Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
23:52:24 (1330666): wrapper (7.7.26015): starting
23:52:24 (1330666): wrapper: running run_atlas (--nthreads 8)
[2025-07-22 23:52:24] Arguments: --nthreads 8
[2025-07-22 23:52:24] Threads: 8
[2025-07-22 23:52:24] Checking for CVMFS
[2025-07-22 23:52:24] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-22 23:52:25] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-22 23:52:25] Running cvmfs_config stat atlas.cern.ch
[2025-07-22 23:52:25] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-22 23:52:25] 2.11.3.0 22724 472810 160780 148649 0 202 26311616 45568000 10799 130560 0 2526062082 99.768 1950056221 17418 http://cvmfs-s1bnl.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://206.12.9.163:3129 1
[2025-07-22 23:52:25] CVMFS is ok
[2025-07-22 23:52:25] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-07-22 23:52:25] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-07-22 23:52:25] Further information can be found at the LHC@home message board.
[2025-07-22 23:52:25] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-22 23:52:25] Checking for apptainer binary...
[2025-07-22 23:52:25] Using apptainer found in PATH at /usr/bin/apptainer
[2025-07-22 23:52:25] Running /usr/bin/apptainer --version
[2025-07-22 23:52:25] apptainer version 1.3.3-1.el9
[2025-07-22 23:52:25] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-22 23:52:25] WARNING: Environment variable TMPDIR already has value [/home/boinc/slots/0/.apptainertmp], will not forward new value [/home/boinc] from parent process environment wns0020.triumf.lcg
[2025-07-22 23:52:25] apptainer works
[2025-07-22 23:52:25] Set ATHENA_PROC_NUMBER=8
[2025-07-22 23:52:25] Set ATHENA_CORE_NUMBER=8
[2025-07-22 23:52:25] Starting ATLAS job with PandaID=6743007676
[2025-07-22 23:52:25] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-22 23:56:45]  *** The last 200 lines of the pilot log: ***
[2025-07-22 23:56:45] 2025-07-23 06:56:12,927 | INFO     | extracted standard memory fields from prmon json
[2025-07-22 23:56:45] 2025-07-23 06:56:12,927 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-22 23:56:45] 2025-07-23 06:56:12,927 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-22 23:56:45] 2025-07-23 06:56:12,927 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-22 23:56:45] 2025-07-23 06:56:12,928 | WARNING  | wrong length of table data, x=[1753253629.0], y=[1365.0] (must be same and length>=4)
[2025-07-22 23:56:45] 2025-07-23 06:56:12,928 | INFO     | could have reported an average CPU frequency of 2095 MHz (4 samples)
[2025-07-22 23:56:45] 2025-07-23 06:56:12,928 | INFO     | ..............................
[2025-07-22 23:56:45] 2025-07-23 06:56:12,928 | INFO     | . Timing measurements:
[2025-07-22 23:56:45] 2025-07-23 06:56:12,928 | INFO     | . get job = 0 s
[2025-07-22 23:56:45] 2025-07-23 06:56:12,928 | INFO     | . initial setup = 3 s
[2025-07-22 23:56:45] 2025-07-23 06:56:12,928 | INFO     | . payload setup = 16 s
[2025-07-22 23:56:45] 2025-07-23 06:56:12,928 | INFO     | . stage-in = 0 s
[2025-07-22 23:56:45] 2025-07-23 06:56:12,928 | INFO     | . payload execution = 25 s
[2025-07-22 23:56:45] 2025-07-23 06:56:12,929 | INFO     | . stage-out = 0 s
[2025-07-22 23:56:45] 2025-07-23 06:56:12,929 | INFO     | . log creation = 0 s
[2025-07-22 23:56:45] 2025-07-23 06:56:12,929 | INFO     | ..............................
[2025-07-22 23:56:45] 2025-07-23 06:56:12,929 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-07-22 23:56:45] 2025-07-23 06:56:12,929 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6743007676/pilotlog.txt
[2025-07-22 23:56:45] 2025-07-23 06:56:12,936 | WARNING  | detected the following tail of warning/fatal messages in the pilot log:
[2025-07-22 23:56:45] - Log from pilotlog.txt -
[2025-07-22 23:56:45] 2025-07-23 06:56:12,926 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6743007676/memory_monitor_summary.json (trf name=prmon)
[2025-07-22 23:56:45] 2025-07-23 06:56:12,926 | INFO     | extracted standard info from prmon json
[2025-07-22 23:56:45] 2025-07-23 06:56:12,927 | INFO     | extracted standard memory fields from prmon json
[2025-07-22 23:56:45] 2025-07-23 06:56:12,927 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-22 23:56:45] 2025-07-23 06:56:12,927 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-22 23:56:45] 2025-07-23 06:56:12,927 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-22 23:56:45] 2025-07-23 06:56:12,928 | WARNING  | wrong length of table data, x=[1753253629.0], y=[1365.0] (must be same and length>=4)
[2025-07-22 23:56:45] 2025-07-23 06:56:12,928 | INFO     | could have reported an average CPU frequency of 2095 MHz (4 samples)
[2025-07-22 23:56:45] 2025-07-23 06:56:12,928 | INFO     | ..............................
[2025-07-22 23:56:45] 2025-07-23 06:56:12,928 | INFO     | . Timing measurements:
[2025-07-22 23:56:45] 2025-07-23 06:56:12,928 | INFO     | . get job = 0 s
[2025-07-22 23:56:45] 2025-07-23 06:56:12,928 | INFO     | . initial setup = 3 s
[2025-07-22 23:56:45] 2025-07-23 06:56:12,928 | INFO     | . payload setup = 16 s
[2025-07-22 23:56:45] 2025-07-23 06:56:12,928 | INFO     | . stage-in = 0 s
[2025-07-22 23:56:45] 2025-07-23 06:56:12,928 | INFO     | . payload execution = 25 s
[2025-07-22 23:56:45] 2025-07-23 06:56:12,929 | INFO     | . stage-out = 0 s
[2025-07-22 23:56:45] 2025-07-23 06:56:12,929 | INFO     | . log creation = 0 s
[2025-07-22 23:56:45] 2025-07-23 06:56:12,929 | INFO     | ..............................
[2025-07-22 23:56:45] 2025-07-23 06:56:12,929 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-07-22 23:56:45] 2025-07-23 06:56:12,929 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6743007676/pilotlog.txt
[2025-07-22 23:56:45] 2025-07-23 06:56:12,937 | WARNING  | 
[2025-07-22 23:56:45] [begin log extracts]
[2025-07-22 23:56:45] - Log from pilotlog.txt -
[2025-07-22 23:56:45] 2025-07-23 06:56:12,926 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6743007676/memory_monitor_summary.json (trf name=prmon)
[2025-07-22 23:56:45] 2025-07-23 06:56:12,926 | INFO     | extracted standard info from prmon json
[2025-07-22 23:56:45] 2025-07-23 06:56:12,927 | INFO     | extracted standard memory fields from prmon json
[2025-07-22 23:56:45] 2025-07-23 06:56:12,927 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-22 23:56:45] 2025-07-23 06:56:12,927 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-22 23:56:45] 2025-07-23 06:56:12,927 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-22 23:56:45] 2025-07-23 06:56:12,928 | WARNING  | wrong length of table data, x=[1753253629.0], y=[1365.0] (must be same and length>=4)
[2025-07-22 23:56:45] 2025-07-23 06:56:12,928 | INFO     | could have reported an average CPU frequency of 2095 MHz (4 samples)
[2025-07-22 23:56:45] 2025-07-23 06:56:12,928 | INFO     | ..............................
[2025-07-22 23:56:45] 2025-07-23 06:56:12,928 | INFO     | . Timing measurements:
[2025-07-22 23:56:45] 2025-07-23 06:56:12,928 | INFO     | . get job = 0 s
[2025-07-22 23:56:45] 2025-07-23 06:56:12,928 | INFO     | . initial setup = 3 s
[2025-07-22 23:56:45] 2025-07-23 06:56:12,928 | INFO     | . payload setup = 16 s
[2025-07-22 23:56:45] 2025-07-23 06:56:12,928 | INFO     | . stage-in = 0 s
[2025-07-22 23:56:45] 2025-07-23 06:56:12,928 | INFO     | . payload execution = 25 s
[2025-07-22 23:56:45] 2025-07-23 06:56:12,929 | INFO     | . stage-out = 0 s
[2025-07-22 23:56:45] 2025-07-23 06:56:12,929 | INFO     | . log creation = 0 s
[2025-07-22 23:56:45] 2025-07-23 06:56:12,929 | INFO     | ..............................
[2025-07-22 23:56:45] 2025-07-23 06:56:12,929 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-07-22 23:56:45] 2025-07-23 06:56:12,929 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6743007676/pilotlog.txt
[2025-07-22 23:56:45] [end log extracts]
[2025-07-22 23:56:45] 2025-07-23 06:56:12,937 | WARNING  | pilotErrorCodes = [1305] (will report primary/first error code)
[2025-07-22 23:56:45] 2025-07-23 06:56:12,938 | WARNING  | pilotErrorDiags = ['Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return c
[2025-07-22 23:56:45] 2025-07-23 06:56:13,511 | INFO     | 
[2025-07-22 23:56:45] 2025-07-23 06:56:13,512 | INFO     | job summary report
[2025-07-22 23:56:45] 2025-07-23 06:56:13,512 | INFO     | --------------------------------------------------
[2025-07-22 23:56:45] 2025-07-23 06:56:13,512 | INFO     | PanDA job id: 6743007676
[2025-07-22 23:56:45] 2025-07-23 06:56:13,512 | INFO     | task id: 45697541
[2025-07-22 23:56:45] 2025-07-23 06:56:13,512 | INFO     | error 1/1: 1305: Failed to execute payload:PyJobTransforms.transform.execute 2025-07-22 23:54:01,819 CRITICAL Transform executor raised TransformValidationExceptio
[2025-07-22 23:56:45] 2025-07-23 06:56:13,512 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-22 23:56:45] 2025-07-23 06:56:13,512 | INFO     | pilot state: failed 
[2025-07-22 23:56:45] 2025-07-23 06:56:13,512 | INFO     | transexitcode: 65
[2025-07-22 23:56:45] 2025-07-23 06:56:13,512 | INFO     | exeerrorcode: 65
[2025-07-22 23:56:45] 2025-07-23 06:56:13,512 | INFO     | exeerrordiag: Non-zero return code from EVNTtoHITS (1)
[2025-07-22 23:56:45] 2025-07-23 06:56:13,512 | INFO     | exitcode: 65
[2025-07-22 23:56:45] 2025-07-23 06:56:13,512 | INFO     | exitmsg: Non-zero return code from EVNTtoHITS (1)
[2025-07-22 23:56:45] 2025-07-23 06:56:13,513 | INFO     | cpuconsumptiontime: 16 s
[2025-07-22 23:56:45] 2025-07-23 06:56:13,513 | INFO     | nevents: 0
[2025-07-22 23:56:45] 2025-07-23 06:56:13,513 | INFO     | neventsw: 0
[2025-07-22 23:56:45] 2025-07-23 06:56:13,513 | INFO     | pid: 1340568
[2025-07-22 23:56:45] 2025-07-23 06:56:13,513 | INFO     | pgrp: 1340568
[2025-07-22 23:56:45] 2025-07-23 06:56:13,513 | INFO     | corecount: 8
[2025-07-22 23:56:45] 2025-07-23 06:56:13,513 | INFO     | event service: False
[2025-07-22 23:56:45] 2025-07-23 06:56:13,513 | INFO     | sizes: {0: 2397341, 1: 2397540, 12: 2397540, 16: 2397830, 23: 2397858, 46: 2421218, 47: 2425510, 51: 2425566, 169: 2425732}
[2025-07-22 23:56:45] 2025-07-23 06:56:13,513 | INFO     | --------------------------------------------------
[2025-07-22 23:56:45] 2025-07-23 06:56:13,513 | INFO     | 
[2025-07-22 23:56:45] 2025-07-23 06:56:13,513 | INFO     | executing command: ls -lF /home/boinc/slots/0
[2025-07-22 23:56:45] 2025-07-23 06:56:13,530 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-22 23:56:45] 2025-07-23 06:56:13,530 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-22 23:56:45] 2025-07-23 06:56:13,530 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-22 23:56:45] 2025-07-23 06:56:13,530 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-22 23:56:45] 2025-07-23 06:56:13,530 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-22 23:56:45] 2025-07-23 06:56:13,531 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-22 23:56:45] 2025-07-23 06:56:13,531 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-22 23:56:45] 2025-07-23 06:56:13,531 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-22 23:56:45] 2025-07-23 06:56:13,531 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-22 23:56:45] 2025-07-23 06:56:13,531 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-22 23:56:45] 2025-07-23 06:56:13,531 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-22 23:56:45] 2025-07-23 06:56:13,531 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-22 23:56:45] 2025-07-23 06:56:13,531 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-22 23:56:45] 2025-07-23 06:56:13,531 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-22 23:56:45] 2025-07-23 06:56:13,531 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-22 23:56:45] 2025-07-23 06:56:13,531 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-22 23:56:45] 2025-07-23 06:56:13,531 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-22 23:56:45] 2025-07-23 06:56:13,531 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-22 23:56:45] 2025-07-23 06:56:13,531 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-22 23:56:45] 2025-07-23 06:56:13,532 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-22 23:56:45] 2025-07-23 06:56:13,532 | INFO     | job 6743007676 has completed (purged errors)
[2025-07-22 23:56:45] 2025-07-23 06:56:13,532 | INFO     | overall cleanup function is called
[2025-07-22 23:56:45] 2025-07-23 06:56:14,539 | INFO     | --- collectZombieJob: --- 10, [1340568]
[2025-07-22 23:56:45] 2025-07-23 06:56:14,539 | INFO     | zombie collector waiting for pid 1340568
[2025-07-22 23:56:45] 2025-07-23 06:56:14,539 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-22 23:56:45] 2025-07-23 06:56:14,539 | INFO     | collected zombie processes
[2025-07-22 23:56:45] 2025-07-23 06:56:14,539 | INFO     | will attempt to kill all subprocesses of pid=1340568
[2025-07-22 23:56:45] 2025-07-23 06:56:14,705 | INFO     | process IDs to be killed: [1340568] (in reverse order)
[2025-07-22 23:56:45] 2025-07-23 06:56:14,758 | WARNING  | found no corresponding commands to process id(s)
[2025-07-22 23:56:45] 2025-07-23 06:56:14,759 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-22 23:56:45] 2025-07-23 06:56:14,765 | INFO     | did not find any defunct processes belonging to 1340568
[2025-07-22 23:56:45] 2025-07-23 06:56:14,770 | INFO     | did not find any defunct processes belonging to 1340568
[2025-07-22 23:56:45] 2025-07-23 06:56:14,770 | INFO     | ready for new job
[2025-07-22 23:56:45] 2025-07-23 06:56:14,770 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-22 23:56:45] 2025-07-23 06:56:14,771 | INFO     | ***************************************
[2025-07-22 23:56:45] 2025-07-23 06:56:14,772 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-22 23:56:45] 2025-07-23 06:56:14,772 | INFO     | ***************************************
[2025-07-22 23:56:45] 2025-07-23 06:56:14,772 | INFO     | 
[2025-07-22 23:56:45] 2025-07-23 06:56:14,784 | INFO     | architecture information:
[2025-07-22 23:56:45] 2025-07-23 06:56:14,785 | INFO     | executing command: cat /etc/os-release
[2025-07-22 23:56:45] 2025-07-23 06:56:14,795 | INFO     | cat /etc/os-release:
[2025-07-22 23:56:45] NAME="CentOS Linux"
[2025-07-22 23:56:45] VERSION="7 (Core)"
[2025-07-22 23:56:45] ID="centos"
[2025-07-22 23:56:45] ID_LIKE="rhel fedora"
[2025-07-22 23:56:45] VERSION_ID="7"
[2025-07-22 23:56:45] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-22 23:56:45] ANSI_COLOR="0;31"
[2025-07-22 23:56:45] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-22 23:56:45] HOME_URL="https://www.centos.org/"
[2025-07-22 23:56:45] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-22 23:56:45] 
[2025-07-22 23:56:45] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-22 23:56:45] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-22 23:56:45] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-22 23:56:45] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-22 23:56:45] 
[2025-07-22 23:56:45] 2025-07-23 06:56:14,795 | INFO     | ***************************************
[2025-07-22 23:56:45] 2025-07-23 06:56:15,297 | INFO     | executing command: df -mP /home/boinc/slots/0
[2025-07-22 23:56:45] 2025-07-23 06:56:15,309 | INFO     | sufficient remaining disk space (1393747296256 B)
[2025-07-22 23:56:45] 2025-07-23 06:56:15,309 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-22 23:56:45] 2025-07-23 06:56:15,309 | INFO     | current server update state: UPDATING_FINAL
[2025-07-22 23:56:45] 2025-07-23 06:56:15,309 | INFO     | update_server=False
[2025-07-22 23:56:45] 2025-07-23 06:56:15,309 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-22 23:56:45] 2025-07-23 06:56:15,344 | INFO     | all data control threads have been joined
[2025-07-22 23:56:45] 2025-07-23 06:56:15,619 | INFO     | all payload control threads have been joined
[2025-07-22 23:56:45] 2025-07-23 06:56:15,814 | INFO     | all job control threads have been joined
[2025-07-22 23:56:45] 2025-07-23 06:56:16,211 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-22 23:56:45] 2025-07-23 06:56:16,211 | INFO     | aborting loop
[2025-07-22 23:56:45] 2025-07-23 06:56:16,314 | INFO     | [job] retrieve thread has finished
[2025-07-22 23:56:45] 2025-07-23 06:56:16,350 | INFO     | [data] control thread has finished
[2025-07-22 23:56:45] 2025-07-23 06:56:16,624 | INFO     | [payload] control thread has finished
[2025-07-22 23:56:45] 2025-07-23 06:56:16,768 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-22 23:56:45] 2025-07-23 06:56:16,771 | INFO     | [payload] failed_post thread has finished
[2025-07-22 23:56:45] 2025-07-23 06:56:16,819 | INFO     | [job] control thread has finished
[2025-07-22 23:56:45] 2025-07-23 06:56:16,998 | INFO     | [payload] validate_pre thread has finished
[2025-07-22 23:56:45] 2025-07-23 06:56:17,060 | INFO     | [data] copytool_in thread has finished
[2025-07-22 23:56:45] 2025-07-23 06:56:17,216 | INFO     | [job] job monitor thread has finished
[2025-07-22 23:56:45] 2025-07-23 06:56:17,574 | INFO     | [payload] validate_post thread has finished
[2025-07-22 23:56:45] 2025-07-23 06:56:17,581 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-22 23:56:45] 2025-07-23 06:56:17,774 | INFO     | [payload] execute_payloads thread has finished
[2025-07-22 23:56:45] 2025-07-23 06:56:17,775 | INFO     | [job] validate thread has finished
[2025-07-22 23:56:45] 2025-07-23 06:56:17,776 | INFO     | [job] create_data_payload thread has finished
[2025-07-22 23:56:45] 2025-07-23 06:56:17,968 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-22 23:56:45] 2025-07-23 06:56:18,020 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-22 23:56:45] 2025-07-23 06:56:18,773 | INFO     | [data] copytool_out thread has finished
[2025-07-22 23:56:45] 2025-07-23 06:56:19,025 | INFO     | [job] queue monitor thread has finished
[2025-07-22 23:56:45] 2025-07-23 06:56:21,973 | INFO     | [data] queue_monitor thread has finished
[2025-07-22 23:56:45] 2025-07-23 06:56:22,116 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139647172958016)>', '<ExcThread(monitor, started 139646853945088)>']
[2025-07-22 23:56:45] 2025-07-23 06:56:27,141 | INFO     | all workflow threads have been joined
[2025-07-22 23:56:45] 2025-07-23 06:56:27,141 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-22 23:56:45] 2025-07-23 06:56:27,142 | INFO     | traces error code: 0
[2025-07-22 23:56:45] 2025-07-23 06:56:27,142 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-22 23:56:45] 2025-07-23 06:56:45,155 | INFO     | PID=1334244 has CPU usage=1.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-07-22 23:56:45] 2025-07-23 06:56:45,156 | INFO     | .. there are 19 such processes running
[2025-07-22 23:56:45] 2025-07-23 06:56:45,156 | INFO     | found 0 job(s) in 20 queues
[2025-07-22 23:56:45] 2025-07-23 06:56:45,156 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-22 23:56:45] 2025-07-23 06:56:45,156 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-22 23:56:45] 2025-07-23 06:56:45,156 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-22 23:56:45] 2025-07-23 06:56:45,156 | INFO     | [monitor] control thread has ended
[2025-07-22 23:56:45] 2025-07-23 06:56:45,304 [wrapper] ==== pilot stdout END ====
[2025-07-22 23:56:45] 2025-07-23 06:56:45,307 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-22 23:56:45] 2025-07-23 06:56:45,309 [wrapper] pilotpid: 1334244
[2025-07-22 23:56:45] 2025-07-23 06:56:45,311 [wrapper] Pilot exit status: 0
[2025-07-22 23:56:45] 2025-07-23 06:56:45,319 [wrapper] pandaids: 6743007676
[2025-07-22 23:56:45] 2025-07-23 06:56:45,352 [wrapper] cleanup supervisor_pilot 1334250 1334245
[2025-07-22 23:56:45] 2025-07-23 06:56:45,355 [wrapper] Test setup, not cleaning
[2025-07-22 23:56:45] 2025-07-23 06:56:45,357 [wrapper] apfmon messages muted
[2025-07-22 23:56:45] 2025-07-23 06:56:45,359 [wrapper] ==== wrapper stdout END ====
[2025-07-22 23:56:45] 2025-07-23 06:56:45,362 [wrapper] ==== wrapper stderr END ====
[2025-07-22 23:56:45]  *** Error codes and diagnostics ***
[2025-07-22 23:56:45]     "exeErrorCode": 65,
[2025-07-22 23:56:45]     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (1)",
[2025-07-22 23:56:45]     "pilotErrorCode": 1305,
[2025-07-22 23:56:45]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (1)",
[2025-07-22 23:56:45]  *** Listing of results directory ***
[2025-07-22 23:56:45] total 337988
[2025-07-22 23:56:45] -rw-r--r--. 1 boinc boinc    530466 Jul 22 19:25 pilot3.tar.gz
[2025-07-22 23:56:45] -rw-r--r--. 1 boinc boinc      5112 Jul 22 20:07 queuedata.json
[2025-07-22 23:56:45] -rwx------. 1 boinc boinc     36292 Jul 22 20:10 runpilot2-wrapper.sh
[2025-07-22 23:56:45] -rw-r--r--. 1 boinc boinc       100 Jul 22 23:52 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-22 23:56:45] -rwxr-xr-x. 1 boinc boinc      7986 Jul 22 23:52 run_atlas
[2025-07-22 23:56:45] -rw-r--r--. 1 boinc boinc       105 Jul 22 23:52 job.xml
[2025-07-22 23:56:45] -rw-r--r--. 2 boinc boinc 342023268 Jul 22 23:52 EVNT.45697539._000169.pool.root.1
[2025-07-22 23:56:45] -rw-r--r--. 1 boinc boinc      6449 Jul 22 23:52 init_data.xml
[2025-07-22 23:56:45] -rw-r--r--. 2 boinc boinc     15095 Jul 22 23:52 start_atlas.sh
[2025-07-22 23:56:45] drwxrwx--x. 2 boinc boinc      4096 Jul 22 23:52 shared
[2025-07-22 23:56:45] -rw-r--r--. 2 boinc boinc    542904 Jul 22 23:52 input.tar.gz
[2025-07-22 23:56:45] -rw-r--r--. 1 boinc boinc         0 Jul 22 23:52 boinc_lockfile
[2025-07-22 23:56:45] -rw-r--r--. 1 boinc boinc      2601 Jul 22 23:52 pandaJob.out
[2025-07-22 23:56:45] -rw-------. 1 boinc boinc    977736 Jul 22 23:52 agis_schedconf.cvmfs.json
[2025-07-22 23:56:45] -rw-------. 1 boinc boinc   1593041 Jul 22 23:52 agis_ddmendpoints.agis.ALL.json
[2025-07-22 23:56:45] drwx------. 4 boinc boinc      4096 Jul 22 23:52 pilot3
[2025-07-22 23:56:45] -rw-r--r--. 1 boinc boinc       521 Jul 22 23:54 boinc_task_state.xml
[2025-07-22 23:56:45] -rw-------. 1 boinc boinc       954 Jul 22 23:54 memory_monitor_summary.json
[2025-07-22 23:56:45] -rw-------. 1 boinc boinc     21209 Jul 22 23:54 log.45697541._005067.job.log.tgz.1
[2025-07-22 23:56:45] -rw-------. 1 boinc boinc        95 Jul 22 23:55 pilot_heartbeat.json
[2025-07-22 23:56:45] -rw-------. 1 boinc boinc      8388 Jul 22 23:56 heartbeat.json
[2025-07-22 23:56:45] -rw-r--r--. 1 boinc boinc      8192 Jul 22 23:56 boinc_mmap_file
[2025-07-22 23:56:45] -rw-r--r--. 1 boinc boinc        22 Jul 22 23:56 wrapper_checkpoint.txt
[2025-07-22 23:56:45] -rw-------. 1 boinc boinc       823 Jul 22 23:56 pilotlog.txt
[2025-07-22 23:56:45] -rw-------. 1 boinc boinc     78171 Jul 22 23:56 log.45697541._005067.job.log.1
[2025-07-22 23:56:45] -rw-------. 1 boinc boinc       188 Jul 22 23:56 output.list
[2025-07-22 23:56:45] -rw-r--r--. 1 boinc boinc       620 Jul 22 23:56 runtime_log
[2025-07-22 23:56:45] -rw-------. 1 boinc boinc    122880 Jul 22 23:56 result.tar.gz
[2025-07-22 23:56:45] -rw-r--r--. 1 boinc boinc      8648 Jul 22 23:56 runtime_log.err
[2025-07-22 23:56:45] -rw-------. 1 boinc boinc       645 Jul 22 23:56 LLMNDmA3ey7n9Rq4apOajLDm4fhM0noT9bVof3QYDmkjvKDmxI9ELm.diag
[2025-07-22 23:56:45] -rw-r--r--. 1 boinc boinc     21980 Jul 22 23:56 stderr.txt
[2025-07-22 23:56:45] No HITS result produced
[2025-07-22 23:56:45]  *** Contents of shared directory: ***
[2025-07-22 23:56:45] total 334680
[2025-07-22 23:56:45] -rw-r--r--. 2 boinc boinc 342023268 Jul 22 23:52 ATLAS.root_0
[2025-07-22 23:56:45] -rw-r--r--. 2 boinc boinc     15095 Jul 22 23:52 start_atlas.sh
[2025-07-22 23:56:45] -rw-r--r--. 2 boinc boinc    542904 Jul 22 23:52 input.tar.gz
[2025-07-22 23:56:45] -rw-------. 1 boinc boinc    122880 Jul 22 23:56 result.tar.gz
23:56:46 (1330666): run_atlas exited; CPU time 23.532172
23:56:46 (1330666): called boinc_finish(0)

</stderr_txt>
]]>

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