Stderr output

<core_client_version>8.0.2</core_client_version>
<![CDATA[
<stderr_txt>
2025-07-23 15:05:06 (21732): Detected: vboxwrapper 26206
2025-07-23 15:05:06 (21732): Detected: BOINC client v8.0.2
2025-07-23 15:05:06 (21732): Detected: VirtualBox VboxManage Interface (Version: 7.1.6)
2025-07-23 15:05:07 (21732): Successfully copied 'init_data.xml' to the shared directory.
2025-07-23 15:05:07 (21732): Create VM. (boinc_cb3b584c9c4c19e5, slot#0)
2025-07-23 15:05:08 (21732): Setting Memory Size for VM. (4800MB)
2025-07-23 15:05:08 (21732): Setting CPU Count for VM. (8)
2025-07-23 15:05:08 (21732): Setting Chipset Options for VM.
2025-07-23 15:05:08 (21732): Setting Graphics Controller Options for VM.
2025-07-23 15:05:09 (21732): Setting Boot Options for VM.
2025-07-23 15:05:09 (21732): Setting Network Configuration for NAT.
2025-07-23 15:05:09 (21732): Enabling VM Network Access.
2025-07-23 15:05:09 (21732): Disabling USB Support for VM.
2025-07-23 15:05:10 (21732): Disabling COM Port Support for VM.
2025-07-23 15:05:10 (21732): Disabling LPT Port Support for VM.
2025-07-23 15:05:10 (21732): Disabling Audio Support for VM.
2025-07-23 15:05:10 (21732): Disabling Clipboard Support for VM.
2025-07-23 15:05:11 (21732): Disabling Drag and Drop Support for VM.
2025-07-23 15:05:11 (21732): Adding storage controller(s) to VM.
2025-07-23 15:05:11 (21732): Adding virtual disk drive to VM. (ATLAS_vbox_3.01_image.vdi)
2025-07-23 15:05:14 (21732): Adding VirtualBox Guest Additions to VM.
2025-07-23 15:05:14 (21732): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2025-07-23 15:05:14 (21732): forwarding host port 57468 to guest port 80
2025-07-23 15:05:15 (21732): Enabling remote desktop for VM.
2025-07-23 15:05:15 (21732): Enabling shared directory for VM.
2025-07-23 15:05:16 (21732): Starting VM using VBoxManage interface. (boinc_cb3b584c9c4c19e5, slot#0)
2025-07-23 15:05:21 (21732): Successfully started VM. (PID = '21280')
2025-07-23 15:05:21 (21732): Reporting VM Process ID to BOINC.
2025-07-23 15:05:21 (21732): Guest Log: BIOS: VirtualBox 7.1.6
2025-07-23 15:05:21 (21732): Guest Log: CPUID EDX: 0x178bfbff
2025-07-23 15:05:21 (21732): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2025-07-23 15:05:21 (21732): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2025-07-23 15:05:21 (21732): VM state change detected. (old = 'poweredoff', new = 'running')
2025-07-23 15:05:21 (21732): Detected: Web Application Enabled (http://localhost:57468)
2025-07-23 15:05:21 (21732): Detected: Remote Desktop Enabled (localhost:57469)
2025-07-23 15:05:21 (21732): Preference change detected
2025-07-23 15:05:21 (21732): Setting CPU throttle for VM. (100%)
2025-07-23 15:05:21 (21732): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 60 seconds) or (Vbox_job.xml: 900 seconds))
2025-07-23 15:05:23 (21732): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2025-07-23 15:05:23 (21732): Guest Log: BIOS: Booting from Hard Disk...
2025-07-23 15:05:26 (21732): Guest Log: BIOS: KBD: unsupported int 16h function 03
2025-07-23 15:05:26 (21732): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2025-07-23 15:05:26 (21732): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2025-07-23 15:05:26 (21732): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2025-07-23 15:05:26 (21732): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2025-07-23 15:05:26 (21732): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2025-07-23 15:05:26 (21732): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2025-07-23 15:05:26 (21732): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2025-07-23 15:05:26 (21732): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2025-07-23 15:05:26 (21732): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2025-07-23 15:05:26 (21732): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2025-07-23 15:05:26 (21732): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2025-07-23 15:05:26 (21732): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2025-07-23 15:05:26 (21732): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2025-07-23 15:05:26 (21732): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2025-07-23 15:05:26 (21732): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2025-07-23 15:05:26 (21732): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2025-07-23 15:05:26 (21732): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2025-07-23 15:05:26 (21732): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2025-07-23 15:05:26 (21732): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2025-07-23 15:05:26 (21732): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2025-07-23 15:05:26 (21732): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2025-07-23 15:05:26 (21732): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2025-07-23 15:05:26 (21732): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2025-07-23 15:05:26 (21732): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2025-07-23 15:05:26 (21732): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2025-07-23 15:05:26 (21732): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2025-07-23 15:05:26 (21732): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2025-07-23 15:05:26 (21732): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2025-07-23 15:05:26 (21732): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2025-07-23 15:05:26 (21732): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2025-07-23 15:05:26 (21732): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2025-07-23 15:05:33 (21732): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2025-07-23 15:05:33 (21732): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2025-07-23 15:05:38 (21732): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2025-07-23 15:05:38 (21732): Guest Log: 00:00:00.000130 main     Log opened 2025-07-23T15:05:36.980934000Z
2025-07-23 15:05:38 (21732): Guest Log: 00:00:00.000204 main     OS Product: Linux
2025-07-23 15:05:38 (21732): Guest Log: 00:00:00.000232 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2025-07-23 15:05:38 (21732): Guest Log: 00:00:00.000256 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2025-07-23 15:05:38 (21732): Guest Log: 00:00:00.000280 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2025-07-23 15:05:38 (21732): Guest Log: 00:00:00.000281 main     Process ID: 1377
2025-07-23 15:05:38 (21732): Guest Log: 00:00:00.000281 main     Package type: LINUX_64BITS_GENERIC
2025-07-23 15:05:38 (21732): Guest Log: 00:00:00.001701 main     5.2.32 r132073 started. Verbose level = 0
2025-07-23 15:05:38 (21732): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2025-07-23 15:05:38 (21732): Guest Log: [INFO] Mounting shared directory
2025-07-23 15:05:38 (21732): Guest Log: [INFO] Checking for init_data.xml
2025-07-23 15:05:48 (21732): Guest Log: 00:00:10.003524 timesync vgsvcTimeSyncWorker: Radical guest time change: -7 188 660 919 000ns (GuestNow=1 753 275 948 323 188 000 ns GuestLast=1 753 283 136 984 107 000 ns fSetTimeLastLoop=true )
2025-07-23 15:06:52 (21732): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2025-07-23 15:06:52 (21732): Guest Log: [INFO] Detected branch: prod
2025-07-23 15:06:52 (21732): Guest Log: This is the prod version of the ATLAS job wrapper
2025-07-23 15:06:52 (21732): Guest Log: Copying input files
2025-07-23 15:06:54 (21732): Guest Log: Copied input files into RunAtlas.
2025-07-23 15:06:54 (21732): Guest Log: This VM did not configure a local http proxy via BOINC.
2025-07-23 15:06:54 (21732): Guest Log: Small home clusters do not require a local http proxy but it is suggested if
2025-07-23 15:06:54 (21732): Guest Log: more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
2025-07-23 15:06:54 (21732): Guest Log: Further information can be found at the LHC@home message board.
2025-07-23 15:08:34 (21732): Guest Log: Running cvmfs_config stat atlas.cern.ch
2025-07-23 15:08:34 (21732): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2025-07-23 15:08:34 (21732): Guest Log: 2.6.3.0 1677 2 30232 148658 4 1 3117619 4096000 0 65024 0 0 n/a 1 0 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
2025-07-23 15:08:35 (21732): Guest Log: copied the webapp to /var/www
2025-07-23 15:08:35 (21732): Guest Log: ATHENA_PROC_NUMBER=8
2025-07-23 15:08:35 (21732): Guest Log: ATHENA_CORE_NUMBER=8
2025-07-23 15:08:35 (21732): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2025-07-23 15:08:35 (21732): Guest Log:  *** Starting ATLAS job. (PandaID=6743006229 taskID=45697541) ***
2025-07-23 15:17:04 (21732): VM state change detected. (old = 'running', new = 'paused')
2025-07-23 15:17:24 (21732): VM state change detected. (old = 'paused', new = 'running')
2025-07-23 15:22:53 (21732): Guest Log:  *** Job finished ***
2025-07-23 15:22:53 (21732): Guest Log:  *** The last 20 lines of the pilot log: ***
2025-07-23 15:22:53 (21732): Guest Log: 2025-07-23 13:22:07,131 | INFO     | all workflow threads have been joined
2025-07-23 15:22:53 (21732): Guest Log: 2025-07-23 13:22:07,131 | INFO     | end of generic workflow (traces error code: 0)
2025-07-23 15:22:53 (21732): Guest Log: 2025-07-23 13:22:07,131 | INFO     | traces error code: 0
2025-07-23 15:22:53 (21732): Guest Log: 2025-07-23 13:22:07,131 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2025-07-23 15:22:53 (21732): Guest Log: 2025-07-23 13:22:27,643 | INFO     | PID=6142 has CPU usage=0.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -j managed --pilot-user ATLAS --harvester-submit-mode PUSH -w generic --job-type managed --resource-type MCORE -z -t
2025-07-23 15:22:53 (21732): Guest Log: 2025-07-23 13:22:27,643 | INFO     | found 0 job(s) in 20 queues
2025-07-23 15:22:53 (21732): Guest Log: 2025-07-23 13:22:27,643 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
2025-07-23 15:22:53 (21732): Guest Log: 2025-07-23 13:22:27,644 | WARNING  | will wait for a maximum of 300 s for threads to finish
2025-07-23 15:22:53 (21732): Guest Log: 2025-07-23 13:22:27,644 | WARNING  | job_aborted has been set - aborting pilot monitoring
2025-07-23 15:22:53 (21732): Guest Log: 2025-07-23 13:22:27,644 | INFO     | [monitor] control thread has ended
2025-07-23 15:22:53 (21732): Guest Log: 2025-07-23 13:22:27,722 [wrapper] ==== pilot stdout END ====
2025-07-23 15:22:53 (21732): Guest Log: 2025-07-23 13:22:27,727 [wrapper] ==== wrapper stdout RESUME ====
2025-07-23 15:22:53 (21732): Guest Log: 2025-07-23 13:22:27,731 [wrapper] pilotpid: 6142
2025-07-23 15:22:53 (21732): Guest Log: 2025-07-23 13:22:27,736 [wrapper] Pilot exit status: 0
2025-07-23 15:22:53 (21732): Guest Log: 2025-07-23 13:22:27,773 [wrapper] pandaids: 6743006229
2025-07-23 15:22:53 (21732): Guest Log: 2025-07-23 13:22:27,803 [wrapper] cleanup supervisor_pilot  6148 6143
2025-07-23 15:22:53 (21732): Guest Log: 2025-07-23 13:22:27,809 [wrapper] Test setup, not cleaning
2025-07-23 15:22:53 (21732): Guest Log: 2025-07-23 13:22:27,814 [wrapper] apfmon messages muted
2025-07-23 15:22:53 (21732): Guest Log: 2025-07-23 13:22:27,819 [wrapper] ==== wrapper stdout END ====
2025-07-23 15:22:53 (21732): Guest Log: 2025-07-23 13:22:27,823 [wrapper] ==== wrapper stderr END ====
2025-07-23 15:22:53 (21732): Guest Log:  *** Error codes and diagnostics ***
2025-07-23 15:22:53 (21732): Guest Log:     "exeErrorCode": 65,
2025-07-23 15:22:53 (21732): Guest Log:     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (1)",
2025-07-23 15:22:53 (21732): Guest Log:     "pilotErrorCode": 1305,
2025-07-23 15:22:53 (21732): Guest Log:     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (1)",
2025-07-23 15:22:53 (21732): Guest Log:  *** Listing of results directory ***
2025-07-23 15:22:53 (21732): Guest Log: total 3936
2025-07-23 15:22:53 (21732): Guest Log: -rw-r--r--. 1 atlas atlas  530466 Jul 23 02:25 pilot3.tar.gz
2025-07-23 15:22:53 (21732): Guest Log: -rw-r--r--. 1 atlas atlas    5112 Jul 23 02:55 queuedata.json
2025-07-23 15:22:53 (21732): Guest Log: -rwx------. 1 atlas atlas   36292 Jul 23 02:56 runpilot2-wrapper.sh
2025-07-23 15:22:53 (21732): Guest Log: -rwxr-xr-x. 1 atlas atlas    9128 Jul 23 13:06 init_data.xml
2025-07-23 15:22:53 (21732): Guest Log: -rwxr-xr-x. 1 atlas atlas  542902 Jul 23 13:06 input.tar.gz
2025-07-23 15:22:53 (21732): Guest Log: -rwxr-xr-x. 1 atlas atlas   15095 Jul 23 13:06 start_atlas.sh
2025-07-23 15:22:53 (21732): Guest Log: lrwxrwxrwx. 1 atlas atlas      20 Jul 23 13:06 EVNT.45697539._000159.pool.root.1 -> /data/./ATLAS.root_0
2025-07-23 15:22:53 (21732): Guest Log: -rw-r--r--. 1 atlas atlas    2602 Jul 23 13:08 pandaJob.out
2025-07-23 15:22:53 (21732): Guest Log: -rw-------. 1 atlas atlas  978437 Jul 23 13:15 agis_schedconf.cvmfs.json
2025-07-23 15:22:53 (21732): Guest Log: -rw-------. 1 atlas atlas 1593041 Jul 23 13:15 agis_ddmendpoints.agis.ALL.json
2025-07-23 15:22:53 (21732): Guest Log: drwx------. 4 atlas atlas    4096 Jul 23 13:15 pilot3
2025-07-23 15:22:53 (21732): Guest Log: -rw-------. 1 atlas atlas    1005 Jul 23 13:19 memory_monitor_summary.json
2025-07-23 15:22:53 (21732): Guest Log: -rw-------. 1 atlas atlas   21903 Jul 23 13:19 log.45697541._004808.job.log.tgz.1
2025-07-23 15:22:53 (21732): Guest Log: -rw-------. 1 atlas atlas    8426 Jul 23 13:21 heartbeat.json
2025-07-23 15:22:53 (21732): Guest Log: -rw-------. 1 atlas atlas     744 Jul 23 13:22 pilotlog.txt
2025-07-23 15:22:53 (21732): Guest Log: -rw-------. 1 atlas atlas      95 Jul 23 13:22 pilot_heartbeat.json
2025-07-23 15:22:53 (21732): Guest Log: -rw-------. 1 atlas atlas   87981 Jul 23 13:22 log.45697541._004808.job.log.1
2025-07-23 15:22:53 (21732): Guest Log: -rw-------. 1 atlas atlas     188 Jul 23 13:22 output.list
2025-07-23 15:22:53 (21732): Guest Log: -rw-r--r--. 1 atlas atlas     620 Jul 23 13:22 runtime_log
2025-07-23 15:22:53 (21732): Guest Log: -rw-------. 1 atlas atlas  133120 Jul 23 13:22 result.tar.gz
2025-07-23 15:22:53 (21732): Guest Log: -rw-r--r--. 1 atlas atlas    8475 Jul 23 13:22 runtime_log.err
2025-07-23 15:22:53 (21732): Guest Log: -rw-------. 1 atlas atlas     655 Jul 23 13:22 0kKODmFqey7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmDjKLDmTDiJFn.diag
2025-07-23 15:22:53 (21732): Guest Log: Looking for outputfile HITS.45697541._004808.pool.root.1
2025-07-23 15:22:53 (21732): Guest Log: No HITS file was produced
2025-07-23 15:22:53 (21732): Guest Log: Successfully finished the ATLAS job!
2025-07-23 15:22:53 (21732): Guest Log: Copying the results back to the shared directory!
2025-07-23 15:22:53 (21732): Guest Log:  *** Contents of shared directory: ***
2025-07-23 15:22:53 (21732): Guest Log: total 336348
2025-07-23 15:22:53 (21732): Guest Log: -rwxrwxrwx. 1 root root 343710705 Jul 23 13:05 ATLAS.root_0
2025-07-23 15:22:53 (21732): Guest Log: -rwxrwxrwx. 1 root root      9128 Jul 23 13:05 init_data.xml
2025-07-23 15:22:53 (21732): Guest Log: -rwxrwxrwx. 1 root root    542902 Jul 23 10:26 input.tar.gz
2025-07-23 15:22:53 (21732): Guest Log: -rwxrwxrwx. 1 root root    133120 Jul 23  2025 result.tar.gz
2025-07-23 15:22:53 (21732): Guest Log: -rwxrwxrwx. 1 root root     15095 Jul 23 10:26 start_atlas.sh
2025-07-23 15:22:53 (21732): Guest Log:  *** Success! Shutting down the machine. ***
2025-07-23 15:22:53 (21732): VM Completion File Detected.
2025-07-23 15:22:53 (21732): Powering off VM.
2025-07-23 15:22:54 (21732): Successfully stopped VM.
2025-07-23 15:22:54 (21732): Deregistering VM. (boinc_cb3b584c9c4c19e5, slot#0)
2025-07-23 15:22:54 (21732): Removing network bandwidth throttle group from VM.
2025-07-23 15:22:54 (21732): Removing VM from VirtualBox.
15:22:59 (21732): called boinc_finish(0)

</stderr_txt>
]]>

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