Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
06:29:30 (685674): wrapper (7.7.26015): starting
06:29:30 (685674): wrapper: running run_atlas (--nthreads 10)
[2025-07-23 06:29:30] Arguments: --nthreads 10
[2025-07-23 06:29:30] Threads: 10
[2025-07-23 06:29:30] Checking for CVMFS
[2025-07-23 06:29:30] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-23 06:29:30] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-23 06:29:30] Running cvmfs_config stat atlas.cern.ch
[2025-07-23 06:29:31] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-23 06:29:31] 2.12.6.0 4120630 12503 282216 148655 1 76 27460992 32935936 10250 16776704 0 41806121 99.520 57483766 29673 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-07-23 06:29:31] CVMFS is ok
[2025-07-23 06:29:31] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-07-23 06:29:31] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-07-23 06:29:31] Further information can be found at the LHC@home message board.
[2025-07-23 06:29:31] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-23 06:29:31] Checking for apptainer binary...
[2025-07-23 06:29:31] Using apptainer found in PATH at /usr/bin/apptainer
[2025-07-23 06:29:31] Running /usr/bin/apptainer --version
[2025-07-23 06:29:31] apptainer version 1.4.1-1.el9
[2025-07-23 06:29:31] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-23 06:29:31] c-5-4.aglt2.org
[2025-07-23 06:29:31] apptainer works
[2025-07-23 06:29:31] Set ATHENA_PROC_NUMBER=10
[2025-07-23 06:29:31] Set ATHENA_CORE_NUMBER=10
[2025-07-23 06:29:31] Starting ATLAS job with PandaID=6743006201
[2025-07-23 06:29:31] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-23 10:35:52]  *** The last 200 lines of the pilot log: ***
[2025-07-23 10:35:52] 2025-07-23 14:35:15,266 | INFO     | PID=689254 has CPU usage=13.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-07-23 10:35:52] 2025-07-23 14:35:15,267 | INFO     | .. there are 20 such processes running
[2025-07-23 10:35:52] 2025-07-23 14:35:17,219 | INFO     | monitor loop #1059: job 0:6743006201 is in state 'finished'
[2025-07-23 10:35:52] 2025-07-23 14:35:17,219 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-23 10:35:52] 2025-07-23 14:35:19,183 | INFO     | CPU arch script returned: x86-64-v3
[2025-07-23 10:35:52] 2025-07-23 14:35:19,190 | INFO     | found 20 cores (10 cores per socket, 2 sockets) HT, CPU MHz: 2639.972700000001
[2025-07-23 10:35:52] 2025-07-23 14:35:19,197 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6743006201/memory_monitor_summary.json (trf name=prmon)
[2025-07-23 10:35:52] 2025-07-23 14:35:19,198 | INFO     | extracted standard info from prmon json
[2025-07-23 10:35:52] 2025-07-23 14:35:19,198 | INFO     | extracted standard memory fields from prmon json
[2025-07-23 10:35:52] 2025-07-23 14:35:19,198 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-23 10:35:52] 2025-07-23 14:35:19,198 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-23 10:35:52] 2025-07-23 14:35:19,199 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-23 10:35:52] 2025-07-23 14:35:19,204 | INFO     | fitting pss+swap vs Time
[2025-07-23 10:35:52] 2025-07-23 14:35:19,204 | INFO     | sum of square deviations: 4340323240.0
[2025-07-23 10:35:52] 2025-07-23 14:35:19,206 | INFO     | sum of deviations: -47518247199.0
[2025-07-23 10:35:52] 2025-07-23 14:35:19,207 | INFO     | mean x: 1753273926.0
[2025-07-23 10:35:52] 2025-07-23 14:35:19,207 | INFO     | mean y: 2342666.9626556016
[2025-07-23 10:35:52] 2025-07-23 14:35:19,207 | INFO     | -- intersect: 19197342489.885803
[2025-07-23 10:35:52] 2025-07-23 14:35:19,207 | INFO     | intersect: 19197342489.885803
[2025-07-23 10:35:52] 2025-07-23 14:35:19,208 | INFO     | chi2: 2.1172035866498295
[2025-07-23 10:35:52] 2025-07-23 14:35:19,208 | INFO     | sum of square deviations: 4075741535.0
[2025-07-23 10:35:52] 2025-07-23 14:35:19,210 | INFO     | sum of deviations: -44493901908.000015
[2025-07-23 10:35:52] 2025-07-23 14:35:19,210 | INFO     | mean x: 1753273773.5
[2025-07-23 10:35:52] 2025-07-23 14:35:19,210 | INFO     | mean y: 2344400.161016949
[2025-07-23 10:35:52] 2025-07-23 14:35:19,210 | INFO     | -- intersect: 19142417593.24146
[2025-07-23 10:35:52] 2025-07-23 14:35:19,211 | INFO     | intersect: 19142417593.24146
[2025-07-23 10:35:52] 2025-07-23 14:35:19,211 | INFO     | chi2: 2.1153531181502303
[2025-07-23 10:35:52] 2025-07-23 14:35:19,211 | INFO     | current chi2=2.1153531181502303 (change=0.08740153810750649 %)
[2025-07-23 10:35:52] 2025-07-23 14:35:19,211 | INFO     | right removable region: 235
[2025-07-23 10:35:52] 2025-07-23 14:35:19,212 | INFO     | sum of square deviations: 4075741535.0
[2025-07-23 10:35:52] 2025-07-23 14:35:19,214 | INFO     | sum of deviations: -83170608417.00002
[2025-07-23 10:35:52] 2025-07-23 14:35:19,214 | INFO     | mean x: 1753274078.5
[2025-07-23 10:35:52] 2025-07-23 14:35:19,214 | INFO     | mean y: 2363057.4576271186
[2025-07-23 10:35:52] 2025-07-23 14:35:19,214 | INFO     | -- intersect: 35780115542.09845
[2025-07-23 10:35:52] 2025-07-23 14:35:19,214 | INFO     | intersect: 35780115542.09845
[2025-07-23 10:35:52] 2025-07-23 14:35:19,215 | INFO     | chi2: 0.6299472890864398
[2025-07-23 10:35:52] 2025-07-23 14:35:19,215 | INFO     | current chi2=0.6299472890864398 (change=70.2462581747634 %)
[2025-07-23 10:35:52] 2025-07-23 14:35:19,216 | INFO     | sum of square deviations: 3822136780.0
[2025-07-23 10:35:52] 2025-07-23 14:35:19,217 | INFO     | sum of deviations: -80222123641.00003
[2025-07-23 10:35:52] 2025-07-23 14:35:19,217 | INFO     | mean x: 1753274231.0
[2025-07-23 10:35:52] 2025-07-23 14:35:19,217 | INFO     | mean y: 2361224.8051948054
[2025-07-23 10:35:52] 2025-07-23 14:35:19,218 | INFO     | -- intersect: 36801510557.14835
[2025-07-23 10:35:52] 2025-07-23 14:35:19,218 | INFO     | intersect: 36801510557.14835
[2025-07-23 10:35:52] 2025-07-23 14:35:19,218 | INFO     | chi2: 0.577025677391526
[2025-07-23 10:35:52] 2025-07-23 14:35:19,218 | INFO     | current chi2=0.577025677391526 (change=8.400958716984345 %)
[2025-07-23 10:35:52] 2025-07-23 14:35:19,218 | INFO     | left removable region: 20
[2025-07-23 10:35:52] 2025-07-23 14:35:19,219 | INFO     | sum of square deviations: 3081657780.0
[2025-07-23 10:35:52] 2025-07-23 14:35:19,220 | INFO     | sum of deviations: -51380825027.00001
[2025-07-23 10:35:52] 2025-07-23 14:35:19,220 | INFO     | mean x: 1753274353.0
[2025-07-23 10:35:52] 2025-07-23 14:35:19,220 | INFO     | mean y: 2346876.4093023255
[2025-07-23 10:35:52] 2025-07-23 14:35:19,220 | INFO     | -- intersect: 29234886368.779427
[2025-07-23 10:35:52] 2025-07-23 14:35:19,221 | INFO     | intersect: 29234886368.779427
[2025-07-23 10:35:52] 2025-07-23 14:35:19,221 | INFO     | chi2: 0.47965389357073585
[2025-07-23 10:35:52] 2025-07-23 14:35:19,221 | INFO     | -- intersect: 29234886368.779427
[2025-07-23 10:35:52] 2025-07-23 14:35:19,221 | INFO     | current memory leak: -16.67 B/s (using 215 data points, chi2=0.48)
[2025-07-23 10:35:52] 2025-07-23 14:35:19,222 | INFO     | could have reported an average CPU frequency of 2628 MHz (12 samples)
[2025-07-23 10:35:52] 2025-07-23 14:35:19,222 | INFO     | ..............................
[2025-07-23 10:35:52] 2025-07-23 14:35:19,222 | INFO     | . Timing measurements:
[2025-07-23 10:35:52] 2025-07-23 14:35:19,222 | INFO     | . get job = 0 s
[2025-07-23 10:35:52] 2025-07-23 14:35:19,222 | INFO     | . initial setup = 2 s
[2025-07-23 10:35:52] 2025-07-23 14:35:19,222 | INFO     | . payload setup = 6 s
[2025-07-23 10:35:52] 2025-07-23 14:35:19,222 | INFO     | . stage-in = 0 s
[2025-07-23 10:35:52] 2025-07-23 14:35:19,223 | INFO     | . payload execution = 14704 s
[2025-07-23 10:35:52] 2025-07-23 14:35:19,223 | INFO     | . stage-out = 2 s
[2025-07-23 10:35:52] 2025-07-23 14:35:19,223 | INFO     | . log creation = 0 s
[2025-07-23 10:35:52] 2025-07-23 14:35:19,223 | INFO     | ..............................
[2025-07-23 10:35:52] 2025-07-23 14:35:19,327 | INFO     | 
[2025-07-23 10:35:52] 2025-07-23 14:35:19,327 | INFO     | job summary report
[2025-07-23 10:35:52] 2025-07-23 14:35:19,327 | INFO     | --------------------------------------------------
[2025-07-23 10:35:52] 2025-07-23 14:35:19,327 | INFO     | PanDA job id: 6743006201
[2025-07-23 10:35:52] 2025-07-23 14:35:19,327 | INFO     | task id: 45697541
[2025-07-23 10:35:52] 2025-07-23 14:35:19,327 | INFO     | errors: (none)
[2025-07-23 10:35:52] 2025-07-23 14:35:19,328 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-23 10:35:52] 2025-07-23 14:35:19,328 | INFO     | pilot state: finished 
[2025-07-23 10:35:52] 2025-07-23 14:35:19,328 | INFO     | transexitcode: 0
[2025-07-23 10:35:52] 2025-07-23 14:35:19,328 | INFO     | exeerrorcode: 0
[2025-07-23 10:35:52] 2025-07-23 14:35:19,328 | INFO     | exeerrordiag: 
[2025-07-23 10:35:52] 2025-07-23 14:35:19,328 | INFO     | exitcode: 0
[2025-07-23 10:35:52] 2025-07-23 14:35:19,328 | INFO     | exitmsg: OK
[2025-07-23 10:35:52] 2025-07-23 14:35:19,328 | INFO     | cpuconsumptiontime: 74960 s
[2025-07-23 10:35:52] 2025-07-23 14:35:19,328 | INFO     | nevents: 400
[2025-07-23 10:35:52] 2025-07-23 14:35:19,328 | INFO     | neventsw: 0
[2025-07-23 10:35:52] 2025-07-23 14:35:19,329 | INFO     | pid: 695777
[2025-07-23 10:35:52] 2025-07-23 14:35:19,329 | INFO     | pgrp: 695777
[2025-07-23 10:35:52] 2025-07-23 14:35:19,329 | INFO     | corecount: 10
[2025-07-23 10:35:52] 2025-07-23 14:35:19,329 | INFO     | event service: False
[2025-07-23 10:35:52] 2025-07-23 14:35:19,329 | INFO     | sizes: {0: 2397514, 4: 2397776, 11: 2397804, 14714: 2428595, 14717: 2437649, 14724: 2437787}
[2025-07-23 10:35:52] 2025-07-23 14:35:19,329 | INFO     | --------------------------------------------------
[2025-07-23 10:35:52] 2025-07-23 14:35:19,329 | INFO     | 
[2025-07-23 10:35:52] 2025-07-23 14:35:19,329 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-07-23 10:35:52] 2025-07-23 14:35:19,351 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-23 10:35:52] 2025-07-23 14:35:19,351 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-23 10:35:52] 2025-07-23 14:35:19,351 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-23 10:35:52] 2025-07-23 14:35:19,351 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-23 10:35:52] 2025-07-23 14:35:19,351 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-23 10:35:52] 2025-07-23 14:35:19,351 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-23 10:35:52] 2025-07-23 14:35:19,351 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-23 10:35:52] 2025-07-23 14:35:19,352 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-23 10:35:52] 2025-07-23 14:35:19,352 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-23 10:35:52] 2025-07-23 14:35:19,352 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-23 10:35:52] 2025-07-23 14:35:19,352 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-23 10:35:52] 2025-07-23 14:35:19,352 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-23 10:35:52] 2025-07-23 14:35:19,352 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-23 10:35:52] 2025-07-23 14:35:19,352 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-23 10:35:52] 2025-07-23 14:35:19,352 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-23 10:35:52] 2025-07-23 14:35:19,352 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-23 10:35:52] 2025-07-23 14:35:19,352 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-23 10:35:52] 2025-07-23 14:35:19,353 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-23 10:35:52] 2025-07-23 14:35:19,353 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-23 10:35:52] 2025-07-23 14:35:19,353 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-23 10:35:52] 2025-07-23 14:35:19,353 | INFO     | job 6743006201 has completed (purged errors)
[2025-07-23 10:35:52] 2025-07-23 14:35:19,353 | INFO     | overall cleanup function is called
[2025-07-23 10:35:52] 2025-07-23 14:35:20,361 | INFO     | --- collectZombieJob: --- 10, [695777]
[2025-07-23 10:35:52] 2025-07-23 14:35:20,362 | INFO     | zombie collector waiting for pid 695777
[2025-07-23 10:35:52] 2025-07-23 14:35:20,362 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-23 10:35:52] 2025-07-23 14:35:20,362 | INFO     | collected zombie processes
[2025-07-23 10:35:52] 2025-07-23 14:35:20,362 | INFO     | will attempt to kill all subprocesses of pid=695777
[2025-07-23 10:35:52] 2025-07-23 14:35:20,673 | INFO     | process IDs to be killed: [695777] (in reverse order)
[2025-07-23 10:35:52] 2025-07-23 14:35:20,760 | WARNING  | found no corresponding commands to process id(s)
[2025-07-23 10:35:52] 2025-07-23 14:35:20,760 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-23 10:35:52] 2025-07-23 14:35:20,781 | INFO     | did not find any defunct processes belonging to 695777
[2025-07-23 10:35:52] 2025-07-23 14:35:20,792 | INFO     | did not find any defunct processes belonging to 695777
[2025-07-23 10:35:52] 2025-07-23 14:35:20,792 | INFO     | ready for new job
[2025-07-23 10:35:52] 2025-07-23 14:35:20,792 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-23 10:35:52] 2025-07-23 14:35:20,794 | INFO     | ***************************************
[2025-07-23 10:35:52] 2025-07-23 14:35:20,794 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-23 10:35:52] 2025-07-23 14:35:20,794 | INFO     | ***************************************
[2025-07-23 10:35:52] 2025-07-23 14:35:20,794 | INFO     | 
[2025-07-23 10:35:52] 2025-07-23 14:35:20,813 | INFO     | architecture information:
[2025-07-23 10:35:52] 2025-07-23 14:35:20,814 | INFO     | executing command: cat /etc/os-release
[2025-07-23 10:35:52] 2025-07-23 14:35:20,857 | INFO     | cat /etc/os-release:
[2025-07-23 10:35:52] NAME="CentOS Linux"
[2025-07-23 10:35:52] VERSION="7 (Core)"
[2025-07-23 10:35:52] ID="centos"
[2025-07-23 10:35:52] ID_LIKE="rhel fedora"
[2025-07-23 10:35:52] VERSION_ID="7"
[2025-07-23 10:35:52] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-23 10:35:52] ANSI_COLOR="0;31"
[2025-07-23 10:35:52] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-23 10:35:52] HOME_URL="https://www.centos.org/"
[2025-07-23 10:35:52] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-23 10:35:52] 
[2025-07-23 10:35:52] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-23 10:35:52] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-23 10:35:52] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-23 10:35:52] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-23 10:35:52] 
[2025-07-23 10:35:52] 2025-07-23 14:35:20,857 | INFO     | ***************************************
[2025-07-23 10:35:52] 2025-07-23 14:35:21,360 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-07-23 10:35:52] 2025-07-23 14:35:21,389 | INFO     | sufficient remaining disk space (76222038016 B)
[2025-07-23 10:35:52] 2025-07-23 14:35:21,390 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-23 10:35:52] 2025-07-23 14:35:21,390 | INFO     | current server update state: UPDATING_FINAL
[2025-07-23 10:35:52] 2025-07-23 14:35:21,390 | INFO     | update_server=False
[2025-07-23 10:35:52] 2025-07-23 14:35:21,390 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-23 10:35:52] 2025-07-23 14:35:21,390 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-23 10:35:52] 2025-07-23 14:35:21,390 | INFO     | aborting loop
[2025-07-23 10:35:52] 2025-07-23 14:35:21,604 | INFO     | all job control threads have been joined
[2025-07-23 10:35:52] 2025-07-23 14:35:21,944 | INFO     | all data control threads have been joined
[2025-07-23 10:35:52] 2025-07-23 14:35:22,098 | INFO     | all payload control threads have been joined
[2025-07-23 10:35:52] 2025-07-23 14:35:22,396 | INFO     | [job] retrieve thread has finished
[2025-07-23 10:35:52] 2025-07-23 14:35:22,396 | INFO     | [job] job monitor thread has finished
[2025-07-23 10:35:52] 2025-07-23 14:35:22,420 | INFO     | [payload] failed_post thread has finished
[2025-07-23 10:35:52] 2025-07-23 14:35:22,609 | INFO     | [job] control thread has finished
[2025-07-23 10:35:52] 2025-07-23 14:35:22,651 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-23 10:35:52] 2025-07-23 14:35:22,949 | INFO     | [data] control thread has finished
[2025-07-23 10:35:52] 2025-07-23 14:35:23,086 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-23 10:35:52] 2025-07-23 14:35:23,104 | INFO     | [payload] control thread has finished
[2025-07-23 10:35:52] 2025-07-23 14:35:23,228 | INFO     | [job] create_data_payload thread has finished
[2025-07-23 10:35:52] 2025-07-23 14:35:23,345 | INFO     | [job] validate thread has finished
[2025-07-23 10:35:52] 2025-07-23 14:35:23,348 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-23 10:35:52] 2025-07-23 14:35:23,353 | INFO     | [data] copytool_in thread has finished
[2025-07-23 10:35:52] 2025-07-23 14:35:23,364 | INFO     | [payload] validate_post thread has finished
[2025-07-23 10:35:52] 2025-07-23 14:35:23,447 | INFO     | [payload] validate_pre thread has finished
[2025-07-23 10:35:52] 2025-07-23 14:35:23,711 | INFO     | [payload] execute_payloads thread has finished
[2025-07-23 10:35:52] 2025-07-23 14:35:24,340 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-23 10:35:52] 2025-07-23 14:35:24,658 | INFO     | [data] copytool_out thread has finished
[2025-07-23 10:35:52] 2025-07-23 14:35:25,347 | INFO     | [job] queue monitor thread has finished
[2025-07-23 10:35:52] 2025-07-23 14:35:27,096 | INFO     | [data] queue_monitor thread has finished
[2025-07-23 10:35:52] 2025-07-23 14:35:28,471 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140351543781184)>', '<ExcThread(monitor, started 140350446356224)>']
[2025-07-23 10:35:52] 2025-07-23 14:35:33,496 | INFO     | all workflow threads have been joined
[2025-07-23 10:35:52] 2025-07-23 14:35:33,496 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-23 10:35:52] 2025-07-23 14:35:33,496 | INFO     | traces error code: 0
[2025-07-23 10:35:52] 2025-07-23 14:35:33,497 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-23 10:35:52] 2025-07-23 14:35:51,740 | INFO     | PID=689254 has CPU usage=2.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-07-23 10:35:52] 2025-07-23 14:35:51,741 | INFO     | .. there are 20 such processes running
[2025-07-23 10:35:52] 2025-07-23 14:35:51,742 | INFO     | found 0 job(s) in 20 queues
[2025-07-23 10:35:52] 2025-07-23 14:35:51,742 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-23 10:35:52] 2025-07-23 14:35:51,742 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-23 10:35:52] 2025-07-23 14:35:51,742 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-23 10:35:52] 2025-07-23 14:35:51,742 | INFO     | [monitor] control thread has ended
[2025-07-23 10:35:52] 2025-07-23 14:35:51,931 [wrapper] ==== pilot stdout END ====
[2025-07-23 10:35:52] 2025-07-23 14:35:51,965 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-23 10:35:52] 2025-07-23 14:35:51,997 [wrapper] pilotpid: 689254
[2025-07-23 10:35:52] 2025-07-23 14:35:52,025 [wrapper] Pilot exit status: 0
[2025-07-23 10:35:52] 2025-07-23 14:35:52,060 [wrapper] pandaids: 6743006201
[2025-07-23 10:35:52] 2025-07-23 14:35:52,118 [wrapper] cleanup supervisor_pilot 1249103 689255
[2025-07-23 10:35:52] 2025-07-23 14:35:52,122 [wrapper] Test setup, not cleaning
[2025-07-23 10:35:52] 2025-07-23 14:35:52,125 [wrapper] apfmon messages muted
[2025-07-23 10:35:52] 2025-07-23 14:35:52,128 [wrapper] ==== wrapper stdout END ====
[2025-07-23 10:35:52] 2025-07-23 14:35:52,131 [wrapper] ==== wrapper stderr END ====
[2025-07-23 10:35:52]  *** Error codes and diagnostics ***
[2025-07-23 10:35:52]     "exeErrorCode": 0,
[2025-07-23 10:35:52]     "exeErrorDiag": "",
[2025-07-23 10:35:52]     "pilotErrorCode": 0,
[2025-07-23 10:35:52]     "pilotErrorDiag": "",
[2025-07-23 10:35:52]  *** Listing of results directory ***
[2025-07-23 10:35:52] total 636228
[2025-07-23 10:35:52] -rw-r--r--. 1 boincer umatlas    530466 Jul 22 22:25 pilot3.tar.gz
[2025-07-23 10:35:52] -rw-r--r--. 1 boincer umatlas      5112 Jul 22 22:55 queuedata.json
[2025-07-23 10:35:52] -rwx------. 1 boincer umatlas     36292 Jul 22 22:56 runpilot2-wrapper.sh
[2025-07-23 10:35:52] -rw-r--r--. 1 boincer umatlas       100 Jul 23 06:29 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-23 10:35:52] -rwxr-xr-x. 1 boincer umatlas      7986 Jul 23 06:29 run_atlas
[2025-07-23 10:35:52] -rw-r--r--. 1 boincer umatlas       105 Jul 23 06:29 job.xml
[2025-07-23 10:35:52] -rw-r--r--. 2 boincer umatlas 341904326 Jul 23 06:29 EVNT.45697539._000158.pool.root.1
[2025-07-23 10:35:52] -rw-r--r--. 2 boincer umatlas     15095 Jul 23 06:29 start_atlas.sh
[2025-07-23 10:35:52] drwxrwx--x. 2 boincer umatlas      4096 Jul 23 06:29 shared
[2025-07-23 10:35:52] -rw-r--r--. 2 boincer umatlas    542899 Jul 23 06:29 input.tar.gz
[2025-07-23 10:35:52] -rw-r--r--. 1 boincer umatlas         0 Jul 23 06:29 boinc_lockfile
[2025-07-23 10:35:52] -rw-r--r--. 1 boincer umatlas      2601 Jul 23 06:29 pandaJob.out
[2025-07-23 10:35:52] -rw-------. 1 boincer umatlas    978437 Jul 23 06:29 agis_schedconf.cvmfs.json
[2025-07-23 10:35:52] drwx------. 4 boincer umatlas      4096 Jul 23 06:29 pilot3
[2025-07-23 10:35:52] -rw-r--r--. 1 boincer umatlas      6657 Jul 23 10:31 init_data.xml
[2025-07-23 10:35:52] -rw-------. 1 boincer umatlas 302199112 Jul 23 10:34 HITS.45697541._004780.pool.root.1
[2025-07-23 10:35:52] -rw-r--r--. 1 boincer umatlas       531 Jul 23 10:34 boinc_task_state.xml
[2025-07-23 10:35:52] -rw-------. 1 boincer umatlas      1040 Jul 23 10:35 memory_monitor_summary.json
[2025-07-23 10:35:52] -rw-------. 1 boincer umatlas   1593041 Jul 23 10:35 agis_ddmendpoints.agis.ALL.json
[2025-07-23 10:35:52] -rw-------. 1 boincer umatlas    424330 Jul 23 10:35 log.45697541._004780.job.log.tgz.1
[2025-07-23 10:35:52] -rw-------. 1 boincer umatlas      7814 Jul 23 10:35 heartbeat.json
[2025-07-23 10:35:52] -rw-r--r--. 1 boincer umatlas      8192 Jul 23 10:35 boinc_mmap_file
[2025-07-23 10:35:52] -rw-r--r--. 1 boincer umatlas        28 Jul 23 10:35 wrapper_checkpoint.txt
[2025-07-23 10:35:52] -rw-------. 1 boincer umatlas        95 Jul 23 10:35 pilot_heartbeat.json
[2025-07-23 10:35:52] -rw-------. 1 boincer umatlas       822 Jul 23 10:35 pilotlog.txt
[2025-07-23 10:35:52] -rw-------. 1 boincer umatlas   1336349 Jul 23 10:35 log.45697541._004780.job.log.1
[2025-07-23 10:35:52] -rw-------. 1 boincer umatlas       357 Jul 23 10:35 output.list
[2025-07-23 10:35:52] -rw-r--r--. 1 boincer umatlas       620 Jul 23 10:35 runtime_log
[2025-07-23 10:35:52] -rw-------. 1 boincer umatlas   1781760 Jul 23 10:35 result.tar.gz
[2025-07-23 10:35:52] -rw-r--r--. 1 boincer umatlas      8648 Jul 23 10:35 runtime_log.err
[2025-07-23 10:35:52] -rw-------. 1 boincer umatlas       655 Jul 23 10:35 Eo6NDmFqey7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDm3iKLDmxTYSNm.diag
[2025-07-23 10:35:52] -rw-r--r--. 1 boincer umatlas     21217 Jul 23 10:35 stderr.txt
[2025-07-23 10:35:52] HITS file was successfully produced:
[2025-07-23 10:35:52] -rw-------. 1 boincer umatlas 302199112 Jul 23 10:34 shared/HITS.pool.root.1
[2025-07-23 10:35:52]  *** Contents of shared directory: ***
[2025-07-23 10:35:52] total 631304
[2025-07-23 10:35:52] -rw-r--r--. 2 boincer umatlas 341904326 Jul 23 06:29 ATLAS.root_0
[2025-07-23 10:35:52] -rw-r--r--. 2 boincer umatlas     15095 Jul 23 06:29 start_atlas.sh
[2025-07-23 10:35:52] -rw-r--r--. 2 boincer umatlas    542899 Jul 23 06:29 input.tar.gz
[2025-07-23 10:35:52] -rw-------. 1 boincer umatlas 302199112 Jul 23 10:34 HITS.pool.root.1
[2025-07-23 10:35:52] -rw-------. 1 boincer umatlas   1781760 Jul 23 10:35 result.tar.gz
10:35:54 (685674): run_atlas exited; CPU time 75176.172097
10:35:54 (685674): called boinc_finish(0)

</stderr_txt>
]]>

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