Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
00:16:37 (1022129): wrapper (7.7.26015): starting
00:16:37 (1022129): wrapper: running run_atlas (--nthreads 8)
[2025-07-23 00:16:37] Arguments: --nthreads 8
[2025-07-23 00:16:37] Threads: 8
[2025-07-23 00:16:37] Checking for CVMFS
[2025-07-23 00:16:38] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-23 00:16:38] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-23 00:16:38] Running cvmfs_config stat atlas.cern.ch
[2025-07-23 00:16:38] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-23 00:16:38] 2.11.3.0 21122 472836 207172 148650 0 77 35470015 45568000 10778 130560 0 2507488336 99.768 1925037081 19139 http://cvmfs-s1bnl.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://206.12.9.164:3129 1
[2025-07-23 00:16:38] CVMFS is ok
[2025-07-23 00:16:38] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-07-23 00:16:38] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-07-23 00:16:38] Further information can be found at the LHC@home message board.
[2025-07-23 00:16:38] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-23 00:16:38] Checking for apptainer binary...
[2025-07-23 00:16:38] Using apptainer found in PATH at /usr/bin/apptainer
[2025-07-23 00:16:38] Running /usr/bin/apptainer --version
[2025-07-23 00:16:38] apptainer version 1.3.3-1.el9
[2025-07-23 00:16:38] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-23 00:16:39] WARNING: Environment variable TMPDIR already has value [/home/boinc/slots/0/.apptainertmp], will not forward new value [/home/boinc] from parent process environment wns0016.triumf.lcg
[2025-07-23 00:16:39] apptainer works
[2025-07-23 00:16:39] Set ATHENA_PROC_NUMBER=8
[2025-07-23 00:16:39] Set ATHENA_CORE_NUMBER=8
[2025-07-23 00:16:39] Starting ATLAS job with PandaID=6741687912
[2025-07-23 00:16:39] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-23 00:20:52]  *** The last 200 lines of the pilot log: ***
[2025-07-23 00:20:52] 2025-07-23 07:20:18,403 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-23 00:20:52] 2025-07-23 07:20:18,403 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-23 00:20:52] 2025-07-23 07:20:18,404 | WARNING  | wrong length of table data, x=[1753255056.0], y=[1861.0] (must be same and length>=4)
[2025-07-23 00:20:52] 2025-07-23 07:20:18,404 | INFO     | could have reported an average CPU frequency of 2095 MHz (4 samples)
[2025-07-23 00:20:52] 2025-07-23 07:20:18,404 | INFO     | ..............................
[2025-07-23 00:20:52] 2025-07-23 07:20:18,404 | INFO     | . Timing measurements:
[2025-07-23 00:20:52] 2025-07-23 07:20:18,404 | INFO     | . get job = 0 s
[2025-07-23 00:20:52] 2025-07-23 07:20:18,404 | INFO     | . initial setup = 3 s
[2025-07-23 00:20:52] 2025-07-23 07:20:18,404 | INFO     | . payload setup = 10 s
[2025-07-23 00:20:52] 2025-07-23 07:20:18,404 | INFO     | . stage-in = 0 s
[2025-07-23 00:20:52] 2025-07-23 07:20:18,404 | INFO     | . payload execution = 46 s
[2025-07-23 00:20:52] 2025-07-23 07:20:18,404 | INFO     | . stage-out = 0 s
[2025-07-23 00:20:52] 2025-07-23 07:20:18,405 | INFO     | . log creation = 0 s
[2025-07-23 00:20:52] 2025-07-23 07:20:18,405 | INFO     | ..............................
[2025-07-23 00:20:52] 2025-07-23 07:20:18,405 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-07-23 00:20:52] 2025-07-23 07:20:18,405 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6741687912/pilotlog.txt
[2025-07-23 00:20:52] 2025-07-23 07:20:18,554 | WARNING  | detected the following tail of warning/fatal messages in the pilot log:
[2025-07-23 00:20:52] - Log from pilotlog.txt -
[2025-07-23 00:20:52] 2025-07-23 07:20:18,401 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6741687912/memory_monitor_summary.json (trf name=prmon)
[2025-07-23 00:20:52] 2025-07-23 07:20:18,402 | INFO     | extracted standard info from prmon json
[2025-07-23 00:20:52] 2025-07-23 07:20:18,402 | INFO     | extracted standard memory fields from prmon json
[2025-07-23 00:20:52] 2025-07-23 07:20:18,402 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-23 00:20:52] 2025-07-23 07:20:18,403 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-23 00:20:52] 2025-07-23 07:20:18,403 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-23 00:20:52] 2025-07-23 07:20:18,404 | WARNING  | wrong length of table data, x=[1753255056.0], y=[1861.0] (must be same and length>=4)
[2025-07-23 00:20:52] 2025-07-23 07:20:18,404 | INFO     | could have reported an average CPU frequency of 2095 MHz (4 samples)
[2025-07-23 00:20:52] 2025-07-23 07:20:18,404 | INFO     | ..............................
[2025-07-23 00:20:52] 2025-07-23 07:20:18,404 | INFO     | . Timing measurements:
[2025-07-23 00:20:52] 2025-07-23 07:20:18,404 | INFO     | . get job = 0 s
[2025-07-23 00:20:52] 2025-07-23 07:20:18,404 | INFO     | . initial setup = 3 s
[2025-07-23 00:20:52] 2025-07-23 07:20:18,404 | INFO     | . payload setup = 10 s
[2025-07-23 00:20:52] 2025-07-23 07:20:18,404 | INFO     | . stage-in = 0 s
[2025-07-23 00:20:52] 2025-07-23 07:20:18,404 | INFO     | . payload execution = 46 s
[2025-07-23 00:20:52] 2025-07-23 07:20:18,404 | INFO     | . stage-out = 0 s
[2025-07-23 00:20:52] 2025-07-23 07:20:18,405 | INFO     | . log creation = 0 s
[2025-07-23 00:20:52] 2025-07-23 07:20:18,405 | INFO     | ..............................
[2025-07-23 00:20:52] 2025-07-23 07:20:18,405 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-07-23 00:20:52] 2025-07-23 07:20:18,405 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6741687912/pilotlog.txt
[2025-07-23 00:20:52] 2025-07-23 07:20:18,555 | WARNING  | 
[2025-07-23 00:20:52] [begin log extracts]
[2025-07-23 00:20:52] - Log from pilotlog.txt -
[2025-07-23 00:20:52] 2025-07-23 07:20:18,401 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6741687912/memory_monitor_summary.json (trf name=prmon)
[2025-07-23 00:20:52] 2025-07-23 07:20:18,402 | INFO     | extracted standard info from prmon json
[2025-07-23 00:20:52] 2025-07-23 07:20:18,402 | INFO     | extracted standard memory fields from prmon json
[2025-07-23 00:20:52] 2025-07-23 07:20:18,402 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-23 00:20:52] 2025-07-23 07:20:18,403 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-23 00:20:52] 2025-07-23 07:20:18,403 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-23 00:20:52] 2025-07-23 07:20:18,404 | WARNING  | wrong length of table data, x=[1753255056.0], y=[1861.0] (must be same and length>=4)
[2025-07-23 00:20:52] 2025-07-23 07:20:18,404 | INFO     | could have reported an average CPU frequency of 2095 MHz (4 samples)
[2025-07-23 00:20:52] 2025-07-23 07:20:18,404 | INFO     | ..............................
[2025-07-23 00:20:52] 2025-07-23 07:20:18,404 | INFO     | . Timing measurements:
[2025-07-23 00:20:52] 2025-07-23 07:20:18,404 | INFO     | . get job = 0 s
[2025-07-23 00:20:52] 2025-07-23 07:20:18,404 | INFO     | . initial setup = 3 s
[2025-07-23 00:20:52] 2025-07-23 07:20:18,404 | INFO     | . payload setup = 10 s
[2025-07-23 00:20:52] 2025-07-23 07:20:18,404 | INFO     | . stage-in = 0 s
[2025-07-23 00:20:52] 2025-07-23 07:20:18,404 | INFO     | . payload execution = 46 s
[2025-07-23 00:20:52] 2025-07-23 07:20:18,404 | INFO     | . stage-out = 0 s
[2025-07-23 00:20:52] 2025-07-23 07:20:18,405 | INFO     | . log creation = 0 s
[2025-07-23 00:20:52] 2025-07-23 07:20:18,405 | INFO     | ..............................
[2025-07-23 00:20:52] 2025-07-23 07:20:18,405 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-07-23 00:20:52] 2025-07-23 07:20:18,405 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6741687912/pilotlog.txt
[2025-07-23 00:20:52] [end log extracts]
[2025-07-23 00:20:52] 2025-07-23 07:20:18,555 | WARNING  | pilotErrorCodes = [1305] (will report primary/first error code)
[2025-07-23 00:20:52] 2025-07-23 07:20:18,556 | WARNING  | pilotErrorDiags = ['Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return c
[2025-07-23 00:20:52] 2025-07-23 07:20:18,857 | INFO     | 
[2025-07-23 00:20:52] 2025-07-23 07:20:18,857 | INFO     | job summary report
[2025-07-23 00:20:52] 2025-07-23 07:20:18,857 | INFO     | --------------------------------------------------
[2025-07-23 00:20:52] 2025-07-23 07:20:18,857 | INFO     | PanDA job id: 6741687912
[2025-07-23 00:20:52] 2025-07-23 07:20:18,857 | INFO     | task id: 45697523
[2025-07-23 00:20:52] 2025-07-23 07:20:18,857 | INFO     | error 1/1: 1305: Failed to execute payload:PyJobTransforms.transform.execute 2025-07-23 00:18:04,618 CRITICAL Transform executor raised TransformValidationExceptio
[2025-07-23 00:20:52] 2025-07-23 07:20:18,858 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-23 00:20:52] 2025-07-23 07:20:18,858 | INFO     | pilot state: failed 
[2025-07-23 00:20:52] 2025-07-23 07:20:18,858 | INFO     | transexitcode: 65
[2025-07-23 00:20:52] 2025-07-23 07:20:18,858 | INFO     | exeerrorcode: 65
[2025-07-23 00:20:52] 2025-07-23 07:20:18,858 | INFO     | exeerrordiag: Non-zero return code from EVNTtoHITS (1)
[2025-07-23 00:20:52] 2025-07-23 07:20:18,858 | INFO     | exitcode: 65
[2025-07-23 00:20:52] 2025-07-23 07:20:18,858 | INFO     | exitmsg: Non-zero return code from EVNTtoHITS (1)
[2025-07-23 00:20:52] 2025-07-23 07:20:18,858 | INFO     | cpuconsumptiontime: 18 s
[2025-07-23 00:20:52] 2025-07-23 07:20:18,858 | INFO     | nevents: 0
[2025-07-23 00:20:52] 2025-07-23 07:20:18,858 | INFO     | neventsw: 0
[2025-07-23 00:20:52] 2025-07-23 07:20:18,858 | INFO     | pid: 1039244
[2025-07-23 00:20:52] 2025-07-23 07:20:18,858 | INFO     | pgrp: 1039244
[2025-07-23 00:20:52] 2025-07-23 07:20:18,858 | INFO     | corecount: 8
[2025-07-23 00:20:52] 2025-07-23 07:20:18,858 | INFO     | event service: False
[2025-07-23 00:20:52] 2025-07-23 07:20:18,859 | INFO     | sizes: {0: 2397550, 8: 2397812, 11: 2397840, 61: 2425306, 184: 2425504}
[2025-07-23 00:20:52] 2025-07-23 07:20:18,859 | INFO     | --------------------------------------------------
[2025-07-23 00:20:52] 2025-07-23 07:20:18,859 | INFO     | 
[2025-07-23 00:20:52] 2025-07-23 07:20:18,859 | INFO     | executing command: ls -lF /home/boinc/slots/0
[2025-07-23 00:20:52] 2025-07-23 07:20:18,887 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-23 00:20:52] 2025-07-23 07:20:18,887 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-23 00:20:52] 2025-07-23 07:20:18,887 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-23 00:20:52] 2025-07-23 07:20:18,888 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-23 00:20:52] 2025-07-23 07:20:18,888 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-23 00:20:52] 2025-07-23 07:20:18,888 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-23 00:20:52] 2025-07-23 07:20:18,888 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-23 00:20:52] 2025-07-23 07:20:18,888 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-23 00:20:52] 2025-07-23 07:20:18,888 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-23 00:20:52] 2025-07-23 07:20:18,888 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-23 00:20:52] 2025-07-23 07:20:18,888 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-23 00:20:52] 2025-07-23 07:20:18,888 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-23 00:20:52] 2025-07-23 07:20:18,888 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-23 00:20:52] 2025-07-23 07:20:18,888 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-23 00:20:52] 2025-07-23 07:20:18,888 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-23 00:20:52] 2025-07-23 07:20:18,888 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-23 00:20:52] 2025-07-23 07:20:18,888 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-23 00:20:52] 2025-07-23 07:20:18,889 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-23 00:20:52] 2025-07-23 07:20:18,889 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-23 00:20:52] 2025-07-23 07:20:18,889 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-23 00:20:52] 2025-07-23 07:20:18,889 | INFO     | job 6741687912 has completed (purged errors)
[2025-07-23 00:20:52] 2025-07-23 07:20:18,889 | INFO     | overall cleanup function is called
[2025-07-23 00:20:52] 2025-07-23 07:20:18,910 | INFO     | PID=1025704 has CPU usage=2.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-07-23 00:20:52] 2025-07-23 07:20:18,910 | INFO     | .. there are 19 such processes running
[2025-07-23 00:20:52] 2025-07-23 07:20:19,909 | INFO     | --- collectZombieJob: --- 10, [1039244]
[2025-07-23 00:20:52] 2025-07-23 07:20:19,909 | INFO     | zombie collector waiting for pid 1039244
[2025-07-23 00:20:52] 2025-07-23 07:20:19,909 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-23 00:20:52] 2025-07-23 07:20:19,909 | INFO     | collected zombie processes
[2025-07-23 00:20:52] 2025-07-23 07:20:19,910 | INFO     | will attempt to kill all subprocesses of pid=1039244
[2025-07-23 00:20:52] 2025-07-23 07:20:20,320 | INFO     | process IDs to be killed: [1039244] (in reverse order)
[2025-07-23 00:20:52] 2025-07-23 07:20:20,513 | WARNING  | found no corresponding commands to process id(s)
[2025-07-23 00:20:52] 2025-07-23 07:20:20,513 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-23 00:20:52] 2025-07-23 07:20:20,541 | INFO     | did not find any defunct processes belonging to 1039244
[2025-07-23 00:20:52] 2025-07-23 07:20:20,590 | INFO     | did not find any defunct processes belonging to 1039244
[2025-07-23 00:20:52] 2025-07-23 07:20:20,591 | INFO     | ready for new job
[2025-07-23 00:20:52] 2025-07-23 07:20:20,591 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-23 00:20:52] 2025-07-23 07:20:20,606 | INFO     | ***************************************
[2025-07-23 00:20:52] 2025-07-23 07:20:20,606 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-23 00:20:52] 2025-07-23 07:20:20,606 | INFO     | ***************************************
[2025-07-23 00:20:52] 2025-07-23 07:20:20,607 | INFO     | 
[2025-07-23 00:20:52] 2025-07-23 07:20:20,620 | INFO     | architecture information:
[2025-07-23 00:20:52] 2025-07-23 07:20:20,627 | INFO     | executing command: cat /etc/os-release
[2025-07-23 00:20:52] 2025-07-23 07:20:20,676 | INFO     | cat /etc/os-release:
[2025-07-23 00:20:52] NAME="CentOS Linux"
[2025-07-23 00:20:52] VERSION="7 (Core)"
[2025-07-23 00:20:52] ID="centos"
[2025-07-23 00:20:52] ID_LIKE="rhel fedora"
[2025-07-23 00:20:52] VERSION_ID="7"
[2025-07-23 00:20:52] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-23 00:20:52] ANSI_COLOR="0;31"
[2025-07-23 00:20:52] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-23 00:20:52] HOME_URL="https://www.centos.org/"
[2025-07-23 00:20:52] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-23 00:20:52] 
[2025-07-23 00:20:52] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-23 00:20:52] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-23 00:20:52] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-23 00:20:52] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-23 00:20:52] 
[2025-07-23 00:20:52] 2025-07-23 07:20:20,677 | INFO     | ***************************************
[2025-07-23 00:20:52] 2025-07-23 07:20:21,179 | INFO     | executing command: df -mP /home/boinc/slots/0
[2025-07-23 00:20:52] 2025-07-23 07:20:21,193 | INFO     | sufficient remaining disk space (1368991465472 B)
[2025-07-23 00:20:52] 2025-07-23 07:20:21,194 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-23 00:20:52] 2025-07-23 07:20:21,194 | INFO     | current server update state: UPDATING_FINAL
[2025-07-23 00:20:52] 2025-07-23 07:20:21,194 | INFO     | update_server=False
[2025-07-23 00:20:52] 2025-07-23 07:20:21,194 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-23 00:20:52] 2025-07-23 07:20:21,195 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-23 00:20:52] 2025-07-23 07:20:21,195 | INFO     | aborting loop
[2025-07-23 00:20:52] 2025-07-23 07:20:21,463 | INFO     | all job control threads have been joined
[2025-07-23 00:20:52] 2025-07-23 07:20:22,151 | INFO     | all data control threads have been joined
[2025-07-23 00:20:52] 2025-07-23 07:20:22,200 | INFO     | [job] retrieve thread has finished
[2025-07-23 00:20:52] 2025-07-23 07:20:22,201 | INFO     | [job] job monitor thread has finished
[2025-07-23 00:20:52] 2025-07-23 07:20:22,221 | INFO     | [payload] failed_post thread has finished
[2025-07-23 00:20:52] 2025-07-23 07:20:22,227 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-23 00:20:52] 2025-07-23 07:20:22,442 | INFO     | [data] copytool_in thread has finished
[2025-07-23 00:20:52] 2025-07-23 07:20:22,467 | INFO     | [job] control thread has finished
[2025-07-23 00:20:52] 2025-07-23 07:20:22,550 | INFO     | all payload control threads have been joined
[2025-07-23 00:20:52] 2025-07-23 07:20:22,918 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-23 00:20:52] 2025-07-23 07:20:23,157 | INFO     | [data] control thread has finished
[2025-07-23 00:20:52] 2025-07-23 07:20:23,178 | INFO     | [job] validate thread has finished
[2025-07-23 00:20:52] 2025-07-23 07:20:23,331 | INFO     | [payload] execute_payloads thread has finished
[2025-07-23 00:20:52] 2025-07-23 07:20:23,332 | INFO     | [job] create_data_payload thread has finished
[2025-07-23 00:20:52] 2025-07-23 07:20:23,451 | INFO     | [payload] validate_post thread has finished
[2025-07-23 00:20:52] 2025-07-23 07:20:23,506 | INFO     | [payload] validate_pre thread has finished
[2025-07-23 00:20:52] 2025-07-23 07:20:23,556 | INFO     | [payload] control thread has finished
[2025-07-23 00:20:52] 2025-07-23 07:20:23,872 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-23 00:20:52] 2025-07-23 07:20:24,178 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-23 00:20:52] 2025-07-23 07:20:24,234 | INFO     | [data] copytool_out thread has finished
[2025-07-23 00:20:52] 2025-07-23 07:20:24,893 | INFO     | [job] queue monitor thread has finished
[2025-07-23 00:20:52] 2025-07-23 07:20:28,188 | INFO     | [data] queue_monitor thread has finished
[2025-07-23 00:20:52] 2025-07-23 07:20:30,132 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140604492953408)>', '<ExcThread(monitor, started 140604101076736)>']
[2025-07-23 00:20:52] 2025-07-23 07:20:35,159 | INFO     | all workflow threads have been joined
[2025-07-23 00:20:52] 2025-07-23 07:20:35,159 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-23 00:20:52] 2025-07-23 07:20:35,160 | INFO     | traces error code: 0
[2025-07-23 00:20:52] 2025-07-23 07:20:35,160 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-23 00:20:52] 2025-07-23 07:20:51,545 | INFO     | PID=1025704 has CPU usage=1.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-07-23 00:20:52] 2025-07-23 07:20:51,545 | INFO     | .. there are 19 such processes running
[2025-07-23 00:20:52] 2025-07-23 07:20:51,546 | INFO     | found 0 job(s) in 20 queues
[2025-07-23 00:20:52] 2025-07-23 07:20:51,546 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-23 00:20:52] 2025-07-23 07:20:51,546 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-23 00:20:52] 2025-07-23 07:20:51,546 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-23 00:20:52] 2025-07-23 07:20:51,546 | INFO     | [monitor] control thread has ended
[2025-07-23 00:20:52] 2025-07-23 07:20:52,337 [wrapper] ==== pilot stdout END ====
[2025-07-23 00:20:52] 2025-07-23 07:20:52,359 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-23 00:20:52] 2025-07-23 07:20:52,394 [wrapper] pilotpid: 1025704
[2025-07-23 00:20:52] 2025-07-23 07:20:52,428 [wrapper] Pilot exit status: 0
[2025-07-23 00:20:52] 2025-07-23 07:20:52,508 [wrapper] pandaids: 6741687912
[2025-07-23 00:20:52] 2025-07-23 07:20:52,549 [wrapper] cleanup supervisor_pilot 1025710 1025705
[2025-07-23 00:20:52] 2025-07-23 07:20:52,551 [wrapper] Test setup, not cleaning
[2025-07-23 00:20:52] 2025-07-23 07:20:52,553 [wrapper] apfmon messages muted
[2025-07-23 00:20:52] 2025-07-23 07:20:52,555 [wrapper] ==== wrapper stdout END ====
[2025-07-23 00:20:52] 2025-07-23 07:20:52,556 [wrapper] ==== wrapper stderr END ====
[2025-07-23 00:20:52]  *** Error codes and diagnostics ***
[2025-07-23 00:20:52]     "exeErrorCode": 65,
[2025-07-23 00:20:52]     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (1)",
[2025-07-23 00:20:52]     "pilotErrorCode": 1305,
[2025-07-23 00:20:52]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (1)",
[2025-07-23 00:20:52]  *** Listing of results directory ***
[2025-07-23 00:20:52] total 311404
[2025-07-23 00:20:52] -rw-r--r--. 1 boinc boinc    530466 Jul 21 13:13 pilot3.tar.gz
[2025-07-23 00:20:52] -rwx------. 1 boinc boinc     36292 Jul 21 13:38 runpilot2-wrapper.sh
[2025-07-23 00:20:52] -rw-r--r--. 1 boinc boinc      5112 Jul 21 13:39 queuedata.json
[2025-07-23 00:20:52] -rw-r--r--. 1 boinc boinc       100 Jul 23 00:16 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-23 00:20:52] -rwxr-xr-x. 1 boinc boinc      7986 Jul 23 00:16 run_atlas
[2025-07-23 00:20:52] -rw-r--r--. 1 boinc boinc       105 Jul 23 00:16 job.xml
[2025-07-23 00:20:52] -rw-r--r--. 2 boinc boinc 314800286 Jul 23 00:16 EVNT.45697521._000104.pool.root.1
[2025-07-23 00:20:52] -rw-r--r--. 1 boinc boinc      6449 Jul 23 00:16 init_data.xml
[2025-07-23 00:20:52] -rw-r--r--. 2 boinc boinc     15095 Jul 23 00:16 start_atlas.sh
[2025-07-23 00:20:52] drwxrwx--x. 2 boinc boinc      4096 Jul 23 00:16 shared
[2025-07-23 00:20:52] -rw-r--r--. 2 boinc boinc    542902 Jul 23 00:16 input.tar.gz
[2025-07-23 00:20:52] -rw-r--r--. 1 boinc boinc         0 Jul 23 00:16 boinc_lockfile
[2025-07-23 00:20:52] -rw-r--r--. 1 boinc boinc      2635 Jul 23 00:16 pandaJob.out
[2025-07-23 00:20:52] -rw-------. 1 boinc boinc    977736 Jul 23 00:16 agis_schedconf.cvmfs.json
[2025-07-23 00:20:52] -rw-------. 1 boinc boinc   1593041 Jul 23 00:16 agis_ddmendpoints.agis.ALL.json
[2025-07-23 00:20:52] drwx------. 4 boinc boinc      4096 Jul 23 00:16 pilot3
[2025-07-23 00:20:52] -rw-r--r--. 1 boinc boinc       522 Jul 23 00:18 boinc_task_state.xml
[2025-07-23 00:20:52] -rw-------. 1 boinc boinc       954 Jul 23 00:18 memory_monitor_summary.json
[2025-07-23 00:20:52] -rw-------. 1 boinc boinc     21487 Jul 23 00:18 log.45697523._002599.job.log.tgz.1
[2025-07-23 00:20:52] -rw-------. 1 boinc boinc        95 Jul 23 00:19 pilot_heartbeat.json
[2025-07-23 00:20:52] -rw-------. 1 boinc boinc      8381 Jul 23 00:20 heartbeat.json
[2025-07-23 00:20:52] -rw-r--r--. 1 boinc boinc        22 Jul 23 00:20 wrapper_checkpoint.txt
[2025-07-23 00:20:52] -rw-------. 1 boinc boinc       823 Jul 23 00:20 pilotlog.txt
[2025-07-23 00:20:52] -rw-------. 1 boinc boinc     77964 Jul 23 00:20 log.45697523._002599.job.log.1
[2025-07-23 00:20:52] -rw-r--r--. 1 boinc boinc      8192 Jul 23 00:20 boinc_mmap_file
[2025-07-23 00:20:52] -rw-------. 1 boinc boinc       188 Jul 23 00:20 output.list
[2025-07-23 00:20:52] -rw-r--r--. 1 boinc boinc       620 Jul 23 00:20 runtime_log
[2025-07-23 00:20:52] -rw-------. 1 boinc boinc    122880 Jul 23 00:20 result.tar.gz
[2025-07-23 00:20:52] -rw-r--r--. 1 boinc boinc      8648 Jul 23 00:20 runtime_log.err
[2025-07-23 00:20:52] -rw-------. 1 boinc boinc       647 Jul 23 00:20 auYKDmtSCy7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDm6CGLDmgZ7S5m.diag
[2025-07-23 00:20:52] -rw-r--r--. 1 boinc boinc     22041 Jul 23 00:20 stderr.txt
[2025-07-23 00:20:52] No HITS result produced
[2025-07-23 00:20:52]  *** Contents of shared directory: ***
[2025-07-23 00:20:52] total 308096
[2025-07-23 00:20:52] -rw-r--r--. 2 boinc boinc 314800286 Jul 23 00:16 ATLAS.root_0
[2025-07-23 00:20:52] -rw-r--r--. 2 boinc boinc     15095 Jul 23 00:16 start_atlas.sh
[2025-07-23 00:20:52] -rw-r--r--. 2 boinc boinc    542902 Jul 23 00:16 input.tar.gz
[2025-07-23 00:20:52] -rw-------. 1 boinc boinc    122880 Jul 23 00:20 result.tar.gz
00:20:54 (1022129): run_atlas exited; CPU time 24.708171
00:20:54 (1022129): called boinc_finish(0)

</stderr_txt>
]]>

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