Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
02:49:59 (623599): wrapper (7.7.26015): starting
02:49:59 (623599): wrapper: running run_atlas (--nthreads 12)
[2025-07-23 02:49:59] Arguments: --nthreads 12
[2025-07-23 02:49:59] Threads: 12
[2025-07-23 02:49:59] Checking for CVMFS
[2025-07-23 02:50:00] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-23 02:50:00] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-23 02:50:00] Running cvmfs_config stat atlas.cern.ch
[2025-07-23 02:50:02] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-23 02:50:02] 2.11.5.0 6468 31229 313516 148653 0 368 42206449 45568000 24844 130560 0 252128310 99.777 161041094 26522 http://cvmfs-s1bnl.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://206.12.9.162:3129 1
[2025-07-23 02:50:02] CVMFS is ok
[2025-07-23 02:50:02] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-07-23 02:50:02] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-07-23 02:50:02] Further information can be found at the LHC@home message board.
[2025-07-23 02:50:02] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-23 02:50:02] Checking for apptainer binary...
[2025-07-23 02:50:02] Using apptainer found in PATH at /usr/bin/apptainer
[2025-07-23 02:50:02] Running /usr/bin/apptainer --version
[2025-07-23 02:50:02] apptainer version 1.4.1-1.el9
[2025-07-23 02:50:02] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-23 02:50:03] wns0074.triumf.lcg
[2025-07-23 02:50:03] apptainer works
[2025-07-23 02:50:04] Set ATHENA_PROC_NUMBER=12
[2025-07-23 02:50:04] Set ATHENA_CORE_NUMBER=12
[2025-07-23 02:50:04] Starting ATLAS job with PandaID=6741873940
[2025-07-23 02:50:04] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-23 02:56:59]  *** The last 200 lines of the pilot log: ***
[2025-07-23 02:56:59] 2025-07-23 09:56:24,156 | INFO     | extracted standard memory fields from prmon json
[2025-07-23 02:56:59] 2025-07-23 09:56:24,156 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-23 02:56:59] 2025-07-23 09:56:24,156 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-23 02:56:59] 2025-07-23 09:56:24,156 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-23 02:56:59] 2025-07-23 09:56:24,157 | WARNING  | wrong length of table data, x=[1753264374.0, 1753264435.0], y=[2006.0, 0.0] (must be same and length>=4)
[2025-07-23 02:56:59] 2025-07-23 09:56:24,157 | INFO     | could have reported an average CPU frequency of 2628 MHz (4 samples)
[2025-07-23 02:56:59] 2025-07-23 09:56:24,157 | INFO     | ..............................
[2025-07-23 02:56:59] 2025-07-23 09:56:24,157 | INFO     | . Timing measurements:
[2025-07-23 02:56:59] 2025-07-23 09:56:24,157 | INFO     | . get job = 0 s
[2025-07-23 02:56:59] 2025-07-23 09:56:24,157 | INFO     | . initial setup = 9 s
[2025-07-23 02:56:59] 2025-07-23 09:56:24,157 | INFO     | . payload setup = 37 s
[2025-07-23 02:56:59] 2025-07-23 09:56:24,157 | INFO     | . stage-in = 0 s
[2025-07-23 02:56:59] 2025-07-23 09:56:24,157 | INFO     | . payload execution = 89 s
[2025-07-23 02:56:59] 2025-07-23 09:56:24,157 | INFO     | . stage-out = 1 s
[2025-07-23 02:56:59] 2025-07-23 09:56:24,157 | INFO     | . log creation = 0 s
[2025-07-23 02:56:59] 2025-07-23 09:56:24,158 | INFO     | ..............................
[2025-07-23 02:56:59] 2025-07-23 09:56:24,158 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-07-23 02:56:59] 2025-07-23 09:56:24,158 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6741873940/pilotlog.txt
[2025-07-23 02:56:59] 2025-07-23 09:56:24,260 | WARNING  | detected the following tail of warning/fatal messages in the pilot log:
[2025-07-23 02:56:59] - Log from pilotlog.txt -
[2025-07-23 02:56:59] 2025-07-23 09:56:24,141 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6741873940/memory_monitor_summary.json (trf name=prmon)
[2025-07-23 02:56:59] 2025-07-23 09:56:24,156 | INFO     | extracted standard info from prmon json
[2025-07-23 02:56:59] 2025-07-23 09:56:24,156 | INFO     | extracted standard memory fields from prmon json
[2025-07-23 02:56:59] 2025-07-23 09:56:24,156 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-23 02:56:59] 2025-07-23 09:56:24,156 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-23 02:56:59] 2025-07-23 09:56:24,156 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-23 02:56:59] 2025-07-23 09:56:24,157 | WARNING  | wrong length of table data, x=[1753264374.0, 1753264435.0], y=[2006.0, 0.0] (must be same and length>=4)
[2025-07-23 02:56:59] 2025-07-23 09:56:24,157 | INFO     | could have reported an average CPU frequency of 2628 MHz (4 samples)
[2025-07-23 02:56:59] 2025-07-23 09:56:24,157 | INFO     | ..............................
[2025-07-23 02:56:59] 2025-07-23 09:56:24,157 | INFO     | . Timing measurements:
[2025-07-23 02:56:59] 2025-07-23 09:56:24,157 | INFO     | . get job = 0 s
[2025-07-23 02:56:59] 2025-07-23 09:56:24,157 | INFO     | . initial setup = 9 s
[2025-07-23 02:56:59] 2025-07-23 09:56:24,157 | INFO     | . payload setup = 37 s
[2025-07-23 02:56:59] 2025-07-23 09:56:24,157 | INFO     | . stage-in = 0 s
[2025-07-23 02:56:59] 2025-07-23 09:56:24,157 | INFO     | . payload execution = 89 s
[2025-07-23 02:56:59] 2025-07-23 09:56:24,157 | INFO     | . stage-out = 1 s
[2025-07-23 02:56:59] 2025-07-23 09:56:24,157 | INFO     | . log creation = 0 s
[2025-07-23 02:56:59] 2025-07-23 09:56:24,158 | INFO     | ..............................
[2025-07-23 02:56:59] 2025-07-23 09:56:24,158 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-07-23 02:56:59] 2025-07-23 09:56:24,158 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6741873940/pilotlog.txt
[2025-07-23 02:56:59] 2025-07-23 09:56:24,260 | WARNING  | 
[2025-07-23 02:56:59] [begin log extracts]
[2025-07-23 02:56:59] - Log from pilotlog.txt -
[2025-07-23 02:56:59] 2025-07-23 09:56:24,141 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6741873940/memory_monitor_summary.json (trf name=prmon)
[2025-07-23 02:56:59] 2025-07-23 09:56:24,156 | INFO     | extracted standard info from prmon json
[2025-07-23 02:56:59] 2025-07-23 09:56:24,156 | INFO     | extracted standard memory fields from prmon json
[2025-07-23 02:56:59] 2025-07-23 09:56:24,156 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-23 02:56:59] 2025-07-23 09:56:24,156 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-23 02:56:59] 2025-07-23 09:56:24,156 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-23 02:56:59] 2025-07-23 09:56:24,157 | WARNING  | wrong length of table data, x=[1753264374.0, 1753264435.0], y=[2006.0, 0.0] (must be same and length>=4)
[2025-07-23 02:56:59] 2025-07-23 09:56:24,157 | INFO     | could have reported an average CPU frequency of 2628 MHz (4 samples)
[2025-07-23 02:56:59] 2025-07-23 09:56:24,157 | INFO     | ..............................
[2025-07-23 02:56:59] 2025-07-23 09:56:24,157 | INFO     | . Timing measurements:
[2025-07-23 02:56:59] 2025-07-23 09:56:24,157 | INFO     | . get job = 0 s
[2025-07-23 02:56:59] 2025-07-23 09:56:24,157 | INFO     | . initial setup = 9 s
[2025-07-23 02:56:59] 2025-07-23 09:56:24,157 | INFO     | . payload setup = 37 s
[2025-07-23 02:56:59] 2025-07-23 09:56:24,157 | INFO     | . stage-in = 0 s
[2025-07-23 02:56:59] 2025-07-23 09:56:24,157 | INFO     | . payload execution = 89 s
[2025-07-23 02:56:59] 2025-07-23 09:56:24,157 | INFO     | . stage-out = 1 s
[2025-07-23 02:56:59] 2025-07-23 09:56:24,157 | INFO     | . log creation = 0 s
[2025-07-23 02:56:59] 2025-07-23 09:56:24,158 | INFO     | ..............................
[2025-07-23 02:56:59] 2025-07-23 09:56:24,158 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-07-23 02:56:59] 2025-07-23 09:56:24,158 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6741873940/pilotlog.txt
[2025-07-23 02:56:59] [end log extracts]
[2025-07-23 02:56:59] 2025-07-23 09:56:24,260 | WARNING  | pilotErrorCodes = [1305] (will report primary/first error code)
[2025-07-23 02:56:59] 2025-07-23 09:56:24,261 | WARNING  | pilotErrorDiags = ['Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return c
[2025-07-23 02:56:59] 2025-07-23 09:56:24,620 | INFO     | 
[2025-07-23 02:56:59] 2025-07-23 09:56:24,620 | INFO     | job summary report
[2025-07-23 02:56:59] 2025-07-23 09:56:24,620 | INFO     | --------------------------------------------------
[2025-07-23 02:56:59] 2025-07-23 09:56:24,620 | INFO     | PanDA job id: 6741873940
[2025-07-23 02:56:59] 2025-07-23 09:56:24,620 | INFO     | task id: 45697472
[2025-07-23 02:56:59] 2025-07-23 09:56:24,620 | INFO     | error 1/1: 1305: Failed to execute payload:PyJobTransforms.transform.execute 2025-07-23 02:53:48,074 CRITICAL Transform executor raised TransformValidationExceptio
[2025-07-23 02:56:59] 2025-07-23 09:56:24,620 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-23 02:56:59] 2025-07-23 09:56:24,620 | INFO     | pilot state: failed 
[2025-07-23 02:56:59] 2025-07-23 09:56:24,620 | INFO     | transexitcode: 65
[2025-07-23 02:56:59] 2025-07-23 09:56:24,620 | INFO     | exeerrorcode: 65
[2025-07-23 02:56:59] 2025-07-23 09:56:24,620 | INFO     | exeerrordiag: Non-zero return code from EVNTtoHITS (1)
[2025-07-23 02:56:59] 2025-07-23 09:56:24,621 | INFO     | exitcode: 65
[2025-07-23 02:56:59] 2025-07-23 09:56:24,621 | INFO     | exitmsg: Non-zero return code from EVNTtoHITS (1)
[2025-07-23 02:56:59] 2025-07-23 09:56:24,621 | INFO     | cpuconsumptiontime: 19 s
[2025-07-23 02:56:59] 2025-07-23 09:56:24,621 | INFO     | nevents: 0
[2025-07-23 02:56:59] 2025-07-23 09:56:24,621 | INFO     | neventsw: 0
[2025-07-23 02:56:59] 2025-07-23 09:56:24,621 | INFO     | pid: 640096
[2025-07-23 02:56:59] 2025-07-23 09:56:24,621 | INFO     | pgrp: 640096
[2025-07-23 02:56:59] 2025-07-23 09:56:24,621 | INFO     | corecount: 12
[2025-07-23 02:56:59] 2025-07-23 09:56:24,621 | INFO     | event service: False
[2025-07-23 02:56:59] 2025-07-23 09:56:24,621 | INFO     | sizes: {0: 2397360, 1: 2397388, 2: 2397587, 13: 2397587, 20: 2397905, 24: 2397933, 131: 2421332, 133: 2425624, 135: 2425652, 277: 2425818}
[2025-07-23 02:56:59] 2025-07-23 09:56:24,621 | INFO     | --------------------------------------------------
[2025-07-23 02:56:59] 2025-07-23 09:56:24,621 | INFO     | 
[2025-07-23 02:56:59] 2025-07-23 09:56:24,621 | INFO     | executing command: ls -lF /home/boinc/slots/0
[2025-07-23 02:56:59] 2025-07-23 09:56:24,797 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-23 02:56:59] 2025-07-23 09:56:24,797 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-23 02:56:59] 2025-07-23 09:56:24,797 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-23 02:56:59] 2025-07-23 09:56:24,797 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-23 02:56:59] 2025-07-23 09:56:24,798 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-23 02:56:59] 2025-07-23 09:56:24,798 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-23 02:56:59] 2025-07-23 09:56:24,798 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-23 02:56:59] 2025-07-23 09:56:24,798 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-23 02:56:59] 2025-07-23 09:56:24,798 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-23 02:56:59] 2025-07-23 09:56:24,798 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-23 02:56:59] 2025-07-23 09:56:24,798 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-23 02:56:59] 2025-07-23 09:56:24,798 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-23 02:56:59] 2025-07-23 09:56:24,798 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-23 02:56:59] 2025-07-23 09:56:24,798 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-23 02:56:59] 2025-07-23 09:56:24,798 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-23 02:56:59] 2025-07-23 09:56:24,798 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-23 02:56:59] 2025-07-23 09:56:24,798 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-23 02:56:59] 2025-07-23 09:56:24,798 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-23 02:56:59] 2025-07-23 09:56:24,798 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-23 02:56:59] 2025-07-23 09:56:24,798 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-23 02:56:59] 2025-07-23 09:56:24,798 | INFO     | job 6741873940 has completed (purged errors)
[2025-07-23 02:56:59] 2025-07-23 09:56:24,798 | INFO     | overall cleanup function is called
[2025-07-23 02:56:59] 2025-07-23 09:56:25,805 | INFO     | --- collectZombieJob: --- 10, [640096]
[2025-07-23 02:56:59] 2025-07-23 09:56:25,805 | INFO     | zombie collector waiting for pid 640096
[2025-07-23 02:56:59] 2025-07-23 09:56:25,805 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-23 02:56:59] 2025-07-23 09:56:25,805 | INFO     | collected zombie processes
[2025-07-23 02:56:59] 2025-07-23 09:56:25,805 | INFO     | will attempt to kill all subprocesses of pid=640096
[2025-07-23 02:56:59] 2025-07-23 09:56:26,882 | INFO     | process IDs to be killed: [640096] (in reverse order)
[2025-07-23 02:56:59] 2025-07-23 09:56:27,223 | WARNING  | found no corresponding commands to process id(s)
[2025-07-23 02:56:59] 2025-07-23 09:56:27,223 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-23 02:56:59] 2025-07-23 09:56:27,259 | INFO     | did not find any defunct processes belonging to 640096
[2025-07-23 02:56:59] 2025-07-23 09:56:27,324 | INFO     | did not find any defunct processes belonging to 640096
[2025-07-23 02:56:59] 2025-07-23 09:56:27,324 | INFO     | ready for new job
[2025-07-23 02:56:59] 2025-07-23 09:56:27,325 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-23 02:56:59] 2025-07-23 09:56:27,326 | INFO     | ***************************************
[2025-07-23 02:56:59] 2025-07-23 09:56:27,326 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-23 02:56:59] 2025-07-23 09:56:27,326 | INFO     | ***************************************
[2025-07-23 02:56:59] 2025-07-23 09:56:27,326 | INFO     | 
[2025-07-23 02:56:59] 2025-07-23 09:56:27,328 | INFO     | architecture information:
[2025-07-23 02:56:59] 2025-07-23 09:56:27,349 | INFO     | executing command: cat /etc/os-release
[2025-07-23 02:56:59] 2025-07-23 09:56:27,377 | INFO     | cat /etc/os-release:
[2025-07-23 02:56:59] NAME="CentOS Linux"
[2025-07-23 02:56:59] VERSION="7 (Core)"
[2025-07-23 02:56:59] ID="centos"
[2025-07-23 02:56:59] ID_LIKE="rhel fedora"
[2025-07-23 02:56:59] VERSION_ID="7"
[2025-07-23 02:56:59] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-23 02:56:59] ANSI_COLOR="0;31"
[2025-07-23 02:56:59] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-23 02:56:59] HOME_URL="https://www.centos.org/"
[2025-07-23 02:56:59] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-23 02:56:59] 
[2025-07-23 02:56:59] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-23 02:56:59] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-23 02:56:59] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-23 02:56:59] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-23 02:56:59] 
[2025-07-23 02:56:59] 2025-07-23 09:56:27,377 | INFO     | ***************************************
[2025-07-23 02:56:59] 2025-07-23 09:56:27,881 | INFO     | executing command: df -mP /home/boinc/slots/0
[2025-07-23 02:56:59] 2025-07-23 09:56:27,930 | INFO     | sufficient remaining disk space (1852998418432 B)
[2025-07-23 02:56:59] 2025-07-23 09:56:27,930 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-23 02:56:59] 2025-07-23 09:56:27,931 | INFO     | current server update state: UPDATING_FINAL
[2025-07-23 02:56:59] 2025-07-23 09:56:27,931 | INFO     | update_server=False
[2025-07-23 02:56:59] 2025-07-23 09:56:27,931 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-23 02:56:59] 2025-07-23 09:56:27,932 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-23 02:56:59] 2025-07-23 09:56:27,932 | INFO     | aborting loop
[2025-07-23 02:56:59] 2025-07-23 09:56:27,943 | INFO     | all payload control threads have been joined
[2025-07-23 02:56:59] 2025-07-23 09:56:27,947 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-23 02:56:59] 2025-07-23 09:56:28,458 | INFO     | all data control threads have been joined
[2025-07-23 02:56:59] 2025-07-23 09:56:28,810 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-23 02:56:59] 2025-07-23 09:56:28,937 | INFO     | [job] retrieve thread has finished
[2025-07-23 02:56:59] 2025-07-23 09:56:28,938 | INFO     | [job] job monitor thread has finished
[2025-07-23 02:56:59] 2025-07-23 09:56:28,949 | INFO     | [payload] control thread has finished
[2025-07-23 02:56:59] 2025-07-23 09:56:29,051 | INFO     | [data] copytool_in thread has finished
[2025-07-23 02:56:59] 2025-07-23 09:56:29,086 | INFO     | [payload] validate_post thread has finished
[2025-07-23 02:56:59] 2025-07-23 09:56:29,238 | INFO     | [job] create_data_payload thread has finished
[2025-07-23 02:56:59] 2025-07-23 09:56:29,465 | INFO     | [data] control thread has finished
[2025-07-23 02:56:59] 2025-07-23 09:56:29,496 | INFO     | [job] validate thread has finished
[2025-07-23 02:56:59] 2025-07-23 09:56:29,558 | INFO     | all job control threads have been joined
[2025-07-23 02:56:59] 2025-07-23 09:56:29,663 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-23 02:56:59] 2025-07-23 09:56:29,690 | INFO     | [payload] execute_payloads thread has finished
[2025-07-23 02:56:59] 2025-07-23 09:56:29,923 | INFO     | [payload] failed_post thread has finished
[2025-07-23 02:56:59] 2025-07-23 09:56:29,954 | INFO     | [data] copytool_out thread has finished
[2025-07-23 02:56:59] 2025-07-23 09:56:30,213 | INFO     | [payload] validate_pre thread has finished
[2025-07-23 02:56:59] 2025-07-23 09:56:30,344 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-23 02:56:59] 2025-07-23 09:56:30,564 | INFO     | [job] control thread has finished
[2025-07-23 02:56:59] 2025-07-23 09:56:30,669 | INFO     | [job] queue monitor thread has finished
[2025-07-23 02:56:59] 2025-07-23 09:56:32,819 | INFO     | [data] queue_monitor thread has finished
[2025-07-23 02:56:59] 2025-07-23 09:56:33,388 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140033884763968)>', '<ExcThread(monitor, started 140033491191552)>']
[2025-07-23 02:56:59] 2025-07-23 09:56:38,415 | INFO     | all workflow threads have been joined
[2025-07-23 02:56:59] 2025-07-23 09:56:38,415 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-23 02:56:59] 2025-07-23 09:56:38,417 | INFO     | traces error code: 0
[2025-07-23 02:56:59] 2025-07-23 09:56:38,417 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-23 02:56:59] 2025-07-23 09:56:57,113 | INFO     | PID=627470 has CPU usage=1.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-07-23 02:56:59] 2025-07-23 09:56:57,113 | INFO     | .. there are 49 such processes running
[2025-07-23 02:56:59] 2025-07-23 09:56:57,114 | INFO     | found 0 job(s) in 20 queues
[2025-07-23 02:56:59] 2025-07-23 09:56:57,114 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-23 02:56:59] 2025-07-23 09:56:57,114 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-23 02:56:59] 2025-07-23 09:56:57,114 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-23 02:56:59] 2025-07-23 09:56:57,114 | INFO     | [monitor] control thread has ended
[2025-07-23 02:56:59] 2025-07-23 09:56:57,933 [wrapper] ==== pilot stdout END ====
[2025-07-23 02:56:59] 2025-07-23 09:56:57,974 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-23 02:56:59] 2025-07-23 09:56:57,987 [wrapper] pilotpid: 627470
[2025-07-23 02:56:59] 2025-07-23 09:56:58,006 [wrapper] Pilot exit status: 0
[2025-07-23 02:56:59] 2025-07-23 09:56:58,104 [wrapper] pandaids: 6741873940
[2025-07-23 02:56:59] 2025-07-23 09:56:58,389 [wrapper] cleanup supervisor_pilot  627476 627471
[2025-07-23 02:56:59] 2025-07-23 09:56:58,414 [wrapper] Test setup, not cleaning
[2025-07-23 02:56:59] 2025-07-23 09:56:58,430 [wrapper] apfmon messages muted
[2025-07-23 02:56:59] 2025-07-23 09:56:58,445 [wrapper] ==== wrapper stdout END ====
[2025-07-23 02:56:59] 2025-07-23 09:56:58,459 [wrapper] ==== wrapper stderr END ====
[2025-07-23 02:56:59]  *** Error codes and diagnostics ***
[2025-07-23 02:56:59]     "exeErrorCode": 65,
[2025-07-23 02:56:59]     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (1)",
[2025-07-23 02:56:59]     "pilotErrorCode": 1305,
[2025-07-23 02:56:59]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (1)",
[2025-07-23 02:56:59]  *** Listing of results directory ***
[2025-07-23 02:56:59] total 329032
[2025-07-23 02:56:59] -rw-r--r--. 1 boinc boinc    530466 Jul 22 22:19 pilot3.tar.gz
[2025-07-23 02:56:59] -rw-r--r--. 1 boinc boinc      5112 Jul 22 23:11 queuedata.json
[2025-07-23 02:56:59] -rwx------. 1 boinc boinc     36292 Jul 22 23:13 runpilot2-wrapper.sh
[2025-07-23 02:56:59] -rw-r--r--. 1 boinc boinc       100 Jul 23 02:49 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-23 02:56:59] -rwxr-xr-x. 1 boinc boinc      7986 Jul 23 02:49 run_atlas
[2025-07-23 02:56:59] -rw-r--r--. 1 boinc boinc       105 Jul 23 02:49 job.xml
[2025-07-23 02:56:59] -rw-r--r--. 1 boinc boinc      6595 Jul 23 02:49 init_data.xml
[2025-07-23 02:56:59] -rw-r--r--. 2 boinc boinc 332848835 Jul 23 02:49 EVNT.45697470._000148.pool.root.1
[2025-07-23 02:56:59] -rw-r--r--. 2 boinc boinc     15095 Jul 23 02:49 start_atlas.sh
[2025-07-23 02:56:59] drwxrwx--x. 2 boinc boinc      4096 Jul 23 02:49 shared
[2025-07-23 02:56:59] -rw-r--r--. 2 boinc boinc    542905 Jul 23 02:49 input.tar.gz
[2025-07-23 02:56:59] -rw-r--r--. 1 boinc boinc         0 Jul 23 02:49 boinc_lockfile
[2025-07-23 02:56:59] -rw-r--r--. 1 boinc boinc      2612 Jul 23 02:50 pandaJob.out
[2025-07-23 02:56:59] -rw-------. 1 boinc boinc    978437 Jul 23 02:50 agis_schedconf.cvmfs.json
[2025-07-23 02:56:59] -rw-------. 1 boinc boinc   1593041 Jul 23 02:50 agis_ddmendpoints.agis.ALL.json
[2025-07-23 02:56:59] drwx------. 4 boinc boinc      4096 Jul 23 02:50 pilot3
[2025-07-23 02:56:59] -rw-r--r--. 1 boinc boinc       524 Jul 23 02:53 boinc_task_state.xml
[2025-07-23 02:56:59] -rw-------. 1 boinc boinc       977 Jul 23 02:53 memory_monitor_summary.json
[2025-07-23 02:56:59] -rw-------. 1 boinc boinc     22304 Jul 23 02:53 log.45697472._003117.job.log.tgz.1
[2025-07-23 02:56:59] -rw-------. 1 boinc boinc      8390 Jul 23 02:56 heartbeat.json
[2025-07-23 02:56:59] -rw-------. 1 boinc boinc        95 Jul 23 02:56 pilot_heartbeat.json
[2025-07-23 02:56:59] -rw-------. 1 boinc boinc       822 Jul 23 02:56 pilotlog.txt
[2025-07-23 02:56:59] -rw-r--r--. 1 boinc boinc        23 Jul 23 02:56 wrapper_checkpoint.txt
[2025-07-23 02:56:59] -rw-r--r--. 1 boinc boinc      8192 Jul 23 02:56 boinc_mmap_file
[2025-07-23 02:56:59] -rw-------. 1 boinc boinc     84892 Jul 23 02:56 log.45697472._003117.job.log.1
[2025-07-23 02:56:59] -rw-------. 1 boinc boinc       188 Jul 23 02:56 output.list
[2025-07-23 02:56:59] -rw-r--r--. 1 boinc boinc       620 Jul 23 02:56 runtime_log
[2025-07-23 02:56:59] -rw-------. 1 boinc boinc    122880 Jul 23 02:56 result.tar.gz
[2025-07-23 02:56:59] -rw-------. 1 boinc boinc       646 Jul 23 02:56 yZKMDmMuhy7n9Rq4apOajLDm4fhM0noT9bVof3QYDm3svKDm3Ub08m.diag
[2025-07-23 02:56:59] -rw-r--r--. 1 boinc boinc      8485 Jul 23 02:56 runtime_log.err
[2025-07-23 02:56:59] -rw-r--r--. 1 boinc boinc     21877 Jul 23 02:56 stderr.txt
[2025-07-23 02:56:59] No HITS result produced
[2025-07-23 02:56:59]  *** Contents of shared directory: ***
[2025-07-23 02:56:59] total 325720
[2025-07-23 02:56:59] -rw-r--r--. 2 boinc boinc 332848835 Jul 23 02:49 ATLAS.root_0
[2025-07-23 02:56:59] -rw-r--r--. 2 boinc boinc     15095 Jul 23 02:49 start_atlas.sh
[2025-07-23 02:56:59] -rw-r--r--. 2 boinc boinc    542905 Jul 23 02:49 input.tar.gz
[2025-07-23 02:56:59] -rw-------. 1 boinc boinc    122880 Jul 23 02:56 result.tar.gz
02:57:01 (623599): run_atlas exited; CPU time 32.500910
02:57:01 (623599): called boinc_finish(0)

</stderr_txt>
]]>

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