Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
16:37:18 (1891): wrapper (7.7.26015): starting
16:37:18 (1891): wrapper: running run_atlas (--nthreads 8)
[2025-07-23 16:37:18] Arguments: --nthreads 8
[2025-07-23 16:37:18] Threads: 8
[2025-07-23 16:37:18] Checking for CVMFS
[2025-07-23 16:37:20] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-23 16:37:21] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-23 16:37:21] Running cvmfs_config stat atlas.cern.ch
[2025-07-23 16:37:22] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-23 16:37:22] 2.11.2.0 22738 103912 135416 148661 2 65 22673689 25165824 2705 130560 0 79448315 99.870 46675654 3379 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-07-23 16:37:22] CVMFS is ok
[2025-07-23 16:37:22] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-23 16:37:22] Checking for apptainer binary...
[2025-07-23 16:37:22] Using apptainer found in PATH at /usr/bin/apptainer
[2025-07-23 16:37:22] Running /usr/bin/apptainer --version
[2025-07-23 16:37:22] apptainer version 1.3.2-1.el7
[2025-07-23 16:37:22] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-23 16:39:53] cg-vwn395.simple-grid.lan
[2025-07-23 16:39:53] apptainer works
[2025-07-23 16:39:53] Set ATHENA_PROC_NUMBER=8
[2025-07-23 16:39:53] Set ATHENA_CORE_NUMBER=8
[2025-07-23 16:39:53] Starting ATLAS job with PandaID=6741854699
[2025-07-23 16:39:53] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/7 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-24 00:31:46]  *** The last 200 lines of the pilot log: ***
[2025-07-24 00:31:46] 2025-07-23 21:15:36,498 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-24 00:31:46] 2025-07-23 21:15:36,498 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-24 00:31:46] 2025-07-23 21:15:36,505 | INFO     | fitting pss+swap vs Time
[2025-07-24 00:31:46] 2025-07-23 21:15:36,506 | INFO     | sum of square deviations: 17972496978.0
[2025-07-24 00:31:46] 2025-07-23 21:15:36,524 | INFO     | sum of deviations: -13877539894.000008
[2025-07-24 00:31:46] 2025-07-23 21:15:36,525 | INFO     | mean x: 1753293450.0
[2025-07-24 00:31:46] 2025-07-23 21:15:36,525 | INFO     | mean y: 2557371.7390180877
[2025-07-24 00:31:46] 2025-07-23 21:15:36,525 | INFO     | -- intersect: 1356370357.661219
[2025-07-24 00:31:46] 2025-07-23 21:15:36,525 | INFO     | intersect: 1356370357.661219
[2025-07-24 00:31:46] 2025-07-23 21:15:36,526 | INFO     | chi2: 3.483934999078272
[2025-07-24 00:31:46] 2025-07-23 21:15:36,526 | INFO     | sum of square deviations: 17284846875.5
[2025-07-24 00:31:46] 2025-07-23 21:15:36,531 | INFO     | sum of deviations: 40706107395.99998
[2025-07-24 00:31:46] 2025-07-23 21:15:36,531 | INFO     | mean x: 1753293297.5
[2025-07-24 00:31:46] 2025-07-23 21:15:36,531 | INFO     | mean y: 2569381.7120418847
[2025-07-24 00:31:46] 2025-07-23 21:15:36,531 | INFO     | -- intersect: -4126466054.863523
[2025-07-24 00:31:46] 2025-07-23 21:15:36,532 | INFO     | intersect: -4126466054.863523
[2025-07-24 00:31:46] 2025-07-23 21:15:36,532 | INFO     | chi2: 1.8218516878881927
[2025-07-24 00:31:46] 2025-07-23 21:15:36,532 | INFO     | current chi2=1.8218516878881927 (change=47.70707006961407 %)
[2025-07-24 00:31:46] 2025-07-23 21:15:36,533 | INFO     | sum of square deviations: 16614964548.0
[2025-07-24 00:31:46] 2025-07-23 21:15:36,537 | INFO     | sum of deviations: 39948360027.99998
[2025-07-24 00:31:46] 2025-07-23 21:15:36,538 | INFO     | mean x: 1753293145.0
[2025-07-24 00:31:46] 2025-07-23 21:15:36,538 | INFO     | mean y: 2569209.196286472
[2025-07-24 00:31:46] 2025-07-23 21:15:36,538 | INFO     | -- intersect: -4212979105.0199757
[2025-07-24 00:31:46] 2025-07-23 21:15:36,538 | INFO     | intersect: -4212979105.0199757
[2025-07-24 00:31:46] 2025-07-23 21:15:36,539 | INFO     | chi2: 1.8222188554844387
[2025-07-24 00:31:46] 2025-07-23 21:15:36,544 | INFO     | current chi2=1.8222188554844387 (change=-0.020153539318647967 %)
[2025-07-24 00:31:46] 2025-07-23 21:15:36,545 | INFO     | right removable region: 376
[2025-07-24 00:31:46] 2025-07-23 21:15:36,545 | INFO     | sum of square deviations: 17284846875.5
[2025-07-24 00:31:46] 2025-07-23 21:15:36,550 | INFO     | sum of deviations: -83747575392.00002
[2025-07-24 00:31:46] 2025-07-23 21:15:36,550 | INFO     | mean x: 1753293602.5
[2025-07-24 00:31:46] 2025-07-23 21:15:36,550 | INFO     | mean y: 2572792.0209424086
[2025-07-24 00:31:46] 2025-07-23 21:15:36,550 | INFO     | -- intersect: 8497533101.319754
[2025-07-24 00:31:46] 2025-07-23 21:15:36,550 | INFO     | intersect: 8497533101.319754
[2025-07-24 00:31:46] 2025-07-23 21:15:36,551 | INFO     | chi2: 1.875643670595876
[2025-07-24 00:31:46] 2025-07-23 21:15:36,551 | INFO     | current chi2=1.875643670595876 (change=46.163069314091516 %)
[2025-07-24 00:31:46] 2025-07-23 21:15:36,552 | INFO     | sum of square deviations: 16614964548.0
[2025-07-24 00:31:46] 2025-07-23 21:15:36,556 | INFO     | sum of deviations: -85384252911.0
[2025-07-24 00:31:46] 2025-07-23 21:15:36,557 | INFO     | mean x: 1753293755.0
[2025-07-24 00:31:46] 2025-07-23 21:15:36,557 | INFO     | mean y: 2573151.7612732095
[2025-07-24 00:31:46] 2025-07-23 21:15:36,557 | INFO     | -- intersect: 9012744492.886234
[2025-07-24 00:31:46] 2025-07-23 21:15:36,557 | INFO     | intersect: 9012744492.886234
[2025-07-24 00:31:46] 2025-07-23 21:15:36,558 | INFO     | chi2: 1.8567062453227265
[2025-07-24 00:31:46] 2025-07-23 21:15:36,558 | INFO     | current chi2=1.8567062453227265 (change=1.0096494110276866 %)
[2025-07-24 00:31:46] 2025-07-23 21:15:36,558 | INFO     | left removable region: 20
[2025-07-24 00:31:46] 2025-07-23 21:15:36,559 | INFO     | sum of square deviations: 13990234405.0
[2025-07-24 00:31:46] 2025-07-23 21:15:36,563 | INFO     | sum of deviations: -8437997751.999995
[2025-07-24 00:31:46] 2025-07-23 21:15:36,563 | INFO     | mean x: 1753293724.5
[2025-07-24 00:31:46] 2025-07-23 21:15:36,563 | INFO     | mean y: 2580046.820224719
[2025-07-24 00:31:46] 2025-07-23 21:15:36,563 | INFO     | -- intersect: 1060052572.1296889
[2025-07-24 00:31:46] 2025-07-23 21:15:36,563 | INFO     | intersect: 1060052572.1296889
[2025-07-24 00:31:46] 2025-07-23 21:15:36,564 | INFO     | chi2: 0.11270483267197574
[2025-07-24 00:31:46] 2025-07-23 21:15:36,564 | INFO     | -- intersect: 1060052572.1296889
[2025-07-24 00:31:46] 2025-07-23 21:15:36,564 | INFO     | current memory leak: -0.60 B/s (using 356 data points, chi2=0.11)
[2025-07-24 00:31:46] 2025-07-23 21:15:36,565 | INFO     | could have reported an average CPU frequency of 1999 MHz (16 samples)
[2025-07-24 00:31:46] 2025-07-23 21:15:36,565 | INFO     | ..............................
[2025-07-24 00:31:46] 2025-07-23 21:15:36,565 | INFO     | . Timing measurements:
[2025-07-24 00:31:46] 2025-07-23 21:15:36,565 | INFO     | . get job = 0 s
[2025-07-24 00:31:46] 2025-07-23 21:15:36,566 | INFO     | . initial setup = 2 s
[2025-07-24 00:31:46] 2025-07-23 21:15:36,566 | INFO     | . payload setup = 14 s
[2025-07-24 00:31:46] 2025-07-23 21:15:36,566 | INFO     | . stage-in = 0 s
[2025-07-24 00:31:46] 2025-07-23 21:15:36,566 | INFO     | . payload execution = 23590 s
[2025-07-24 00:31:46] 2025-07-23 21:15:36,566 | INFO     | . stage-out = 3 s
[2025-07-24 00:31:46] 2025-07-23 21:15:36,566 | INFO     | . log creation = 1 s
[2025-07-24 00:31:46] 2025-07-23 21:15:36,566 | INFO     | ..............................
[2025-07-24 00:31:46] 2025-07-23 21:15:36,758 | INFO     | 
[2025-07-24 00:31:46] 2025-07-23 21:15:36,758 | INFO     | job summary report
[2025-07-24 00:31:46] 2025-07-23 21:15:36,759 | INFO     | --------------------------------------------------
[2025-07-24 00:31:46] 2025-07-23 21:15:36,759 | INFO     | PanDA job id: 6741854699
[2025-07-24 00:31:46] 2025-07-23 21:15:36,759 | INFO     | task id: 45697490
[2025-07-24 00:31:46] 2025-07-23 21:15:36,759 | INFO     | errors: (none)
[2025-07-24 00:31:46] 2025-07-23 21:15:36,759 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-24 00:31:46] 2025-07-23 21:15:36,759 | INFO     | pilot state: finished 
[2025-07-24 00:31:46] 2025-07-23 21:15:36,759 | INFO     | transexitcode: 0
[2025-07-24 00:31:46] 2025-07-23 21:15:36,759 | INFO     | exeerrorcode: 0
[2025-07-24 00:31:46] 2025-07-23 21:15:36,759 | INFO     | exeerrordiag: 
[2025-07-24 00:31:46] 2025-07-23 21:15:36,759 | INFO     | exitcode: 0
[2025-07-24 00:31:46] 2025-07-23 21:15:36,759 | INFO     | exitmsg: OK
[2025-07-24 00:31:46] 2025-07-23 21:15:36,760 | INFO     | cpuconsumptiontime: 90319 s
[2025-07-24 00:31:46] 2025-07-23 21:15:36,760 | INFO     | nevents: 400
[2025-07-24 00:31:46] 2025-07-23 21:15:36,760 | INFO     | neventsw: 0
[2025-07-24 00:31:46] 2025-07-23 21:15:36,760 | INFO     | pid: 12594
[2025-07-24 00:31:46] 2025-07-23 21:15:36,760 | INFO     | pgrp: 12594
[2025-07-24 00:31:46] 2025-07-23 21:15:36,760 | INFO     | corecount: 8
[2025-07-24 00:31:46] 2025-07-23 21:15:36,760 | INFO     | event service: False
[2025-07-24 00:31:46] 2025-07-23 21:15:36,760 | INFO     | sizes: {0: 2397279, 1: 2397478, 9: 2397740, 12: 2397768, 23608: 2431737, 23612: 2440735, 23615: 2440919, 23701: 2441113}
[2025-07-24 00:31:46] 2025-07-23 21:15:36,760 | INFO     | --------------------------------------------------
[2025-07-24 00:31:46] 2025-07-23 21:15:36,760 | INFO     | 
[2025-07-24 00:31:46] 2025-07-23 21:15:36,761 | INFO     | executing command: ls -lF /var/lib/boinc/slots/7
[2025-07-24 00:31:46] 2025-07-23 21:15:37,078 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-24 00:31:46] 2025-07-23 21:15:37,079 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-24 00:31:46] 2025-07-23 21:15:37,079 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-24 00:31:46] 2025-07-23 21:15:37,079 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-24 00:31:46] 2025-07-23 21:15:37,079 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-24 00:31:46] 2025-07-23 21:15:37,079 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-24 00:31:46] 2025-07-23 21:15:37,079 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-24 00:31:46] 2025-07-23 21:15:37,079 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-24 00:31:46] 2025-07-23 21:15:37,079 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-24 00:31:46] 2025-07-23 21:15:37,079 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-24 00:31:46] 2025-07-23 21:15:37,079 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-24 00:31:46] 2025-07-23 21:15:37,079 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-24 00:31:46] 2025-07-23 21:15:37,080 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-24 00:31:46] 2025-07-23 21:15:37,080 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-24 00:31:46] 2025-07-23 21:15:37,080 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-24 00:31:46] 2025-07-23 21:15:37,080 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-24 00:31:46] 2025-07-23 21:15:37,080 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-24 00:31:46] 2025-07-23 21:15:37,080 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-24 00:31:46] 2025-07-23 21:15:37,080 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-24 00:31:46] 2025-07-23 21:15:37,080 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-24 00:31:46] 2025-07-23 21:15:37,081 | INFO     | job 6741854699 has completed (purged errors)
[2025-07-24 00:31:46] 2025-07-23 21:15:37,081 | INFO     | overall cleanup function is called
[2025-07-24 00:31:46] 2025-07-23 21:15:38,089 | INFO     | --- collectZombieJob: --- 10, [12594]
[2025-07-24 00:31:46] 2025-07-23 21:15:38,089 | INFO     | zombie collector waiting for pid 12594
[2025-07-24 00:31:46] 2025-07-23 21:15:38,090 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-24 00:31:46] 2025-07-23 21:15:38,090 | INFO     | collected zombie processes
[2025-07-24 00:31:46] 2025-07-23 21:15:38,090 | INFO     | will attempt to kill all subprocesses of pid=12594
[2025-07-24 00:31:46] 2025-07-23 21:15:38,192 | INFO     | process IDs to be killed: [12594] (in reverse order)
[2025-07-24 00:31:46] 2025-07-23 21:15:38,970 | WARNING  | found no corresponding commands to process id(s)
[2025-07-24 00:31:46] 2025-07-23 21:15:38,971 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-24 00:31:46] 2025-07-23 21:15:38,974 | INFO     | did not find any defunct processes belonging to 12594
[2025-07-24 00:31:46] 2025-07-23 21:15:38,977 | INFO     | did not find any defunct processes belonging to 12594
[2025-07-24 00:31:46] 2025-07-23 21:15:38,977 | INFO     | ready for new job
[2025-07-24 00:31:46] 2025-07-23 21:15:38,977 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-24 00:31:46] 2025-07-23 21:15:38,979 | INFO     | ***************************************
[2025-07-24 00:31:46] 2025-07-23 21:15:38,979 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-24 00:31:46] 2025-07-23 21:15:38,979 | INFO     | ***************************************
[2025-07-24 00:31:46] 2025-07-23 21:15:38,979 | INFO     | 
[2025-07-24 00:31:46] 2025-07-23 21:15:38,980 | INFO     | pilot is running in a VM
[2025-07-24 00:31:46] 2025-07-23 21:15:38,980 | INFO     | architecture information:
[2025-07-24 00:31:46] 2025-07-23 21:15:38,995 | INFO     | executing command: cat /etc/os-release
[2025-07-24 00:31:46] 2025-07-23 21:15:39,177 | INFO     | cat /etc/os-release:
[2025-07-24 00:31:46] NAME="CentOS Linux"
[2025-07-24 00:31:46] VERSION="7 (Core)"
[2025-07-24 00:31:46] ID="centos"
[2025-07-24 00:31:46] ID_LIKE="rhel fedora"
[2025-07-24 00:31:46] VERSION_ID="7"
[2025-07-24 00:31:46] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-24 00:31:46] ANSI_COLOR="0;31"
[2025-07-24 00:31:46] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-24 00:31:46] HOME_URL="https://www.centos.org/"
[2025-07-24 00:31:46] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-24 00:31:46] 
[2025-07-24 00:31:46] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-24 00:31:46] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-24 00:31:46] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-24 00:31:46] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-24 00:31:46] 
[2025-07-24 00:31:46] 2025-07-23 21:15:39,177 | INFO     | ***************************************
[2025-07-24 00:31:46] 2025-07-23 21:15:39,681 | INFO     | executing command: df -mP /var/lib/boinc/slots/7
[2025-07-24 00:31:46] 2025-07-23 21:15:39,943 | INFO     | sufficient remaining disk space (496445161472 B)
[2025-07-24 00:31:46] 2025-07-23 21:15:39,943 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-24 00:31:46] 2025-07-23 21:15:39,943 | INFO     | current server update state: UPDATING_FINAL
[2025-07-24 00:31:46] 2025-07-23 21:15:39,943 | INFO     | update_server=False
[2025-07-24 00:31:46] 2025-07-23 21:15:39,944 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-24 00:31:46] 2025-07-23 21:15:39,944 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-24 00:31:46] 2025-07-23 21:15:39,945 | INFO     | aborting loop
[2025-07-24 00:31:46] 2025-07-23 21:15:39,959 | INFO     | all data control threads have been joined
[2025-07-24 00:31:46] 2025-07-23 21:15:40,172 | INFO     | all job control threads have been joined
[2025-07-24 00:31:46] 2025-07-23 21:15:40,920 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-24 00:31:46] 2025-07-23 21:15:40,949 | INFO     | [job] retrieve thread has finished
[2025-07-24 00:31:46] 2025-07-23 21:15:40,950 | INFO     | [job] job monitor thread has finished
[2025-07-24 00:31:46] 2025-07-23 21:15:40,964 | INFO     | [data] control thread has finished
[2025-07-24 00:31:46] 2025-07-23 21:15:40,991 | INFO     | [data] copytool_in thread has finished
[2025-07-24 00:31:46] 2025-07-23 21:15:41,142 | INFO     | [payload] validate_pre thread has finished
[2025-07-24 00:31:46] 2025-07-23 21:15:41,177 | INFO     | [payload] execute_payloads thread has finished
[2025-07-24 00:31:46] 2025-07-23 21:15:41,178 | INFO     | [job] control thread has finished
[2025-07-24 00:31:46] 2025-07-23 21:15:41,284 | INFO     | all payload control threads have been joined
[2025-07-24 00:31:46] 2025-07-23 21:15:41,458 | INFO     | [job] validate thread has finished
[2025-07-24 00:31:46] 2025-07-23 21:15:41,499 | INFO     | [payload] validate_post thread has finished
[2025-07-24 00:31:46] 2025-07-23 21:15:41,701 | INFO     | [job] create_data_payload thread has finished
[2025-07-24 00:31:46] 2025-07-23 21:15:41,726 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-24 00:31:46] 2025-07-23 21:15:41,925 | INFO     | [payload] failed_post thread has finished
[2025-07-24 00:31:46] 2025-07-23 21:15:42,290 | INFO     | [payload] control thread has finished
[2025-07-24 00:31:46] 2025-07-23 21:15:42,673 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-24 00:31:46] 2025-07-23 21:15:42,732 | INFO     | [job] queue monitor thread has finished
[2025-07-24 00:31:46] 2025-07-23 21:15:42,927 | INFO     | [data] copytool_out thread has finished
[2025-07-24 00:31:46] 2025-07-23 21:15:46,682 | INFO     | [data] queue_monitor thread has finished
[2025-07-24 00:31:46] 2025-07-23 21:15:50,598 | INFO     | job.realtimelogging is not enabled
[2025-07-24 00:31:46] 2025-07-23 21:15:51,604 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-24 00:31:46] 2025-07-23 21:15:53,201 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140125198571328)>', '<ExcThread(monitor, started 140124767639296)>']
[2025-07-24 00:31:46] 2025-07-23 21:15:58,227 | INFO     | all workflow threads have been joined
[2025-07-24 00:31:46] 2025-07-23 21:15:58,227 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-24 00:31:46] 2025-07-23 21:15:58,228 | INFO     | traces error code: 0
[2025-07-24 00:31:46] 2025-07-23 21:15:58,228 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-24 00:31:46] 2025-07-23 21:16:09,929 | INFO     | PID=5980 has CPU usage=1.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2025-07-24 00:31:46] 2025-07-23 21:16:09,930 | INFO     | .. there are 9 such processes running
[2025-07-24 00:31:46] 2025-07-23 21:16:09,931 | INFO     | found 0 job(s) in 20 queues
[2025-07-24 00:31:46] 2025-07-23 21:16:09,931 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-24 00:31:46] 2025-07-23 21:16:09,931 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-24 00:31:46] 2025-07-23 21:16:09,931 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-24 00:31:46] 2025-07-23 21:16:09,931 | INFO     | [monitor] control thread has ended
[2025-07-24 00:31:46] 2025-07-23 21:16:10,238 [wrapper] ==== pilot stdout END ====
[2025-07-24 00:31:46] 2025-07-23 21:16:10,326 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-24 00:31:46] 2025-07-23 21:16:10,434 [wrapper] pilotpid: 5980
[2025-07-24 00:31:46] 2025-07-23 21:16:10,498 [wrapper] Pilot exit status: 0
[2025-07-24 00:31:46] 2025-07-23 21:16:10,952 [wrapper] pandaids: 6741854699
[2025-07-24 00:31:46] 2025-07-23 21:16:11,882 [wrapper] cleanup supervisor_pilot 24739 5981
[2025-07-24 00:31:46] 2025-07-23 21:16:11,946 [wrapper] Test setup, not cleaning
[2025-07-24 00:31:46] 2025-07-23 21:16:12,028 [wrapper] apfmon messages muted
[2025-07-24 00:31:46] 2025-07-23 21:16:12,113 [wrapper] ==== wrapper stdout END ====
[2025-07-24 00:31:46] 2025-07-23 21:16:12,168 [wrapper] ==== wrapper stderr END ====
[2025-07-24 00:31:46]  *** Error codes and diagnostics ***
[2025-07-24 00:31:46]     "exeErrorCode": 0,
[2025-07-24 00:31:46]     "exeErrorDiag": "",
[2025-07-24 00:31:46]     "pilotErrorCode": 0,
[2025-07-24 00:31:46]     "pilotErrorDiag": "",
[2025-07-24 00:31:46]  *** Listing of results directory ***
[2025-07-24 00:31:46] total 649400
[2025-07-24 00:31:46] -rw-r--r--. 1 boinc boinc    530466 Jul 22 23:11 pilot3.tar.gz
[2025-07-24 00:31:46] -rw-r--r--. 1 boinc boinc      5112 Jul 23 00:03 queuedata.json
[2025-07-24 00:31:46] -rwx------. 1 boinc boinc     36292 Jul 23 00:05 runpilot2-wrapper.sh
[2025-07-24 00:31:46] -rw-r--r--. 1 boinc boinc       100 Jul 23 16:37 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-24 00:31:46] -rwxr-xr-x. 1 boinc boinc      7986 Jul 23 16:37 run_atlas
[2025-07-24 00:31:46] -rw-r--r--. 1 boinc boinc       105 Jul 23 16:37 job.xml
[2025-07-24 00:31:46] -rw-r--r--. 1 boinc boinc      6391 Jul 23 16:37 init_data.xml
[2025-07-24 00:31:46] -rw-r--r--. 2 boinc boinc 345923211 Jul 23 16:37 EVNT.45697488._000107.pool.root.1
[2025-07-24 00:31:46] -rw-r--r--. 2 boinc boinc     15095 Jul 23 16:37 start_atlas.sh
[2025-07-24 00:31:46] drwxrwx--x. 2 boinc boinc        68 Jul 23 16:37 shared
[2025-07-24 00:31:46] -rw-r--r--. 2 boinc boinc    542900 Jul 23 16:37 input.tar.gz
[2025-07-24 00:31:46] -rw-r--r--. 1 boinc boinc         0 Jul 23 16:37 boinc_lockfile
[2025-07-24 00:31:46] -rw-r--r--. 1 boinc boinc      2587 Jul 23 16:39 pandaJob.out
[2025-07-24 00:31:46] -rw-------. 1 boinc boinc    978487 Jul 23 16:40 agis_schedconf.cvmfs.json
[2025-07-24 00:31:46] drwx------. 4 boinc boinc      4096 Jul 23 16:40 pilot3
[2025-07-24 00:31:46] -rw-------. 1 boinc boinc 310250409 Jul 23 23:12 HITS.45697490._002182.pool.root.1
[2025-07-24 00:31:46] -rw-r--r--. 1 boinc boinc       532 Jul 23 23:12 boinc_task_state.xml
[2025-07-24 00:31:46] -rw-------. 1 boinc boinc      1020 Jul 23 23:14 memory_monitor_summary.json
[2025-07-24 00:31:46] -rw-------. 1 boinc boinc   1593041 Jul 23 23:14 agis_ddmendpoints.agis.ALL.json
[2025-07-24 00:31:46] -rw-------. 1 boinc boinc    463720 Jul 23 23:14 log.45697490._002182.job.log.tgz.1
[2025-07-24 00:31:46] -rw-------. 1 boinc boinc      7776 Jul 23 23:15 heartbeat.json
[2025-07-24 00:31:46] -rw-------. 1 boinc boinc        95 Jul 23 23:16 pilot_heartbeat.json
[2025-07-24 00:31:46] -rw-------. 1 boinc boinc       819 Jul 23 23:16 pilotlog.txt
[2025-07-24 00:31:46] -rw-------. 1 boinc boinc   2013669 Jul 23 23:16 log.45697490._002182.job.log.1
[2025-07-24 00:31:46] -rw-------. 1 boinc boinc       357 Jul 23 23:16 output.list
[2025-07-24 00:31:46] -rw-r--r--. 1 boinc boinc       620 Jul 23 23:16 runtime_log
[2025-07-24 00:31:46] -rw-------. 1 boinc boinc   2498560 Jul 23 23:16 result.tar.gz
[2025-07-24 00:31:46] -rw-r--r--. 1 boinc boinc      8660 Jul 23 23:16 runtime_log.err
[2025-07-24 00:31:46] -rw-------. 1 boinc boinc       658 Jul 23 23:16 RpHMDm3Hay7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmRJKLDmDf4apm.diag
[2025-07-24 00:31:46] -rw-r--r--. 1 boinc boinc      8192 Jul 24 00:31 boinc_mmap_file
[2025-07-24 00:31:46] -rw-r--r--. 1 boinc boinc        28 Jul 24 00:31 wrapper_checkpoint.txt
[2025-07-24 00:31:46] -rw-r--r--. 1 boinc boinc     20577 Jul 24 00:31 stderr.txt
[2025-07-24 00:31:46] HITS file was successfully produced:
[2025-07-24 00:31:46] -rw-------. 1 boinc boinc 310250409 Jul 23 23:12 shared/HITS.pool.root.1
[2025-07-24 00:31:47]  *** Contents of shared directory: ***
[2025-07-24 00:31:47] total 643784
[2025-07-24 00:31:47] -rw-r--r--. 2 boinc boinc 345923211 Jul 23 16:37 ATLAS.root_0
[2025-07-24 00:31:47] -rw-r--r--. 2 boinc boinc     15095 Jul 23 16:37 start_atlas.sh
[2025-07-24 00:31:47] -rw-r--r--. 2 boinc boinc    542900 Jul 23 16:37 input.tar.gz
[2025-07-24 00:31:47] -rw-------. 1 boinc boinc 310250409 Jul 23 23:12 HITS.pool.root.1
[2025-07-24 00:31:47] -rw-------. 1 boinc boinc   2498560 Jul 23 23:16 result.tar.gz
00:31:48 (1891): run_atlas exited; CPU time 90630.267111
00:31:48 (1891): called boinc_finish(0)

</stderr_txt>
]]>

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