Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
04:12:58 (1058399): wrapper (7.7.26015): starting
04:12:58 (1058399): wrapper: running run_atlas (--nthreads 12)
[2025-07-23 04:12:58] Arguments: --nthreads 12
[2025-07-23 04:12:58] Threads: 12
[2025-07-23 04:12:58] Checking for CVMFS
[2025-07-23 04:12:59] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-23 04:12:59] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-23 04:12:59] Running cvmfs_config stat atlas.cern.ch
[2025-07-23 04:13:00] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-23 04:13:00] 2.11.5.0 7066 31311 264780 148655 3 334 40984209 45568001 18163 130560 0 181060034 99.713 150077517 27409 http://cvmfs-s1bnl.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://206.12.9.162:3129 1
[2025-07-23 04:13:00] CVMFS is ok
[2025-07-23 04:13:00] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-07-23 04:13:00] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-07-23 04:13:00] Further information can be found at the LHC@home message board.
[2025-07-23 04:13:00] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-23 04:13:00] Checking for apptainer binary...
[2025-07-23 04:13:00] Using apptainer found in PATH at /usr/bin/apptainer
[2025-07-23 04:13:00] Running /usr/bin/apptainer --version
[2025-07-23 04:13:01] apptainer version 1.4.1-1.el9
[2025-07-23 04:13:01] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-23 04:13:02] wns0030.triumf.lcg
[2025-07-23 04:13:02] apptainer works
[2025-07-23 04:13:02] Set ATHENA_PROC_NUMBER=12
[2025-07-23 04:13:02] Set ATHENA_CORE_NUMBER=12
[2025-07-23 04:13:02] Starting ATLAS job with PandaID=6741883461
[2025-07-23 04:13:02] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-23 04:18:24]  *** The last 200 lines of the pilot log: ***
[2025-07-23 04:18:24] 2025-07-23 11:17:52,163 | INFO     | extracted standard memory fields from prmon json
[2025-07-23 04:18:24] 2025-07-23 11:17:52,163 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-23 04:18:24] 2025-07-23 11:17:52,164 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-23 04:18:24] 2025-07-23 11:17:52,164 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-23 04:18:24] 2025-07-23 11:17:52,165 | WARNING  | wrong length of table data, x=[1753269306.0], y=[984.0] (must be same and length>=4)
[2025-07-23 04:18:24] 2025-07-23 11:17:52,165 | INFO     | could have reported an average CPU frequency of 2081 MHz (4 samples)
[2025-07-23 04:18:24] 2025-07-23 11:17:52,165 | INFO     | ..............................
[2025-07-23 04:18:24] 2025-07-23 11:17:52,165 | INFO     | . Timing measurements:
[2025-07-23 04:18:24] 2025-07-23 11:17:52,165 | INFO     | . get job = 0 s
[2025-07-23 04:18:24] 2025-07-23 11:17:52,165 | INFO     | . initial setup = 3 s
[2025-07-23 04:18:24] 2025-07-23 11:17:52,165 | INFO     | . payload setup = 17 s
[2025-07-23 04:18:24] 2025-07-23 11:17:52,165 | INFO     | . stage-in = 0 s
[2025-07-23 04:18:24] 2025-07-23 11:17:52,165 | INFO     | . payload execution = 39 s
[2025-07-23 04:18:24] 2025-07-23 11:17:52,166 | INFO     | . stage-out = 0 s
[2025-07-23 04:18:24] 2025-07-23 11:17:52,166 | INFO     | . log creation = 0 s
[2025-07-23 04:18:24] 2025-07-23 11:17:52,166 | INFO     | ..............................
[2025-07-23 04:18:24] 2025-07-23 11:17:52,166 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-07-23 04:18:24] 2025-07-23 11:17:52,166 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6741883461/pilotlog.txt
[2025-07-23 04:18:24] 2025-07-23 11:17:52,178 | WARNING  | detected the following tail of warning/fatal messages in the pilot log:
[2025-07-23 04:18:24] - Log from pilotlog.txt -
[2025-07-23 04:18:24] 2025-07-23 11:17:52,162 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6741883461/memory_monitor_summary.json (trf name=prmon)
[2025-07-23 04:18:24] 2025-07-23 11:17:52,163 | INFO     | extracted standard info from prmon json
[2025-07-23 04:18:24] 2025-07-23 11:17:52,163 | INFO     | extracted standard memory fields from prmon json
[2025-07-23 04:18:24] 2025-07-23 11:17:52,163 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-23 04:18:24] 2025-07-23 11:17:52,164 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-23 04:18:24] 2025-07-23 11:17:52,164 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-23 04:18:24] 2025-07-23 11:17:52,165 | WARNING  | wrong length of table data, x=[1753269306.0], y=[984.0] (must be same and length>=4)
[2025-07-23 04:18:24] 2025-07-23 11:17:52,165 | INFO     | could have reported an average CPU frequency of 2081 MHz (4 samples)
[2025-07-23 04:18:24] 2025-07-23 11:17:52,165 | INFO     | ..............................
[2025-07-23 04:18:24] 2025-07-23 11:17:52,165 | INFO     | . Timing measurements:
[2025-07-23 04:18:24] 2025-07-23 11:17:52,165 | INFO     | . get job = 0 s
[2025-07-23 04:18:24] 2025-07-23 11:17:52,165 | INFO     | . initial setup = 3 s
[2025-07-23 04:18:24] 2025-07-23 11:17:52,165 | INFO     | . payload setup = 17 s
[2025-07-23 04:18:24] 2025-07-23 11:17:52,165 | INFO     | . stage-in = 0 s
[2025-07-23 04:18:24] 2025-07-23 11:17:52,165 | INFO     | . payload execution = 39 s
[2025-07-23 04:18:24] 2025-07-23 11:17:52,166 | INFO     | . stage-out = 0 s
[2025-07-23 04:18:24] 2025-07-23 11:17:52,166 | INFO     | . log creation = 0 s
[2025-07-23 04:18:24] 2025-07-23 11:17:52,166 | INFO     | ..............................
[2025-07-23 04:18:24] 2025-07-23 11:17:52,166 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-07-23 04:18:24] 2025-07-23 11:17:52,166 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6741883461/pilotlog.txt
[2025-07-23 04:18:24] 2025-07-23 11:17:52,179 | WARNING  | 
[2025-07-23 04:18:24] [begin log extracts]
[2025-07-23 04:18:24] - Log from pilotlog.txt -
[2025-07-23 04:18:24] 2025-07-23 11:17:52,162 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6741883461/memory_monitor_summary.json (trf name=prmon)
[2025-07-23 04:18:24] 2025-07-23 11:17:52,163 | INFO     | extracted standard info from prmon json
[2025-07-23 04:18:24] 2025-07-23 11:17:52,163 | INFO     | extracted standard memory fields from prmon json
[2025-07-23 04:18:24] 2025-07-23 11:17:52,163 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-23 04:18:24] 2025-07-23 11:17:52,164 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-23 04:18:24] 2025-07-23 11:17:52,164 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-23 04:18:24] 2025-07-23 11:17:52,165 | WARNING  | wrong length of table data, x=[1753269306.0], y=[984.0] (must be same and length>=4)
[2025-07-23 04:18:24] 2025-07-23 11:17:52,165 | INFO     | could have reported an average CPU frequency of 2081 MHz (4 samples)
[2025-07-23 04:18:24] 2025-07-23 11:17:52,165 | INFO     | ..............................
[2025-07-23 04:18:24] 2025-07-23 11:17:52,165 | INFO     | . Timing measurements:
[2025-07-23 04:18:24] 2025-07-23 11:17:52,165 | INFO     | . get job = 0 s
[2025-07-23 04:18:24] 2025-07-23 11:17:52,165 | INFO     | . initial setup = 3 s
[2025-07-23 04:18:24] 2025-07-23 11:17:52,165 | INFO     | . payload setup = 17 s
[2025-07-23 04:18:24] 2025-07-23 11:17:52,165 | INFO     | . stage-in = 0 s
[2025-07-23 04:18:24] 2025-07-23 11:17:52,165 | INFO     | . payload execution = 39 s
[2025-07-23 04:18:24] 2025-07-23 11:17:52,166 | INFO     | . stage-out = 0 s
[2025-07-23 04:18:24] 2025-07-23 11:17:52,166 | INFO     | . log creation = 0 s
[2025-07-23 04:18:24] 2025-07-23 11:17:52,166 | INFO     | ..............................
[2025-07-23 04:18:24] 2025-07-23 11:17:52,166 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-07-23 04:18:24] 2025-07-23 11:17:52,166 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6741883461/pilotlog.txt
[2025-07-23 04:18:24] [end log extracts]
[2025-07-23 04:18:24] 2025-07-23 11:17:52,179 | WARNING  | pilotErrorCodes = [1305] (will report primary/first error code)
[2025-07-23 04:18:24] 2025-07-23 11:17:52,180 | WARNING  | pilotErrorDiags = ['Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return c
[2025-07-23 04:18:24] 2025-07-23 11:17:52,254 | INFO     | 
[2025-07-23 04:18:24] 2025-07-23 11:17:52,254 | INFO     | job summary report
[2025-07-23 04:18:24] 2025-07-23 11:17:52,254 | INFO     | --------------------------------------------------
[2025-07-23 04:18:24] 2025-07-23 11:17:52,254 | INFO     | PanDA job id: 6741883461
[2025-07-23 04:18:24] 2025-07-23 11:17:52,254 | INFO     | task id: 45697472
[2025-07-23 04:18:24] 2025-07-23 11:17:52,254 | INFO     | error 1/1: 1305: Failed to execute payload:PyJobTransforms.transform.execute 2025-07-23 04:15:24,765 CRITICAL Transform executor raised TransformValidationExceptio
[2025-07-23 04:18:24] 2025-07-23 11:17:52,254 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-23 04:18:24] 2025-07-23 11:17:52,254 | INFO     | pilot state: failed 
[2025-07-23 04:18:24] 2025-07-23 11:17:52,254 | INFO     | transexitcode: 65
[2025-07-23 04:18:24] 2025-07-23 11:17:52,254 | INFO     | exeerrorcode: 65
[2025-07-23 04:18:24] 2025-07-23 11:17:52,254 | INFO     | exeerrordiag: Non-zero return code from EVNTtoHITS (1)
[2025-07-23 04:18:24] 2025-07-23 11:17:52,254 | INFO     | exitcode: 65
[2025-07-23 04:18:24] 2025-07-23 11:17:52,254 | INFO     | exitmsg: Non-zero return code from EVNTtoHITS (1)
[2025-07-23 04:18:24] 2025-07-23 11:17:52,255 | INFO     | cpuconsumptiontime: 19 s
[2025-07-23 04:18:24] 2025-07-23 11:17:52,255 | INFO     | nevents: 0
[2025-07-23 04:18:24] 2025-07-23 11:17:52,255 | INFO     | neventsw: 0
[2025-07-23 04:18:24] 2025-07-23 11:17:52,255 | INFO     | pid: 1068357
[2025-07-23 04:18:24] 2025-07-23 11:17:52,255 | INFO     | pgrp: 1068357
[2025-07-23 04:18:24] 2025-07-23 11:17:52,255 | INFO     | corecount: 12
[2025-07-23 04:18:24] 2025-07-23 11:17:52,255 | INFO     | event service: False
[2025-07-23 04:18:24] 2025-07-23 11:17:52,255 | INFO     | sizes: {0: 2397309, 1: 2397480, 2: 2397536, 14: 2397536, 18: 2397826, 25: 2397854, 61: 2421226, 63: 2425518, 66: 2425546, 199: 2425712}
[2025-07-23 04:18:24] 2025-07-23 11:17:52,255 | INFO     | --------------------------------------------------
[2025-07-23 04:18:24] 2025-07-23 11:17:52,255 | INFO     | 
[2025-07-23 04:18:24] 2025-07-23 11:17:52,255 | INFO     | executing command: ls -lF /home/boinc/slots/0
[2025-07-23 04:18:24] 2025-07-23 11:17:52,273 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-23 04:18:24] 2025-07-23 11:17:52,274 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-23 04:18:24] 2025-07-23 11:17:52,274 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-23 04:18:24] 2025-07-23 11:17:52,274 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-23 04:18:24] 2025-07-23 11:17:52,274 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-23 04:18:24] 2025-07-23 11:17:52,274 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-23 04:18:24] 2025-07-23 11:17:52,274 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-23 04:18:24] 2025-07-23 11:17:52,274 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-23 04:18:24] 2025-07-23 11:17:52,274 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-23 04:18:24] 2025-07-23 11:17:52,274 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-23 04:18:24] 2025-07-23 11:17:52,274 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-23 04:18:24] 2025-07-23 11:17:52,274 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-23 04:18:24] 2025-07-23 11:17:52,274 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-23 04:18:24] 2025-07-23 11:17:52,274 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-23 04:18:24] 2025-07-23 11:17:52,275 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-23 04:18:24] 2025-07-23 11:17:52,275 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-23 04:18:24] 2025-07-23 11:17:52,275 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-23 04:18:24] 2025-07-23 11:17:52,275 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-23 04:18:24] 2025-07-23 11:17:52,275 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-23 04:18:24] 2025-07-23 11:17:52,275 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-23 04:18:24] 2025-07-23 11:17:52,275 | INFO     | job 6741883461 has completed (purged errors)
[2025-07-23 04:18:24] 2025-07-23 11:17:52,275 | INFO     | overall cleanup function is called
[2025-07-23 04:18:24] 2025-07-23 11:17:53,283 | INFO     | --- collectZombieJob: --- 10, [1068357]
[2025-07-23 04:18:24] 2025-07-23 11:17:53,283 | INFO     | zombie collector waiting for pid 1068357
[2025-07-23 04:18:24] 2025-07-23 11:17:53,284 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-23 04:18:24] 2025-07-23 11:17:53,284 | INFO     | collected zombie processes
[2025-07-23 04:18:24] 2025-07-23 11:17:53,284 | INFO     | will attempt to kill all subprocesses of pid=1068357
[2025-07-23 04:18:24] 2025-07-23 11:17:54,162 | INFO     | process IDs to be killed: [1068357] (in reverse order)
[2025-07-23 04:18:24] 2025-07-23 11:17:54,648 | WARNING  | found no corresponding commands to process id(s)
[2025-07-23 04:18:24] 2025-07-23 11:17:54,648 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-23 04:18:24] 2025-07-23 11:17:54,676 | INFO     | did not find any defunct processes belonging to 1068357
[2025-07-23 04:18:24] 2025-07-23 11:17:54,684 | INFO     | did not find any defunct processes belonging to 1068357
[2025-07-23 04:18:24] 2025-07-23 11:17:54,684 | INFO     | ready for new job
[2025-07-23 04:18:24] 2025-07-23 11:17:54,684 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-23 04:18:24] 2025-07-23 11:17:54,686 | INFO     | ***************************************
[2025-07-23 04:18:24] 2025-07-23 11:17:54,686 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-23 04:18:24] 2025-07-23 11:17:54,686 | INFO     | ***************************************
[2025-07-23 04:18:24] 2025-07-23 11:17:54,686 | INFO     | 
[2025-07-23 04:18:24] 2025-07-23 11:17:54,688 | INFO     | architecture information:
[2025-07-23 04:18:24] 2025-07-23 11:17:54,689 | INFO     | executing command: cat /etc/os-release
[2025-07-23 04:18:24] 2025-07-23 11:17:54,707 | INFO     | cat /etc/os-release:
[2025-07-23 04:18:24] NAME="CentOS Linux"
[2025-07-23 04:18:24] VERSION="7 (Core)"
[2025-07-23 04:18:24] ID="centos"
[2025-07-23 04:18:24] ID_LIKE="rhel fedora"
[2025-07-23 04:18:24] VERSION_ID="7"
[2025-07-23 04:18:24] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-23 04:18:24] ANSI_COLOR="0;31"
[2025-07-23 04:18:24] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-23 04:18:24] HOME_URL="https://www.centos.org/"
[2025-07-23 04:18:24] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-23 04:18:24] 
[2025-07-23 04:18:24] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-23 04:18:24] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-23 04:18:24] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-23 04:18:24] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-23 04:18:24] 
[2025-07-23 04:18:24] 2025-07-23 11:17:54,708 | INFO     | ***************************************
[2025-07-23 04:18:24] 2025-07-23 11:17:55,211 | INFO     | executing command: df -mP /home/boinc/slots/0
[2025-07-23 04:18:24] 2025-07-23 11:17:55,229 | INFO     | sufficient remaining disk space (1879528439808 B)
[2025-07-23 04:18:24] 2025-07-23 11:17:55,229 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-23 04:18:24] 2025-07-23 11:17:55,229 | INFO     | current server update state: UPDATING_FINAL
[2025-07-23 04:18:24] 2025-07-23 11:17:55,229 | INFO     | update_server=False
[2025-07-23 04:18:24] 2025-07-23 11:17:55,229 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-23 04:18:24] 2025-07-23 11:17:55,230 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-23 04:18:24] 2025-07-23 11:17:55,230 | INFO     | aborting loop
[2025-07-23 04:18:24] 2025-07-23 11:17:55,369 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-23 04:18:24] 2025-07-23 11:17:55,537 | INFO     | all data control threads have been joined
[2025-07-23 04:18:24] 2025-07-23 11:17:56,035 | INFO     | all payload control threads have been joined
[2025-07-23 04:18:24] 2025-07-23 11:17:56,235 | INFO     | [job] retrieve thread has finished
[2025-07-23 04:18:24] 2025-07-23 11:17:56,236 | INFO     | [job] job monitor thread has finished
[2025-07-23 04:18:24] 2025-07-23 11:17:56,418 | INFO     | [payload] failed_post thread has finished
[2025-07-23 04:18:24] 2025-07-23 11:17:56,502 | INFO     | [data] copytool_in thread has finished
[2025-07-23 04:18:24] 2025-07-23 11:17:56,523 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-23 04:18:24] 2025-07-23 11:17:56,543 | INFO     | [data] control thread has finished
[2025-07-23 04:18:24] 2025-07-23 11:17:56,624 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-23 04:18:24] 2025-07-23 11:17:56,661 | INFO     | all job control threads have been joined
[2025-07-23 04:18:24] 2025-07-23 11:17:56,781 | INFO     | [payload] validate_post thread has finished
[2025-07-23 04:18:24] 2025-07-23 11:17:56,833 | INFO     | [payload] validate_pre thread has finished
[2025-07-23 04:18:24] 2025-07-23 11:17:56,834 | INFO     | [job] validate thread has finished
[2025-07-23 04:18:24] 2025-07-23 11:17:57,041 | INFO     | [payload] control thread has finished
[2025-07-23 04:18:24] 2025-07-23 11:17:57,189 | INFO     | [job] create_data_payload thread has finished
[2025-07-23 04:18:24] 2025-07-23 11:17:57,275 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-23 04:18:24] 2025-07-23 11:17:57,521 | INFO     | [payload] execute_payloads thread has finished
[2025-07-23 04:18:24] 2025-07-23 11:17:57,667 | INFO     | [job] control thread has finished
[2025-07-23 04:18:24] 2025-07-23 11:17:58,293 | INFO     | [job] queue monitor thread has finished
[2025-07-23 04:18:24] 2025-07-23 11:17:58,632 | INFO     | [data] copytool_out thread has finished
[2025-07-23 04:18:24] 2025-07-23 11:17:59,378 | INFO     | [data] queue_monitor thread has finished
[2025-07-23 04:18:24] 2025-07-23 11:18:00,916 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140124703725376)>', '<ExcThread(monitor, started 140123576465152)>']
[2025-07-23 04:18:24] 2025-07-23 11:18:05,942 | INFO     | all workflow threads have been joined
[2025-07-23 04:18:24] 2025-07-23 11:18:05,942 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-23 04:18:24] 2025-07-23 11:18:05,943 | INFO     | traces error code: 0
[2025-07-23 04:18:24] 2025-07-23 11:18:05,943 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-23 04:18:24] 2025-07-23 11:18:23,766 | INFO     | PID=1061999 has CPU usage=1.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-07-23 04:18:24] 2025-07-23 11:18:23,766 | INFO     | .. there are 28 such processes running
[2025-07-23 04:18:24] 2025-07-23 11:18:23,766 | INFO     | found 0 job(s) in 20 queues
[2025-07-23 04:18:24] 2025-07-23 11:18:23,766 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-23 04:18:24] 2025-07-23 11:18:23,766 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-23 04:18:24] 2025-07-23 11:18:23,766 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-23 04:18:24] 2025-07-23 11:18:23,766 | INFO     | [monitor] control thread has ended
[2025-07-23 04:18:24] 2025-07-23 11:18:24,060 [wrapper] ==== pilot stdout END ====
[2025-07-23 04:18:24] 2025-07-23 11:18:24,076 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-23 04:18:24] 2025-07-23 11:18:24,088 [wrapper] pilotpid: 1061999
[2025-07-23 04:18:24] 2025-07-23 11:18:24,092 [wrapper] Pilot exit status: 0
[2025-07-23 04:18:24] 2025-07-23 11:18:24,117 [wrapper] pandaids: 6741883461
[2025-07-23 04:18:24] 2025-07-23 11:18:24,194 [wrapper] cleanup supervisor_pilot 1062005 1062000
[2025-07-23 04:18:24] 2025-07-23 11:18:24,197 [wrapper] Test setup, not cleaning
[2025-07-23 04:18:24] 2025-07-23 11:18:24,199 [wrapper] apfmon messages muted
[2025-07-23 04:18:24] 2025-07-23 11:18:24,206 [wrapper] ==== wrapper stdout END ====
[2025-07-23 04:18:24] 2025-07-23 11:18:24,208 [wrapper] ==== wrapper stderr END ====
[2025-07-23 04:18:24]  *** Error codes and diagnostics ***
[2025-07-23 04:18:24]     "exeErrorCode": 65,
[2025-07-23 04:18:24]     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (1)",
[2025-07-23 04:18:24]     "pilotErrorCode": 1305,
[2025-07-23 04:18:24]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (1)",
[2025-07-23 04:18:24]  *** Listing of results directory ***
[2025-07-23 04:18:24] total 327260
[2025-07-23 04:18:24] -rw-r--r--. 1 boinc boinc    530466 Jul 23 00:18 pilot3.tar.gz
[2025-07-23 04:18:24] -rw-r--r--. 1 boinc boinc      5112 Jul 23 00:18 queuedata.json
[2025-07-23 04:18:24] -rwx------. 1 boinc boinc     36292 Jul 23 00:20 runpilot2-wrapper.sh
[2025-07-23 04:18:24] -rw-r--r--. 1 boinc boinc       100 Jul 23 04:12 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-23 04:18:24] -rwxr-xr-x. 1 boinc boinc      7986 Jul 23 04:12 run_atlas
[2025-07-23 04:18:24] -rw-r--r--. 1 boinc boinc       105 Jul 23 04:12 job.xml
[2025-07-23 04:18:24] -rw-r--r--. 1 boinc boinc      6591 Jul 23 04:12 init_data.xml
[2025-07-23 04:18:24] -rw-r--r--. 2 boinc boinc 331040746 Jul 23 04:12 EVNT.45697470._000179.pool.root.1
[2025-07-23 04:18:24] -rw-r--r--. 2 boinc boinc     15095 Jul 23 04:12 start_atlas.sh
[2025-07-23 04:18:24] drwxrwx--x. 2 boinc boinc      4096 Jul 23 04:12 shared
[2025-07-23 04:18:24] -rw-r--r--. 2 boinc boinc    542904 Jul 23 04:12 input.tar.gz
[2025-07-23 04:18:24] -rw-r--r--. 1 boinc boinc         0 Jul 23 04:12 boinc_lockfile
[2025-07-23 04:18:24] -rw-r--r--. 1 boinc boinc      2611 Jul 23 04:13 pandaJob.out
[2025-07-23 04:18:24] -rw-------. 1 boinc boinc    978437 Jul 23 04:13 agis_schedconf.cvmfs.json
[2025-07-23 04:18:24] -rw-------. 1 boinc boinc   1593041 Jul 23 04:13 agis_ddmendpoints.agis.ALL.json
[2025-07-23 04:18:24] drwx------. 4 boinc boinc      4096 Jul 23 04:13 pilot3
[2025-07-23 04:18:24] -rw-r--r--. 1 boinc boinc       523 Jul 23 04:15 boinc_task_state.xml
[2025-07-23 04:18:24] -rw-------. 1 boinc boinc       964 Jul 23 04:15 memory_monitor_summary.json
[2025-07-23 04:18:24] -rw-------. 1 boinc boinc     21572 Jul 23 04:15 log.45697472._003894.job.log.tgz.1
[2025-07-23 04:18:24] -rw-------. 1 boinc boinc        95 Jul 23 04:17 pilot_heartbeat.json
[2025-07-23 04:18:24] -rw-------. 1 boinc boinc      8391 Jul 23 04:17 heartbeat.json
[2025-07-23 04:18:24] -rw-r--r--. 1 boinc boinc      8192 Jul 23 04:18 boinc_mmap_file
[2025-07-23 04:18:24] -rw-r--r--. 1 boinc boinc        22 Jul 23 04:18 wrapper_checkpoint.txt
[2025-07-23 04:18:24] -rw-------. 1 boinc boinc       823 Jul 23 04:18 pilotlog.txt
[2025-07-23 04:18:24] -rw-------. 1 boinc boinc     80803 Jul 23 04:18 log.45697472._003894.job.log.1
[2025-07-23 04:18:24] -rw-------. 1 boinc boinc       188 Jul 23 04:18 output.list
[2025-07-23 04:18:24] -rw-r--r--. 1 boinc boinc       620 Jul 23 04:18 runtime_log
[2025-07-23 04:18:24] -rw-------. 1 boinc boinc    122880 Jul 23 04:18 result.tar.gz
[2025-07-23 04:18:24] -rw-r--r--. 1 boinc boinc      8485 Jul 23 04:18 runtime_log.err
[2025-07-23 04:18:24] -rw-------. 1 boinc boinc       645 Jul 23 04:18 i4DNDm4wiy7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmtALLDmv338Sn.diag
[2025-07-23 04:18:24] -rw-r--r--. 1 boinc boinc     21370 Jul 23 04:18 stderr.txt
[2025-07-23 04:18:24] No HITS result produced
[2025-07-23 04:18:24]  *** Contents of shared directory: ***
[2025-07-23 04:18:24] total 323952
[2025-07-23 04:18:24] -rw-r--r--. 2 boinc boinc 331040746 Jul 23 04:12 ATLAS.root_0
[2025-07-23 04:18:24] -rw-r--r--. 2 boinc boinc     15095 Jul 23 04:12 start_atlas.sh
[2025-07-23 04:18:24] -rw-r--r--. 2 boinc boinc    542904 Jul 23 04:12 input.tar.gz
[2025-07-23 04:18:24] -rw-------. 1 boinc boinc    122880 Jul 23 04:18 result.tar.gz
04:18:26 (1058399): run_atlas exited; CPU time 29.852980
04:18:26 (1058399): called boinc_finish(0)

</stderr_txt>
]]>

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