Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
18:04:35 (4069529): wrapper (7.7.26015): starting
18:04:35 (4069529): wrapper: running run_atlas (--nthreads 12)
[2025-07-23 18:04:35] Arguments: --nthreads 12
[2025-07-23 18:04:35] Threads: 12
[2025-07-23 18:04:35] Checking for CVMFS
[2025-07-23 18:04:36] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-23 18:04:36] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-23 18:04:36] Running cvmfs_config stat atlas.cern.ch
[2025-07-23 18:04:36] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-23 18:04:36] 2.13.1.0 8995 27321 246608 148664 0 188 36768709 46080000 6356 130560 0 247354601 99.906 62399686 23663 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://[2001:718:401:6025:1:0:2:0]:3128 1
[2025-07-23 18:04:36] CVMFS is ok
[2025-07-23 18:04:36] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-07-23 18:04:36] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-07-23 18:04:36] Further information can be found at the LHC@home message board.
[2025-07-23 18:04:36] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-23 18:04:36] Checking for apptainer binary...
[2025-07-23 18:04:36] Using apptainer found in PATH at /usr/bin/apptainer
[2025-07-23 18:04:36] Running /usr/bin/apptainer --version
[2025-07-23 18:04:36] apptainer version 1.4.1-1.el9
[2025-07-23 18:04:36] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-23 18:04:36] mff2103.farm.particle.cz
[2025-07-23 18:04:36] apptainer works
[2025-07-23 18:04:36] Set ATHENA_PROC_NUMBER=12
[2025-07-23 18:04:36] Set ATHENA_CORE_NUMBER=12
[2025-07-23 18:04:36] Starting ATLAS job with PandaID=6743006104
[2025-07-23 18:04:36] Running command: /usr/bin/apptainer exec -B /cvmfs,/scratch/.boinc/slots/4 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-23 19:35:02]  *** The last 200 lines of the pilot log: ***
[2025-07-23 19:35:02]  mtime=0
[2025-07-23 19:35:02]  protocol_id=None
[2025-07-23 19:35:02]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-07-23 19:35:02]  replicas=None
[2025-07-23 19:35:02]  scope=mc23_13p6TeV
[2025-07-23 19:35:02]  status=None
[2025-07-23 19:35:02]  status_code=0
[2025-07-23 19:35:02]  storage_token=
[2025-07-23 19:35:02]  surl=/scratch/.boinc/slots/4/PanDA_Pilot-6743006104/log.45697541._004683.job.log.tgz.1
[2025-07-23 19:35:02]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/7d/7d/log.45697541._004683.job.log.tgz.1
[2025-07-23 19:35:02]  workdir=None
[2025-07-23 19:35:02] ]
[2025-07-23 19:35:02] 2025-07-23 17:34:23,350 | INFO     | transferring file log.45697541._004683.job.log.tgz.1 from /scratch/.boinc/slots/4/PanDA_Pilot-6743006104/log.45697541._004683.job.log.tgz.1 to /scratch/.boinc/slot
[2025-07-23 19:35:02] 2025-07-23 17:34:23,351 | INFO     | executing command: /usr/bin/env mv /scratch/.boinc/slots/4/PanDA_Pilot-6743006104/log.45697541._004683.job.log.tgz.1 /scratch/.boinc/slots/4/log.45697541._004683.j
[2025-07-23 19:35:02] 2025-07-23 17:34:23,372 | INFO     | adding to output.list: log.45697541._004683.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/7d/7d/log.45697541._004683.job.log.tg
[2025-07-23 19:35:02] 2025-07-23 17:34:23,373 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-07-23 19:35:02] 2025-07-23 17:34:23,373 | INFO     | summary of transferred files:
[2025-07-23 19:35:02] 2025-07-23 17:34:23,373 | INFO     |  -- lfn=log.45697541._004683.job.log.tgz.1, status_code=0, status=transferred
[2025-07-23 19:35:02] 2025-07-23 17:34:23,373 | INFO     | stage-out finished correctly
[2025-07-23 19:35:02] 2025-07-23 17:34:24,857 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-07-23 19:35:02] 2025-07-23 17:34:24,954 | INFO     | job 6743006104 has state=finished
[2025-07-23 19:35:02] 2025-07-23 17:34:24,955 | INFO     | preparing for final server update for job 6743006104 in state='finished'
[2025-07-23 19:35:02] 2025-07-23 17:34:24,955 | INFO     | this job has now completed (state=finished)
[2025-07-23 19:35:02] 2025-07-23 17:34:24,956 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-07-23 19:35:02] 2025-07-23 17:34:24,956 | INFO     | log transfer has been attempted: DONE
[2025-07-23 19:35:02] 2025-07-23 17:34:24,956 | INFO     | job 6743006104 has finished - writing final server update
[2025-07-23 19:35:02] 2025-07-23 17:34:24,956 | INFO     | total number of processed events: 400 (read)
[2025-07-23 19:35:02] 2025-07-23 17:34:24,956 | INFO     | executing command: lscpu
[2025-07-23 19:35:02] 2025-07-23 17:34:25,036 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-07-23 19:35:02] 2025-07-23 17:34:26,776 | WARNING  | process 4081944 can no longer be monitored (due to stat problems) - aborting
[2025-07-23 19:35:02] 2025-07-23 17:34:26,776 | INFO     | using path: /scratch/.boinc/slots/4/PanDA_Pilot-6743006104/memory_monitor_summary.json (trf name=prmon)
[2025-07-23 19:35:02] 2025-07-23 17:34:27,108 | INFO     | number of running child processes to parent process 4081944: 1
[2025-07-23 19:35:02] 2025-07-23 17:34:27,108 | INFO     | maximum number of monitored processes: 6
[2025-07-23 19:35:02] 2025-07-23 17:34:29,611 | INFO     | monitor loop #387: job 0:6743006104 is in state 'finished'
[2025-07-23 19:35:02] 2025-07-23 17:34:29,612 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-23 19:35:02] 2025-07-23 17:34:29,953 | INFO     | CPU arch script returned: x86-64-v3
[2025-07-23 19:35:02] 2025-07-23 17:34:29,968 | INFO     | found 48 cores (24 cores per socket, 2 sockets) HT, CPU MHz: 2731.708458333332
[2025-07-23 19:35:02] 2025-07-23 17:34:29,985 | INFO     | using path: /scratch/.boinc/slots/4/PanDA_Pilot-6743006104/memory_monitor_summary.json (trf name=prmon)
[2025-07-23 19:35:02] 2025-07-23 17:34:29,986 | INFO     | extracted standard info from prmon json
[2025-07-23 19:35:02] 2025-07-23 17:34:29,986 | INFO     | extracted standard memory fields from prmon json
[2025-07-23 19:35:02] 2025-07-23 17:34:29,986 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-23 19:35:02] 2025-07-23 17:34:29,986 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-23 19:35:02] 2025-07-23 17:34:29,986 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-23 19:35:02] 2025-07-23 17:34:29,988 | INFO     | fitting pss+swap vs Time
[2025-07-23 19:35:02] 2025-07-23 17:34:29,988 | INFO     | sum of square deviations: 164765880.0
[2025-07-23 19:35:02] 2025-07-23 17:34:29,989 | INFO     | sum of deviations: 1842295038.0
[2025-07-23 19:35:02] 2025-07-23 17:34:29,989 | INFO     | mean x: 1753289461.0
[2025-07-23 19:35:02] 2025-07-23 17:34:29,989 | INFO     | mean y: 2773718.703703704
[2025-07-23 19:35:02] 2025-07-23 17:34:29,989 | INFO     | -- intersect: -19601263683.809452
[2025-07-23 19:35:02] 2025-07-23 17:34:29,989 | INFO     | intersect: -19601263683.809452
[2025-07-23 19:35:02] 2025-07-23 17:34:29,989 | INFO     | chi2: 0.001195664116334167
[2025-07-23 19:35:02] 2025-07-23 17:34:29,989 | INFO     | -- intersect: -19601263683.809452
[2025-07-23 19:35:02] 2025-07-23 17:34:29,989 | INFO     | current memory leak: 11.18 B/s (using 81 data points, chi2=0.00)
[2025-07-23 19:35:02] 2025-07-23 17:34:29,990 | INFO     | could have reported an average CPU frequency of 2726 MHz (6 samples)
[2025-07-23 19:35:02] 2025-07-23 17:34:29,990 | INFO     | ..............................
[2025-07-23 19:35:02] 2025-07-23 17:34:29,990 | INFO     | . Timing measurements:
[2025-07-23 19:35:02] 2025-07-23 17:34:29,990 | INFO     | . get job = 0 s
[2025-07-23 19:35:02] 2025-07-23 17:34:29,990 | INFO     | . initial setup = 1 s
[2025-07-23 19:35:02] 2025-07-23 17:34:29,990 | INFO     | . payload setup = 7 s
[2025-07-23 19:35:02] 2025-07-23 17:34:29,990 | INFO     | . stage-in = 0 s
[2025-07-23 19:35:02] 2025-07-23 17:34:29,990 | INFO     | . payload execution = 5346 s
[2025-07-23 19:35:02] 2025-07-23 17:34:29,991 | INFO     | . stage-out = 0 s
[2025-07-23 19:35:02] 2025-07-23 17:34:29,991 | INFO     | . log creation = 0 s
[2025-07-23 19:35:02] 2025-07-23 17:34:29,991 | INFO     | ..............................
[2025-07-23 19:35:02] 2025-07-23 17:34:30,197 | INFO     | 
[2025-07-23 19:35:02] 2025-07-23 17:34:30,197 | INFO     | job summary report
[2025-07-23 19:35:02] 2025-07-23 17:34:30,197 | INFO     | --------------------------------------------------
[2025-07-23 19:35:02] 2025-07-23 17:34:30,197 | INFO     | PanDA job id: 6743006104
[2025-07-23 19:35:02] 2025-07-23 17:34:30,198 | INFO     | task id: 45697541
[2025-07-23 19:35:02] 2025-07-23 17:34:30,198 | INFO     | errors: (none)
[2025-07-23 19:35:02] 2025-07-23 17:34:30,198 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-23 19:35:02] 2025-07-23 17:34:30,198 | INFO     | pilot state: finished 
[2025-07-23 19:35:02] 2025-07-23 17:34:30,198 | INFO     | transexitcode: 0
[2025-07-23 19:35:02] 2025-07-23 17:34:30,198 | INFO     | exeerrorcode: 0
[2025-07-23 19:35:02] 2025-07-23 17:34:30,198 | INFO     | exeerrordiag: 
[2025-07-23 19:35:02] 2025-07-23 17:34:30,198 | INFO     | exitcode: 0
[2025-07-23 19:35:02] 2025-07-23 17:34:30,198 | INFO     | exitmsg: OK
[2025-07-23 19:35:02] 2025-07-23 17:34:30,198 | INFO     | cpuconsumptiontime: 58604 s
[2025-07-23 19:35:02] 2025-07-23 17:34:30,198 | INFO     | nevents: 400
[2025-07-23 19:35:02] 2025-07-23 17:34:30,198 | INFO     | neventsw: 0
[2025-07-23 19:35:02] 2025-07-23 17:34:30,198 | INFO     | pid: 4081944
[2025-07-23 19:35:02] 2025-07-23 17:34:30,199 | INFO     | pgrp: 4081944
[2025-07-23 19:35:02] 2025-07-23 17:34:30,199 | INFO     | corecount: 12
[2025-07-23 19:35:02] 2025-07-23 17:34:30,199 | INFO     | event service: False
[2025-07-23 19:35:02] 2025-07-23 17:34:30,199 | INFO     | sizes: {0: 2397346, 1: 2397545, 6: 2397807, 11: 2397835, 5358: 2424446, 5360: 2433446, 5362: 2433630, 5367: 2433824}
[2025-07-23 19:35:02] 2025-07-23 17:34:30,199 | INFO     | --------------------------------------------------
[2025-07-23 19:35:02] 2025-07-23 17:34:30,199 | INFO     | 
[2025-07-23 19:35:02] 2025-07-23 17:34:30,199 | INFO     | executing command: ls -lF /scratch/.boinc/slots/4
[2025-07-23 19:35:02] 2025-07-23 17:34:30,223 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-23 19:35:02] 2025-07-23 17:34:30,224 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-23 19:35:02] 2025-07-23 17:34:30,224 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-23 19:35:02] 2025-07-23 17:34:30,224 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-23 19:35:02] 2025-07-23 17:34:30,224 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-23 19:35:02] 2025-07-23 17:34:30,224 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-23 19:35:02] 2025-07-23 17:34:30,224 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-23 19:35:02] 2025-07-23 17:34:30,224 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-23 19:35:02] 2025-07-23 17:34:30,224 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-23 19:35:02] 2025-07-23 17:34:30,225 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-23 19:35:02] 2025-07-23 17:34:30,225 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-23 19:35:02] 2025-07-23 17:34:30,225 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-23 19:35:02] 2025-07-23 17:34:30,225 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-23 19:35:02] 2025-07-23 17:34:30,225 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-23 19:35:02] 2025-07-23 17:34:30,225 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-23 19:35:02] 2025-07-23 17:34:30,225 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-23 19:35:02] 2025-07-23 17:34:30,225 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-23 19:35:02] 2025-07-23 17:34:30,225 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-23 19:35:02] 2025-07-23 17:34:30,225 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-23 19:35:02] 2025-07-23 17:34:30,226 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-23 19:35:02] 2025-07-23 17:34:30,226 | INFO     | job 6743006104 has completed (purged errors)
[2025-07-23 19:35:02] 2025-07-23 17:34:30,226 | INFO     | overall cleanup function is called
[2025-07-23 19:35:02] 2025-07-23 17:34:31,235 | INFO     | --- collectZombieJob: --- 10, [4081944]
[2025-07-23 19:35:02] 2025-07-23 17:34:31,236 | INFO     | zombie collector waiting for pid 4081944
[2025-07-23 19:35:02] 2025-07-23 17:34:31,236 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-23 19:35:02] 2025-07-23 17:34:31,236 | INFO     | collected zombie processes
[2025-07-23 19:35:02] 2025-07-23 17:34:31,236 | INFO     | will attempt to kill all subprocesses of pid=4081944
[2025-07-23 19:35:02] 2025-07-23 17:34:31,579 | INFO     | process IDs to be killed: [4081944] (in reverse order)
[2025-07-23 19:35:02] 2025-07-23 17:34:31,689 | WARNING  | found no corresponding commands to process id(s)
[2025-07-23 19:35:02] 2025-07-23 17:34:31,689 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-23 19:35:02] 2025-07-23 17:34:31,700 | INFO     | did not find any defunct processes belonging to 4081944
[2025-07-23 19:35:02] 2025-07-23 17:34:31,710 | INFO     | did not find any defunct processes belonging to 4081944
[2025-07-23 19:35:02] 2025-07-23 17:34:31,710 | INFO     | ready for new job
[2025-07-23 19:35:02] 2025-07-23 17:34:31,710 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-23 19:35:02] 2025-07-23 17:34:31,712 | INFO     | ***************************************
[2025-07-23 19:35:02] 2025-07-23 17:34:31,712 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-23 19:35:02] 2025-07-23 17:34:31,712 | INFO     | ***************************************
[2025-07-23 19:35:02] 2025-07-23 17:34:31,712 | INFO     | 
[2025-07-23 19:35:02] 2025-07-23 17:34:31,718 | INFO     | architecture information:
[2025-07-23 19:35:02] 2025-07-23 17:34:31,718 | INFO     | executing command: cat /etc/os-release
[2025-07-23 19:35:02] 2025-07-23 17:34:31,736 | INFO     | cat /etc/os-release:
[2025-07-23 19:35:02] NAME="CentOS Linux"
[2025-07-23 19:35:02] VERSION="7 (Core)"
[2025-07-23 19:35:02] ID="centos"
[2025-07-23 19:35:02] ID_LIKE="rhel fedora"
[2025-07-23 19:35:02] VERSION_ID="7"
[2025-07-23 19:35:02] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-23 19:35:02] ANSI_COLOR="0;31"
[2025-07-23 19:35:02] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-23 19:35:02] HOME_URL="https://www.centos.org/"
[2025-07-23 19:35:02] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-23 19:35:02] 
[2025-07-23 19:35:02] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-23 19:35:02] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-23 19:35:02] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-23 19:35:02] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-23 19:35:02] 
[2025-07-23 19:35:02] 2025-07-23 17:34:31,736 | INFO     | ***************************************
[2025-07-23 19:35:02] 2025-07-23 17:34:32,238 | INFO     | executing command: df -mP /scratch/.boinc/slots/4
[2025-07-23 19:35:02] 2025-07-23 17:34:32,259 | INFO     | sufficient remaining disk space (1675167268864 B)
[2025-07-23 19:35:02] 2025-07-23 17:34:32,260 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-23 19:35:02] 2025-07-23 17:34:32,260 | INFO     | current server update state: UPDATING_FINAL
[2025-07-23 19:35:02] 2025-07-23 17:34:32,260 | INFO     | update_server=False
[2025-07-23 19:35:02] 2025-07-23 17:34:32,260 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-23 19:35:02] 2025-07-23 17:34:32,260 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-23 19:35:02] 2025-07-23 17:34:32,652 | INFO     | all job control threads have been joined
[2025-07-23 19:35:02] 2025-07-23 17:34:32,784 | INFO     | all data control threads have been joined
[2025-07-23 19:35:02] 2025-07-23 17:34:32,883 | INFO     | all payload control threads have been joined
[2025-07-23 19:35:02] 2025-07-23 17:34:33,121 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-23 19:35:02] 2025-07-23 17:34:33,121 | INFO     | aborting loop
[2025-07-23 19:35:02] 2025-07-23 17:34:33,266 | INFO     | [job] retrieve thread has finished
[2025-07-23 19:35:02] 2025-07-23 17:34:33,454 | INFO     | [payload] validate_pre thread has finished
[2025-07-23 19:35:02] 2025-07-23 17:34:33,480 | INFO     | [payload] validate_post thread has finished
[2025-07-23 19:35:02] 2025-07-23 17:34:33,650 | INFO     | [payload] execute_payloads thread has finished
[2025-07-23 19:35:02] 2025-07-23 17:34:33,658 | INFO     | [job] control thread has finished
[2025-07-23 19:35:02] 2025-07-23 17:34:33,789 | INFO     | [data] control thread has finished
[2025-07-23 19:35:02] 2025-07-23 17:34:33,896 | INFO     | [data] copytool_in thread has finished
[2025-07-23 19:35:02] 2025-07-23 17:34:33,936 | INFO     | [payload] control thread has finished
[2025-07-23 19:35:02] 2025-07-23 17:34:34,126 | INFO     | [job] job monitor thread has finished
[2025-07-23 19:35:02] 2025-07-23 17:34:34,266 | INFO     | [data] copytool_out thread has finished
[2025-07-23 19:35:02] 2025-07-23 17:34:34,300 | INFO     | [job] validate thread has finished
[2025-07-23 19:35:02] 2025-07-23 17:34:34,407 | INFO     | [payload] failed_post thread has finished
[2025-07-23 19:35:02] 2025-07-23 17:34:34,517 | INFO     | [job] create_data_payload thread has finished
[2025-07-23 19:35:02] 2025-07-23 17:34:35,092 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-23 19:35:02] 2025-07-23 17:34:35,464 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-23 19:35:02] 2025-07-23 17:34:36,097 | INFO     | [job] queue monitor thread has finished
[2025-07-23 19:35:02] 2025-07-23 17:34:39,470 | INFO     | [data] queue_monitor thread has finished
[2025-07-23 19:35:02] 2025-07-23 17:34:43,217 | INFO     | job.realtimelogging is not enabled
[2025-07-23 19:35:02] 2025-07-23 17:34:44,222 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-23 19:35:02] 2025-07-23 17:34:45,552 [wrapper] supervise_pilot (15 min periods counter: 7)
[2025-07-23 19:35:02] 2025-07-23 17:34:45,721 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140187334227776)>', '<ExcThread(monitor, started 140186683942656)>']
[2025-07-23 19:35:02] 2025-07-23 17:34:50,731 | INFO     | all workflow threads have been joined
[2025-07-23 19:35:02] 2025-07-23 17:34:50,732 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-23 19:35:02] 2025-07-23 17:34:50,732 | INFO     | traces error code: 0
[2025-07-23 19:35:02] 2025-07-23 17:34:50,732 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-23 19:35:02] 2025-07-23 17:35:02,474 | INFO     | PID=4073515 has CPU usage=6.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-07-23 19:35:02] 2025-07-23 17:35:02,475 | INFO     | .. there are 8 such processes running
[2025-07-23 19:35:02] 2025-07-23 17:35:02,475 | INFO     | found 0 job(s) in 20 queues
[2025-07-23 19:35:02] 2025-07-23 17:35:02,475 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-23 19:35:02] 2025-07-23 17:35:02,475 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-23 19:35:02] 2025-07-23 17:35:02,475 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-23 19:35:02] 2025-07-23 17:35:02,475 | INFO     | [monitor] control thread has ended
[2025-07-23 19:35:02] 2025-07-23 17:35:02,596 [wrapper] ==== pilot stdout END ====
[2025-07-23 19:35:02] 2025-07-23 17:35:02,600 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-23 19:35:02] 2025-07-23 17:35:02,603 [wrapper] pilotpid: 4073515
[2025-07-23 19:35:02] 2025-07-23 17:35:02,608 [wrapper] Pilot exit status: 0
[2025-07-23 19:35:02] 2025-07-23 17:35:02,623 [wrapper] pandaids: 6743006104
[2025-07-23 19:35:02] 2025-07-23 17:35:02,703 [wrapper] cleanup supervisor_pilot   92697 4073516
[2025-07-23 19:35:02] 2025-07-23 17:35:02,708 [wrapper] Test setup, not cleaning
[2025-07-23 19:35:02] 2025-07-23 17:35:02,712 [wrapper] apfmon messages muted
[2025-07-23 19:35:02] 2025-07-23 17:35:02,715 [wrapper] ==== wrapper stdout END ====
[2025-07-23 19:35:02] 2025-07-23 17:35:02,718 [wrapper] ==== wrapper stderr END ====
[2025-07-23 19:35:02]  *** Error codes and diagnostics ***
[2025-07-23 19:35:02]     "exeErrorCode": 0,
[2025-07-23 19:35:02]     "exeErrorDiag": "",
[2025-07-23 19:35:02]     "pilotErrorCode": 0,
[2025-07-23 19:35:02]     "pilotErrorDiag": "",
[2025-07-23 19:35:02]  *** Listing of results directory ***
[2025-07-23 19:35:02] total 637564
[2025-07-23 19:35:02] -rw-r--r-- 1 boinc boinc    530466 Jul 23 04:25 pilot3.tar.gz
[2025-07-23 19:35:02] -rwx------ 1 boinc boinc     36292 Jul 23 04:50 runpilot2-wrapper.sh
[2025-07-23 19:35:02] -rw-r--r-- 1 boinc boinc      5112 Jul 23 04:50 queuedata.json
[2025-07-23 19:35:02] -rw-r--r-- 1 boinc boinc       100 Jul 23 18:04 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-23 19:35:02] -rwxr-xr-x 1 boinc boinc      7986 Jul 23 18:04 run_atlas
[2025-07-23 19:35:02] -rw-r--r-- 1 boinc boinc       105 Jul 23 18:04 job.xml
[2025-07-23 19:35:02] -rw-r--r-- 2 boinc boinc 344536328 Jul 23 18:04 EVNT.45697539._000154.pool.root.1
[2025-07-23 19:35:02] -rw-r--r-- 1 boinc boinc      6664 Jul 23 18:04 init_data.xml
[2025-07-23 19:35:02] -rw-r--r-- 2 boinc boinc     15095 Jul 23 18:04 start_atlas.sh
[2025-07-23 19:35:02] drwxrwx--x 2 boinc boinc      4096 Jul 23 18:04 shared
[2025-07-23 19:35:02] -rw-r--r-- 2 boinc boinc    542901 Jul 23 18:04 input.tar.gz
[2025-07-23 19:35:02] -rw-r--r-- 1 boinc boinc         0 Jul 23 18:04 boinc_lockfile
[2025-07-23 19:35:02] -rw-r--r-- 1 boinc boinc      2602 Jul 23 18:04 pandaJob.out
[2025-07-23 19:35:02] -rw------- 1 boinc boinc    978487 Jul 23 18:04 agis_schedconf.cvmfs.json
[2025-07-23 19:35:02] -rw------- 1 boinc boinc   1593041 Jul 23 18:04 agis_ddmendpoints.agis.ALL.json
[2025-07-23 19:35:02] drwx------ 4 boinc boinc      4096 Jul 23 18:04 pilot3
[2025-07-23 19:35:02] -rw------- 1 boinc boinc 302695301 Jul 23 19:33 HITS.45697541._004683.pool.root.1
[2025-07-23 19:35:02] -rw-r--r-- 1 boinc boinc       529 Jul 23 19:33 boinc_task_state.xml
[2025-07-23 19:35:02] -rw------- 1 boinc boinc      1021 Jul 23 19:34 memory_monitor_summary.json
[2025-07-23 19:35:02] -rw------- 1 boinc boinc    363030 Jul 23 19:34 log.45697541._004683.job.log.tgz.1
[2025-07-23 19:35:02] -rw------- 1 boinc boinc        95 Jul 23 19:34 pilot_heartbeat.json
[2025-07-23 19:35:02] -rw------- 1 boinc boinc      7776 Jul 23 19:34 heartbeat.json
[2025-07-23 19:35:02] -rw-r--r-- 1 boinc boinc      8192 Jul 23 19:35 boinc_mmap_file
[2025-07-23 19:35:02] -rw-r--r-- 1 boinc boinc        27 Jul 23 19:35 wrapper_checkpoint.txt
[2025-07-23 19:35:02] -rw------- 1 boinc boinc       822 Jul 23 19:35 pilotlog.txt
[2025-07-23 19:35:02] -rw------- 1 boinc boinc    514597 Jul 23 19:35 log.45697541._004683.job.log.1
[2025-07-23 19:35:02] -rw------- 1 boinc boinc       357 Jul 23 19:35 output.list
[2025-07-23 19:35:02] -rw-r--r-- 1 boinc boinc       620 Jul 23 19:35 runtime_log
[2025-07-23 19:35:02] -rw------- 1 boinc boinc    901120 Jul 23 19:35 result.tar.gz
[2025-07-23 19:35:02] -rw------- 1 boinc boinc       663 Jul 23 19:35 SeHKDm5jey7n9Rq4apOajLDm4fhM0noT9bVof3QYDmzhvKDmG20Q6m.diag
[2025-07-23 19:35:02] -rw-r--r-- 1 boinc boinc      8721 Jul 23 19:35 runtime_log.err
[2025-07-23 19:35:02] -rw-r--r-- 1 boinc boinc     21734 Jul 23 19:35 stderr.txt
[2025-07-23 19:35:02] HITS file was successfully produced:
[2025-07-23 19:35:02] -rw------- 1 boinc boinc 302695301 Jul 23 19:33 shared/HITS.pool.root.1
[2025-07-23 19:35:02]  *** Contents of shared directory: ***
[2025-07-23 19:35:02] total 633504
[2025-07-23 19:35:02] -rw-r--r-- 2 boinc boinc 344536328 Jul 23 18:04 ATLAS.root_0
[2025-07-23 19:35:02] -rw-r--r-- 2 boinc boinc     15095 Jul 23 18:04 start_atlas.sh
[2025-07-23 19:35:02] -rw-r--r-- 2 boinc boinc    542901 Jul 23 18:04 input.tar.gz
[2025-07-23 19:35:02] -rw------- 1 boinc boinc 302695301 Jul 23 19:33 HITS.pool.root.1
[2025-07-23 19:35:02] -rw------- 1 boinc boinc    901120 Jul 23 19:35 result.tar.gz
19:35:04 (4069529): run_atlas exited; CPU time 58735.756713
19:35:04 (4069529): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN