copytool_out thread has finished
[2025-07-24 05:44:20] 2025-07-24 02:06:50,573 | INFO     | [job] queue monitor thread has finished
[2025-07-24 05:44:20] 2025-07-24 02:06:50,805 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-24 05:44:20] 2025-07-24 02:06:54,814 | INFO     | [data] queue_monitor thread has finished
[2025-07-24 05:44:20] 2025-07-24 02:06:56,736 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140131046512448)>', '<ExcThread(monitor, started 140130597717760)>']
[2025-07-24 05:44:20] 2025-07-24 02:07:01,762 | INFO     | all workflow threads have been joined
[2025-07-24 05:44:20] 2025-07-24 02:07:01,762 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-24 05:44:20] 2025-07-24 02:07:01,762 | INFO     | traces error code: 0
[2025-07-24 05:44:20] 2025-07-24 02:07:01,762 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-24 05:44:20] 2025-07-24 02:07:17,011 | INFO     | PID=22632 has CPU usage=1.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-07-24 05:44:20] 2025-07-24 02:07:17,012 | INFO     | .. there are 9 such processes running
[2025-07-24 05:44:20] 2025-07-24 02:07:17,013 | INFO     | found 0 job(s) in 20 queues
[2025-07-24 05:44:20] 2025-07-24 02:07:17,013 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-24 05:44:20] 2025-07-24 02:07:17,013 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-24 05:44:20] 2025-07-24 02:07:17,013 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-24 05:44:20] 2025-07-24 02:07:17,013 | CRITICAL | thread 'MainThread' is not alive
[2025-07-24 05:44:20] 2025-07-24 02:07:17,013 | INFO     | [monitor] control thread has ended
[2025-07-24 05:44:20] 2025-07-24 02:07:17,303 [wrapper] ==== pilot stdout END ====
[2025-07-24 05:44:20] 2025-07-24 02:07:17,344 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-24 05:44:20] 2025-07-24 02:07:17,396 [wrapper] pilotpid: 22632
[2025-07-24 05:44:20] 2025-07-24 02:07:17,420 [wrapper] Pilot exit status: 0
[2025-07-24 05:44:20] 2025-07-24 02:07:17,814 [wrapper] pandaids: 6743009347
[2025-07-24 05:44:20] 2025-07-24 02:07:18,820 [wrapper] cleanup supervisor_pilot 25300 22633
[2025-07-24 05:44:20] 2025-07-24 02:07:18,930 [wrapper] Test setup, not cleaning
[2025-07-24 05:44:20] 2025-07-24 02:07:19,048 [wrapper] apfmon messages muted
[2025-07-24 05:44:20] 2025-07-24 02:07:19,152 [wrapper] ==== wrapper stdout END ====
[2025-07-24 05:44:20] 2025-07-24 02:07:19,236 [wrapper] ==== wrapper stderr END ====
[2025-07-24 05:44:20]  *** Error codes and diagnostics ***
[2025-07-24 05:44:20]     "exeErrorCode": 0,
[2025-07-24 05:44:20]     "exeErrorDiag": "",
[2025-07-24 05:44:20]     "pilotErrorCode": 0,
[2025-07-24 05:44:20]     "pilotErrorDiag": "",
[2025-07-24 05:44:20]  *** Listing of results directory ***
[2025-07-24 05:44:20] total 646344
[2025-07-24 05:44:20] -rw-r--r--. 1 boinc boinc    530466 Jul 23 05:19 pilot3.tar.gz
[2025-07-24 05:44:20] -rw-r--r--. 1 boinc boinc      5112 Jul 23 05:52 queuedata.json
[2025-07-24 05:44:20] -rwx------. 1 boinc boinc     36292 Jul 23 05:53 runpilot2-wrapper.sh
[2025-07-24 05:44:20] -rw-r--r--. 1 boinc boinc       100 Jul 23 21:30 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-24 05:44:20] -rwxr-xr-x. 1 boinc boinc      7986 Jul 23 21:30 run_atlas
[2025-07-24 05:44:20] -rw-r--r--. 1 boinc boinc       105 Jul 23 21:30 job.xml
[2025-07-24 05:44:20] -rw-r--r--. 1 boinc boinc      6391 Jul 23 21:30 init_data.xml
[2025-07-24 05:44:20] -rw-r--r--. 2 boinc boinc 346939214 Jul 23 21:30 EVNT.45697539._000183.pool.root.1
[2025-07-24 05:44:20] -rw-r--r--. 2 boinc boinc     15095 Jul 23 21:30 start_atlas.sh
[2025-07-24 05:44:20] drwxrwx--x. 2 boinc boinc        68 Jul 23 21:30 shared
[2025-07-24 05:44:20] -rw-r--r--. 2 boinc boinc    542896 Jul 23 21:30 input.tar.gz
[2025-07-24 05:44:20] -rw-r--r--. 1 boinc boinc         0 Jul 23 21:30 boinc_lockfile
[2025-07-24 05:44:20] -rw-r--r--. 1 boinc boinc      2593 Jul 23 21:31 pandaJob.out
[2025-07-24 05:44:20] -rw-------. 1 boinc boinc    979640 Jul 23 21:33 agis_schedconf.cvmfs.json
[2025-07-24 05:44:20] drwx------. 4 boinc boinc      4096 Jul 23 21:33 pilot3
[2025-07-24 05:44:20] -rw-------. 1 boinc boinc 306108437 Jul 24 04:03 HITS.45697541._005418.pool.root.1
[2025-07-24 05:44:20] -rw-r--r--. 1 boinc boinc       532 Jul 24 04:04 boinc_task_state.xml
[2025-07-24 05:44:20] -rw-------. 1 boinc boinc      1020 Jul 24 04:05 memory_monitor_summary.json
[2025-07-24 05:44:20] -rw-------. 1 boinc boinc   1593041 Jul 24 04:05 agis_ddmendpoints.agis.ALL.json
[2025-07-24 05:44:20] -rw-------. 1 boinc boinc    471696 Jul 24 04:05 log.45697541._005418.job.log.tgz.1
[2025-07-24 05:44:20] -rw-------. 1 boinc boinc      7776 Jul 24 04:06 heartbeat.json
[2025-07-24 05:44:20] -rw-------. 1 boinc boinc        95 Jul 24 04:07 pilot_heartbeat.json
[2025-07-24 05:44:20] -rw-------. 1 boinc boinc       890 Jul 24 04:07 pilotlog.txt
[2025-07-24 05:44:20] -rw-------. 1 boinc boinc   2000968 Jul 24 04:07 log.45697541._005418.job.log.1
[2025-07-24 05:44:20] -rw-------. 1 boinc boinc       357 Jul 24 04:07 output.list
[2025-07-24 05:44:20] -rw-r--r--. 1 boinc boinc       620 Jul 24 04:07 runtime_log
[2025-07-24 05:44:20] -rw-------. 1 boinc boinc   2488320 Jul 24 04:07 result.tar.gz
[2025-07-24 05:44:20] -rw-------. 1 boinc boinc       658 Jul 24 04:07 s1wLDmGjfy7n9Rq4apOajLDm4fhM0noT9bVof3QYDmUlvKDmvDSwGo.diag
[2025-07-24 05:44:20] -rw-r--r--. 1 boinc boinc      8660 Jul 24 04:07 runtime_log.err
[2025-07-24 05:44:20] -rw-r--r--. 1 boinc boinc      8192 Jul 24 05:44 boinc_mmap_file
[2025-07-24 05:44:20] -rw-r--r--. 1 boinc boinc        28 Jul 24 05:44 wrapper_checkpoint.txt
[2025-07-24 05:44:20] -rw-r--r--. 1 boinc boinc     20590 Jul 24 05:44 stderr.txt
[2025-07-24 05:44:20] HITS file was successfully produced:
[2025-07-24 05:44:20] -rw-------. 1 boinc boinc 306108437 Jul 24 04:03 shared/HITS.pool.root.1
[2025-07-24 05:44:20]  *** Contents of shared directory: ***
[2025-07-24 05:44:20] total 640724
[2025-07-24 05:44:20] -rw-r--r--. 2 boinc boinc 346939214 Jul 23 21:30 ATLAS.root_0
[2025-07-24 05:44:20] -rw-r--r--. 2 boinc boinc     15095 Jul 23 21:30 start_atlas.sh
[2025-07-24 05:44:20] -rw-r--r--. 2 boinc boinc    542896 Jul 23 21:30 input.tar.gz
[2025-07-24 05:44:20] -rw-------. 1 boinc boinc 306108437 Jul 24 04:03 HITS.pool.root.1
[2025-07-24 05:44:20] -rw-------. 1 boinc boinc   2488320 Jul 24 04:07 result.tar.gz
05:44:22 (18615): run_atlas exited; CPU time 90751.962008
05:44:22 (18615): called boinc_finish(0)

</stderr_txt>
]]>

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