Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
17:19:12 (3926208): wrapper (7.7.26015): starting
17:19:12 (3926208): wrapper: running run_atlas (--nthreads 12)
[2025-07-23 17:19:12] Arguments: --nthreads 12
[2025-07-23 17:19:12] Threads: 12
[2025-07-23 17:19:12] Checking for CVMFS
[2025-07-23 17:19:12] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-23 17:19:12] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-23 17:19:12] Running cvmfs_config stat atlas.cern.ch
[2025-07-23 17:19:12] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-23 17:19:12] 2.13.1.0 8995 27276 251464 148663 2 57 36731221 46080001 6454 130560 0 247015000 99.906 62396915 23663 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://[2001:718:401:6025:1:0:2:0]:3128 1
[2025-07-23 17:19:12] CVMFS is ok
[2025-07-23 17:19:12] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-07-23 17:19:12] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-07-23 17:19:12] Further information can be found at the LHC@home message board.
[2025-07-23 17:19:12] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-23 17:19:12] Checking for apptainer binary...
[2025-07-23 17:19:12] Using apptainer found in PATH at /usr/bin/apptainer
[2025-07-23 17:19:12] Running /usr/bin/apptainer --version
[2025-07-23 17:19:12] apptainer version 1.4.1-1.el9
[2025-07-23 17:19:12] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-23 17:19:12] mff2103.farm.particle.cz
[2025-07-23 17:19:12] apptainer works
[2025-07-23 17:19:12] Set ATHENA_PROC_NUMBER=12
[2025-07-23 17:19:12] Set ATHENA_CORE_NUMBER=12
[2025-07-23 17:19:12] Starting ATLAS job with PandaID=6741871390
[2025-07-23 17:19:12] Running command: /usr/bin/apptainer exec -B /cvmfs,/scratch/.boinc/slots/8 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-23 18:50:40]  *** The last 200 lines of the pilot log: ***
[2025-07-23 18:50:40]  status=None
[2025-07-23 18:50:40]  status_code=0
[2025-07-23 18:50:40]  storage_token=
[2025-07-23 18:50:40]  surl=/scratch/.boinc/slots/8/PanDA_Pilot-6741871390/log.45697490._003795.job.log.tgz.1
[2025-07-23 18:50:40]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/72/12/log.45697490._003795.job.log.tgz.1
[2025-07-23 18:50:40]  workdir=None
[2025-07-23 18:50:40] ]
[2025-07-23 18:50:40] 2025-07-23 16:49:58,833 | INFO     | transferring file log.45697490._003795.job.log.tgz.1 from /scratch/.boinc/slots/8/PanDA_Pilot-6741871390/log.45697490._003795.job.log.tgz.1 to /scratch/.boinc/slot
[2025-07-23 18:50:40] 2025-07-23 16:49:58,833 | INFO     | executing command: /usr/bin/env mv /scratch/.boinc/slots/8/PanDA_Pilot-6741871390/log.45697490._003795.job.log.tgz.1 /scratch/.boinc/slots/8/log.45697490._003795.j
[2025-07-23 18:50:40] 2025-07-23 16:49:58,859 | INFO     | adding to output.list: log.45697490._003795.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/72/12/log.45697490._003795.job.log.tg
[2025-07-23 18:50:40] 2025-07-23 16:49:58,860 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-07-23 18:50:40] 2025-07-23 16:49:58,860 | INFO     | summary of transferred files:
[2025-07-23 18:50:40] 2025-07-23 16:49:58,863 | INFO     |  -- lfn=log.45697490._003795.job.log.tgz.1, status_code=0, status=transferred
[2025-07-23 18:50:40] 2025-07-23 16:49:58,864 | INFO     | stage-out finished correctly
[2025-07-23 18:50:40] 2025-07-23 16:49:59,142 | WARNING  | process 3937741 can no longer be monitored (due to stat problems) - aborting
[2025-07-23 18:50:40] 2025-07-23 16:49:59,143 | INFO     | using path: /scratch/.boinc/slots/8/PanDA_Pilot-6741871390/memory_monitor_summary.json (trf name=prmon)
[2025-07-23 18:50:40] 2025-07-23 16:49:59,498 | INFO     | number of running child processes to parent process 3937741: 1
[2025-07-23 18:50:40] 2025-07-23 16:49:59,498 | INFO     | maximum number of monitored processes: 6
[2025-07-23 18:50:40] 2025-07-23 16:49:59,934 | INFO     | PID=3930195 has CPU usage=13.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2025-07-23 18:50:40] 2025-07-23 16:49:59,934 | INFO     | .. there are 8 such processes running
[2025-07-23 18:50:40] 2025-07-23 16:50:01,251 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-07-23 18:50:40] 2025-07-23 16:50:02,002 | INFO     | monitor loop #386: job 0:6741871390 is in state 'finished'
[2025-07-23 18:50:40] 2025-07-23 16:50:02,002 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-23 18:50:40] 2025-07-23 16:50:02,317 | INFO     | job 6741871390 has state=finished
[2025-07-23 18:50:40] 2025-07-23 16:50:02,317 | INFO     | preparing for final server update for job 6741871390 in state='finished'
[2025-07-23 18:50:40] 2025-07-23 16:50:02,317 | INFO     | this job has now completed (state=finished)
[2025-07-23 18:50:40] 2025-07-23 16:50:02,318 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-07-23 18:50:40] 2025-07-23 16:50:02,318 | INFO     | log transfer has been attempted: DONE
[2025-07-23 18:50:40] 2025-07-23 16:50:02,318 | INFO     | job 6741871390 has finished - writing final server update
[2025-07-23 18:50:40] 2025-07-23 16:50:02,318 | INFO     | total number of processed events: 400 (read)
[2025-07-23 18:50:40] 2025-07-23 16:50:02,319 | INFO     | executing command: lscpu
[2025-07-23 18:50:40] 2025-07-23 16:50:02,399 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-07-23 18:50:40] 2025-07-23 16:50:02,941 | INFO     | 5439s have passed since pilot start - server update state is 'UPDATING_FINAL'
[2025-07-23 18:50:40] 2025-07-23 16:50:04,506 | INFO     | monitor loop #387: job 0:6741871390 is in state 'finished'
[2025-07-23 18:50:40] 2025-07-23 16:50:04,506 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-23 18:50:40] 2025-07-23 16:50:07,010 | INFO     | monitor loop #388: job 0:6741871390 is in state 'finished'
[2025-07-23 18:50:40] 2025-07-23 16:50:07,010 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-23 18:50:40] 2025-07-23 16:50:07,677 | INFO     | CPU arch script returned: x86-64-v3
[2025-07-23 18:50:40] 2025-07-23 16:50:07,692 | INFO     | found 48 cores (24 cores per socket, 2 sockets) HT, CPU MHz: 2750.0533437499994
[2025-07-23 18:50:40] 2025-07-23 16:50:07,710 | INFO     | using path: /scratch/.boinc/slots/8/PanDA_Pilot-6741871390/memory_monitor_summary.json (trf name=prmon)
[2025-07-23 18:50:40] 2025-07-23 16:50:07,711 | INFO     | extracted standard info from prmon json
[2025-07-23 18:50:40] 2025-07-23 16:50:07,711 | INFO     | extracted standard memory fields from prmon json
[2025-07-23 18:50:40] 2025-07-23 16:50:07,711 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-23 18:50:40] 2025-07-23 16:50:07,711 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-23 18:50:40] 2025-07-23 16:50:07,712 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-23 18:50:40] 2025-07-23 16:50:07,714 | INFO     | fitting pss+swap vs Time
[2025-07-23 18:50:40] 2025-07-23 16:50:07,714 | INFO     | sum of square deviations: 170944600.5
[2025-07-23 18:50:40] 2025-07-23 16:50:07,714 | INFO     | sum of deviations: 873757259.4999999
[2025-07-23 18:50:40] 2025-07-23 16:50:07,714 | INFO     | mean x: 1753286771.5
[2025-07-23 18:50:40] 2025-07-23 16:50:07,714 | INFO     | mean y: 2786958.8902439023
[2025-07-23 18:50:40] 2025-07-23 16:50:07,715 | INFO     | -- intersect: -8958871029.151575
[2025-07-23 18:50:40] 2025-07-23 16:50:07,715 | INFO     | intersect: -8958871029.151575
[2025-07-23 18:50:40] 2025-07-23 16:50:07,715 | INFO     | chi2: 0.006879320449109434
[2025-07-23 18:50:40] 2025-07-23 16:50:07,715 | INFO     | -- intersect: -8958871029.151575
[2025-07-23 18:50:40] 2025-07-23 16:50:07,715 | INFO     | current memory leak: 5.11 B/s (using 82 data points, chi2=0.01)
[2025-07-23 18:50:40] 2025-07-23 16:50:07,715 | INFO     | could have reported an average CPU frequency of 2756 MHz (6 samples)
[2025-07-23 18:50:40] 2025-07-23 16:50:07,716 | INFO     | ..............................
[2025-07-23 18:50:40] 2025-07-23 16:50:07,716 | INFO     | . Timing measurements:
[2025-07-23 18:50:40] 2025-07-23 16:50:07,716 | INFO     | . get job = 0 s
[2025-07-23 18:50:40] 2025-07-23 16:50:07,716 | INFO     | . initial setup = 1 s
[2025-07-23 18:50:40] 2025-07-23 16:50:07,716 | INFO     | . payload setup = 8 s
[2025-07-23 18:50:40] 2025-07-23 16:50:07,716 | INFO     | . stage-in = 0 s
[2025-07-23 18:50:40] 2025-07-23 16:50:07,716 | INFO     | . payload execution = 5403 s
[2025-07-23 18:50:40] 2025-07-23 16:50:07,716 | INFO     | . stage-out = 0 s
[2025-07-23 18:50:40] 2025-07-23 16:50:07,716 | INFO     | . log creation = 0 s
[2025-07-23 18:50:40] 2025-07-23 16:50:07,716 | INFO     | ..............................
[2025-07-23 18:50:40] 2025-07-23 16:50:08,299 | INFO     | 
[2025-07-23 18:50:40] 2025-07-23 16:50:08,300 | INFO     | job summary report
[2025-07-23 18:50:40] 2025-07-23 16:50:08,300 | INFO     | --------------------------------------------------
[2025-07-23 18:50:40] 2025-07-23 16:50:08,300 | INFO     | PanDA job id: 6741871390
[2025-07-23 18:50:40] 2025-07-23 16:50:08,300 | INFO     | task id: 45697490
[2025-07-23 18:50:40] 2025-07-23 16:50:08,300 | INFO     | errors: (none)
[2025-07-23 18:50:40] 2025-07-23 16:50:08,300 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-23 18:50:40] 2025-07-23 16:50:08,300 | INFO     | pilot state: finished 
[2025-07-23 18:50:40] 2025-07-23 16:50:08,300 | INFO     | transexitcode: 0
[2025-07-23 18:50:40] 2025-07-23 16:50:08,300 | INFO     | exeerrorcode: 0
[2025-07-23 18:50:40] 2025-07-23 16:50:08,300 | INFO     | exeerrordiag: 
[2025-07-23 18:50:40] 2025-07-23 16:50:08,300 | INFO     | exitcode: 0
[2025-07-23 18:50:40] 2025-07-23 16:50:08,300 | INFO     | exitmsg: OK
[2025-07-23 18:50:40] 2025-07-23 16:50:08,301 | INFO     | cpuconsumptiontime: 58387 s
[2025-07-23 18:50:40] 2025-07-23 16:50:08,301 | INFO     | nevents: 400
[2025-07-23 18:50:40] 2025-07-23 16:50:08,301 | INFO     | neventsw: 0
[2025-07-23 18:50:40] 2025-07-23 16:50:08,301 | INFO     | pid: 3937741
[2025-07-23 18:50:40] 2025-07-23 16:50:08,301 | INFO     | pgrp: 3937741
[2025-07-23 18:50:40] 2025-07-23 16:50:08,301 | INFO     | corecount: 12
[2025-07-23 18:50:40] 2025-07-23 16:50:08,301 | INFO     | event service: False
[2025-07-23 18:50:40] 2025-07-23 16:50:08,301 | INFO     | sizes: {0: 2397505, 1: 2397533, 6: 2397795, 11: 2397823, 5415: 2424290, 5417: 2433290, 5419: 2433474, 5426: 2433668}
[2025-07-23 18:50:40] 2025-07-23 16:50:08,301 | INFO     | --------------------------------------------------
[2025-07-23 18:50:40] 2025-07-23 16:50:08,301 | INFO     | 
[2025-07-23 18:50:40] 2025-07-23 16:50:08,301 | INFO     | executing command: ls -lF /scratch/.boinc/slots/8
[2025-07-23 18:50:40] 2025-07-23 16:50:08,326 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-23 18:50:40] 2025-07-23 16:50:08,326 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-23 18:50:40] 2025-07-23 16:50:08,326 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-23 18:50:40] 2025-07-23 16:50:08,326 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-23 18:50:40] 2025-07-23 16:50:08,327 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-23 18:50:40] 2025-07-23 16:50:08,327 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-23 18:50:40] 2025-07-23 16:50:08,327 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-23 18:50:40] 2025-07-23 16:50:08,327 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-23 18:50:40] 2025-07-23 16:50:08,327 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-23 18:50:40] 2025-07-23 16:50:08,327 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-23 18:50:40] 2025-07-23 16:50:08,327 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-23 18:50:40] 2025-07-23 16:50:08,327 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-23 18:50:40] 2025-07-23 16:50:08,327 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-23 18:50:40] 2025-07-23 16:50:08,327 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-23 18:50:40] 2025-07-23 16:50:08,327 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-23 18:50:40] 2025-07-23 16:50:08,328 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-23 18:50:40] 2025-07-23 16:50:08,328 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-23 18:50:40] 2025-07-23 16:50:08,328 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-23 18:50:40] 2025-07-23 16:50:08,328 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-23 18:50:40] 2025-07-23 16:50:08,328 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-23 18:50:40] 2025-07-23 16:50:08,328 | INFO     | job 6741871390 has completed (purged errors)
[2025-07-23 18:50:40] 2025-07-23 16:50:08,328 | INFO     | overall cleanup function is called
[2025-07-23 18:50:40] 2025-07-23 16:50:09,338 | INFO     | --- collectZombieJob: --- 10, [3937741]
[2025-07-23 18:50:40] 2025-07-23 16:50:09,338 | INFO     | zombie collector waiting for pid 3937741
[2025-07-23 18:50:40] 2025-07-23 16:50:09,338 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-23 18:50:40] 2025-07-23 16:50:09,338 | INFO     | collected zombie processes
[2025-07-23 18:50:40] 2025-07-23 16:50:09,338 | INFO     | will attempt to kill all subprocesses of pid=3937741
[2025-07-23 18:50:40] 2025-07-23 16:50:09,690 | INFO     | process IDs to be killed: [3937741] (in reverse order)
[2025-07-23 18:50:40] 2025-07-23 16:50:09,806 | WARNING  | found no corresponding commands to process id(s)
[2025-07-23 18:50:40] 2025-07-23 16:50:09,806 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-23 18:50:40] 2025-07-23 16:50:09,819 | INFO     | did not find any defunct processes belonging to 3937741
[2025-07-23 18:50:40] 2025-07-23 16:50:09,830 | INFO     | did not find any defunct processes belonging to 3937741
[2025-07-23 18:50:40] 2025-07-23 16:50:09,831 | INFO     | ready for new job
[2025-07-23 18:50:40] 2025-07-23 16:50:09,831 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-23 18:50:40] 2025-07-23 16:50:09,832 | INFO     | ***************************************
[2025-07-23 18:50:40] 2025-07-23 16:50:09,833 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-23 18:50:40] 2025-07-23 16:50:09,833 | INFO     | ***************************************
[2025-07-23 18:50:40] 2025-07-23 16:50:09,833 | INFO     | 
[2025-07-23 18:50:40] 2025-07-23 16:50:09,839 | INFO     | architecture information:
[2025-07-23 18:50:40] 2025-07-23 16:50:09,839 | INFO     | executing command: cat /etc/os-release
[2025-07-23 18:50:40] 2025-07-23 16:50:09,862 | INFO     | cat /etc/os-release:
[2025-07-23 18:50:40] NAME="CentOS Linux"
[2025-07-23 18:50:40] VERSION="7 (Core)"
[2025-07-23 18:50:40] ID="centos"
[2025-07-23 18:50:40] ID_LIKE="rhel fedora"
[2025-07-23 18:50:40] VERSION_ID="7"
[2025-07-23 18:50:40] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-23 18:50:40] ANSI_COLOR="0;31"
[2025-07-23 18:50:40] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-23 18:50:40] HOME_URL="https://www.centos.org/"
[2025-07-23 18:50:40] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-23 18:50:40] 
[2025-07-23 18:50:40] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-23 18:50:40] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-23 18:50:40] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-23 18:50:40] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-23 18:50:40] 
[2025-07-23 18:50:40] 2025-07-23 16:50:09,862 | INFO     | ***************************************
[2025-07-23 18:50:40] 2025-07-23 16:50:10,365 | INFO     | executing command: df -mP /scratch/.boinc/slots/8
[2025-07-23 18:50:40] 2025-07-23 16:50:10,387 | INFO     | sufficient remaining disk space (1675114840064 B)
[2025-07-23 18:50:40] 2025-07-23 16:50:10,388 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-23 18:50:40] 2025-07-23 16:50:10,388 | INFO     | current server update state: UPDATING_FINAL
[2025-07-23 18:50:40] 2025-07-23 16:50:10,388 | INFO     | update_server=False
[2025-07-23 18:50:40] 2025-07-23 16:50:10,388 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-23 18:50:40] 2025-07-23 16:50:10,388 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-23 18:50:40] 2025-07-23 16:50:10,519 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-23 18:50:40] 2025-07-23 16:50:10,519 | INFO     | aborting loop
[2025-07-23 18:50:40] 2025-07-23 16:50:10,800 | INFO     | all data control threads have been joined
[2025-07-23 18:50:40] 2025-07-23 16:50:10,884 | INFO     | all job control threads have been joined
[2025-07-23 18:50:40] 2025-07-23 16:50:11,159 | INFO     | all payload control threads have been joined
[2025-07-23 18:50:40] 2025-07-23 16:50:11,395 | INFO     | [job] retrieve thread has finished
[2025-07-23 18:50:40] 2025-07-23 16:50:11,524 | INFO     | [job] job monitor thread has finished
[2025-07-23 18:50:40] 2025-07-23 16:50:11,543 | INFO     | [payload] failed_post thread has finished
[2025-07-23 18:50:40] 2025-07-23 16:50:11,805 | INFO     | [data] control thread has finished
[2025-07-23 18:50:40] 2025-07-23 16:50:11,831 | INFO     | [payload] execute_payloads thread has finished
[2025-07-23 18:50:40] 2025-07-23 16:50:11,854 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-23 18:50:40] 2025-07-23 16:50:11,890 | INFO     | [job] control thread has finished
[2025-07-23 18:50:40] 2025-07-23 16:50:12,165 | INFO     | [payload] control thread has finished
[2025-07-23 18:50:40] 2025-07-23 16:50:12,396 | INFO     | [data] copytool_out thread has finished
[2025-07-23 18:50:40] 2025-07-23 16:50:12,498 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-23 18:50:40] 2025-07-23 16:50:12,606 | INFO     | [job] validate thread has finished
[2025-07-23 18:50:40] 2025-07-23 16:50:12,788 | INFO     | [job] create_data_payload thread has finished
[2025-07-23 18:50:40] 2025-07-23 16:50:12,821 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-23 18:50:40] 2025-07-23 16:50:12,829 | INFO     | [payload] validate_post thread has finished
[2025-07-23 18:50:40] 2025-07-23 16:50:12,851 | INFO     | [data] copytool_in thread has finished
[2025-07-23 18:50:40] 2025-07-23 16:50:12,871 | INFO     | [payload] validate_pre thread has finished
[2025-07-23 18:50:40] 2025-07-23 16:50:13,823 | INFO     | [job] queue monitor thread has finished
[2025-07-23 18:50:40] 2025-07-23 16:50:15,860 | INFO     | [data] queue_monitor thread has finished
[2025-07-23 18:50:40] 2025-07-23 16:50:17,910 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139733097527104)>', '<ExcThread(monitor, started 139732331788032)>']
[2025-07-23 18:50:40] 2025-07-23 16:50:22,933 | INFO     | all workflow threads have been joined
[2025-07-23 18:50:40] 2025-07-23 16:50:22,933 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-23 18:50:40] 2025-07-23 16:50:22,934 | INFO     | traces error code: 0
[2025-07-23 18:50:40] 2025-07-23 16:50:22,934 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-23 18:50:40] 2025-07-23 16:50:40,472 | INFO     | PID=3930195 has CPU usage=2.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-07-23 18:50:40] 2025-07-23 16:50:40,473 | INFO     | .. there are 8 such processes running
[2025-07-23 18:50:40] 2025-07-23 16:50:40,474 | INFO     | found 0 job(s) in 20 queues
[2025-07-23 18:50:40] 2025-07-23 16:50:40,474 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-23 18:50:40] 2025-07-23 16:50:40,474 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-23 18:50:40] 2025-07-23 16:50:40,474 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-23 18:50:40] 2025-07-23 16:50:40,475 | INFO     | [monitor] control thread has ended
[2025-07-23 18:50:40] 2025-07-23 16:50:40,610 [wrapper] ==== pilot stdout END ====
[2025-07-23 18:50:40] 2025-07-23 16:50:40,614 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-23 18:50:40] 2025-07-23 16:50:40,618 [wrapper] pilotpid: 3930195
[2025-07-23 18:50:40] 2025-07-23 16:50:40,621 [wrapper] Pilot exit status: 0
[2025-07-23 18:50:40] 2025-07-23 16:50:40,636 [wrapper] pandaids: 6741871390
[2025-07-23 18:50:40] 2025-07-23 16:50:40,715 [wrapper] cleanup supervisor_pilot 4163289 3930196
[2025-07-23 18:50:40] 2025-07-23 16:50:40,719 [wrapper] Test setup, not cleaning
[2025-07-23 18:50:40] 2025-07-23 16:50:40,723 [wrapper] apfmon messages muted
[2025-07-23 18:50:40] 2025-07-23 16:50:40,727 [wrapper] ==== wrapper stdout END ====
[2025-07-23 18:50:40] 2025-07-23 16:50:40,730 [wrapper] ==== wrapper stderr END ====
[2025-07-23 18:50:40]  *** Error codes and diagnostics ***
[2025-07-23 18:50:40]     "exeErrorCode": 0,
[2025-07-23 18:50:40]     "exeErrorDiag": "",
[2025-07-23 18:50:40]     "pilotErrorCode": 0,
[2025-07-23 18:50:40]     "pilotErrorDiag": "",
[2025-07-23 18:50:40]  *** Listing of results directory ***
[2025-07-23 18:50:40] total 638752
[2025-07-23 18:50:40] -rw-r--r-- 1 boinc boinc    530466 Jul 23 02:24 pilot3.tar.gz
[2025-07-23 18:50:40] -rw-r--r-- 1 boinc boinc      5112 Jul 23 03:20 queuedata.json
[2025-07-23 18:50:40] -rwx------ 1 boinc boinc     36292 Jul 23 03:22 runpilot2-wrapper.sh
[2025-07-23 18:50:40] -rw-r--r-- 1 boinc boinc       100 Jul 23 17:19 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-23 18:50:40] -rwxr-xr-x 1 boinc boinc      7986 Jul 23 17:19 run_atlas
[2025-07-23 18:50:40] -rw-r--r-- 1 boinc boinc       105 Jul 23 17:19 job.xml
[2025-07-23 18:50:40] -rw-r--r-- 2 boinc boinc 344333880 Jul 23 17:19 EVNT.45697488._000171.pool.root.1
[2025-07-23 18:50:40] -rw-r--r-- 1 boinc boinc      6664 Jul 23 17:19 init_data.xml
[2025-07-23 18:50:40] -rw-r--r-- 2 boinc boinc     15095 Jul 23 17:19 start_atlas.sh
[2025-07-23 18:50:40] drwxrwx--x 2 boinc boinc      4096 Jul 23 17:19 shared
[2025-07-23 18:50:40] -rw-r--r-- 2 boinc boinc    542905 Jul 23 17:19 input.tar.gz
[2025-07-23 18:50:40] -rw-r--r-- 1 boinc boinc         0 Jul 23 17:19 boinc_lockfile
[2025-07-23 18:50:40] -rw-r--r-- 1 boinc boinc      2590 Jul 23 17:19 pandaJob.out
[2025-07-23 18:50:40] -rw------- 1 boinc boinc    978487 Jul 23 17:19 agis_schedconf.cvmfs.json
[2025-07-23 18:50:40] -rw------- 1 boinc boinc   1593041 Jul 23 17:19 agis_ddmendpoints.agis.ALL.json
[2025-07-23 18:50:40] drwx------ 4 boinc boinc      4096 Jul 23 17:19 pilot3
[2025-07-23 18:50:40] -rw------- 1 boinc boinc 304071601 Jul 23 18:49 HITS.45697490._003795.pool.root.1
[2025-07-23 18:50:40] -rw-r--r-- 1 boinc boinc       531 Jul 23 18:49 boinc_task_state.xml
[2025-07-23 18:50:40] -rw------- 1 boinc boinc      1023 Jul 23 18:49 memory_monitor_summary.json
[2025-07-23 18:50:40] -rw------- 1 boinc boinc    381397 Jul 23 18:49 log.45697490._003795.job.log.tgz.1
[2025-07-23 18:50:40] -rw------- 1 boinc boinc      7776 Jul 23 18:50 heartbeat.json
[2025-07-23 18:50:40] -rw-r--r-- 1 boinc boinc        27 Jul 23 18:50 wrapper_checkpoint.txt
[2025-07-23 18:50:40] -rw------- 1 boinc boinc       822 Jul 23 18:50 pilotlog.txt
[2025-07-23 18:50:40] -rw------- 1 boinc boinc        95 Jul 23 18:50 pilot_heartbeat.json
[2025-07-23 18:50:40] -rw-r--r-- 1 boinc boinc      8192 Jul 23 18:50 boinc_mmap_file
[2025-07-23 18:50:40] -rw------- 1 boinc boinc    516732 Jul 23 18:50 log.45697490._003795.job.log.1
[2025-07-23 18:50:40] -rw------- 1 boinc boinc       357 Jul 23 18:50 output.list
[2025-07-23 18:50:40] -rw-r--r-- 1 boinc boinc       620 Jul 23 18:50 runtime_log
[2025-07-23 18:50:40] -rw------- 1 boinc boinc    921600 Jul 23 18:50 result.tar.gz
[2025-07-23 18:50:40] -rw-r--r-- 1 boinc boinc      8721 Jul 23 18:50 runtime_log.err
[2025-07-23 18:50:40] -rw------- 1 boinc boinc       663 Jul 23 18:50 ApFMDmNMdy7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmacKLDmAYWsgn.diag
[2025-07-23 18:50:40] -rw-r--r-- 1 boinc boinc     22212 Jul 23 18:50 stderr.txt
[2025-07-23 18:50:40] HITS file was successfully produced:
[2025-07-23 18:50:40] -rw------- 1 boinc boinc 304071601 Jul 23 18:49 shared/HITS.pool.root.1
[2025-07-23 18:50:40]  *** Contents of shared directory: ***
[2025-07-23 18:50:40] total 634668
[2025-07-23 18:50:40] -rw-r--r-- 2 boinc boinc 344333880 Jul 23 17:19 ATLAS.root_0
[2025-07-23 18:50:40] -rw-r--r-- 2 boinc boinc     15095 Jul 23 17:19 start_atlas.sh
[2025-07-23 18:50:40] -rw-r--r-- 2 boinc boinc    542905 Jul 23 17:19 input.tar.gz
[2025-07-23 18:50:40] -rw------- 1 boinc boinc 304071601 Jul 23 18:49 HITS.pool.root.1
[2025-07-23 18:50:40] -rw------- 1 boinc boinc    921600 Jul 23 18:50 result.tar.gz
18:50:42 (3926208): run_atlas exited; CPU time 58503.781128
18:50:42 (3926208): called boinc_finish(0)

</stderr_txt>
]]>

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