Stderr output

<core_client_version>8.0.4</core_client_version>
<![CDATA[
<stderr_txt>
20:20:43 (729195): wrapper (7.7.26015): starting
20:20:43 (729195): wrapper: running run_atlas (--nthreads 4)
[2025-07-23 20:20:43] Arguments: --nthreads 4
[2025-07-23 20:20:43] Threads: 4
[2025-07-23 20:20:43] Checking for CVMFS
[2025-07-23 20:20:43] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-23 20:20:43] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-23 20:20:43] Running cvmfs_config stat atlas.cern.ch
[2025-07-23 20:20:43] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-23 20:20:43] 2.9.2.0 6436 2704 89860 148668 3 56 28716471 36864001 0 130560 0 1881967 99.988 101069 1441 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-07-23 20:20:43] CVMFS is ok
[2025-07-23 20:20:43] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-07-23 20:20:43] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-07-23 20:20:43] Further information can be found at the LHC@home message board.
[2025-07-23 20:20:43] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-23 20:20:43] Checking for apptainer binary...
[2025-07-23 20:20:43] Using apptainer found in PATH at /usr/bin/apptainer
[2025-07-23 20:20:43] Running /usr/bin/apptainer --version
[2025-07-23 20:20:43] apptainer version 1.3.6-6.1
[2025-07-23 20:20:43] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-23 20:20:43] thA319
[2025-07-23 20:20:43] apptainer works
[2025-07-23 20:20:43] Set ATHENA_PROC_NUMBER=4
[2025-07-23 20:20:43] Set ATHENA_CORE_NUMBER=4
[2025-07-23 20:20:44] Starting ATLAS job with PandaID=6743007564
[2025-07-23 20:20:44] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-23 22:14:42]  *** The last 200 lines of the pilot log: ***
[2025-07-23 22:14:42] 2025-07-23 20:14:10,999 | INFO     | extracted standard memory fields from prmon json
[2025-07-23 22:14:42] 2025-07-23 20:14:10,999 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-23 22:14:42] 2025-07-23 20:14:10,999 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-23 22:14:42] 2025-07-23 20:14:11,000 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-23 22:14:42] 2025-07-23 20:14:11,000 | INFO     | fitting pss+swap vs Time
[2025-07-23 22:14:42] 2025-07-23 20:14:11,001 | INFO     | sum of square deviations: 424045160.0
[2025-07-23 22:14:42] 2025-07-23 20:14:11,001 | INFO     | sum of deviations: -5088188120.000002
[2025-07-23 22:14:42] 2025-07-23 20:14:11,001 | INFO     | mean x: 1753298229.0
[2025-07-23 22:14:42] 2025-07-23 20:14:11,001 | INFO     | mean y: 2518961.045045045
[2025-07-23 22:14:42] 2025-07-23 20:14:11,001 | INFO     | -- intersect: 21040634853.26474
[2025-07-23 22:14:42] 2025-07-23 20:14:11,001 | INFO     | intersect: 21040634853.26474
[2025-07-23 22:14:42] 2025-07-23 20:14:11,001 | INFO     | chi2: 1.667600779417377
[2025-07-23 22:14:42] 2025-07-23 20:14:11,001 | INFO     | sum of square deviations: 369281342.5
[2025-07-23 22:14:42] 2025-07-23 20:14:11,001 | INFO     | sum of deviations: -4370647529.499997
[2025-07-23 22:14:42] 2025-07-23 20:14:11,001 | INFO     | mean x: 1753298076.5
[2025-07-23 22:14:42] 2025-07-23 20:14:11,001 | INFO     | mean y: 2520960.462264151
[2025-07-23 22:14:42] 2025-07-23 20:14:11,002 | INFO     | -- intersect: 20753766757.646893
[2025-07-23 22:14:42] 2025-07-23 20:14:11,002 | INFO     | intersect: 20753766757.646893
[2025-07-23 22:14:42] 2025-07-23 20:14:11,002 | INFO     | chi2: 1.6680039651357803
[2025-07-23 22:14:42] 2025-07-23 20:14:11,002 | INFO     | current chi2=1.6680039651357803 (change=-0.024177592345820207 %)
[2025-07-23 22:14:42] 2025-07-23 20:14:11,002 | INFO     | right removable region: 105
[2025-07-23 22:14:42] 2025-07-23 20:14:11,002 | INFO     | sum of square deviations: 369281342.5
[2025-07-23 22:14:42] 2025-07-23 20:14:11,002 | INFO     | sum of deviations: -21859536141.499992
[2025-07-23 22:14:42] 2025-07-23 20:14:11,003 | INFO     | mean x: 1753298381.5
[2025-07-23 22:14:42] 2025-07-23 20:14:11,003 | INFO     | mean y: 2564627.7075471696
[2025-07-23 22:14:42] 2025-07-23 20:14:11,003 | INFO     | -- intersect: 103788716069.2272
[2025-07-23 22:14:42] 2025-07-23 20:14:11,003 | INFO     | intersect: 103788716069.2272
[2025-07-23 22:14:42] 2025-07-23 20:14:11,003 | INFO     | chi2: 0.07195722007614735
[2025-07-23 22:14:42] 2025-07-23 20:14:11,003 | INFO     | current chi2=0.07195722007614735 (change=95.68498522162555 %)
[2025-07-23 22:14:42] 2025-07-23 20:14:11,003 | INFO     | sum of square deviations: 319447850.0
[2025-07-23 22:14:42] 2025-07-23 20:14:11,003 | INFO     | sum of deviations: -18331801191.0
[2025-07-23 22:14:42] 2025-07-23 20:14:11,003 | INFO     | mean x: 1753298534.0
[2025-07-23 22:14:42] 2025-07-23 20:14:11,003 | INFO     | mean y: 2553804.5544554456
[2025-07-23 22:14:42] 2025-07-23 20:14:11,003 | INFO     | -- intersect: 100617161646.67877
[2025-07-23 22:14:42] 2025-07-23 20:14:11,003 | INFO     | intersect: 100617161646.67877
[2025-07-23 22:14:42] 2025-07-23 20:14:11,003 | INFO     | chi2: 0.07040869845016842
[2025-07-23 22:14:42] 2025-07-23 20:14:11,003 | INFO     | current chi2=0.07040869845016842 (change=2.152003126774824 %)
[2025-07-23 22:14:42] 2025-07-23 20:14:11,003 | INFO     | left removable region: 20
[2025-07-23 22:14:42] 2025-07-23 20:14:11,004 | INFO     | sum of square deviations: 190403570.0
[2025-07-23 22:14:42] 2025-07-23 20:14:11,004 | INFO     | sum of deviations: -11707246880.0
[2025-07-23 22:14:42] 2025-07-23 20:14:11,004 | INFO     | mean x: 1753298656.0
[2025-07-23 22:14:42] 2025-07-23 20:14:11,004 | INFO     | mean y: 2538051.776470588
[2025-07-23 22:14:42] 2025-07-23 20:14:11,004 | INFO     | -- intersect: 107806715358.7681
[2025-07-23 22:14:42] 2025-07-23 20:14:11,004 | INFO     | intersect: 107806715358.7681
[2025-07-23 22:14:42] 2025-07-23 20:14:11,004 | INFO     | chi2: 0.05483664841980281
[2025-07-23 22:14:42] 2025-07-23 20:14:11,004 | INFO     | -- intersect: 107806715358.7681
[2025-07-23 22:14:42] 2025-07-23 20:14:11,004 | INFO     | current memory leak: -61.49 B/s (using 85 data points, chi2=0.05)
[2025-07-23 22:14:42] 2025-07-23 20:14:11,004 | INFO     | sufficient remaining disk space (322307096576 B)
[2025-07-23 22:14:42] 2025-07-23 20:14:11,004 | INFO     | work directory size check will use 2537553920 B as a max limit (10% grace limit added)
[2025-07-23 22:14:42] 2025-07-23 20:14:11,005 | INFO     | could have reported an average CPU frequency of 3768 MHz (7 samples)
[2025-07-23 22:14:42] 2025-07-23 20:14:11,005 | INFO     | ..............................
[2025-07-23 22:14:42] 2025-07-23 20:14:11,005 | INFO     | . Timing measurements:
[2025-07-23 22:14:42] 2025-07-23 20:14:11,005 | INFO     | . get job = 0 s
[2025-07-23 22:14:42] 2025-07-23 20:14:11,005 | INFO     | . initial setup = 1 s
[2025-07-23 22:14:42] 2025-07-23 20:14:11,005 | INFO     | . payload setup = 4 s
[2025-07-23 22:14:42] 2025-07-23 20:14:11,005 | INFO     | . stage-in = 0 s
[2025-07-23 22:14:42] 2025-07-23 20:14:11,005 | INFO     | . payload execution = 6767 s
[2025-07-23 22:14:42] 2025-07-23 20:14:11,005 | INFO     | . stage-out = 0 s
[2025-07-23 22:14:42] 2025-07-23 20:14:11,005 | INFO     | . log creation = 0 s
[2025-07-23 22:14:42] 2025-07-23 20:14:11,005 | INFO     | ..............................
[2025-07-23 22:14:42] 2025-07-23 20:14:11,046 | INFO     | 
[2025-07-23 22:14:42] 2025-07-23 20:14:11,046 | INFO     | job summary report
[2025-07-23 22:14:42] 2025-07-23 20:14:11,046 | INFO     | --------------------------------------------------
[2025-07-23 22:14:42] 2025-07-23 20:14:11,046 | INFO     | PanDA job id: 6743007564
[2025-07-23 22:14:42] 2025-07-23 20:14:11,046 | INFO     | task id: 45697541
[2025-07-23 22:14:42] 2025-07-23 20:14:11,046 | INFO     | errors: (none)
[2025-07-23 22:14:42] 2025-07-23 20:14:11,046 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-23 22:14:42] 2025-07-23 20:14:11,046 | INFO     | pilot state: finished 
[2025-07-23 22:14:42] 2025-07-23 20:14:11,046 | INFO     | transexitcode: 0
[2025-07-23 22:14:42] 2025-07-23 20:14:11,046 | INFO     | exeerrorcode: 0
[2025-07-23 22:14:42] 2025-07-23 20:14:11,046 | INFO     | exeerrordiag: 
[2025-07-23 22:14:42] 2025-07-23 20:14:11,046 | INFO     | exitcode: 0
[2025-07-23 22:14:42] 2025-07-23 20:14:11,046 | INFO     | exitmsg: OK
[2025-07-23 22:14:42] 2025-07-23 20:14:11,046 | INFO     | cpuconsumptiontime: 26031 s
[2025-07-23 22:14:42] 2025-07-23 20:14:11,046 | INFO     | nevents: 400
[2025-07-23 22:14:42] 2025-07-23 20:14:11,046 | INFO     | neventsw: 0
[2025-07-23 22:14:42] 2025-07-23 20:14:11,047 | INFO     | pid: 739528
[2025-07-23 22:14:42] 2025-07-23 20:14:11,047 | INFO     | pgrp: 739528
[2025-07-23 22:14:42] 2025-07-23 20:14:11,047 | INFO     | corecount: 4
[2025-07-23 22:14:42] 2025-07-23 20:14:11,047 | INFO     | event service: False
[2025-07-23 22:14:42] 2025-07-23 20:14:11,047 | INFO     | sizes: {0: 2397517, 3: 2397779, 11: 2397807, 6775: 2425112, 6776: 2425111, 6778: 2434171, 6779: 2434355, 6786: 2434549}
[2025-07-23 22:14:42] 2025-07-23 20:14:11,047 | INFO     | --------------------------------------------------
[2025-07-23 22:14:42] 2025-07-23 20:14:11,047 | INFO     | 
[2025-07-23 22:14:42] 2025-07-23 20:14:11,047 | INFO     | executing command: ls -lF /local/data/boinc/slots/0
[2025-07-23 22:14:42] 2025-07-23 20:14:11,050 | INFO     | size of work directory /local/data/boinc/slots/0/PanDA_Pilot-6743007564: 2274098 B (within 2537553920 B limit)
[2025-07-23 22:14:42] 2025-07-23 20:14:11,050 | INFO     | pfn file=/local/data/boinc/slots/0/PanDA_Pilot-6743007564/HITS.45697541._004955.pool.root.1 does not exist (skip from workdir size calculation)
[2025-07-23 22:14:42] 2025-07-23 20:14:11,050 | INFO     | total size of present files: 0 B (workdir size: 2274098 B)
[2025-07-23 22:14:42] 2025-07-23 20:14:11,050 | INFO     | output file size check: skipping output file /local/data/boinc/slots/0/PanDA_Pilot-6743007564/HITS.45697541._004955.pool.root.1 since it does not exist
[2025-07-23 22:14:42] 2025-07-23 20:14:11,064 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-23 22:14:42] 2025-07-23 20:14:11,065 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-23 22:14:42] 2025-07-23 20:14:11,065 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-23 22:14:42] 2025-07-23 20:14:11,065 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-23 22:14:42] 2025-07-23 20:14:11,065 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-23 22:14:42] 2025-07-23 20:14:11,065 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-23 22:14:42] 2025-07-23 20:14:11,065 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-23 22:14:42] 2025-07-23 20:14:11,065 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-23 22:14:42] 2025-07-23 20:14:11,065 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-23 22:14:42] 2025-07-23 20:14:11,065 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-23 22:14:42] 2025-07-23 20:14:11,065 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-23 22:14:42] 2025-07-23 20:14:11,065 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-23 22:14:42] 2025-07-23 20:14:11,065 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-23 22:14:42] 2025-07-23 20:14:11,065 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-23 22:14:42] 2025-07-23 20:14:11,065 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-23 22:14:42] 2025-07-23 20:14:11,065 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-23 22:14:42] 2025-07-23 20:14:11,065 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-23 22:14:42] 2025-07-23 20:14:11,065 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-23 22:14:42] 2025-07-23 20:14:11,065 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-23 22:14:42] 2025-07-23 20:14:11,065 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-23 22:14:42] 2025-07-23 20:14:11,065 | INFO     | job 6743007564 has completed (purged errors)
[2025-07-23 22:14:42] 2025-07-23 20:14:11,065 | INFO     | overall cleanup function is called
[2025-07-23 22:14:42] 2025-07-23 20:14:11,096 | INFO     | number of running child processes to parent process 739528: 1
[2025-07-23 22:14:42] 2025-07-23 20:14:11,097 | INFO     | maximum number of monitored processes: 6
[2025-07-23 22:14:42] 2025-07-23 20:14:11,097 | INFO     | aborting job monitoring since job object (job id=6743007564) has expired
[2025-07-23 22:14:42] 2025-07-23 20:14:12,072 | INFO     | --- collectZombieJob: --- 10, [739528]
[2025-07-23 22:14:42] 2025-07-23 20:14:12,073 | INFO     | zombie collector waiting for pid 739528
[2025-07-23 22:14:42] 2025-07-23 20:14:12,073 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-23 22:14:42] 2025-07-23 20:14:12,073 | INFO     | collected zombie processes
[2025-07-23 22:14:42] 2025-07-23 20:14:12,073 | INFO     | will attempt to kill all subprocesses of pid=739528
[2025-07-23 22:14:42] 2025-07-23 20:14:12,116 | INFO     | process IDs to be killed: [739528] (in reverse order)
[2025-07-23 22:14:42] 2025-07-23 20:14:12,147 | WARNING  | found no corresponding commands to process id(s)
[2025-07-23 22:14:42] 2025-07-23 20:14:12,147 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-23 22:14:42] 2025-07-23 20:14:12,149 | INFO     | did not find any defunct processes belonging to 739528
[2025-07-23 22:14:42] 2025-07-23 20:14:12,150 | INFO     | did not find any defunct processes belonging to 739528
[2025-07-23 22:14:42] 2025-07-23 20:14:12,150 | INFO     | ready for new job
[2025-07-23 22:14:42] 2025-07-23 20:14:12,150 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-23 22:14:42] 2025-07-23 20:14:12,151 | INFO     | ***************************************
[2025-07-23 22:14:42] 2025-07-23 20:14:12,151 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-23 22:14:42] 2025-07-23 20:14:12,151 | INFO     | ***************************************
[2025-07-23 22:14:42] 2025-07-23 20:14:12,151 | INFO     | 
[2025-07-23 22:14:42] 2025-07-23 20:14:12,151 | INFO     | architecture information:
[2025-07-23 22:14:42] 2025-07-23 20:14:12,151 | INFO     | executing command: cat /etc/os-release
[2025-07-23 22:14:42] 2025-07-23 20:14:12,164 | INFO     | cat /etc/os-release:
[2025-07-23 22:14:42] NAME="CentOS Linux"
[2025-07-23 22:14:42] VERSION="7 (Core)"
[2025-07-23 22:14:42] ID="centos"
[2025-07-23 22:14:42] ID_LIKE="rhel fedora"
[2025-07-23 22:14:42] VERSION_ID="7"
[2025-07-23 22:14:42] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-23 22:14:42] ANSI_COLOR="0;31"
[2025-07-23 22:14:42] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-23 22:14:42] HOME_URL="https://www.centos.org/"
[2025-07-23 22:14:42] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-23 22:14:42] 
[2025-07-23 22:14:42] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-23 22:14:42] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-23 22:14:42] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-23 22:14:42] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-23 22:14:42] 
[2025-07-23 22:14:42] 2025-07-23 20:14:12,164 | INFO     | ***************************************
[2025-07-23 22:14:42] 2025-07-23 20:14:12,667 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2025-07-23 22:14:42] 2025-07-23 20:14:12,685 | INFO     | sufficient remaining disk space (322310242304 B)
[2025-07-23 22:14:42] 2025-07-23 20:14:12,685 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-23 22:14:42] 2025-07-23 20:14:12,685 | INFO     | current server update state: UPDATING_FINAL
[2025-07-23 22:14:42] 2025-07-23 20:14:12,685 | INFO     | update_server=False
[2025-07-23 22:14:42] 2025-07-23 20:14:12,685 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-23 22:14:42] 2025-07-23 20:14:12,685 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-23 22:14:42] 2025-07-23 20:14:12,685 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-23 22:14:42] 2025-07-23 20:14:12,685 | INFO     | aborting loop
[2025-07-23 22:14:42] 2025-07-23 20:14:12,970 | INFO     | all data control threads have been joined
[2025-07-23 22:14:42] 2025-07-23 20:14:13,087 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-23 22:14:42] 2025-07-23 20:14:13,579 | INFO     | all payload control threads have been joined
[2025-07-23 22:14:42] 2025-07-23 20:14:13,690 | INFO     | [job] retrieve thread has finished
[2025-07-23 22:14:42] 2025-07-23 20:14:13,691 | INFO     | [job] queue monitor thread has finished
[2025-07-23 22:14:42] 2025-07-23 20:14:13,692 | INFO     | [job] job monitor thread has finished
[2025-07-23 22:14:42] 2025-07-23 20:14:13,702 | INFO     | [data] copytool_in thread has finished
[2025-07-23 22:14:42] 2025-07-23 20:14:13,885 | INFO     | all job control threads have been joined
[2025-07-23 22:14:42] 2025-07-23 20:14:13,976 | INFO     | [data] control thread has finished
[2025-07-23 22:14:42] 2025-07-23 20:14:14,023 | INFO     | [payload] failed_post thread has finished
[2025-07-23 22:14:42] 2025-07-23 20:14:14,195 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-23 22:14:42] 2025-07-23 20:14:14,553 | INFO     | [payload] validate_post thread has finished
[2025-07-23 22:14:42] 2025-07-23 20:14:14,577 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-23 22:14:42] 2025-07-23 20:14:14,584 | INFO     | [payload] control thread has finished
[2025-07-23 22:14:42] 2025-07-23 20:14:14,741 | INFO     | [job] validate thread has finished
[2025-07-23 22:14:42] 2025-07-23 20:14:14,873 | INFO     | [payload] execute_payloads thread has finished
[2025-07-23 22:14:42] 2025-07-23 20:14:14,877 | INFO     | [job] create_data_payload thread has finished
[2025-07-23 22:14:42] 2025-07-23 20:14:14,890 | INFO     | [job] control thread has finished
[2025-07-23 22:14:42] 2025-07-23 20:14:14,950 | INFO     | [payload] validate_pre thread has finished
[2025-07-23 22:14:42] 2025-07-23 20:14:15,093 | INFO     | [data] copytool_out thread has finished
[2025-07-23 22:14:42] 2025-07-23 20:14:18,203 | INFO     | [data] queue_monitor thread has finished
[2025-07-23 22:14:42] 2025-07-23 20:14:18,675 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140646715664192)>', '<ExcThread(monitor, started 140645339490048)>']
[2025-07-23 22:14:42] 2025-07-23 20:14:23,701 | INFO     | all workflow threads have been joined
[2025-07-23 22:14:42] 2025-07-23 20:14:23,701 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-23 22:14:42] 2025-07-23 20:14:23,701 | INFO     | traces error code: 0
[2025-07-23 22:14:42] 2025-07-23 20:14:23,701 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-23 22:14:42] 2025-07-23 20:14:42,386 | INFO     | PID=732907 has CPU usage=2.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-07-23 22:14:42] 2025-07-23 20:14:42,387 | INFO     | found 0 job(s) in 20 queues
[2025-07-23 22:14:42] 2025-07-23 20:14:42,387 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-23 22:14:42] 2025-07-23 20:14:42,387 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-23 22:14:42] 2025-07-23 20:14:42,387 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-23 22:14:42] 2025-07-23 20:14:42,387 | INFO     | [monitor] control thread has ended
[2025-07-23 22:14:42] 2025-07-23 20:14:42,451 [wrapper] ==== pilot stdout END ====
[2025-07-23 22:14:42] 2025-07-23 20:14:42,455 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-23 22:14:42] 2025-07-23 20:14:42,459 [wrapper] pilotpid: 732907
[2025-07-23 22:14:42] 2025-07-23 20:14:42,462 [wrapper] Pilot exit status: 0
[2025-07-23 22:14:42] 2025-07-23 20:14:42,472 [wrapper] pandaids: 6743007564
[2025-07-23 22:14:42] 2025-07-23 20:14:42,493 [wrapper] cleanup supervisor_pilot  755146 732908
[2025-07-23 22:14:42] 2025-07-23 20:14:42,497 [wrapper] Test setup, not cleaning
[2025-07-23 22:14:42] 2025-07-23 20:14:42,500 [wrapper] apfmon messages muted
[2025-07-23 22:14:42] 2025-07-23 20:14:42,504 [wrapper] ==== wrapper stdout END ====
[2025-07-23 22:14:42] 2025-07-23 20:14:42,507 [wrapper] ==== wrapper stderr END ====
[2025-07-23 22:14:42]  *** Error codes and diagnostics ***
[2025-07-23 22:14:42]     "exeErrorCode": 0,
[2025-07-23 22:14:42]     "exeErrorDiag": "",
[2025-07-23 22:14:42]     "pilotErrorCode": 0,
[2025-07-23 22:14:42]     "pilotErrorDiag": "",
[2025-07-23 22:14:42]  *** Listing of results directory ***
[2025-07-23 22:14:42] total 641140
[2025-07-23 22:14:42] -rw-r--r-- 1 boinc boinc    530466 Jul 23 04:25 pilot3.tar.gz
[2025-07-23 22:14:42] -rwx------ 1 boinc boinc     36292 Jul 23 05:07 runpilot2-wrapper.sh
[2025-07-23 22:14:42] -rw-r--r-- 1 boinc boinc      5112 Jul 23 05:07 queuedata.json
[2025-07-23 22:14:42] -rw-r--r-- 1 boinc boinc       100 Jul 23 20:20 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-23 22:14:42] -rwxr-xr-x 1 boinc boinc      7986 Jul 23 20:20 run_atlas
[2025-07-23 22:14:42] -rw-r--r-- 1 boinc boinc       105 Jul 23 20:20 job.xml
[2025-07-23 22:14:42] -rw-r--r-- 2 boinc boinc 345235677 Jul 23 20:20 EVNT.45697539._000165.pool.root.1
[2025-07-23 22:14:42] -rw-r--r-- 1 boinc boinc      6853 Jul 23 20:20 init_data.xml
[2025-07-23 22:14:42] drwxrwx--x 2 boinc boinc      4096 Jul 23 20:20 shared
[2025-07-23 22:14:42] -rw-r--r-- 2 boinc boinc    542893 Jul 23 20:20 input.tar.gz
[2025-07-23 22:14:42] -rw-r--r-- 2 boinc boinc     15095 Jul 23 20:20 start_atlas.sh
[2025-07-23 22:14:42] -rw-r--r-- 1 boinc boinc         0 Jul 23 20:20 boinc_lockfile
[2025-07-23 22:14:42] -rw-r--r-- 1 boinc boinc      2601 Jul 23 20:20 pandaJob.out
[2025-07-23 22:14:42] -rw------- 1 boinc boinc    978487 Jul 23 20:20 agis_schedconf.cvmfs.json
[2025-07-23 22:14:42] -rw------- 1 boinc boinc   1593041 Jul 23 20:20 agis_ddmendpoints.agis.ALL.json
[2025-07-23 22:14:42] drwx------ 4 boinc boinc      4096 Jul 23 20:20 pilot3
[2025-07-23 22:14:42] -rw------- 1 boinc boinc 305624117 Jul 23 22:13 HITS.45697541._004955.pool.root.1
[2025-07-23 22:14:42] -rw-r--r-- 1 boinc boinc       529 Jul 23 22:13 boinc_task_state.xml
[2025-07-23 22:14:42] -rw------- 1 boinc boinc      1035 Jul 23 22:13 memory_monitor_summary.json
[2025-07-23 22:14:42] -rw------- 1 boinc boinc    251552 Jul 23 22:14 log.45697541._004955.job.log.tgz.1
[2025-07-23 22:14:42] -rw------- 1 boinc boinc      7760 Jul 23 22:14 heartbeat.json
[2025-07-23 22:14:42] -rw-r--r-- 1 boinc boinc      8192 Jul 23 22:14 boinc_mmap_file
[2025-07-23 22:14:42] -rw-r--r-- 1 boinc boinc        27 Jul 23 22:14 wrapper_checkpoint.txt
[2025-07-23 22:14:42] -rw------- 1 boinc boinc       746 Jul 23 22:14 pilotlog.txt
[2025-07-23 22:14:42] -rw------- 1 boinc boinc        95 Jul 23 22:14 pilot_heartbeat.json
[2025-07-23 22:14:42] -rw------- 1 boinc boinc    644251 Jul 23 22:14 log.45697541._004955.job.log.1
[2025-07-23 22:14:42] -rw------- 1 boinc boinc       357 Jul 23 22:14 output.list
[2025-07-23 22:14:42] -rw-r--r-- 1 boinc boinc       620 Jul 23 22:14 runtime_log
[2025-07-23 22:14:42] -rw------- 1 boinc boinc    911360 Jul 23 22:14 result.tar.gz
[2025-07-23 22:14:42] -rw-r--r-- 1 boinc boinc      8734 Jul 23 22:14 runtime_log.err
[2025-07-23 22:14:42] -rw------- 1 boinc boinc       659 Jul 23 22:14 dgOLDm4zey7n9Rq4apOajLDm4fhM0noT9bVof3QYDmDjvKDm9nmvSm.diag
[2025-07-23 22:14:42] -rw-r--r-- 1 boinc boinc     21344 Jul 23 22:14 stderr.txt
[2025-07-23 22:14:42] HITS file was successfully produced:
[2025-07-23 22:14:42] -rw------- 1 boinc boinc 305624117 Jul 23 22:13 shared/HITS.pool.root.1
[2025-07-23 22:14:42]  *** Contents of shared directory: ***
[2025-07-23 22:14:42] total 637060
[2025-07-23 22:14:42] -rw-r--r-- 2 boinc boinc 345235677 Jul 23 20:20 ATLAS.root_0
[2025-07-23 22:14:42] -rw-r--r-- 2 boinc boinc    542893 Jul 23 20:20 input.tar.gz
[2025-07-23 22:14:42] -rw-r--r-- 2 boinc boinc     15095 Jul 23 20:20 start_atlas.sh
[2025-07-23 22:14:42] -rw------- 1 boinc boinc 305624117 Jul 23 22:13 HITS.pool.root.1
[2025-07-23 22:14:42] -rw------- 1 boinc boinc    911360 Jul 23 22:14 result.tar.gz
22:14:43 (729195): run_atlas exited; CPU time 26054.633788
22:14:43 (729195): called boinc_finish(0)

</stderr_txt>
]]>

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