Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
01:25:43 (28542): wrapper (7.7.26015): starting
01:25:43 (28542): wrapper: running run_atlas (--nthreads 8)
[2025-07-23 01:25:43] Arguments: --nthreads 8
[2025-07-23 01:25:43] Threads: 8
[2025-07-23 01:25:43] Checking for CVMFS
[2025-07-23 01:25:43] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-23 01:25:43] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-23 01:25:43] Running cvmfs_config stat atlas.cern.ch
[2025-07-23 01:25:44] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-23 01:25:44] 2.11.2.0 5069 39552 394544 148647 1 139 12998809 18432001 14819 130560 0 99275453 99.395 144348251 67751 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-07-23 01:25:44] CVMFS is ok
[2025-07-23 01:25:44] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-07-23 01:25:44] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-07-23 01:25:44] Further information can be found at the LHC@home message board.
[2025-07-23 01:25:44] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-23 01:25:44] Checking for apptainer binary...
[2025-07-23 01:25:44] Using apptainer found in PATH at /usr/bin/apptainer
[2025-07-23 01:25:44] Running /usr/bin/apptainer --version
[2025-07-23 01:25:44] apptainer version 1.3.2-1.el7
[2025-07-23 01:25:44] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-23 01:25:45] c-210-41.aglt2.org
[2025-07-23 01:25:45] apptainer works
[2025-07-23 01:25:45] Set ATHENA_PROC_NUMBER=8
[2025-07-23 01:25:45] Set ATHENA_CORE_NUMBER=8
[2025-07-23 01:25:45] Starting ATLAS job with PandaID=6742556954
[2025-07-23 01:25:45] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/5 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-23 04:35:50]  *** The last 200 lines of the pilot log: ***
[2025-07-23 04:35:51] 2025-07-23 08:33:13,654 | INFO     | -- intersect: -59519091188.66014
[2025-07-23 04:35:51] 2025-07-23 08:33:13,654 | INFO     | intersect: -59519091188.66014
[2025-07-23 04:35:51] 2025-07-23 08:33:13,654 | INFO     | chi2: 0.07111800875579988
[2025-07-23 04:35:51] 2025-07-23 08:33:13,654 | INFO     | -- intersect: -59519091188.66014
[2025-07-23 04:35:51] 2025-07-23 08:33:13,654 | INFO     | current memory leak: 33.95 B/s (using 100 data points, chi2=0.07)
[2025-07-23 04:35:51] 2025-07-23 08:33:13,686 | INFO     | could have reported an average CPU frequency of 2994 MHz (8 samples)
[2025-07-23 04:35:51] 2025-07-23 08:33:13,687 | INFO     | ..............................
[2025-07-23 04:35:51] 2025-07-23 08:33:13,687 | INFO     | . Timing measurements:
[2025-07-23 04:35:51] 2025-07-23 08:33:13,687 | INFO     | . get job = 0 s
[2025-07-23 04:35:51] 2025-07-23 08:33:13,687 | INFO     | . initial setup = 3 s
[2025-07-23 04:35:51] 2025-07-23 08:33:13,687 | INFO     | . payload setup = 101 s
[2025-07-23 04:35:51] 2025-07-23 08:33:13,687 | INFO     | . stage-in = 0 s
[2025-07-23 04:35:51] 2025-07-23 08:33:13,687 | INFO     | . payload execution = 9210 s
[2025-07-23 04:35:51] 2025-07-23 08:33:13,687 | INFO     | . stage-out = 4 s
[2025-07-23 04:35:51] 2025-07-23 08:33:13,687 | INFO     | . log creation = 3 s
[2025-07-23 04:35:51] 2025-07-23 08:33:13,687 | INFO     | ..............................
[2025-07-23 04:35:51] 2025-07-23 08:33:13,687 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-07-23 04:35:51] 2025-07-23 08:33:13,688 | INFO     | executing command: tail -n 20 /tmp/boinchome/slots/5/PanDA_Pilot-6742556954/pilotlog.txt
[2025-07-23 04:35:51] 2025-07-23 08:33:13,847 | WARNING  | detected the following tail of warning/fatal messages in the pilot log:
[2025-07-23 04:35:51] - Log from pilotlog.txt -
[2025-07-23 04:35:51] 2025-07-23 08:33:13,653 | INFO     | mean x: 1753254074.38
[2025-07-23 04:35:51] 2025-07-23 08:33:13,654 | INFO     | mean y: 2502973.74
[2025-07-23 04:35:51] 2025-07-23 08:33:13,654 | INFO     | -- intersect: -59519091188.66014
[2025-07-23 04:35:51] 2025-07-23 08:33:13,654 | INFO     | intersect: -59519091188.66014
[2025-07-23 04:35:51] 2025-07-23 08:33:13,654 | INFO     | chi2: 0.07111800875579988
[2025-07-23 04:35:51] 2025-07-23 08:33:13,654 | INFO     | -- intersect: -59519091188.66014
[2025-07-23 04:35:51] 2025-07-23 08:33:13,654 | INFO     | current memory leak: 33.95 B/s (using 100 data points, chi2=0.07)
[2025-07-23 04:35:51] 2025-07-23 08:33:13,686 | INFO     | could have reported an average CPU frequency of 2994 MHz (8 samples)
[2025-07-23 04:35:51] 2025-07-23 08:33:13,687 | INFO     | ..............................
[2025-07-23 04:35:51] 2025-07-23 08:33:13,687 | INFO     | . Timing measurements:
[2025-07-23 04:35:51] 2025-07-23 08:33:13,687 | INFO     | . get job = 0 s
[2025-07-23 04:35:51] 2025-07-23 08:33:13,687 | INFO     | . initial setup = 3 s
[2025-07-23 04:35:51] 2025-07-23 08:33:13,687 | INFO     | . payload setup = 101 s
[2025-07-23 04:35:51] 2025-07-23 08:33:13,687 | INFO     | . stage-in = 0 s
[2025-07-23 04:35:51] 2025-07-23 08:33:13,687 | INFO     | . payload execution = 9210 s
[2025-07-23 04:35:51] 2025-07-23 08:33:13,687 | INFO     | . stage-out = 4 s
[2025-07-23 04:35:51] 2025-07-23 08:33:13,687 | INFO     | . log creation = 3 s
[2025-07-23 04:35:51] 2025-07-23 08:33:13,687 | INFO     | ..............................
[2025-07-23 04:35:51] 2025-07-23 08:33:13,687 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-07-23 04:35:51] 2025-07-23 08:33:13,688 | INFO     | executing command: tail -n 20 /tmp/boinchome/slots/5/PanDA_Pilot-6742556954/pilotlog.txt
[2025-07-23 04:35:51] 2025-07-23 08:33:13,847 | WARNING  | 
[2025-07-23 04:35:51] [begin log extracts]
[2025-07-23 04:35:51] - Log from pilotlog.txt -
[2025-07-23 04:35:51] 2025-07-23 08:33:13,653 | INFO     | mean x: 1753254074.38
[2025-07-23 04:35:51] 2025-07-23 08:33:13,654 | INFO     | mean y: 2502973.74
[2025-07-23 04:35:51] 2025-07-23 08:33:13,654 | INFO     | -- intersect: -59519091188.66014
[2025-07-23 04:35:51] 2025-07-23 08:33:13,654 | INFO     | intersect: -59519091188.66014
[2025-07-23 04:35:51] 2025-07-23 08:33:13,654 | INFO     | chi2: 0.07111800875579988
[2025-07-23 04:35:51] 2025-07-23 08:33:13,654 | INFO     | -- intersect: -59519091188.66014
[2025-07-23 04:35:51] 2025-07-23 08:33:13,654 | INFO     | current memory leak: 33.95 B/s (using 100 data points, chi2=0.07)
[2025-07-23 04:35:51] 2025-07-23 08:33:13,686 | INFO     | could have reported an average CPU frequency of 2994 MHz (8 samples)
[2025-07-23 04:35:51] 2025-07-23 08:33:13,687 | INFO     | ..............................
[2025-07-23 04:35:51] 2025-07-23 08:33:13,687 | INFO     | . Timing measurements:
[2025-07-23 04:35:51] 2025-07-23 08:33:13,687 | INFO     | . get job = 0 s
[2025-07-23 04:35:51] 2025-07-23 08:33:13,687 | INFO     | . initial setup = 3 s
[2025-07-23 04:35:51] 2025-07-23 08:33:13,687 | INFO     | . payload setup = 101 s
[2025-07-23 04:35:51] 2025-07-23 08:33:13,687 | INFO     | . stage-in = 0 s
[2025-07-23 04:35:51] 2025-07-23 08:33:13,687 | INFO     | . payload execution = 9210 s
[2025-07-23 04:35:51] 2025-07-23 08:33:13,687 | INFO     | . stage-out = 4 s
[2025-07-23 04:35:51] 2025-07-23 08:33:13,687 | INFO     | . log creation = 3 s
[2025-07-23 04:35:51] 2025-07-23 08:33:13,687 | INFO     | ..............................
[2025-07-23 04:35:51] 2025-07-23 08:33:13,687 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-07-23 04:35:51] 2025-07-23 08:33:13,688 | INFO     | executing command: tail -n 20 /tmp/boinchome/slots/5/PanDA_Pilot-6742556954/pilotlog.txt
[2025-07-23 04:35:51] [end log extracts]
[2025-07-23 04:35:51] 2025-07-23 08:33:13,847 | WARNING  | pilotErrorCodes = [1305] (will report primary/first error code)
[2025-07-23 04:35:51] 2025-07-23 08:33:13,848 | WARNING  | pilotErrorDiags = ['Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: EVNTtoHITS got a 
[2025-07-23 04:35:51] 2025-07-23 08:33:14,045 | INFO     | 
[2025-07-23 04:35:51] 2025-07-23 08:33:14,046 | INFO     | job summary report
[2025-07-23 04:35:51] 2025-07-23 08:33:14,046 | INFO     | --------------------------------------------------
[2025-07-23 04:35:51] 2025-07-23 08:33:14,046 | INFO     | PanDA job id: 6742556954
[2025-07-23 04:35:51] 2025-07-23 08:33:14,046 | INFO     | task id: 45697541
[2025-07-23 04:35:51] 2025-07-23 08:33:14,046 | INFO     | error 1/1: 1305: Failed to execute payload:PyJobTransforms.transform.execute 2025-07-23 08:01:23,593 CRITICAL Transform executor raised TransformValidationExceptio
[2025-07-23 04:35:51] 2025-07-23 08:33:14,046 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-23 04:35:51] 2025-07-23 08:33:14,046 | INFO     | pilot state: failed 
[2025-07-23 04:35:51] 2025-07-23 08:33:14,046 | INFO     | transexitcode: 65
[2025-07-23 04:35:51] 2025-07-23 08:33:14,046 | INFO     | exeerrorcode: 65
[2025-07-23 04:35:51] 2025-07-23 08:33:14,046 | INFO     | exeerrordiag: EVNTtoHITS got a SIGKILL signal (exit code 137)
[2025-07-23 04:35:51] 2025-07-23 08:33:14,046 | INFO     | exitcode: 65
[2025-07-23 04:35:51] 2025-07-23 08:33:14,046 | INFO     | exitmsg: EVNTtoHITS got a SIGKILL signal (exit code 137)
[2025-07-23 04:35:51] 2025-07-23 08:33:14,046 | INFO     | cpuconsumptiontime: 7708 s
[2025-07-23 04:35:51] 2025-07-23 08:33:14,046 | INFO     | nevents: 0
[2025-07-23 04:35:51] 2025-07-23 08:33:14,047 | INFO     | neventsw: 0
[2025-07-23 04:35:51] 2025-07-23 08:33:14,047 | INFO     | pid: 2005
[2025-07-23 04:35:51] 2025-07-23 08:33:14,047 | INFO     | pgrp: 2005
[2025-07-23 04:35:51] 2025-07-23 08:33:14,047 | INFO     | corecount: 8
[2025-07-23 04:35:51] 2025-07-23 08:33:14,047 | INFO     | event service: False
[2025-07-23 04:35:51] 2025-07-23 08:33:14,047 | INFO     | sizes: {0: 2397337, 1: 2397536, 11: 2397536, 15: 2397826, 22: 2397854, 9314: 2425180, 9319: 2429475, 9323: 2429531, 11184: 2429725}
[2025-07-23 04:35:51] 2025-07-23 08:33:14,047 | INFO     | --------------------------------------------------
[2025-07-23 04:35:51] 2025-07-23 08:33:14,047 | INFO     | 
[2025-07-23 04:35:51] 2025-07-23 08:33:14,047 | INFO     | executing command: ls -lF /tmp/boinchome/slots/5
[2025-07-23 04:35:51] 2025-07-23 08:33:14,718 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-23 04:35:51] 2025-07-23 08:33:14,727 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-23 04:35:51] 2025-07-23 08:33:14,727 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-23 04:35:51] 2025-07-23 08:33:14,727 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-23 04:35:51] 2025-07-23 08:33:14,727 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-23 04:35:51] 2025-07-23 08:33:14,727 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-23 04:35:51] 2025-07-23 08:33:14,727 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-23 04:35:51] 2025-07-23 08:33:14,727 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-23 04:35:51] 2025-07-23 08:33:14,727 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-23 04:35:51] 2025-07-23 08:33:14,727 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-23 04:35:51] 2025-07-23 08:33:14,727 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-23 04:35:51] 2025-07-23 08:33:14,727 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-23 04:35:51] 2025-07-23 08:33:14,727 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-23 04:35:51] 2025-07-23 08:33:14,727 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-23 04:35:51] 2025-07-23 08:33:14,727 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-23 04:35:51] 2025-07-23 08:33:14,728 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-23 04:35:51] 2025-07-23 08:33:14,728 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-23 04:35:51] 2025-07-23 08:33:14,728 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-23 04:35:51] 2025-07-23 08:33:14,728 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-23 04:35:51] 2025-07-23 08:33:14,728 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-23 04:35:51] 2025-07-23 08:33:14,728 | INFO     | job 6742556954 has completed (purged errors)
[2025-07-23 04:35:51] 2025-07-23 08:33:14,728 | INFO     | overall cleanup function is called
[2025-07-23 04:35:51] 2025-07-23 08:33:16,296 | INFO     | --- collectZombieJob: --- 10, [2005]
[2025-07-23 04:35:51] 2025-07-23 08:33:16,500 | INFO     | zombie collector waiting for pid 2005
[2025-07-23 04:35:51] 2025-07-23 08:33:16,502 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-23 04:35:51] 2025-07-23 08:33:16,503 | INFO     | collected zombie processes
[2025-07-23 04:35:51] 2025-07-23 08:33:16,503 | INFO     | will attempt to kill all subprocesses of pid=2005
[2025-07-23 04:35:51] 2025-07-23 08:33:17,829 | INFO     | process IDs to be killed: [2005] (in reverse order)
[2025-07-23 04:35:51] 2025-07-23 08:33:20,282 | WARNING  | found no corresponding commands to process id(s)
[2025-07-23 04:35:51] 2025-07-23 08:33:20,309 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-23 04:35:51] 2025-07-23 08:33:20,509 | INFO     | did not find any defunct processes belonging to 2005
[2025-07-23 04:35:51] 2025-07-23 08:33:20,841 | INFO     | did not find any defunct processes belonging to 2005
[2025-07-23 04:35:51] 2025-07-23 08:33:20,841 | INFO     | ready for new job
[2025-07-23 04:35:51] 2025-07-23 08:33:20,869 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-23 04:35:51] 2025-07-23 08:33:20,891 | INFO     | ***************************************
[2025-07-23 04:35:51] 2025-07-23 08:33:20,891 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-23 04:35:51] 2025-07-23 08:33:20,891 | INFO     | ***************************************
[2025-07-23 04:35:51] 2025-07-23 08:33:20,891 | INFO     | 
[2025-07-23 04:35:51] 2025-07-23 08:33:21,161 | INFO     | architecture information:
[2025-07-23 04:35:51] 2025-07-23 08:33:21,174 | INFO     | executing command: cat /etc/os-release
[2025-07-23 04:35:51] 2025-07-23 08:33:21,857 | INFO     | cat /etc/os-release:
[2025-07-23 04:35:51] NAME="CentOS Linux"
[2025-07-23 04:35:51] VERSION="7 (Core)"
[2025-07-23 04:35:51] ID="centos"
[2025-07-23 04:35:51] ID_LIKE="rhel fedora"
[2025-07-23 04:35:51] VERSION_ID="7"
[2025-07-23 04:35:51] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-23 04:35:51] ANSI_COLOR="0;31"
[2025-07-23 04:35:51] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-23 04:35:51] HOME_URL="https://www.centos.org/"
[2025-07-23 04:35:51] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-23 04:35:51] 
[2025-07-23 04:35:51] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-23 04:35:51] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-23 04:35:51] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-23 04:35:51] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-23 04:35:51] 
[2025-07-23 04:35:51] 2025-07-23 08:33:21,857 | INFO     | ***************************************
[2025-07-23 04:35:51] 2025-07-23 08:33:22,361 | INFO     | executing command: df -mP /tmp/boinchome/slots/5
[2025-07-23 04:35:51] 2025-07-23 08:33:23,317 | INFO     | sufficient remaining disk space (73635201024 B)
[2025-07-23 04:35:51] 2025-07-23 08:33:23,328 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-23 04:35:51] 2025-07-23 08:33:23,329 | INFO     | current server update state: UPDATING_FINAL
[2025-07-23 04:35:51] 2025-07-23 08:33:23,329 | INFO     | update_server=False
[2025-07-23 04:35:51] 2025-07-23 08:33:23,329 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-23 04:35:51] 2025-07-23 08:33:23,334 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-23 04:35:51] 2025-07-23 08:33:23,335 | INFO     | aborting loop
[2025-07-23 04:35:51] 2025-07-23 08:33:23,367 | INFO     | all data control threads have been joined
[2025-07-23 04:35:51] 2025-07-23 08:33:23,418 | INFO     | all payload control threads have been joined
[2025-07-23 04:35:51] 2025-07-23 08:33:23,462 | INFO     | all job control threads have been joined
[2025-07-23 04:35:51] 2025-07-23 08:33:23,772 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-23 04:35:51] 2025-07-23 08:33:24,279 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-23 04:35:51] 2025-07-23 08:33:24,335 | INFO     | [job] retrieve thread has finished
[2025-07-23 04:35:51] 2025-07-23 08:33:24,345 | INFO     | [job] job monitor thread has finished
[2025-07-23 04:35:51] 2025-07-23 08:33:24,373 | INFO     | [data] control thread has finished
[2025-07-23 04:35:51] 2025-07-23 08:33:24,425 | INFO     | [payload] control thread has finished
[2025-07-23 04:35:51] 2025-07-23 08:33:24,469 | INFO     | [job] control thread has finished
[2025-07-23 04:35:51] 2025-07-23 08:33:24,778 | INFO     | [job] queue monitor thread has finished
[2025-07-23 04:35:51] 2025-07-23 08:33:24,817 | INFO     | [job] create_data_payload thread has finished
[2025-07-23 04:35:51] 2025-07-23 08:33:24,881 | INFO     | [payload] failed_post thread has finished
[2025-07-23 04:35:51] 2025-07-23 08:33:25,243 | INFO     | [job] validate thread has finished
[2025-07-23 04:35:51] 2025-07-23 08:33:25,253 | INFO     | [payload] execute_payloads thread has finished
[2025-07-23 04:35:51] 2025-07-23 08:33:25,253 | INFO     | [payload] validate_pre thread has finished
[2025-07-23 04:35:51] 2025-07-23 08:33:25,257 | INFO     | [data] copytool_in thread has finished
[2025-07-23 04:35:51] 2025-07-23 08:33:25,282 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-23 04:35:51] 2025-07-23 08:33:25,562 | INFO     | [payload] validate_post thread has finished
[2025-07-23 04:35:51] 2025-07-23 08:33:25,816 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-23 04:35:51] 2025-07-23 08:33:26,286 | INFO     | [data] copytool_out thread has finished
[2025-07-23 04:35:51] 2025-07-23 08:33:29,853 | INFO     | [data] queue_monitor thread has finished
[2025-07-23 04:35:51] 2025-07-23 08:33:31,655 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140660419917632)>', '<ExcThread(monitor, started 140659843397376)>']
[2025-07-23 04:35:51] 2025-07-23 08:33:36,688 | INFO     | all workflow threads have been joined
[2025-07-23 04:35:51] 2025-07-23 08:33:36,692 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-23 04:35:51] 2025-07-23 08:33:36,693 | INFO     | traces error code: 0
[2025-07-23 04:35:51] 2025-07-23 08:33:36,693 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-23 04:35:51] 2025-07-23 08:33:52,550 | INFO     | PID=39032 has CPU usage=2.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-07-23 04:35:51] 2025-07-23 08:33:52,562 | INFO     | .. there are 14 such processes running
[2025-07-23 04:35:51] 2025-07-23 08:33:52,651 | INFO     | found 0 job(s) in 20 queues
[2025-07-23 04:35:51] 2025-07-23 08:33:53,281 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-23 04:35:51] 2025-07-23 08:33:53,281 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-23 04:35:51] 2025-07-23 08:33:53,281 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-23 04:35:51] 2025-07-23 08:33:53,281 | INFO     | [monitor] control thread has ended
[2025-07-23 04:35:51] 2025-07-23 08:34:06,769 [wrapper] ==== pilot stdout END ====
[2025-07-23 04:35:51] 2025-07-23 08:34:06,816 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-23 04:35:51] 2025-07-23 08:34:06,841 [wrapper] pilotpid: 39032
[2025-07-23 04:35:51] 2025-07-23 08:34:06,852 [wrapper] Pilot exit status: 0
[2025-07-23 04:35:51] 2025-07-23 08:34:07,522 [wrapper] pandaids: 6742556954
[2025-07-23 04:35:51] 2025-07-23 08:34:16,913 [wrapper] cleanup supervisor_pilot 11851 39033
[2025-07-23 04:35:51] 2025-07-23 08:34:20,518 [wrapper] Test setup, not cleaning
[2025-07-23 04:35:51] 2025-07-23 08:34:25,838 [wrapper] apfmon messages muted
[2025-07-23 04:35:51] 2025-07-23 08:34:29,264 [wrapper] ==== wrapper stdout END ====
[2025-07-23 04:35:51] 2025-07-23 08:34:31,276 [wrapper] ==== wrapper stderr END ====
[2025-07-23 04:35:51]  *** Error codes and diagnostics ***
[2025-07-23 04:35:51]     "exeErrorCode": 65,
[2025-07-23 04:35:51]     "exeErrorDiag": "EVNTtoHITS got a SIGKILL signal (exit code 137)",
[2025-07-23 04:35:51]     "pilotErrorCode": 1305,
[2025-07-23 04:35:51]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: EVNTtoHITS got a SIGKILL signal (exit code 137)",
[2025-07-23 04:35:51]  *** Listing of results directory ***
[2025-07-23 04:35:51] total 345708
[2025-07-23 04:35:51] -rw-r--r-- 1 boincer umatlas    530466 Jul 22 17:11 pilot3.tar.gz
[2025-07-23 04:35:51] -rw-r--r-- 1 boincer umatlas      5112 Jul 22 17:16 queuedata.json
[2025-07-23 04:35:51] -rwx------ 1 boincer umatlas     36292 Jul 22 17:16 runpilot2-wrapper.sh
[2025-07-23 04:35:51] -rw-r--r-- 1 boincer umatlas       100 Jul 23 01:25 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-23 04:35:51] -rwxr-xr-x 1 boincer umatlas      7986 Jul 23 01:25 run_atlas
[2025-07-23 04:35:51] -rw-r--r-- 1 boincer umatlas       105 Jul 23 01:25 job.xml
[2025-07-23 04:35:51] -rw-r--r-- 2 boincer umatlas 348371550 Jul 23 01:25 EVNT.45697539._000146.pool.root.1
[2025-07-23 04:35:51] drwxrwx--x 2 boincer umatlas      4096 Jul 23 01:25 shared
[2025-07-23 04:35:51] -rw-r--r-- 2 boincer umatlas    542894 Jul 23 01:25 input.tar.gz
[2025-07-23 04:35:51] -rw-r--r-- 2 boincer umatlas     15095 Jul 23 01:25 start_atlas.sh
[2025-07-23 04:35:51] -rw-r--r-- 1 boincer umatlas         0 Jul 23 01:25 boinc_lockfile
[2025-07-23 04:35:51] -rw-r--r-- 1 boincer umatlas      2594 Jul 23 01:25 pandaJob.out
[2025-07-23 04:35:51] -rw------- 1 boincer umatlas    977736 Jul 23 01:26 agis_schedconf.cvmfs.json
[2025-07-23 04:35:51] -rw------- 1 boincer umatlas   1593031 Jul 23 01:26 agis_ddmendpoints.agis.ALL.json
[2025-07-23 04:35:51] drwx------ 4 boincer umatlas      4096 Jul 23 01:26 pilot3
[2025-07-23 04:35:51] -rw-r--r-- 1 boincer umatlas       529 Jul 23 04:01 boinc_task_state.xml
[2025-07-23 04:35:51] -rw------- 1 boincer umatlas         0 Jul 23 04:02 memory_monitor_summary.json
[2025-07-23 04:35:51] -rw------- 1 boincer umatlas    294978 Jul 23 04:02 log.45697541._004481.job.log.tgz.1
[2025-07-23 04:35:51] -rw-r--r-- 1 boincer umatlas      6250 Jul 23 04:31 init_data.xml
[2025-07-23 04:35:51] -rw------- 1 boincer umatlas      8718 Jul 23 04:33 heartbeat.json
[2025-07-23 04:35:51] -rw------- 1 boincer umatlas        97 Jul 23 04:33 pilot_heartbeat.json
[2025-07-23 04:35:51] -rw------- 1 boincer umatlas       821 Jul 23 04:33 pilotlog.txt
[2025-07-23 04:35:51] -rw------- 1 boincer umatlas    586179 Jul 23 04:34 log.45697541._004481.job.log.1
[2025-07-23 04:35:51] -rw------- 1 boincer umatlas       188 Jul 23 04:35 output.list
[2025-07-23 04:35:51] -rw-r--r-- 1 boincer umatlas       620 Jul 23 04:35 runtime_log
[2025-07-23 04:35:51] -rw------- 1 boincer umatlas    901120 Jul 23 04:35 result.tar.gz
[2025-07-23 04:35:51] -rw-r--r-- 1 boincer umatlas        26 Jul 23 04:35 wrapper_checkpoint.txt
[2025-07-23 04:35:51] -rw-r--r-- 1 boincer umatlas      8509 Jul 23 04:35 runtime_log.err
[2025-07-23 04:35:51] -rw------- 1 boincer umatlas       663 Jul 23 04:35 il6KDmvWZy7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmxDKLDm5YowDo.diag
[2025-07-23 04:35:51] -rw-r--r-- 1 boincer umatlas      8192 Jul 23 04:35 boinc_mmap_file
[2025-07-23 04:35:51] -rw-r--r-- 1 boincer umatlas     21431 Jul 23 04:35 stderr.txt
[2025-07-23 04:35:51] No HITS result produced
[2025-07-23 04:35:51]  *** Contents of shared directory: ***
[2025-07-23 04:35:51] total 341640
[2025-07-23 04:35:51] -rw-r--r-- 2 boincer umatlas 348371550 Jul 23 01:25 ATLAS.root_0
[2025-07-23 04:35:51] -rw-r--r-- 2 boincer umatlas    542894 Jul 23 01:25 input.tar.gz
[2025-07-23 04:35:51] -rw-r--r-- 2 boincer umatlas     15095 Jul 23 01:25 start_atlas.sh
[2025-07-23 04:35:51] -rw------- 1 boincer umatlas    901120 Jul 23 04:35 result.tar.gz
04:35:52 (28542): run_atlas exited; CPU time 7636.921351
04:35:52 (28542): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN