Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
08:18:55 (328695): wrapper (7.7.26015): starting
08:18:55 (328695): wrapper: running run_atlas (--nthreads 8)
[2025-07-23 08:18:55] Arguments: --nthreads 8
[2025-07-23 08:18:55] Threads: 8
[2025-07-23 08:18:55] Checking for CVMFS
[2025-07-23 08:18:55] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-23 08:18:55] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-23 08:18:55] Running cvmfs_config stat atlas.cern.ch
[2025-07-23 08:18:56] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-23 08:18:56] 2.13.0.0 79137 18253 135340 148658 1 103 39212468 40960000 31460 16776704 0 148222601 99.614 178737394 30840 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-07-23 08:18:56] CVMFS is ok
[2025-07-23 08:18:56] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-07-23 08:18:56] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-07-23 08:18:56] Further information can be found at the LHC@home message board.
[2025-07-23 08:18:56] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-23 08:18:56] Checking for apptainer binary...
[2025-07-23 08:18:56] Using apptainer found in PATH at /usr/bin/apptainer
[2025-07-23 08:18:56] Running /usr/bin/apptainer --version
[2025-07-23 08:18:56] apptainer version 1.4.1-1.el9
[2025-07-23 08:18:56] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-23 08:18:57] c8-7-6.aglt2.org
[2025-07-23 08:18:57] apptainer works
[2025-07-23 08:18:57] Set ATHENA_PROC_NUMBER=8
[2025-07-23 08:18:57] Set ATHENA_CORE_NUMBER=8
[2025-07-23 08:18:57] Starting ATLAS job with PandaID=6743008201
[2025-07-23 08:18:57] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-23 09:48:26]  *** The last 200 lines of the pilot log: ***
[2025-07-23 09:48:26]  is_tar=False
[2025-07-23 09:48:26]  lfn=log.45697541._005138.job.log.tgz.1
[2025-07-23 09:48:26]  mtime=0
[2025-07-23 09:48:26]  protocol_id=None
[2025-07-23 09:48:26]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-07-23 09:48:26]  replicas=None
[2025-07-23 09:48:26]  scope=mc23_13p6TeV
[2025-07-23 09:48:26]  status=None
[2025-07-23 09:48:26]  status_code=0
[2025-07-23 09:48:26]  storage_token=
[2025-07-23 09:48:26]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6743008201/log.45697541._005138.job.log.tgz.1
[2025-07-23 09:48:26]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/fd/7e/log.45697541._005138.job.log.tgz.1
[2025-07-23 09:48:26]  workdir=None
[2025-07-23 09:48:26] ]
[2025-07-23 09:48:26] 2025-07-23 13:47:46,719 | INFO     | transferring file log.45697541._005138.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6743008201/log.45697541._005138.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-07-23 09:48:26] 2025-07-23 13:47:46,719 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6743008201/log.45697541._005138.job.log.tgz.1 /tmp/boinchome/slots/0/log.45697541._005138.job
[2025-07-23 09:48:26] 2025-07-23 13:47:46,739 | INFO     | adding to output.list: log.45697541._005138.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/fd/7e/log.45697541._005138.job.log.tg
[2025-07-23 09:48:26] 2025-07-23 13:47:46,741 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-07-23 09:48:26] 2025-07-23 13:47:46,741 | INFO     | summary of transferred files:
[2025-07-23 09:48:26] 2025-07-23 13:47:46,741 | INFO     |  -- lfn=log.45697541._005138.job.log.tgz.1, status_code=0, status=transferred
[2025-07-23 09:48:26] 2025-07-23 13:47:46,741 | INFO     | stage-out finished correctly
[2025-07-23 09:48:26] 2025-07-23 13:47:46,895 | INFO     | monitor loop #374: job 0:6743008201 is in state 'finished'
[2025-07-23 09:48:26] 2025-07-23 13:47:46,895 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-23 09:48:26] 2025-07-23 13:47:48,243 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-07-23 09:48:26] 2025-07-23 13:47:48,830 | INFO     | job 6743008201 has state=finished
[2025-07-23 09:48:26] 2025-07-23 13:47:48,830 | INFO     | preparing for final server update for job 6743008201 in state='finished'
[2025-07-23 09:48:26] 2025-07-23 13:47:48,832 | INFO     | this job has now completed (state=finished)
[2025-07-23 09:48:26] 2025-07-23 13:47:48,832 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-07-23 09:48:26] 2025-07-23 13:47:48,832 | INFO     | log transfer has been attempted: DONE
[2025-07-23 09:48:26] 2025-07-23 13:47:48,832 | INFO     | job 6743008201 has finished - writing final server update
[2025-07-23 09:48:26] 2025-07-23 13:47:48,832 | INFO     | total number of processed events: 400 (read)
[2025-07-23 09:48:26] 2025-07-23 13:47:48,833 | INFO     | executing command: lscpu
[2025-07-23 09:48:26] 2025-07-23 13:47:48,902 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-07-23 09:48:26] 2025-07-23 13:47:49,399 | INFO     | monitor loop #375: job 0:6743008201 is in state 'finished'
[2025-07-23 09:48:26] 2025-07-23 13:47:49,399 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-23 09:48:26] 2025-07-23 13:47:51,903 | INFO     | monitor loop #376: job 0:6743008201 is in state 'finished'
[2025-07-23 09:48:26] 2025-07-23 13:47:51,903 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-23 09:48:26] 2025-07-23 13:47:53,288 | INFO     | CPU arch script returned: x86-64-v4
[2025-07-23 09:48:26] 2025-07-23 13:47:53,293 | INFO     | found 64 cores (32 cores per socket, 2 sockets) HT, CPU MHz: 3729.734484375
[2025-07-23 09:48:26] 2025-07-23 13:47:53,307 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6743008201/memory_monitor_summary.json (trf name=prmon)
[2025-07-23 09:48:26] 2025-07-23 13:47:53,308 | INFO     | extracted standard info from prmon json
[2025-07-23 09:48:26] 2025-07-23 13:47:53,308 | INFO     | extracted standard memory fields from prmon json
[2025-07-23 09:48:26] 2025-07-23 13:47:53,308 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-23 09:48:26] 2025-07-23 13:47:53,308 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-23 09:48:26] 2025-07-23 13:47:53,309 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-23 09:48:26] 2025-07-23 13:47:53,310 | INFO     | fitting pss+swap vs Time
[2025-07-23 09:48:26] 2025-07-23 13:47:53,310 | INFO     | sum of square deviations: 152858680.0
[2025-07-23 09:48:26] 2025-07-23 13:47:53,311 | INFO     | sum of deviations: -15475344980.0
[2025-07-23 09:48:26] 2025-07-23 13:47:53,311 | INFO     | mean x: 1753275917.0
[2025-07-23 09:48:26] 2025-07-23 13:47:53,311 | INFO     | mean y: 2395841.0506329113
[2025-07-23 09:48:26] 2025-07-23 13:47:53,311 | INFO     | -- intersect: 177503272210.65454
[2025-07-23 09:48:26] 2025-07-23 13:47:53,311 | INFO     | intersect: 177503272210.65454
[2025-07-23 09:48:26] 2025-07-23 13:47:53,311 | INFO     | chi2: 0.05789277864330524
[2025-07-23 09:48:26] 2025-07-23 13:47:53,311 | INFO     | -- intersect: 177503272210.65454
[2025-07-23 09:48:26] 2025-07-23 13:47:53,311 | INFO     | current memory leak: -101.24 B/s (using 79 data points, chi2=0.06)
[2025-07-23 09:48:26] 2025-07-23 13:47:53,311 | INFO     | could have reported an average CPU frequency of 3740 MHz (6 samples)
[2025-07-23 09:48:26] 2025-07-23 13:47:53,311 | INFO     | ..............................
[2025-07-23 09:48:26] 2025-07-23 13:47:53,312 | INFO     | . Timing measurements:
[2025-07-23 09:48:26] 2025-07-23 13:47:53,312 | INFO     | . get job = 0 s
[2025-07-23 09:48:26] 2025-07-23 13:47:53,312 | INFO     | . initial setup = 3 s
[2025-07-23 09:48:26] 2025-07-23 13:47:53,312 | INFO     | . payload setup = 23 s
[2025-07-23 09:48:26] 2025-07-23 13:47:53,312 | INFO     | . stage-in = 0 s
[2025-07-23 09:48:26] 2025-07-23 13:47:53,312 | INFO     | . payload execution = 5237 s
[2025-07-23 09:48:26] 2025-07-23 13:47:53,312 | INFO     | . stage-out = 0 s
[2025-07-23 09:48:26] 2025-07-23 13:47:53,312 | INFO     | . log creation = 0 s
[2025-07-23 09:48:26] 2025-07-23 13:47:53,312 | INFO     | ..............................
[2025-07-23 09:48:26] 2025-07-23 13:47:53,373 | INFO     | 
[2025-07-23 09:48:26] 2025-07-23 13:47:53,373 | INFO     | job summary report
[2025-07-23 09:48:26] 2025-07-23 13:47:53,373 | INFO     | --------------------------------------------------
[2025-07-23 09:48:26] 2025-07-23 13:47:53,373 | INFO     | PanDA job id: 6743008201
[2025-07-23 09:48:26] 2025-07-23 13:47:53,373 | INFO     | task id: 45697541
[2025-07-23 09:48:26] 2025-07-23 13:47:53,373 | INFO     | errors: (none)
[2025-07-23 09:48:26] 2025-07-23 13:47:53,373 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-23 09:48:26] 2025-07-23 13:47:53,373 | INFO     | pilot state: finished 
[2025-07-23 09:48:26] 2025-07-23 13:47:53,373 | INFO     | transexitcode: 0
[2025-07-23 09:48:26] 2025-07-23 13:47:53,374 | INFO     | exeerrorcode: 0
[2025-07-23 09:48:26] 2025-07-23 13:47:53,374 | INFO     | exeerrordiag: 
[2025-07-23 09:48:26] 2025-07-23 13:47:53,374 | INFO     | exitcode: 0
[2025-07-23 09:48:26] 2025-07-23 13:47:53,374 | INFO     | exitmsg: OK
[2025-07-23 09:48:26] 2025-07-23 13:47:53,374 | INFO     | cpuconsumptiontime: 35122 s
[2025-07-23 09:48:26] 2025-07-23 13:47:53,374 | INFO     | nevents: 400
[2025-07-23 09:48:26] 2025-07-23 13:47:53,374 | INFO     | neventsw: 0
[2025-07-23 09:48:26] 2025-07-23 13:47:53,374 | INFO     | pid: 343750
[2025-07-23 09:48:26] 2025-07-23 13:47:53,374 | INFO     | pgrp: 343750
[2025-07-23 09:48:26] 2025-07-23 13:47:53,374 | INFO     | corecount: 8
[2025-07-23 09:48:26] 2025-07-23 13:47:53,374 | INFO     | event service: False
[2025-07-23 09:48:26] 2025-07-23 13:47:53,374 | INFO     | sizes: {0: 2397516, 11: 2397516, 17: 2397806, 21: 2397834, 5264: 2424372, 5265: 2433370, 5266: 2433554, 5271: 2433748}
[2025-07-23 09:48:26] 2025-07-23 13:47:53,374 | INFO     | --------------------------------------------------
[2025-07-23 09:48:26] 2025-07-23 13:47:53,374 | INFO     | 
[2025-07-23 09:48:26] 2025-07-23 13:47:53,374 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-07-23 09:48:26] 2025-07-23 13:47:53,398 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-23 09:48:26] 2025-07-23 13:47:53,398 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-23 09:48:26] 2025-07-23 13:47:53,399 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-23 09:48:26] 2025-07-23 13:47:53,399 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-23 09:48:26] 2025-07-23 13:47:53,399 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-23 09:48:26] 2025-07-23 13:47:53,399 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-23 09:48:26] 2025-07-23 13:47:53,399 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-23 09:48:26] 2025-07-23 13:47:53,399 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-23 09:48:26] 2025-07-23 13:47:53,399 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-23 09:48:26] 2025-07-23 13:47:53,399 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-23 09:48:26] 2025-07-23 13:47:53,399 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-23 09:48:26] 2025-07-23 13:47:53,399 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-23 09:48:26] 2025-07-23 13:47:53,399 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-23 09:48:26] 2025-07-23 13:47:53,399 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-23 09:48:26] 2025-07-23 13:47:53,399 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-23 09:48:26] 2025-07-23 13:47:53,399 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-23 09:48:26] 2025-07-23 13:47:53,399 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-23 09:48:26] 2025-07-23 13:47:53,399 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-23 09:48:26] 2025-07-23 13:47:53,399 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-23 09:48:26] 2025-07-23 13:47:53,399 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-23 09:48:26] 2025-07-23 13:47:53,399 | INFO     | job 6743008201 has completed (purged errors)
[2025-07-23 09:48:26] 2025-07-23 13:47:53,399 | INFO     | overall cleanup function is called
[2025-07-23 09:48:26] 2025-07-23 13:47:54,406 | INFO     | --- collectZombieJob: --- 10, [343750]
[2025-07-23 09:48:26] 2025-07-23 13:47:54,406 | INFO     | zombie collector waiting for pid 343750
[2025-07-23 09:48:26] 2025-07-23 13:47:54,406 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-23 09:48:26] 2025-07-23 13:47:54,406 | INFO     | collected zombie processes
[2025-07-23 09:48:26] 2025-07-23 13:47:54,406 | INFO     | will attempt to kill all subprocesses of pid=343750
[2025-07-23 09:48:26] 2025-07-23 13:47:54,827 | INFO     | process IDs to be killed: [343750] (in reverse order)
[2025-07-23 09:48:26] 2025-07-23 13:47:54,979 | WARNING  | found no corresponding commands to process id(s)
[2025-07-23 09:48:26] 2025-07-23 13:47:54,979 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-23 09:48:26] 2025-07-23 13:47:55,002 | INFO     | did not find any defunct processes belonging to 343750
[2025-07-23 09:48:26] 2025-07-23 13:47:55,024 | INFO     | did not find any defunct processes belonging to 343750
[2025-07-23 09:48:26] 2025-07-23 13:47:55,024 | INFO     | ready for new job
[2025-07-23 09:48:26] 2025-07-23 13:47:55,024 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-23 09:48:26] 2025-07-23 13:47:55,026 | INFO     | ***************************************
[2025-07-23 09:48:26] 2025-07-23 13:47:55,026 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-23 09:48:26] 2025-07-23 13:47:55,026 | INFO     | ***************************************
[2025-07-23 09:48:26] 2025-07-23 13:47:55,026 | INFO     | 
[2025-07-23 09:48:26] 2025-07-23 13:47:55,044 | INFO     | architecture information:
[2025-07-23 09:48:26] 2025-07-23 13:47:55,044 | INFO     | executing command: cat /etc/os-release
[2025-07-23 09:48:26] 2025-07-23 13:47:55,060 | INFO     | cat /etc/os-release:
[2025-07-23 09:48:26] NAME="CentOS Linux"
[2025-07-23 09:48:26] VERSION="7 (Core)"
[2025-07-23 09:48:26] ID="centos"
[2025-07-23 09:48:26] ID_LIKE="rhel fedora"
[2025-07-23 09:48:26] VERSION_ID="7"
[2025-07-23 09:48:26] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-23 09:48:26] ANSI_COLOR="0;31"
[2025-07-23 09:48:26] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-23 09:48:26] HOME_URL="https://www.centos.org/"
[2025-07-23 09:48:26] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-23 09:48:26] 
[2025-07-23 09:48:26] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-23 09:48:26] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-23 09:48:26] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-23 09:48:26] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-23 09:48:26] 
[2025-07-23 09:48:26] 2025-07-23 13:47:55,060 | INFO     | ***************************************
[2025-07-23 09:48:26] 2025-07-23 13:47:55,563 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-07-23 09:48:26] 2025-07-23 13:47:55,580 | INFO     | sufficient remaining disk space (170298179584 B)
[2025-07-23 09:48:26] 2025-07-23 13:47:55,580 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-23 09:48:26] 2025-07-23 13:47:55,580 | INFO     | current server update state: UPDATING_FINAL
[2025-07-23 09:48:26] 2025-07-23 13:47:55,580 | INFO     | update_server=False
[2025-07-23 09:48:26] 2025-07-23 13:47:55,580 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-23 09:48:26] 2025-07-23 13:47:55,581 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-23 09:48:26] 2025-07-23 13:47:55,581 | INFO     | aborting loop
[2025-07-23 09:48:26] 2025-07-23 13:47:55,581 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-23 09:48:26] 2025-07-23 13:47:55,841 | INFO     | all job control threads have been joined
[2025-07-23 09:48:26] 2025-07-23 13:47:56,143 | INFO     | all data control threads have been joined
[2025-07-23 09:48:26] 2025-07-23 13:47:56,240 | INFO     | all payload control threads have been joined
[2025-07-23 09:48:26] 2025-07-23 13:47:56,585 | INFO     | [job] retrieve thread has finished
[2025-07-23 09:48:26] 2025-07-23 13:47:56,586 | INFO     | [job] job monitor thread has finished
[2025-07-23 09:48:26] 2025-07-23 13:47:56,846 | INFO     | [job] control thread has finished
[2025-07-23 09:48:26] 2025-07-23 13:47:57,109 | INFO     | [data] copytool_in thread has finished
[2025-07-23 09:48:26] 2025-07-23 13:47:57,148 | INFO     | [data] control thread has finished
[2025-07-23 09:48:26] 2025-07-23 13:47:57,245 | INFO     | [payload] control thread has finished
[2025-07-23 09:48:26] 2025-07-23 13:47:57,249 | INFO     | [payload] failed_post thread has finished
[2025-07-23 09:48:26] 2025-07-23 13:47:57,383 | INFO     | [payload] execute_payloads thread has finished
[2025-07-23 09:48:26] 2025-07-23 13:47:57,546 | INFO     | [job] validate thread has finished
[2025-07-23 09:48:26] 2025-07-23 13:47:57,586 | INFO     | [data] copytool_out thread has finished
[2025-07-23 09:48:26] 2025-07-23 13:47:57,773 | INFO     | [payload] validate_pre thread has finished
[2025-07-23 09:48:26] 2025-07-23 13:47:57,897 | INFO     | [job] create_data_payload thread has finished
[2025-07-23 09:48:26] 2025-07-23 13:47:57,980 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-23 09:48:26] 2025-07-23 13:47:58,131 | INFO     | [payload] validate_post thread has finished
[2025-07-23 09:48:26] 2025-07-23 13:47:58,383 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-23 09:48:26] 2025-07-23 13:47:58,809 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-23 09:48:26] 2025-07-23 13:47:59,388 | INFO     | [job] queue monitor thread has finished
[2025-07-23 09:48:26] 2025-07-23 13:48:02,815 | INFO     | [data] queue_monitor thread has finished
[2025-07-23 09:48:26] 2025-07-23 13:48:04,630 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140640972982080)>', '<ExcThread(monitor, started 140640616691456)>']
[2025-07-23 09:48:26] 2025-07-23 13:48:09,655 | INFO     | all workflow threads have been joined
[2025-07-23 09:48:26] 2025-07-23 13:48:09,656 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-23 09:48:26] 2025-07-23 13:48:09,656 | INFO     | traces error code: 0
[2025-07-23 09:48:26] 2025-07-23 13:48:09,656 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-23 09:48:26] 2025-07-23 13:48:25,908 | INFO     | PID=334643 has CPU usage=5.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-07-23 09:48:26] 2025-07-23 13:48:25,908 | INFO     | .. there are 26 such processes running
[2025-07-23 09:48:26] 2025-07-23 13:48:25,909 | INFO     | found 0 job(s) in 20 queues
[2025-07-23 09:48:26] 2025-07-23 13:48:25,909 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-23 09:48:26] 2025-07-23 13:48:25,909 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-23 09:48:26] 2025-07-23 13:48:25,909 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-23 09:48:26] 2025-07-23 13:48:25,909 | INFO     | [monitor] control thread has ended
[2025-07-23 09:48:26] 2025-07-23 13:48:26,185 [wrapper] ==== pilot stdout END ====
[2025-07-23 09:48:26] 2025-07-23 13:48:26,188 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-23 09:48:26] 2025-07-23 13:48:26,191 [wrapper] pilotpid: 334643
[2025-07-23 09:48:26] 2025-07-23 13:48:26,194 [wrapper] Pilot exit status: 0
[2025-07-23 09:48:26] 2025-07-23 13:48:26,236 [wrapper] pandaids: 6743008201
[2025-07-23 09:48:26] 2025-07-23 13:48:26,347 [wrapper] cleanup supervisor_pilot  737324 334644
[2025-07-23 09:48:26] 2025-07-23 13:48:26,350 [wrapper] Test setup, not cleaning
[2025-07-23 09:48:26] 2025-07-23 13:48:26,354 [wrapper] apfmon messages muted
[2025-07-23 09:48:26] 2025-07-23 13:48:26,357 [wrapper] ==== wrapper stdout END ====
[2025-07-23 09:48:26] 2025-07-23 13:48:26,359 [wrapper] ==== wrapper stderr END ====
[2025-07-23 09:48:26]  *** Error codes and diagnostics ***
[2025-07-23 09:48:26]     "exeErrorCode": 0,
[2025-07-23 09:48:26]     "exeErrorDiag": "",
[2025-07-23 09:48:26]     "pilotErrorCode": 0,
[2025-07-23 09:48:26]     "pilotErrorDiag": "",
[2025-07-23 09:48:26]  *** Listing of results directory ***
[2025-07-23 09:48:26] total 633640
[2025-07-23 09:48:26] -rw-r--r--. 1 boincer umatlas      5112 Jul 22 23:15 queuedata.json
[2025-07-23 09:48:26] -rwx------. 1 boincer umatlas     36292 Jul 22 23:19 runpilot2-wrapper.sh
[2025-07-23 09:48:26] -rw-r--r--. 1 boincer umatlas    530466 Jul 22 23:19 pilot3.tar.gz
[2025-07-23 09:48:26] -rw-r--r--. 1 boincer umatlas       100 Jul 23 08:18 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-23 09:48:26] -rwxr-xr-x. 1 boincer umatlas      7986 Jul 23 08:18 run_atlas
[2025-07-23 09:48:26] -rw-r--r--. 1 boincer umatlas       105 Jul 23 08:18 job.xml
[2025-07-23 09:48:26] -rw-r--r--. 2 boincer umatlas 343304170 Jul 23 08:18 EVNT.45697539._000172.pool.root.1
[2025-07-23 09:48:26] -rw-r--r--. 2 boincer umatlas     15095 Jul 23 08:18 start_atlas.sh
[2025-07-23 09:48:26] drwxrwx--x. 2 boincer umatlas      4096 Jul 23 08:18 shared
[2025-07-23 09:48:26] -rw-r--r--. 2 boincer umatlas    542893 Jul 23 08:18 input.tar.gz
[2025-07-23 09:48:26] -rw-r--r--. 1 boincer umatlas         0 Jul 23 08:18 boinc_lockfile
[2025-07-23 09:48:26] -rw-r--r--. 1 boincer umatlas      2602 Jul 23 08:18 pandaJob.out
[2025-07-23 09:48:26] -rw-------. 1 boincer umatlas    978437 Jul 23 08:19 agis_schedconf.cvmfs.json
[2025-07-23 09:48:26] -rw-------. 1 boincer umatlas   1593041 Jul 23 08:19 agis_ddmendpoints.agis.ALL.json
[2025-07-23 09:48:26] drwx------. 4 boincer umatlas      4096 Jul 23 08:19 pilot3
[2025-07-23 09:48:26] -rw-------. 1 boincer umatlas 300048225 Jul 23 09:47 HITS.45697541._005138.pool.root.1
[2025-07-23 09:48:26] -rw-r--r--. 1 boincer umatlas       530 Jul 23 09:47 boinc_task_state.xml
[2025-07-23 09:48:26] -rw-r--r--. 1 boincer umatlas      7161 Jul 23 09:47 init_data.xml
[2025-07-23 09:48:26] -rw-------. 1 boincer umatlas      1056 Jul 23 09:47 memory_monitor_summary.json
[2025-07-23 09:48:26] -rw-------. 1 boincer umatlas    307492 Jul 23 09:47 log.45697541._005138.job.log.tgz.1
[2025-07-23 09:48:26] -rw-------. 1 boincer umatlas      7787 Jul 23 09:47 heartbeat.json
[2025-07-23 09:48:26] -rw-r--r--. 1 boincer umatlas      8192 Jul 23 09:48 boinc_mmap_file
[2025-07-23 09:48:26] -rw-r--r--. 1 boincer umatlas        27 Jul 23 09:48 wrapper_checkpoint.txt
[2025-07-23 09:48:26] -rw-------. 1 boincer umatlas        95 Jul 23 09:48 pilot_heartbeat.json
[2025-07-23 09:48:26] -rw-------. 1 boincer umatlas       822 Jul 23 09:48 pilotlog.txt
[2025-07-23 09:48:26] -rw-------. 1 boincer umatlas    503709 Jul 23 09:48 log.45697541._005138.job.log.1
[2025-07-23 09:48:26] -rw-------. 1 boincer umatlas       357 Jul 23 09:48 output.list
[2025-07-23 09:48:26] -rw-r--r--. 1 boincer umatlas       620 Jul 23 09:48 runtime_log
[2025-07-23 09:48:26] -rw-------. 1 boincer umatlas    829440 Jul 23 09:48 result.tar.gz
[2025-07-23 09:48:26] -rw-r--r--. 1 boincer umatlas      8650 Jul 23 09:48 runtime_log.err
[2025-07-23 09:48:26] -rw-------. 1 boincer umatlas       655 Jul 23 09:48 a8JKDmKCfy7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmOnKLDminDTHo.diag
[2025-07-23 09:48:26] -rw-r--r--. 1 boincer umatlas     21600 Jul 23 09:48 stderr.txt
[2025-07-23 09:48:26] HITS file was successfully produced:
[2025-07-23 09:48:26] -rw-------. 1 boincer umatlas 300048225 Jul 23 09:47 shared/HITS.pool.root.1
[2025-07-23 09:48:26]  *** Contents of shared directory: ***
[2025-07-23 09:48:26] total 629644
[2025-07-23 09:48:26] -rw-r--r--. 2 boincer umatlas 343304170 Jul 23 08:18 ATLAS.root_0
[2025-07-23 09:48:26] -rw-r--r--. 2 boincer umatlas     15095 Jul 23 08:18 start_atlas.sh
[2025-07-23 09:48:26] -rw-r--r--. 2 boincer umatlas    542893 Jul 23 08:18 input.tar.gz
[2025-07-23 09:48:26] -rw-------. 1 boincer umatlas 300048225 Jul 23 09:47 HITS.pool.root.1
[2025-07-23 09:48:26] -rw-------. 1 boincer umatlas    829440 Jul 23 09:48 result.tar.gz
09:48:28 (328695): run_atlas exited; CPU time 35235.841324
09:48:28 (328695): called boinc_finish(0)

</stderr_txt>
]]>

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