Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
09:04:23 (2955155): wrapper (7.7.26015): starting
09:04:23 (2955155): wrapper: running run_atlas (--nthreads 12)
[2025-07-23 09:04:23] Arguments: --nthreads 12
[2025-07-23 09:04:23] Threads: 12
[2025-07-23 09:04:23] Checking for CVMFS
[2025-07-23 09:04:23] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-23 09:04:23] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-23 09:04:23] Running cvmfs_config stat atlas.cern.ch
[2025-07-23 09:04:24] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-23 09:04:24] 2.12.6.0 1267368 12637 338712 148658 1 436 30830079 32935937 18870 16776704 0 23930554 99.695 53095896 30305 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-07-23 09:04:24] CVMFS is ok
[2025-07-23 09:04:24] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-07-23 09:04:24] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-07-23 09:04:24] Further information can be found at the LHC@home message board.
[2025-07-23 09:04:24] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-23 09:04:24] Checking for apptainer binary...
[2025-07-23 09:04:24] Using apptainer found in PATH at /usr/bin/apptainer
[2025-07-23 09:04:24] Running /usr/bin/apptainer --version
[2025-07-23 09:04:25] apptainer version 1.4.1-1.el9
[2025-07-23 09:04:25] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-23 09:04:25] c6-2-29-3.aglt2.org
[2025-07-23 09:04:25] apptainer works
[2025-07-23 09:04:25] Set ATHENA_PROC_NUMBER=12
[2025-07-23 09:04:25] Set ATHENA_CORE_NUMBER=12
[2025-07-23 09:04:25] Starting ATLAS job with PandaID=6741872977
[2025-07-23 09:04:25] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-23 13:10:22]  *** The last 200 lines of the pilot log: ***
[2025-07-23 13:10:22] 2025-07-23 17:09:47,773 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-23 13:10:22] 2025-07-23 17:09:47,773 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-23 13:10:22] 2025-07-23 17:09:47,784 | INFO     | fitting pss+swap vs Time
[2025-07-23 13:10:22] 2025-07-23 17:09:47,789 | INFO     | sum of square deviations: 4286689661.933354
[2025-07-23 13:10:22] 2025-07-23 17:09:47,791 | INFO     | sum of deviations: 38378503732.91665
[2025-07-23 13:10:22] 2025-07-23 17:09:47,792 | INFO     | mean x: 1753283275.0166667
[2025-07-23 13:10:22] 2025-07-23 17:09:47,792 | INFO     | mean y: 2412697.7708333335
[2025-07-23 13:10:22] 2025-07-23 17:09:47,796 | INFO     | -- intersect: -15694638878.558933
[2025-07-23 13:10:22] 2025-07-23 17:09:47,797 | INFO     | intersect: -15694638878.558933
[2025-07-23 13:10:22] 2025-07-23 17:09:47,797 | INFO     | chi2: 2.5520246037466325
[2025-07-23 13:10:22] 2025-07-23 17:09:47,798 | INFO     | sum of square deviations: 4024345374.6212525
[2025-07-23 13:10:22] 2025-07-23 17:09:47,812 | INFO     | sum of deviations: 52758779620.33195
[2025-07-23 13:10:22] 2025-07-23 17:09:47,813 | INFO     | mean x: 1753283122.5234044
[2025-07-23 13:10:22] 2025-07-23 17:09:47,813 | INFO     | mean y: 2420910.485106383
[2025-07-23 13:10:22] 2025-07-23 17:09:47,813 | INFO     | -- intersect: -22982951681.191467
[2025-07-23 13:10:22] 2025-07-23 17:09:47,813 | INFO     | intersect: -22982951681.191467
[2025-07-23 13:10:22] 2025-07-23 17:09:47,814 | INFO     | chi2: 1.8653965656644458
[2025-07-23 13:10:22] 2025-07-23 17:09:47,814 | INFO     | current chi2=1.8653965656644458 (change=26.905227993262553 %)
[2025-07-23 13:10:22] 2025-07-23 17:09:47,814 | INFO     | sum of square deviations: 3772902488.891294
[2025-07-23 13:10:22] 2025-07-23 17:09:47,816 | INFO     | sum of deviations: 51026392076.52176
[2025-07-23 13:10:22] 2025-07-23 17:09:47,816 | INFO     | mean x: 1753282970.0217392
[2025-07-23 13:10:22] 2025-07-23 17:09:47,816 | INFO     | mean y: 2419857.895652174
[2025-07-23 13:10:22] 2025-07-23 17:09:47,817 | INFO     | -- intersect: -23709749887.500454
[2025-07-23 13:10:22] 2025-07-23 17:09:47,817 | INFO     | intersect: -23709749887.500454
[2025-07-23 13:10:22] 2025-07-23 17:09:47,817 | INFO     | chi2: 1.8660033819290964
[2025-07-23 13:10:22] 2025-07-23 17:09:47,817 | INFO     | current chi2=1.8660033819290964 (change=-0.032530148056453594 %)
[2025-07-23 13:10:22] 2025-07-23 17:09:47,817 | INFO     | right removable region: 229
[2025-07-23 13:10:22] 2025-07-23 17:09:47,818 | INFO     | sum of square deviations: 4024284130.570219
[2025-07-23 13:10:22] 2025-07-23 17:09:47,820 | INFO     | sum of deviations: -4497647039.353193
[2025-07-23 13:10:22] 2025-07-23 17:09:47,820 | INFO     | mean x: 1753283427.5276597
[2025-07-23 13:10:22] 2025-07-23 17:09:47,820 | INFO     | mean y: 2437465.285106383
[2025-07-23 13:10:22] 2025-07-23 17:09:47,820 | INFO     | -- intersect: 1961953682.607824
[2025-07-23 13:10:22] 2025-07-23 17:09:47,820 | INFO     | intersect: 1961953682.607824
[2025-07-23 13:10:22] 2025-07-23 17:09:47,821 | INFO     | chi2: 0.9535953211779922
[2025-07-23 13:10:22] 2025-07-23 17:09:47,821 | INFO     | current chi2=0.9535953211779922 (change=62.63377242609586 %)
[2025-07-23 13:10:22] 2025-07-23 17:09:47,821 | INFO     | sum of square deviations: 3772823615.72172
[2025-07-23 13:10:22] 2025-07-23 17:09:47,823 | INFO     | sum of deviations: -18623161362.72174
[2025-07-23 13:10:22] 2025-07-23 17:09:47,824 | INFO     | mean x: 1753283580.0347826
[2025-07-23 13:10:22] 2025-07-23 17:09:47,824 | INFO     | mean y: 2446039.4652173915
[2025-07-23 13:10:22] 2025-07-23 17:09:47,824 | INFO     | -- intersect: 8656888004.24075
[2025-07-23 13:10:22] 2025-07-23 17:09:47,824 | INFO     | intersect: 8656888004.24075
[2025-07-23 13:10:22] 2025-07-23 17:09:47,824 | INFO     | chi2: 0.7864382931353706
[2025-07-23 13:10:22] 2025-07-23 17:09:47,825 | INFO     | current chi2=0.7864382931353706 (change=17.529136765911318 %)
[2025-07-23 13:10:22] 2025-07-23 17:09:47,825 | INFO     | left removable region: 20
[2025-07-23 13:10:22] 2025-07-23 17:09:47,825 | INFO     | sum of square deviations: 2830840473.377996
[2025-07-23 13:10:22] 2025-07-23 17:09:47,827 | INFO     | sum of deviations: -5913106901.660282
[2025-07-23 13:10:22] 2025-07-23 17:09:47,827 | INFO     | mean x: 1753283549.5645933
[2025-07-23 13:10:22] 2025-07-23 17:09:47,827 | INFO     | mean y: 2456711.937799043
[2025-07-23 13:10:22] 2025-07-23 17:09:47,827 | INFO     | -- intersect: 3664744698.4899487
[2025-07-23 13:10:22] 2025-07-23 17:09:47,827 | INFO     | intersect: 3664744698.4899487
[2025-07-23 13:10:22] 2025-07-23 17:09:47,828 | INFO     | chi2: 0.0772980489868379
[2025-07-23 13:10:22] 2025-07-23 17:09:47,828 | INFO     | -- intersect: 3664744698.4899487
[2025-07-23 13:10:22] 2025-07-23 17:09:47,831 | INFO     | current memory leak: -2.09 B/s (using 209 data points, chi2=0.08)
[2025-07-23 13:10:22] 2025-07-23 17:09:47,832 | INFO     | could have reported an average CPU frequency of 2690 MHz (11 samples)
[2025-07-23 13:10:22] 2025-07-23 17:09:47,833 | INFO     | ..............................
[2025-07-23 13:10:22] 2025-07-23 17:09:47,833 | INFO     | . Timing measurements:
[2025-07-23 13:10:22] 2025-07-23 17:09:47,833 | INFO     | . get job = 0 s
[2025-07-23 13:10:22] 2025-07-23 17:09:47,833 | INFO     | . initial setup = 3 s
[2025-07-23 13:10:22] 2025-07-23 17:09:47,833 | INFO     | . payload setup = 25 s
[2025-07-23 13:10:22] 2025-07-23 17:09:47,834 | INFO     | . stage-in = 0 s
[2025-07-23 13:10:22] 2025-07-23 17:09:47,834 | INFO     | . payload execution = 14601 s
[2025-07-23 13:10:22] 2025-07-23 17:09:47,834 | INFO     | . stage-out = 3 s
[2025-07-23 13:10:22] 2025-07-23 17:09:47,834 | INFO     | . log creation = 0 s
[2025-07-23 13:10:22] 2025-07-23 17:09:47,834 | INFO     | ..............................
[2025-07-23 13:10:22] 2025-07-23 17:09:48,063 | INFO     | 
[2025-07-23 13:10:22] 2025-07-23 17:09:48,063 | INFO     | job summary report
[2025-07-23 13:10:22] 2025-07-23 17:09:48,063 | INFO     | --------------------------------------------------
[2025-07-23 13:10:22] 2025-07-23 17:09:48,064 | INFO     | PanDA job id: 6741872977
[2025-07-23 13:10:22] 2025-07-23 17:09:48,064 | INFO     | task id: 45697490
[2025-07-23 13:10:22] 2025-07-23 17:09:48,064 | INFO     | errors: (none)
[2025-07-23 13:10:22] 2025-07-23 17:09:48,064 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-23 13:10:22] 2025-07-23 17:09:48,064 | INFO     | pilot state: finished 
[2025-07-23 13:10:22] 2025-07-23 17:09:48,064 | INFO     | transexitcode: 0
[2025-07-23 13:10:22] 2025-07-23 17:09:48,064 | INFO     | exeerrorcode: 0
[2025-07-23 13:10:22] 2025-07-23 17:09:48,064 | INFO     | exeerrordiag: 
[2025-07-23 13:10:22] 2025-07-23 17:09:48,064 | INFO     | exitcode: 0
[2025-07-23 13:10:22] 2025-07-23 17:09:48,064 | INFO     | exitmsg: OK
[2025-07-23 13:10:22] 2025-07-23 17:09:48,065 | INFO     | cpuconsumptiontime: 70337 s
[2025-07-23 13:10:22] 2025-07-23 17:09:48,065 | INFO     | nevents: 400
[2025-07-23 13:10:22] 2025-07-23 17:09:48,065 | INFO     | neventsw: 0
[2025-07-23 13:10:22] 2025-07-23 17:09:48,065 | INFO     | pid: 2965867
[2025-07-23 13:10:22] 2025-07-23 17:09:48,065 | INFO     | pgrp: 2965867
[2025-07-23 13:10:22] 2025-07-23 17:09:48,065 | INFO     | corecount: 12
[2025-07-23 13:10:22] 2025-07-23 17:09:48,065 | INFO     | event service: False
[2025-07-23 13:10:22] 2025-07-23 17:09:48,065 | INFO     | sizes: {0: 2397277, 1: 2397361, 2: 2397560, 13: 2397560, 18: 2397878, 24: 2397906, 14630: 2428666, 14631: 2428665, 14635: 2437775, 14647: 2437913}
[2025-07-23 13:10:22] 2025-07-23 17:09:48,065 | INFO     | --------------------------------------------------
[2025-07-23 13:10:22] 2025-07-23 17:09:48,065 | INFO     | 
[2025-07-23 13:10:22] 2025-07-23 17:09:48,065 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-07-23 13:10:22] 2025-07-23 17:09:48,100 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-23 13:10:22] 2025-07-23 17:09:48,100 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-23 13:10:22] 2025-07-23 17:09:48,101 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-23 13:10:22] 2025-07-23 17:09:48,101 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-23 13:10:22] 2025-07-23 17:09:48,101 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-23 13:10:22] 2025-07-23 17:09:48,101 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-23 13:10:22] 2025-07-23 17:09:48,101 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-23 13:10:22] 2025-07-23 17:09:48,101 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-23 13:10:22] 2025-07-23 17:09:48,101 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-23 13:10:22] 2025-07-23 17:09:48,101 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-23 13:10:22] 2025-07-23 17:09:48,101 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-23 13:10:22] 2025-07-23 17:09:48,102 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-23 13:10:22] 2025-07-23 17:09:48,102 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-23 13:10:22] 2025-07-23 17:09:48,102 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-23 13:10:22] 2025-07-23 17:09:48,102 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-23 13:10:22] 2025-07-23 17:09:48,102 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-23 13:10:22] 2025-07-23 17:09:48,102 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-23 13:10:22] 2025-07-23 17:09:48,102 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-23 13:10:22] 2025-07-23 17:09:48,102 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-23 13:10:22] 2025-07-23 17:09:48,102 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-23 13:10:22] 2025-07-23 17:09:48,103 | INFO     | job 6741872977 has completed (purged errors)
[2025-07-23 13:10:22] 2025-07-23 17:09:48,103 | INFO     | overall cleanup function is called
[2025-07-23 13:10:22] 2025-07-23 17:09:48,958 | INFO     | PID=2958739 has CPU usage=12.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2025-07-23 13:10:22] 2025-07-23 17:09:48,958 | INFO     | .. there are 22 such processes running
[2025-07-23 13:10:22] 2025-07-23 17:09:49,115 | INFO     | --- collectZombieJob: --- 10, [2965867]
[2025-07-23 13:10:22] 2025-07-23 17:09:49,115 | INFO     | zombie collector waiting for pid 2965867
[2025-07-23 13:10:22] 2025-07-23 17:09:49,116 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-23 13:10:22] 2025-07-23 17:09:49,116 | INFO     | collected zombie processes
[2025-07-23 13:10:22] 2025-07-23 17:09:49,116 | INFO     | will attempt to kill all subprocesses of pid=2965867
[2025-07-23 13:10:22] 2025-07-23 17:09:49,676 | INFO     | process IDs to be killed: [2965867] (in reverse order)
[2025-07-23 13:10:22] 2025-07-23 17:09:49,823 | WARNING  | found no corresponding commands to process id(s)
[2025-07-23 13:10:22] 2025-07-23 17:09:49,824 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-23 13:10:22] 2025-07-23 17:09:49,891 | INFO     | did not find any defunct processes belonging to 2965867
[2025-07-23 13:10:22] 2025-07-23 17:09:49,935 | INFO     | did not find any defunct processes belonging to 2965867
[2025-07-23 13:10:22] 2025-07-23 17:09:49,943 | INFO     | ready for new job
[2025-07-23 13:10:22] 2025-07-23 17:09:49,943 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-23 13:10:22] 2025-07-23 17:09:49,947 | INFO     | ***************************************
[2025-07-23 13:10:22] 2025-07-23 17:09:49,947 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-23 13:10:22] 2025-07-23 17:09:49,947 | INFO     | ***************************************
[2025-07-23 13:10:22] 2025-07-23 17:09:49,947 | INFO     | 
[2025-07-23 13:10:22] 2025-07-23 17:09:49,956 | INFO     | architecture information:
[2025-07-23 13:10:22] 2025-07-23 17:09:49,960 | INFO     | executing command: cat /etc/os-release
[2025-07-23 13:10:22] 2025-07-23 17:09:50,028 | INFO     | cat /etc/os-release:
[2025-07-23 13:10:22] NAME="CentOS Linux"
[2025-07-23 13:10:22] VERSION="7 (Core)"
[2025-07-23 13:10:22] ID="centos"
[2025-07-23 13:10:22] ID_LIKE="rhel fedora"
[2025-07-23 13:10:22] VERSION_ID="7"
[2025-07-23 13:10:22] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-23 13:10:22] ANSI_COLOR="0;31"
[2025-07-23 13:10:22] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-23 13:10:22] HOME_URL="https://www.centos.org/"
[2025-07-23 13:10:22] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-23 13:10:22] 
[2025-07-23 13:10:22] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-23 13:10:22] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-23 13:10:22] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-23 13:10:22] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-23 13:10:22] 
[2025-07-23 13:10:22] 2025-07-23 17:09:50,028 | INFO     | ***************************************
[2025-07-23 13:10:22] 2025-07-23 17:09:50,533 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-07-23 13:10:22] 2025-07-23 17:09:50,590 | INFO     | sufficient remaining disk space (75856084992 B)
[2025-07-23 13:10:22] 2025-07-23 17:09:50,594 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-23 13:10:22] 2025-07-23 17:09:50,595 | INFO     | current server update state: UPDATING_FINAL
[2025-07-23 13:10:22] 2025-07-23 17:09:50,595 | INFO     | update_server=False
[2025-07-23 13:10:22] 2025-07-23 17:09:50,595 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-23 13:10:22] 2025-07-23 17:09:50,602 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-23 13:10:22] 2025-07-23 17:09:50,606 | INFO     | aborting loop
[2025-07-23 13:10:22] 2025-07-23 17:09:50,735 | INFO     | all job control threads have been joined
[2025-07-23 13:10:22] 2025-07-23 17:09:50,779 | INFO     | all payload control threads have been joined
[2025-07-23 13:10:22] 2025-07-23 17:09:50,993 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-23 13:10:22] 2025-07-23 17:09:51,310 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-23 13:10:22] 2025-07-23 17:09:51,601 | INFO     | [job] retrieve thread has finished
[2025-07-23 13:10:22] 2025-07-23 17:09:51,604 | INFO     | [payload] validate_pre thread has finished
[2025-07-23 13:10:22] 2025-07-23 17:09:51,615 | INFO     | all data control threads have been joined
[2025-07-23 13:10:22] 2025-07-23 17:09:51,616 | INFO     | [job] job monitor thread has finished
[2025-07-23 13:10:22] 2025-07-23 17:09:51,696 | INFO     | [payload] execute_payloads thread has finished
[2025-07-23 13:10:22] 2025-07-23 17:09:51,741 | INFO     | [job] control thread has finished
[2025-07-23 13:10:22] 2025-07-23 17:09:51,785 | INFO     | [payload] control thread has finished
[2025-07-23 13:10:22] 2025-07-23 17:09:52,265 | INFO     | [payload] failed_post thread has finished
[2025-07-23 13:10:22] 2025-07-23 17:09:52,280 | INFO     | [job] create_data_payload thread has finished
[2025-07-23 13:10:22] 2025-07-23 17:09:52,332 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-23 13:10:22] 2025-07-23 17:09:52,350 | INFO     | [payload] validate_post thread has finished
[2025-07-23 13:10:22] 2025-07-23 17:09:52,621 | INFO     | [data] control thread has finished
[2025-07-23 13:10:22] 2025-07-23 17:09:52,989 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-23 13:10:22] 2025-07-23 17:09:53,042 | INFO     | [job] validate thread has finished
[2025-07-23 13:10:22] 2025-07-23 17:09:53,074 | INFO     | [data] copytool_in thread has finished
[2025-07-23 13:10:22] 2025-07-23 17:09:53,317 | INFO     | [data] copytool_out thread has finished
[2025-07-23 13:10:22] 2025-07-23 17:09:53,995 | INFO     | [job] queue monitor thread has finished
[2025-07-23 13:10:22] 2025-07-23 17:09:55,002 | INFO     | [data] queue_monitor thread has finished
[2025-07-23 13:10:22] 2025-07-23 17:09:56,186 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139998107219776)>', '<ExcThread(monitor, started 139997462124288)>']
[2025-07-23 13:10:22] 2025-07-23 17:10:01,212 | INFO     | all workflow threads have been joined
[2025-07-23 13:10:22] 2025-07-23 17:10:01,212 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-23 13:10:22] 2025-07-23 17:10:01,213 | INFO     | traces error code: 0
[2025-07-23 13:10:22] 2025-07-23 17:10:01,213 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-23 13:10:22] 2025-07-23 17:10:21,578 | INFO     | PID=2958739 has CPU usage=2.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-07-23 13:10:22] 2025-07-23 17:10:21,579 | INFO     | .. there are 22 such processes running
[2025-07-23 13:10:22] 2025-07-23 17:10:21,580 | INFO     | found 0 job(s) in 20 queues
[2025-07-23 13:10:22] 2025-07-23 17:10:21,580 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-23 13:10:22] 2025-07-23 17:10:21,580 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-23 13:10:22] 2025-07-23 17:10:21,580 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-23 13:10:22] 2025-07-23 17:10:21,580 | INFO     | [monitor] control thread has ended
[2025-07-23 13:10:22] 2025-07-23 17:10:22,009 [wrapper] ==== pilot stdout END ====
[2025-07-23 13:10:22] 2025-07-23 17:10:22,013 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-23 13:10:22] 2025-07-23 17:10:22,017 [wrapper] pilotpid: 2958739
[2025-07-23 13:10:22] 2025-07-23 17:10:22,022 [wrapper] Pilot exit status: 0
[2025-07-23 13:10:22] 2025-07-23 17:10:22,040 [wrapper] pandaids: 6741872977
[2025-07-23 13:10:22] 2025-07-23 17:10:22,137 [wrapper] cleanup supervisor_pilot 3658475 2958740
[2025-07-23 13:10:22] 2025-07-23 17:10:22,146 [wrapper] Test setup, not cleaning
[2025-07-23 13:10:22] 2025-07-23 17:10:22,157 [wrapper] apfmon messages muted
[2025-07-23 13:10:22] 2025-07-23 17:10:22,164 [wrapper] ==== wrapper stdout END ====
[2025-07-23 13:10:22] 2025-07-23 17:10:22,169 [wrapper] ==== wrapper stderr END ====
[2025-07-23 13:10:22]  *** Error codes and diagnostics ***
[2025-07-23 13:10:22]     "exeErrorCode": 0,
[2025-07-23 13:10:22]     "exeErrorDiag": "",
[2025-07-23 13:10:22]     "pilotErrorCode": 0,
[2025-07-23 13:10:22]     "pilotErrorDiag": "",
[2025-07-23 13:10:22]  *** Listing of results directory ***
[2025-07-23 13:10:22] total 643924
[2025-07-23 13:10:22] -rw-r--r--. 1 boincer umatlas    530466 Jul 23 00:19 pilot3.tar.gz
[2025-07-23 13:10:22] -rw-r--r--. 1 boincer umatlas      5112 Jul 23 00:55 queuedata.json
[2025-07-23 13:10:22] -rwx------. 1 boincer umatlas     36292 Jul 23 01:01 runpilot2-wrapper.sh
[2025-07-23 13:10:22] -rw-r--r--. 1 boincer umatlas       100 Jul 23 09:04 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-23 13:10:22] -rwxr-xr-x. 1 boincer umatlas      7986 Jul 23 09:04 run_atlas
[2025-07-23 13:10:22] -rw-r--r--. 1 boincer umatlas       105 Jul 23 09:04 job.xml
[2025-07-23 13:10:22] -rw-r--r--. 2 boincer umatlas 345057482 Jul 23 09:04 EVNT.45697488._000210.pool.root.1
[2025-07-23 13:10:22] -rw-r--r--. 2 boincer umatlas     15095 Jul 23 09:04 start_atlas.sh
[2025-07-23 13:10:22] drwxrwx--x. 2 boincer umatlas      4096 Jul 23 09:04 shared
[2025-07-23 13:10:22] -rw-r--r--. 2 boincer umatlas    542907 Jul 23 09:04 input.tar.gz
[2025-07-23 13:10:22] -rw-r--r--. 1 boincer umatlas         0 Jul 23 09:04 boinc_lockfile
[2025-07-23 13:10:22] -rw-r--r--. 1 boincer umatlas      2590 Jul 23 09:04 pandaJob.out
[2025-07-23 13:10:22] -rw-------. 1 boincer umatlas    978437 Jul 23 09:04 agis_schedconf.cvmfs.json
[2025-07-23 13:10:22] drwx------. 4 boincer umatlas      4096 Jul 23 09:05 pilot3
[2025-07-23 13:10:22] -rw-------. 1 boincer umatlas 307194175 Jul 23 13:08 HITS.45697490._004720.pool.root.1
[2025-07-23 13:10:22] -rw-r--r--. 1 boincer umatlas       532 Jul 23 13:08 boinc_task_state.xml
[2025-07-23 13:10:22] -rw-r--r--. 1 boincer umatlas      6843 Jul 23 13:09 init_data.xml
[2025-07-23 13:10:22] -rw-------. 1 boincer umatlas      1042 Jul 23 13:09 memory_monitor_summary.json
[2025-07-23 13:10:22] -rw-------. 1 boincer umatlas   1593041 Jul 23 13:09 agis_ddmendpoints.agis.ALL.json
[2025-07-23 13:10:22] -rw-------. 1 boincer umatlas    463298 Jul 23 13:09 log.45697490._004720.job.log.tgz.1
[2025-07-23 13:10:22] -rw-------. 1 boincer umatlas        95 Jul 23 13:09 pilot_heartbeat.json
[2025-07-23 13:10:22] -rw-------. 1 boincer umatlas      7826 Jul 23 13:09 heartbeat.json
[2025-07-23 13:10:22] -rw-r--r--. 1 boincer umatlas        28 Jul 23 13:10 wrapper_checkpoint.txt
[2025-07-23 13:10:22] -rw-r--r--. 1 boincer umatlas      8192 Jul 23 13:10 boinc_mmap_file
[2025-07-23 13:10:22] -rw-------. 1 boincer umatlas       823 Jul 23 13:10 pilotlog.txt
[2025-07-23 13:10:22] -rw-------. 1 boincer umatlas   1161987 Jul 23 13:10 log.45697490._004720.job.log.1
[2025-07-23 13:10:22] -rw-------. 1 boincer umatlas       357 Jul 23 13:10 output.list
[2025-07-23 13:10:22] -rw-r--r--. 1 boincer umatlas       620 Jul 23 13:10 runtime_log
[2025-07-23 13:10:22] -rw-------. 1 boincer umatlas   1648640 Jul 23 13:10 result.tar.gz
[2025-07-23 13:10:22] -rw-r--r--. 1 boincer umatlas      8668 Jul 23 13:10 runtime_log.err
[2025-07-23 13:10:22] -rw-------. 1 boincer umatlas       659 Jul 23 13:10 LvpMDm2mgy7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmGwKLDmgKIFPn.diag
[2025-07-23 13:10:22] -rw-r--r--. 1 boincer umatlas     21150 Jul 23 13:10 stderr.txt
[2025-07-23 13:10:22] HITS file was successfully produced:
[2025-07-23 13:10:22] -rw-------. 1 boincer umatlas 307194175 Jul 23 13:08 shared/HITS.pool.root.1
[2025-07-23 13:10:22]  *** Contents of shared directory: ***
[2025-07-23 13:10:22] total 639132
[2025-07-23 13:10:22] -rw-r--r--. 2 boincer umatlas 345057482 Jul 23 09:04 ATLAS.root_0
[2025-07-23 13:10:22] -rw-r--r--. 2 boincer umatlas     15095 Jul 23 09:04 start_atlas.sh
[2025-07-23 13:10:22] -rw-r--r--. 2 boincer umatlas    542907 Jul 23 09:04 input.tar.gz
[2025-07-23 13:10:22] -rw-------. 1 boincer umatlas 307194175 Jul 23 13:08 HITS.pool.root.1
[2025-07-23 13:10:22] -rw-------. 1 boincer umatlas   1648640 Jul 23 13:10 result.tar.gz
13:10:24 (2955155): run_atlas exited; CPU time 70671.880814
13:10:24 (2955155): called boinc_finish(0)

</stderr_txt>
]]>

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