Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
07:07:00 (24516): wrapper (7.7.26015): starting
07:07:00 (24516): wrapper: running run_atlas (--nthreads 8)
[2025-07-23 07:07:00] Arguments: --nthreads 8
[2025-07-23 07:07:00] Threads: 8
[2025-07-23 07:07:00] Checking for CVMFS
[2025-07-23 07:07:01] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-23 07:07:01] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-23 07:07:01] Running cvmfs_config stat atlas.cern.ch
[2025-07-23 07:07:04] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-23 07:07:04] 2.11.2.0 5069 39893 382444 148655 1 187 13688791 18432001 13752 130560 0 99825349 99.415 144522425 67701 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-07-23 07:07:04] CVMFS is ok
[2025-07-23 07:07:04] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-07-23 07:07:04] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-07-23 07:07:04] Further information can be found at the LHC@home message board.
[2025-07-23 07:07:04] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-23 07:07:04] Checking for apptainer binary...
[2025-07-23 07:07:04] Using apptainer found in PATH at /usr/bin/apptainer
[2025-07-23 07:07:04] Running /usr/bin/apptainer --version
[2025-07-23 07:07:04] apptainer version 1.3.2-1.el7
[2025-07-23 07:07:04] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-23 07:07:09] c-210-41.aglt2.org
[2025-07-23 07:07:09] apptainer works
[2025-07-23 07:07:10] Set ATHENA_PROC_NUMBER=8
[2025-07-23 07:07:10] Set ATHENA_CORE_NUMBER=8
[2025-07-23 07:07:10] Starting ATLAS job with PandaID=6741854550
[2025-07-23 07:07:10] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
10:47:00 (11597): wrapper (7.7.26015): starting
10:47:00 (11597): wrapper: running run_atlas (--nthreads 8)
[2025-07-23 10:47:00] Arguments: --nthreads 8
[2025-07-23 10:47:00] Threads: 8
[2025-07-23 10:47:00] This job has been restarted, cleaning up previous attempt
[2025-07-23 10:47:00] Checking for CVMFS
[2025-07-23 10:47:00] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-23 10:47:01] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-23 10:47:01] Running cvmfs_config stat atlas.cern.ch
[2025-07-23 10:47:01] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-23 10:47:01] 2.11.2.0 5069 40113 408636 148661 3 512 14855469 18432000 9882 130560 0 100117935 99.421 144930589 67642 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-07-23 10:47:01] CVMFS is ok
[2025-07-23 10:47:01] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-07-23 10:47:01] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-07-23 10:47:01] Further information can be found at the LHC@home message board.
[2025-07-23 10:47:01] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-23 10:47:01] Checking for apptainer binary...
[2025-07-23 10:47:01] Using apptainer found in PATH at /usr/bin/apptainer
[2025-07-23 10:47:01] Running /usr/bin/apptainer --version
[2025-07-23 10:47:01] apptainer version 1.3.2-1.el7
[2025-07-23 10:47:01] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-23 10:47:02] c-210-41.aglt2.org
[2025-07-23 10:47:02] apptainer works
[2025-07-23 10:47:03] Set ATHENA_PROC_NUMBER=8
[2025-07-23 10:47:03] Set ATHENA_CORE_NUMBER=8
[2025-07-23 10:47:03] Starting ATLAS job with PandaID=6741854550
[2025-07-23 10:47:03] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-23 20:02:17]  *** The last 200 lines of the pilot log: ***
[2025-07-23 20:02:17] 2025-07-24 00:01:45,241 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-23 20:02:17] 2025-07-24 00:01:45,242 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-23 20:02:17] 2025-07-24 00:01:45,242 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-23 20:02:17] 2025-07-24 00:01:45,255 | INFO     | fitting pss+swap vs Time
[2025-07-23 20:02:17] 2025-07-24 00:01:45,256 | INFO     | sum of square deviations: 50195035264.31204
[2025-07-23 20:02:17] 2025-07-24 00:01:45,266 | INFO     | sum of deviations: 102936734909.55971
[2025-07-23 20:02:17] 2025-07-24 00:01:45,266 | INFO     | mean x: 1753298667.559633
[2025-07-23 20:02:17] 2025-07-24 00:01:45,270 | INFO     | mean y: 2545832.3981651375
[2025-07-23 20:02:17] 2025-07-24 00:01:45,270 | INFO     | -- intersect: -3593005783.6037483
[2025-07-23 20:02:17] 2025-07-24 00:01:45,270 | INFO     | intersect: -3593005783.6037483
[2025-07-23 20:02:17] 2025-07-24 00:01:45,271 | INFO     | chi2: 2.6098832780641352
[2025-07-23 20:02:17] 2025-07-24 00:01:45,272 | INFO     | sum of square deviations: 48826228202.731606
[2025-07-23 20:02:17] 2025-07-24 00:01:45,281 | INFO     | sum of deviations: 139444472799.85184
[2025-07-23 20:02:17] 2025-07-24 00:01:45,281 | INFO     | mean x: 1753298515.0648148
[2025-07-23 20:02:17] 2025-07-24 00:01:45,282 | INFO     | mean y: 2549867.7185185184
[2025-07-23 20:02:17] 2025-07-24 00:01:45,282 | INFO     | -- intersect: -5004754527.755924
[2025-07-23 20:02:17] 2025-07-24 00:01:45,282 | INFO     | intersect: -5004754527.755924
[2025-07-23 20:02:17] 2025-07-24 00:01:45,282 | INFO     | chi2: 1.7813471706651658
[2025-07-23 20:02:17] 2025-07-24 00:01:45,282 | INFO     | current chi2=1.7813471706651658 (change=31.74609816319184 %)
[2025-07-23 20:02:17] 2025-07-24 00:01:45,287 | INFO     | sum of square deviations: 47482537891.12138
[2025-07-23 20:02:17] 2025-07-24 00:01:45,300 | INFO     | sum of deviations: 137172718235.81319
[2025-07-23 20:02:17] 2025-07-24 00:01:45,301 | INFO     | mean x: 1753298362.5700934
[2025-07-23 20:02:17] 2025-07-24 00:01:45,301 | INFO     | mean y: 2549609.938317757
[2025-07-23 20:02:17] 2025-07-24 00:01:45,301 | INFO     | -- intersect: -5062569335.970244
[2025-07-23 20:02:17] 2025-07-24 00:01:45,301 | INFO     | intersect: -5062569335.970244
[2025-07-23 20:02:17] 2025-07-24 00:01:45,301 | INFO     | chi2: 1.7815411558579297
[2025-07-23 20:02:17] 2025-07-24 00:01:45,301 | INFO     | current chi2=1.7815411558579297 (change=-0.010889802726746877 %)
[2025-07-23 20:02:17] 2025-07-24 00:01:45,302 | INFO     | right removable region: 534
[2025-07-23 20:02:17] 2025-07-24 00:01:45,302 | INFO     | sum of square deviations: 48826042152.73162
[2025-07-23 20:02:17] 2025-07-24 00:01:45,312 | INFO     | sum of deviations: -5867345635.324074
[2025-07-23 20:02:17] 2025-07-24 00:01:45,312 | INFO     | mean x: 1753298820.0648148
[2025-07-23 20:02:17] 2025-07-24 00:01:45,312 | INFO     | mean y: 2557921.6092592594
[2025-07-23 20:02:17] 2025-07-24 00:01:45,312 | INFO     | -- intersect: 213248973.46939066
[2025-07-23 20:02:17] 2025-07-24 00:01:45,315 | INFO     | intersect: 213248973.46939066
[2025-07-23 20:02:17] 2025-07-24 00:01:45,316 | INFO     | chi2: 0.8845616692441639
[2025-07-23 20:02:17] 2025-07-24 00:01:45,316 | INFO     | current chi2=0.8845616692441639 (change=66.10723258473529 %)
[2025-07-23 20:02:17] 2025-07-24 00:01:45,316 | INFO     | sum of square deviations: 47482165791.121414
[2025-07-23 20:02:17] 2025-07-24 00:01:45,322 | INFO     | sum of deviations: -18728136481.803745
[2025-07-23 20:02:17] 2025-07-24 00:01:45,323 | INFO     | mean x: 1753298972.5700934
[2025-07-23 20:02:17] 2025-07-24 00:01:45,323 | INFO     | mean y: 2559373.674766355
[2025-07-23 20:02:17] 2025-07-24 00:01:45,323 | INFO     | -- intersect: 694103702.0473976
[2025-07-23 20:02:17] 2025-07-24 00:01:45,323 | INFO     | intersect: 694103702.0473976
[2025-07-23 20:02:17] 2025-07-24 00:01:45,323 | INFO     | chi2: 0.8446720346589351
[2025-07-23 20:02:17] 2025-07-24 00:01:45,324 | INFO     | current chi2=0.8446720346589351 (change=4.509536866922288 %)
[2025-07-23 20:02:17] 2025-07-24 00:01:45,324 | INFO     | left removable region: 20
[2025-07-23 20:02:17] 2025-07-24 00:01:45,324 | INFO     | sum of square deviations: 42107320821.51754
[2025-07-23 20:02:17] 2025-07-24 00:01:45,330 | INFO     | sum of deviations: 22048629898.45135
[2025-07-23 20:02:17] 2025-07-24 00:01:45,330 | INFO     | mean x: 1753298942.0933852
[2025-07-23 20:02:17] 2025-07-24 00:01:45,330 | INFO     | mean y: 2562827.0739299613
[2025-07-23 20:02:17] 2025-07-24 00:01:45,330 | INFO     | -- intersect: -915515994.407596
[2025-07-23 20:02:17] 2025-07-24 00:01:45,330 | INFO     | intersect: -915515994.407596
[2025-07-23 20:02:17] 2025-07-24 00:01:45,331 | INFO     | chi2: 0.0031411563254031293
[2025-07-23 20:02:17] 2025-07-24 00:01:45,331 | INFO     | -- intersect: -915515994.407596
[2025-07-23 20:02:17] 2025-07-24 00:01:45,331 | INFO     | current memory leak: 0.52 B/s (using 514 data points, chi2=0.00)
[2025-07-23 20:02:17] 2025-07-24 00:01:45,333 | INFO     | could have reported an average CPU frequency of 2994 MHz (21 samples)
[2025-07-23 20:02:17] 2025-07-24 00:01:45,333 | INFO     | ..............................
[2025-07-23 20:02:17] 2025-07-24 00:01:45,333 | INFO     | . Timing measurements:
[2025-07-23 20:02:17] 2025-07-24 00:01:45,333 | INFO     | . get job = 0 s
[2025-07-23 20:02:17] 2025-07-24 00:01:45,333 | INFO     | . initial setup = 2 s
[2025-07-23 20:02:17] 2025-07-24 00:01:45,333 | INFO     | . payload setup = 9 s
[2025-07-23 20:02:17] 2025-07-24 00:01:45,333 | INFO     | . stage-in = 0 s
[2025-07-23 20:02:17] 2025-07-24 00:01:45,333 | INFO     | . payload execution = 33214 s
[2025-07-23 20:02:17] 2025-07-24 00:01:45,333 | INFO     | . stage-out = 2 s
[2025-07-23 20:02:17] 2025-07-24 00:01:45,333 | INFO     | . log creation = 0 s
[2025-07-23 20:02:17] 2025-07-24 00:01:45,334 | INFO     | ..............................
[2025-07-23 20:02:17] 2025-07-24 00:01:45,420 | INFO     | 
[2025-07-23 20:02:17] 2025-07-24 00:01:45,420 | INFO     | job summary report
[2025-07-23 20:02:17] 2025-07-24 00:01:45,420 | INFO     | --------------------------------------------------
[2025-07-23 20:02:17] 2025-07-24 00:01:45,420 | INFO     | PanDA job id: 6741854550
[2025-07-23 20:02:17] 2025-07-24 00:01:45,420 | INFO     | task id: 45697490
[2025-07-23 20:02:17] 2025-07-24 00:01:45,420 | INFO     | errors: (none)
[2025-07-23 20:02:17] 2025-07-24 00:01:45,420 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-23 20:02:17] 2025-07-24 00:01:45,420 | INFO     | pilot state: finished 
[2025-07-23 20:02:17] 2025-07-24 00:01:45,420 | INFO     | transexitcode: 0
[2025-07-23 20:02:17] 2025-07-24 00:01:45,420 | INFO     | exeerrorcode: 0
[2025-07-23 20:02:17] 2025-07-24 00:01:45,420 | INFO     | exeerrordiag: 
[2025-07-23 20:02:17] 2025-07-24 00:01:45,420 | INFO     | exitcode: 0
[2025-07-23 20:02:17] 2025-07-24 00:01:45,420 | INFO     | exitmsg: OK
[2025-07-23 20:02:17] 2025-07-24 00:01:45,420 | INFO     | cpuconsumptiontime: 59130 s
[2025-07-23 20:02:17] 2025-07-24 00:01:45,421 | INFO     | nevents: 400
[2025-07-23 20:02:17] 2025-07-24 00:01:45,421 | INFO     | neventsw: 0
[2025-07-23 20:02:17] 2025-07-24 00:01:45,421 | INFO     | pid: 15399
[2025-07-23 20:02:17] 2025-07-24 00:01:45,421 | INFO     | pgrp: 15399
[2025-07-23 20:02:17] 2025-07-24 00:01:45,421 | INFO     | corecount: 8
[2025-07-23 20:02:17] 2025-07-24 00:01:45,421 | INFO     | event service: False
[2025-07-23 20:02:17] 2025-07-24 00:01:45,421 | INFO     | sizes: {0: 2397450, 6: 2397712, 11: 2397740, 33228: 2437506, 33231: 2446560, 33252: 2446698}
[2025-07-23 20:02:17] 2025-07-24 00:01:45,421 | INFO     | --------------------------------------------------
[2025-07-23 20:02:17] 2025-07-24 00:01:45,421 | INFO     | 
[2025-07-23 20:02:17] 2025-07-24 00:01:45,421 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-07-23 20:02:17] 2025-07-24 00:01:45,463 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-23 20:02:17] 2025-07-24 00:01:45,463 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-23 20:02:17] 2025-07-24 00:01:45,463 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-23 20:02:17] 2025-07-24 00:01:45,463 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-23 20:02:17] 2025-07-24 00:01:45,463 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-23 20:02:17] 2025-07-24 00:01:45,463 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-23 20:02:17] 2025-07-24 00:01:45,463 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-23 20:02:17] 2025-07-24 00:01:45,463 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-23 20:02:17] 2025-07-24 00:01:45,463 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-23 20:02:17] 2025-07-24 00:01:45,464 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-23 20:02:17] 2025-07-24 00:01:45,464 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-23 20:02:17] 2025-07-24 00:01:45,464 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-23 20:02:17] 2025-07-24 00:01:45,464 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-23 20:02:17] 2025-07-24 00:01:45,464 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-23 20:02:17] 2025-07-24 00:01:45,464 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-23 20:02:17] 2025-07-24 00:01:45,464 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-23 20:02:17] 2025-07-24 00:01:45,464 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-23 20:02:17] 2025-07-24 00:01:45,464 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-23 20:02:17] 2025-07-24 00:01:45,464 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-23 20:02:17] 2025-07-24 00:01:45,464 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-23 20:02:17] 2025-07-24 00:01:45,464 | INFO     | job 6741854550 has completed (purged errors)
[2025-07-23 20:02:17] 2025-07-24 00:01:45,465 | INFO     | overall cleanup function is called
[2025-07-23 20:02:17] 2025-07-24 00:01:46,471 | INFO     | --- collectZombieJob: --- 10, [15399]
[2025-07-23 20:02:17] 2025-07-24 00:01:46,472 | INFO     | zombie collector waiting for pid 15399
[2025-07-23 20:02:17] 2025-07-24 00:01:46,472 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-23 20:02:17] 2025-07-24 00:01:46,472 | INFO     | collected zombie processes
[2025-07-23 20:02:17] 2025-07-24 00:01:46,472 | INFO     | will attempt to kill all subprocesses of pid=15399
[2025-07-23 20:02:17] 2025-07-24 00:01:46,833 | INFO     | process IDs to be killed: [15399] (in reverse order)
[2025-07-23 20:02:17] 2025-07-24 00:01:46,982 | WARNING  | found no corresponding commands to process id(s)
[2025-07-23 20:02:17] 2025-07-24 00:01:46,982 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-23 20:02:17] 2025-07-24 00:01:46,988 | INFO     | did not find any defunct processes belonging to 15399
[2025-07-23 20:02:17] 2025-07-24 00:01:46,994 | INFO     | did not find any defunct processes belonging to 15399
[2025-07-23 20:02:17] 2025-07-24 00:01:46,994 | INFO     | ready for new job
[2025-07-23 20:02:17] 2025-07-24 00:01:46,994 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-23 20:02:17] 2025-07-24 00:01:46,997 | INFO     | ***************************************
[2025-07-23 20:02:17] 2025-07-24 00:01:46,997 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-23 20:02:17] 2025-07-24 00:01:46,997 | INFO     | ***************************************
[2025-07-23 20:02:17] 2025-07-24 00:01:46,997 | INFO     | 
[2025-07-23 20:02:17] 2025-07-24 00:01:47,000 | INFO     | architecture information:
[2025-07-23 20:02:17] 2025-07-24 00:01:47,000 | INFO     | executing command: cat /etc/os-release
[2025-07-23 20:02:17] 2025-07-24 00:01:47,122 | INFO     | cat /etc/os-release:
[2025-07-23 20:02:17] NAME="CentOS Linux"
[2025-07-23 20:02:17] VERSION="7 (Core)"
[2025-07-23 20:02:17] ID="centos"
[2025-07-23 20:02:17] ID_LIKE="rhel fedora"
[2025-07-23 20:02:17] VERSION_ID="7"
[2025-07-23 20:02:17] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-23 20:02:17] ANSI_COLOR="0;31"
[2025-07-23 20:02:17] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-23 20:02:17] HOME_URL="https://www.centos.org/"
[2025-07-23 20:02:17] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-23 20:02:17] 
[2025-07-23 20:02:17] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-23 20:02:17] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-23 20:02:17] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-23 20:02:17] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-23 20:02:17] 
[2025-07-23 20:02:17] 2025-07-24 00:01:47,122 | INFO     | ***************************************
[2025-07-23 20:02:17] 2025-07-24 00:01:47,633 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-07-23 20:02:17] 2025-07-24 00:01:47,673 | INFO     | sufficient remaining disk space (71356645376 B)
[2025-07-23 20:02:17] 2025-07-24 00:01:47,673 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-23 20:02:17] 2025-07-24 00:01:47,673 | INFO     | current server update state: UPDATING_FINAL
[2025-07-23 20:02:17] 2025-07-24 00:01:47,674 | INFO     | update_server=False
[2025-07-23 20:02:17] 2025-07-24 00:01:47,674 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-23 20:02:17] 2025-07-24 00:01:47,674 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-23 20:02:17] 2025-07-24 00:01:48,018 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-23 20:02:17] 2025-07-24 00:01:48,019 | INFO     | aborting loop
[2025-07-23 20:02:17] 2025-07-24 00:01:48,223 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-23 20:02:17] 2025-07-24 00:01:48,327 | INFO     | all payload control threads have been joined
[2025-07-23 20:02:17] 2025-07-24 00:01:48,558 | INFO     | all job control threads have been joined
[2025-07-23 20:02:17] 2025-07-24 00:01:48,654 | INFO     | all data control threads have been joined
[2025-07-23 20:02:17] 2025-07-24 00:01:48,680 | INFO     | [job] retrieve thread has finished
[2025-07-23 20:02:17] 2025-07-24 00:01:49,024 | INFO     | [job] job monitor thread has finished
[2025-07-23 20:02:17] 2025-07-24 00:01:49,073 | INFO     | [payload] execute_payloads thread has finished
[2025-07-23 20:02:17] 2025-07-24 00:01:49,150 | INFO     | [job] create_data_payload thread has finished
[2025-07-23 20:02:17] 2025-07-24 00:01:49,224 | INFO     | [payload] failed_post thread has finished
[2025-07-23 20:02:17] 2025-07-24 00:01:49,233 | INFO     | [data] copytool_in thread has finished
[2025-07-23 20:02:17] 2025-07-24 00:01:49,334 | INFO     | [payload] control thread has finished
[2025-07-23 20:02:17] 2025-07-24 00:01:49,410 | INFO     | [payload] validate_post thread has finished
[2025-07-23 20:02:17] 2025-07-24 00:01:49,564 | INFO     | [job] control thread has finished
[2025-07-23 20:02:17] 2025-07-24 00:01:49,566 | INFO     | [job] validate thread has finished
[2025-07-23 20:02:17] 2025-07-24 00:01:49,660 | INFO     | [data] control thread has finished
[2025-07-23 20:02:17] 2025-07-24 00:01:49,680 | INFO     | [data] copytool_out thread has finished
[2025-07-23 20:02:17] 2025-07-24 00:01:50,054 | INFO     | [payload] validate_pre thread has finished
[2025-07-23 20:02:17] 2025-07-24 00:01:50,433 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-23 20:02:17] 2025-07-24 00:01:51,439 | INFO     | [job] queue monitor thread has finished
[2025-07-23 20:02:17] 2025-07-24 00:01:52,232 | INFO     | [data] queue_monitor thread has finished
[2025-07-23 20:02:17] 2025-07-24 00:01:58,365 | INFO     | job.realtimelogging is not enabled
[2025-07-23 20:02:17] 2025-07-24 00:01:59,371 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-23 20:02:17] 2025-07-24 00:02:01,105 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140257650067264)>', '<ExcThread(monitor, started 140257349576448)>']
[2025-07-23 20:02:17] 2025-07-24 00:02:06,131 | INFO     | all workflow threads have been joined
[2025-07-23 20:02:17] 2025-07-24 00:02:06,132 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-23 20:02:17] 2025-07-24 00:02:06,132 | INFO     | traces error code: 0
[2025-07-23 20:02:17] 2025-07-24 00:02:06,132 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-23 20:02:17] 2025-07-24 00:02:17,323 | INFO     | PID=36332 has CPU usage=1.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-07-23 20:02:17] 2025-07-24 00:02:17,323 | INFO     | .. there are 10 such processes running
[2025-07-23 20:02:17] 2025-07-24 00:02:17,324 | INFO     | found 0 job(s) in 20 queues
[2025-07-23 20:02:17] 2025-07-24 00:02:17,324 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-23 20:02:17] 2025-07-24 00:02:17,324 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-23 20:02:17] 2025-07-24 00:02:17,324 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-23 20:02:17] 2025-07-24 00:02:17,324 | INFO     | [monitor] control thread has ended
[2025-07-23 20:02:17] 2025-07-24 00:02:17,442 [wrapper] ==== pilot stdout END ====
[2025-07-23 20:02:17] 2025-07-24 00:02:17,446 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-23 20:02:17] 2025-07-24 00:02:17,468 [wrapper] pilotpid: 36332
[2025-07-23 20:02:17] 2025-07-24 00:02:17,483 [wrapper] Pilot exit status: 0
[2025-07-23 20:02:17] 2025-07-24 00:02:17,507 [wrapper] pandaids: 6741854550
[2025-07-23 20:02:17] 2025-07-24 00:02:17,580 [wrapper] cleanup supervisor_pilot 30073 36333
[2025-07-23 20:02:17] 2025-07-24 00:02:17,607 [wrapper] Test setup, not cleaning
[2025-07-23 20:02:17] 2025-07-24 00:02:17,639 [wrapper] apfmon messages muted
[2025-07-23 20:02:17] 2025-07-24 00:02:17,644 [wrapper] ==== wrapper stdout END ====
[2025-07-23 20:02:17] 2025-07-24 00:02:17,646 [wrapper] ==== wrapper stderr END ====
[2025-07-23 20:02:17]  *** Error codes and diagnostics ***
[2025-07-23 20:02:17]     "exeErrorCode": 0,
[2025-07-23 20:02:17]     "exeErrorDiag": "",
[2025-07-23 20:02:17]     "pilotErrorCode": 0,
[2025-07-23 20:02:17]     "pilotErrorDiag": "",
[2025-07-23 20:02:17]  *** Listing of results directory ***
[2025-07-23 20:02:17] total 981304
[2025-07-23 20:02:17] -rw-r--r-- 1 boincer umatlas    530466 Jul 22 17:11 pilot3.tar.gz
[2025-07-23 20:02:17] -rw-r--r-- 1 boincer umatlas      5112 Jul 22 17:31 queuedata.json
[2025-07-23 20:02:17] -rwx------ 1 boincer umatlas     36292 Jul 22 17:34 runpilot2-wrapper.sh
[2025-07-23 20:02:17] -rw-r--r-- 1 boincer umatlas       100 Jul 23 07:06 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-23 20:02:17] -rwxr-xr-x 1 boincer umatlas      7986 Jul 23 07:06 run_atlas
[2025-07-23 20:02:17] -rw-r--r-- 1 boincer umatlas       105 Jul 23 07:06 job.xml
[2025-07-23 20:02:17] -rw-r--r-- 3 boincer umatlas 343190841 Jul 23 07:07 EVNT.45697488._000101.pool.root.1
[2025-07-23 20:02:17] -rw-r--r-- 3 boincer umatlas 343190841 Jul 23 07:07 ATLAS.root_0
[2025-07-23 20:02:17] -rw-r--r-- 2 boincer umatlas     15095 Jul 23 07:07 start_atlas.sh
[2025-07-23 20:02:17] drwxrwx--x 2 boincer umatlas      4096 Jul 23 07:07 shared
[2025-07-23 20:02:17] -rw-r--r-- 2 boincer umatlas    542903 Jul 23 07:07 input.tar.gz
[2025-07-23 20:02:17] -rw-r--r-- 1 boincer umatlas         0 Jul 23 07:07 boinc_lockfile
[2025-07-23 20:02:17] -rw------- 1 boincer umatlas    107636 Jul 23 07:10 hs_err_pid2597.log
[2025-07-23 20:02:17] -rw------- 1 boincer umatlas    107591 Jul 23 07:12 hs_err_pid23145.log
[2025-07-23 20:02:17] -rw------- 1 boincer umatlas    107806 Jul 23 07:17 hs_err_pid3551.log
[2025-07-23 20:02:17] -rw------- 1 boincer umatlas    107881 Jul 23 07:23 hs_err_pid14784.log
[2025-07-23 20:02:17] -rw------- 1 boincer umatlas    107916 Jul 23 08:22 hs_err_pid41575.log
[2025-07-23 20:02:17] -rw-r--r-- 1 boincer umatlas      2587 Jul 23 10:47 pandaJob.out
[2025-07-23 20:02:17] -rw------- 1 boincer umatlas    978487 Jul 23 10:47 agis_schedconf.cvmfs.json
[2025-07-23 20:02:17] drwx------ 4 boincer umatlas      4096 Jul 23 10:47 pilot3
[2025-07-23 20:02:17] -rw-r--r-- 1 boincer umatlas      6252 Jul 23 20:00 init_data.xml
[2025-07-23 20:02:17] -rw------- 1 boincer umatlas 307433545 Jul 23 20:00 HITS.45697490._002033.pool.root.1
[2025-07-23 20:02:17] -rw-r--r-- 1 boincer umatlas       532 Jul 23 20:00 boinc_task_state.xml
[2025-07-23 20:02:17] -rw------- 1 boincer umatlas      1073 Jul 23 20:01 memory_monitor_summary.json
[2025-07-23 20:02:17] -rw------- 1 boincer umatlas   1593041 Jul 23 20:01 agis_ddmendpoints.agis.ALL.json
[2025-07-23 20:02:17] -rw------- 1 boincer umatlas    550766 Jul 23 20:01 log.45697490._002033.job.log.tgz.1
[2025-07-23 20:02:17] -rw------- 1 boincer umatlas      7808 Jul 23 20:01 heartbeat.json
[2025-07-23 20:02:17] -rw-r--r-- 1 boincer umatlas      8192 Jul 23 20:02 boinc_mmap_file
[2025-07-23 20:02:17] -rw-r--r-- 1 boincer umatlas        28 Jul 23 20:02 wrapper_checkpoint.txt
[2025-07-23 20:02:17] -rw------- 1 boincer umatlas        95 Jul 23 20:02 pilot_heartbeat.json
[2025-07-23 20:02:17] -rw------- 1 boincer umatlas       821 Jul 23 20:02 pilotlog.txt
[2025-07-23 20:02:17] -rw------- 1 boincer umatlas   2756276 Jul 23 20:02 log.45697490._002033.job.log.1
[2025-07-23 20:02:17] -rw------- 1 boincer umatlas       357 Jul 23 20:02 output.list
[2025-07-23 20:02:17] -rw-r--r-- 1 boincer umatlas       620 Jul 23 20:02 runtime_log
[2025-07-23 20:02:17] -rw------- 1 boincer umatlas   3328000 Jul 23 20:02 result.tar.gz
[2025-07-23 20:02:17] -rw-r--r-- 1 boincer umatlas      8746 Jul 23 20:02 runtime_log.err
[2025-07-23 20:02:17] -rw------- 1 boincer umatlas      1278 Jul 23 20:02 1vFODm5nZy7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmsHKLDm3WHiIo.diag
[2025-07-23 20:02:17] -rw-r--r-- 1 boincer umatlas     23081 Jul 23 20:02 stderr.txt
[2025-07-23 20:02:17] HITS file was successfully produced:
[2025-07-23 20:02:17] -rw------- 1 boincer umatlas 307433545 Jul 23 20:00 shared/HITS.pool.root.1
[2025-07-23 20:02:17]  *** Contents of shared directory: ***
[2025-07-23 20:02:17] total 639184
[2025-07-23 20:02:17] -rw-r--r-- 3 boincer umatlas 343190841 Jul 23 07:07 ATLAS.root_0
[2025-07-23 20:02:17] -rw-r--r-- 2 boincer umatlas     15095 Jul 23 07:07 start_atlas.sh
[2025-07-23 20:02:17] -rw-r--r-- 2 boincer umatlas    542903 Jul 23 07:07 input.tar.gz
[2025-07-23 20:02:17] -rw------- 1 boincer umatlas 307433545 Jul 23 20:00 HITS.pool.root.1
[2025-07-23 20:02:17] -rw------- 1 boincer umatlas   3328000 Jul 23 20:02 result.tar.gz
20:02:19 (11597): run_atlas exited; CPU time 58357.749039
20:02:19 (11597): called boinc_finish(0)

</stderr_txt>
]]>

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