Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
21:52:15 (249986): wrapper (7.7.26015): starting
21:52:15 (249986): wrapper: running run_atlas (--nthreads 8)
[2025-07-22 21:52:15] Arguments: --nthreads 8
[2025-07-22 21:52:15] Threads: 8
[2025-07-22 21:52:15] Checking for CVMFS
[2025-07-22 21:52:15] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-22 21:52:15] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-22 21:52:15] Running cvmfs_config stat atlas.cern.ch
[2025-07-22 21:52:15] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-22 21:52:15] 2.11.3.0 1819798 103411 233540 148646 0 623 36113918 45568001 7251 130560 0 761573701 99.795 478295404 20348 http://cvmfs-s1bnl.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://206.12.9.162:3129 1
[2025-07-22 21:52:15] CVMFS is ok
[2025-07-22 21:52:15] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-07-22 21:52:15] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-07-22 21:52:15] Further information can be found at the LHC@home message board.
[2025-07-22 21:52:15] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-22 21:52:15] Checking for apptainer binary...
[2025-07-22 21:52:15] Using apptainer found in PATH at /usr/bin/apptainer
[2025-07-22 21:52:15] Running /usr/bin/apptainer --version
[2025-07-22 21:52:15] apptainer version 1.3.3-1.el9
[2025-07-22 21:52:15] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-22 21:52:15] WARNING: Environment variable TMPDIR already has value [/home/boinc/slots/0/.apptainertmp], will not forward new value [/home/boinc] from parent process environment wns0006.triumf.lcg
[2025-07-22 21:52:15] apptainer works
[2025-07-22 21:52:15] Set ATHENA_PROC_NUMBER=8
[2025-07-22 21:52:15] Set ATHENA_CORE_NUMBER=8
[2025-07-22 21:52:15] Starting ATLAS job with PandaID=6741871316
[2025-07-22 21:52:15] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-22 21:55:32]  *** The last 200 lines of the pilot log: ***
[2025-07-22 21:55:32] 2025-07-23 04:55:01,104 | WARNING  | found no stored workdir sizes
[2025-07-22 21:55:32] 2025-07-23 04:55:01,105 | INFO     | will not add max space = 0 B to job metrics
[2025-07-22 21:55:32] 2025-07-23 04:55:01,105 | WARNING  | wrong length of table data, x=[1753246365.0], y=[1020.0] (must be same and length>=4)
[2025-07-22 21:55:32] 2025-07-23 04:55:01,105 | INFO     | could have reported an average CPU frequency of 2095 MHz (4 samples)
[2025-07-22 21:55:32] 2025-07-23 04:55:01,106 | INFO     | ..............................
[2025-07-22 21:55:32] 2025-07-23 04:55:01,106 | INFO     | . Timing measurements:
[2025-07-22 21:55:32] 2025-07-23 04:55:01,106 | INFO     | . get job = 0 s
[2025-07-22 21:55:32] 2025-07-23 04:55:01,106 | INFO     | . initial setup = 2 s
[2025-07-22 21:55:32] 2025-07-23 04:55:01,106 | INFO     | . payload setup = 3 s
[2025-07-22 21:55:32] 2025-07-23 04:55:01,106 | INFO     | . stage-in = 0 s
[2025-07-22 21:55:32] 2025-07-23 04:55:01,106 | INFO     | . payload execution = 15 s
[2025-07-22 21:55:32] 2025-07-23 04:55:01,106 | INFO     | . stage-out = 0 s
[2025-07-22 21:55:32] 2025-07-23 04:55:01,106 | INFO     | . log creation = 0 s
[2025-07-22 21:55:32] 2025-07-23 04:55:01,106 | INFO     | ..............................
[2025-07-22 21:55:32] 2025-07-23 04:55:01,106 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-07-22 21:55:32] 2025-07-23 04:55:01,106 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6741871316/pilotlog.txt
[2025-07-22 21:55:32] 2025-07-23 04:55:01,115 | WARNING  | detected the following tail of warning/fatal messages in the pilot log:
[2025-07-22 21:55:32] - Log from pilotlog.txt -
[2025-07-22 21:55:32] 2025-07-23 04:55:01,104 | INFO     | extracted standard memory fields from prmon json
[2025-07-22 21:55:32] 2025-07-23 04:55:01,104 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-22 21:55:32] 2025-07-23 04:55:01,104 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-22 21:55:32] 2025-07-23 04:55:01,104 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-22 21:55:32] 2025-07-23 04:55:01,104 | WARNING  | found no stored workdir sizes
[2025-07-22 21:55:32] 2025-07-23 04:55:01,105 | INFO     | will not add max space = 0 B to job metrics
[2025-07-22 21:55:32] 2025-07-23 04:55:01,105 | WARNING  | wrong length of table data, x=[1753246365.0], y=[1020.0] (must be same and length>=4)
[2025-07-22 21:55:32] 2025-07-23 04:55:01,105 | INFO     | could have reported an average CPU frequency of 2095 MHz (4 samples)
[2025-07-22 21:55:32] 2025-07-23 04:55:01,106 | INFO     | ..............................
[2025-07-22 21:55:32] 2025-07-23 04:55:01,106 | INFO     | . Timing measurements:
[2025-07-22 21:55:32] 2025-07-23 04:55:01,106 | INFO     | . get job = 0 s
[2025-07-22 21:55:32] 2025-07-23 04:55:01,106 | INFO     | . initial setup = 2 s
[2025-07-22 21:55:32] 2025-07-23 04:55:01,106 | INFO     | . payload setup = 3 s
[2025-07-22 21:55:32] 2025-07-23 04:55:01,106 | INFO     | . stage-in = 0 s
[2025-07-22 21:55:32] 2025-07-23 04:55:01,106 | INFO     | . payload execution = 15 s
[2025-07-22 21:55:32] 2025-07-23 04:55:01,106 | INFO     | . stage-out = 0 s
[2025-07-22 21:55:32] 2025-07-23 04:55:01,106 | INFO     | . log creation = 0 s
[2025-07-22 21:55:32] 2025-07-23 04:55:01,106 | INFO     | ..............................
[2025-07-22 21:55:32] 2025-07-23 04:55:01,106 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-07-22 21:55:32] 2025-07-23 04:55:01,106 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6741871316/pilotlog.txt
[2025-07-22 21:55:32] 2025-07-23 04:55:01,115 | WARNING  | 
[2025-07-22 21:55:32] [begin log extracts]
[2025-07-22 21:55:32] - Log from pilotlog.txt -
[2025-07-22 21:55:32] 2025-07-23 04:55:01,104 | INFO     | extracted standard memory fields from prmon json
[2025-07-22 21:55:32] 2025-07-23 04:55:01,104 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-22 21:55:32] 2025-07-23 04:55:01,104 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-22 21:55:32] 2025-07-23 04:55:01,104 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-22 21:55:32] 2025-07-23 04:55:01,104 | WARNING  | found no stored workdir sizes
[2025-07-22 21:55:32] 2025-07-23 04:55:01,105 | INFO     | will not add max space = 0 B to job metrics
[2025-07-22 21:55:32] 2025-07-23 04:55:01,105 | WARNING  | wrong length of table data, x=[1753246365.0], y=[1020.0] (must be same and length>=4)
[2025-07-22 21:55:32] 2025-07-23 04:55:01,105 | INFO     | could have reported an average CPU frequency of 2095 MHz (4 samples)
[2025-07-22 21:55:32] 2025-07-23 04:55:01,106 | INFO     | ..............................
[2025-07-22 21:55:32] 2025-07-23 04:55:01,106 | INFO     | . Timing measurements:
[2025-07-22 21:55:32] 2025-07-23 04:55:01,106 | INFO     | . get job = 0 s
[2025-07-22 21:55:32] 2025-07-23 04:55:01,106 | INFO     | . initial setup = 2 s
[2025-07-22 21:55:32] 2025-07-23 04:55:01,106 | INFO     | . payload setup = 3 s
[2025-07-22 21:55:32] 2025-07-23 04:55:01,106 | INFO     | . stage-in = 0 s
[2025-07-22 21:55:32] 2025-07-23 04:55:01,106 | INFO     | . payload execution = 15 s
[2025-07-22 21:55:32] 2025-07-23 04:55:01,106 | INFO     | . stage-out = 0 s
[2025-07-22 21:55:32] 2025-07-23 04:55:01,106 | INFO     | . log creation = 0 s
[2025-07-22 21:55:32] 2025-07-23 04:55:01,106 | INFO     | ..............................
[2025-07-22 21:55:32] 2025-07-23 04:55:01,106 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-07-22 21:55:32] 2025-07-23 04:55:01,106 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6741871316/pilotlog.txt
[2025-07-22 21:55:32] [end log extracts]
[2025-07-22 21:55:32] 2025-07-23 04:55:01,115 | WARNING  | pilotErrorCodes = [1305] (will report primary/first error code)
[2025-07-22 21:55:32] 2025-07-23 04:55:01,116 | WARNING  | pilotErrorDiags = ['Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return c
[2025-07-22 21:55:32] 2025-07-23 04:55:01,192 | INFO     | 
[2025-07-22 21:55:32] 2025-07-23 04:55:01,193 | INFO     | job summary report
[2025-07-22 21:55:32] 2025-07-23 04:55:01,193 | INFO     | --------------------------------------------------
[2025-07-22 21:55:32] 2025-07-23 04:55:01,193 | INFO     | PanDA job id: 6741871316
[2025-07-22 21:55:32] 2025-07-23 04:55:01,193 | INFO     | task id: 45697490
[2025-07-22 21:55:32] 2025-07-23 04:55:01,193 | INFO     | error 1/1: 1305: Failed to execute payload:PyJobTransforms.transform.execute 2025-07-22 21:52:52,661 CRITICAL Transform executor raised TransformValidationExceptio
[2025-07-22 21:55:32] 2025-07-23 04:55:01,193 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-22 21:55:32] 2025-07-23 04:55:01,193 | INFO     | pilot state: failed 
[2025-07-22 21:55:32] 2025-07-23 04:55:01,193 | INFO     | transexitcode: 65
[2025-07-22 21:55:32] 2025-07-23 04:55:01,193 | INFO     | exeerrorcode: 65
[2025-07-22 21:55:32] 2025-07-23 04:55:01,193 | INFO     | exeerrordiag: Non-zero return code from EVNTtoHITS (1)
[2025-07-22 21:55:32] 2025-07-23 04:55:01,193 | INFO     | exitcode: 65
[2025-07-22 21:55:32] 2025-07-23 04:55:01,193 | INFO     | exitmsg: Non-zero return code from EVNTtoHITS (1)
[2025-07-22 21:55:32] 2025-07-23 04:55:01,193 | INFO     | cpuconsumptiontime: 16 s
[2025-07-22 21:55:32] 2025-07-23 04:55:01,194 | INFO     | nevents: 0
[2025-07-22 21:55:32] 2025-07-23 04:55:01,194 | INFO     | neventsw: 0
[2025-07-22 21:55:32] 2025-07-23 04:55:01,194 | INFO     | pid: 259862
[2025-07-22 21:55:32] 2025-07-23 04:55:01,194 | INFO     | pgrp: 259862
[2025-07-22 21:55:32] 2025-07-23 04:55:01,194 | INFO     | corecount: 8
[2025-07-22 21:55:32] 2025-07-23 04:55:01,194 | INFO     | event service: False
[2025-07-22 21:55:32] 2025-07-23 04:55:01,194 | INFO     | sizes: {0: 2397501, 3: 2397763, 11: 2397791, 22: 2425282, 24: 2425282, 143: 2425448}
[2025-07-22 21:55:32] 2025-07-23 04:55:01,194 | INFO     | --------------------------------------------------
[2025-07-22 21:55:32] 2025-07-23 04:55:01,194 | INFO     | 
[2025-07-22 21:55:32] 2025-07-23 04:55:01,194 | INFO     | executing command: ls -lF /home/boinc/slots/0
[2025-07-22 21:55:32] 2025-07-23 04:55:01,206 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-22 21:55:32] 2025-07-23 04:55:01,207 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-22 21:55:32] 2025-07-23 04:55:01,207 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-22 21:55:32] 2025-07-23 04:55:01,207 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-22 21:55:32] 2025-07-23 04:55:01,207 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-22 21:55:32] 2025-07-23 04:55:01,207 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-22 21:55:32] 2025-07-23 04:55:01,207 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-22 21:55:32] 2025-07-23 04:55:01,207 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-22 21:55:32] 2025-07-23 04:55:01,207 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-22 21:55:32] 2025-07-23 04:55:01,207 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-22 21:55:32] 2025-07-23 04:55:01,207 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-22 21:55:32] 2025-07-23 04:55:01,207 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-22 21:55:32] 2025-07-23 04:55:01,207 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-22 21:55:32] 2025-07-23 04:55:01,207 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-22 21:55:32] 2025-07-23 04:55:01,207 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-22 21:55:32] 2025-07-23 04:55:01,208 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-22 21:55:32] 2025-07-23 04:55:01,208 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-22 21:55:32] 2025-07-23 04:55:01,208 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-22 21:55:32] 2025-07-23 04:55:01,208 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-22 21:55:32] 2025-07-23 04:55:01,208 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-22 21:55:32] 2025-07-23 04:55:01,208 | INFO     | job 6741871316 has completed (purged errors)
[2025-07-22 21:55:32] 2025-07-23 04:55:01,208 | INFO     | overall cleanup function is called
[2025-07-22 21:55:32] 2025-07-23 04:55:02,214 | INFO     | --- collectZombieJob: --- 10, [259862]
[2025-07-22 21:55:32] 2025-07-23 04:55:02,215 | INFO     | zombie collector waiting for pid 259862
[2025-07-22 21:55:32] 2025-07-23 04:55:02,215 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-22 21:55:32] 2025-07-23 04:55:02,215 | INFO     | collected zombie processes
[2025-07-22 21:55:32] 2025-07-23 04:55:02,215 | INFO     | will attempt to kill all subprocesses of pid=259862
[2025-07-22 21:55:32] 2025-07-23 04:55:02,361 | INFO     | process IDs to be killed: [259862] (in reverse order)
[2025-07-22 21:55:32] 2025-07-23 04:55:02,410 | WARNING  | found no corresponding commands to process id(s)
[2025-07-22 21:55:32] 2025-07-23 04:55:02,410 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-22 21:55:32] 2025-07-23 04:55:02,416 | INFO     | did not find any defunct processes belonging to 259862
[2025-07-22 21:55:32] 2025-07-23 04:55:02,420 | INFO     | did not find any defunct processes belonging to 259862
[2025-07-22 21:55:32] 2025-07-23 04:55:02,421 | INFO     | ready for new job
[2025-07-22 21:55:32] 2025-07-23 04:55:02,421 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-22 21:55:32] 2025-07-23 04:55:02,423 | INFO     | ***************************************
[2025-07-22 21:55:32] 2025-07-23 04:55:02,423 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-22 21:55:32] 2025-07-23 04:55:02,423 | INFO     | ***************************************
[2025-07-22 21:55:32] 2025-07-23 04:55:02,423 | INFO     | 
[2025-07-22 21:55:32] 2025-07-23 04:55:02,437 | INFO     | architecture information:
[2025-07-22 21:55:32] 2025-07-23 04:55:02,438 | INFO     | executing command: cat /etc/os-release
[2025-07-22 21:55:32] 2025-07-23 04:55:02,446 | INFO     | cat /etc/os-release:
[2025-07-22 21:55:32] NAME="CentOS Linux"
[2025-07-22 21:55:32] VERSION="7 (Core)"
[2025-07-22 21:55:32] ID="centos"
[2025-07-22 21:55:32] ID_LIKE="rhel fedora"
[2025-07-22 21:55:32] VERSION_ID="7"
[2025-07-22 21:55:32] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-22 21:55:32] ANSI_COLOR="0;31"
[2025-07-22 21:55:32] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-22 21:55:32] HOME_URL="https://www.centos.org/"
[2025-07-22 21:55:32] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-22 21:55:32] 
[2025-07-22 21:55:32] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-22 21:55:32] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-22 21:55:32] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-22 21:55:32] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-22 21:55:32] 
[2025-07-22 21:55:32] 2025-07-23 04:55:02,447 | INFO     | ***************************************
[2025-07-22 21:55:32] 2025-07-23 04:55:02,949 | INFO     | executing command: df -mP /home/boinc/slots/0
[2025-07-22 21:55:32] 2025-07-23 04:55:02,962 | INFO     | sufficient remaining disk space (1413261295616 B)
[2025-07-22 21:55:32] 2025-07-23 04:55:02,963 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-22 21:55:32] 2025-07-23 04:55:02,963 | INFO     | current server update state: UPDATING_FINAL
[2025-07-22 21:55:32] 2025-07-23 04:55:02,963 | INFO     | update_server=False
[2025-07-22 21:55:32] 2025-07-23 04:55:02,963 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-22 21:55:32] 2025-07-23 04:55:02,963 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-22 21:55:32] 2025-07-23 04:55:03,223 | INFO     | all payload control threads have been joined
[2025-07-22 21:55:32] 2025-07-23 04:55:03,435 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-22 21:55:32] 2025-07-23 04:55:03,448 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-07-22 21:55:32] 2025-07-23 04:55:03,448 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-07-22 21:55:32] 2025-07-23 04:55:03,448 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-22 21:55:32] 2025-07-23 04:55:03,449 | INFO     | will abort loop
[2025-07-22 21:55:32] 2025-07-23 04:55:03,723 | INFO     | all data control threads have been joined
[2025-07-22 21:55:32] 2025-07-23 04:55:03,968 | INFO     | [job] retrieve thread has finished
[2025-07-22 21:55:32] 2025-07-23 04:55:03,969 | INFO     | [job] queue monitor thread has finished
[2025-07-22 21:55:32] 2025-07-23 04:55:04,087 | INFO     | [payload] execute_payloads thread has finished
[2025-07-22 21:55:32] 2025-07-23 04:55:04,096 | INFO     | all job control threads have been joined
[2025-07-22 21:55:32] 2025-07-23 04:55:04,228 | INFO     | [payload] control thread has finished
[2025-07-22 21:55:32] 2025-07-23 04:55:04,403 | INFO     | [payload] failed_post thread has finished
[2025-07-22 21:55:32] 2025-07-23 04:55:04,453 | INFO     | [job] job monitor thread has finished
[2025-07-22 21:55:32] 2025-07-23 04:55:04,476 | INFO     | [job] validate thread has finished
[2025-07-22 21:55:32] 2025-07-23 04:55:04,604 | INFO     | [data] copytool_in thread has finished
[2025-07-22 21:55:32] 2025-07-23 04:55:04,654 | INFO     | [job] create_data_payload thread has finished
[2025-07-22 21:55:32] 2025-07-23 04:55:04,727 | INFO     | [data] control thread has finished
[2025-07-22 21:55:32] 2025-07-23 04:55:04,775 | INFO     | [payload] validate_post thread has finished
[2025-07-22 21:55:32] 2025-07-23 04:55:04,799 | INFO     | [payload] validate_pre thread has finished
[2025-07-22 21:55:32] 2025-07-23 04:55:05,101 | INFO     | [job] control thread has finished
[2025-07-22 21:55:32] 2025-07-23 04:55:05,126 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-22 21:55:32] 2025-07-23 04:55:05,363 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-22 21:55:32] 2025-07-23 04:55:05,440 | INFO     | [data] copytool_out thread has finished
[2025-07-22 21:55:32] 2025-07-23 04:55:09,129 | INFO     | [data] queue_monitor thread has finished
[2025-07-22 21:55:32] 2025-07-23 04:55:10,353 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140082549032768)>', '<ExcThread(monitor, started 140082010900224)>']
[2025-07-22 21:55:32] 2025-07-23 04:55:15,377 | INFO     | all workflow threads have been joined
[2025-07-22 21:55:32] 2025-07-23 04:55:15,377 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-22 21:55:32] 2025-07-23 04:55:15,377 | INFO     | traces error code: 0
[2025-07-22 21:55:32] 2025-07-23 04:55:15,378 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-22 21:55:32] 2025-07-23 04:55:32,513 | INFO     | PID=253557 has CPU usage=1.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-07-22 21:55:32] 2025-07-23 04:55:32,514 | INFO     | .. there are 12 such processes running
[2025-07-22 21:55:32] 2025-07-23 04:55:32,515 | INFO     | found 0 job(s) in 20 queues
[2025-07-22 21:55:32] 2025-07-23 04:55:32,515 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-22 21:55:32] 2025-07-23 04:55:32,515 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-22 21:55:32] 2025-07-23 04:55:32,515 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-22 21:55:32] 2025-07-23 04:55:32,515 | INFO     | [monitor] control thread has ended
[2025-07-22 21:55:32] 2025-07-23 04:55:32,629 [wrapper] ==== pilot stdout END ====
[2025-07-22 21:55:32] 2025-07-23 04:55:32,631 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-22 21:55:32] 2025-07-23 04:55:32,633 [wrapper] pilotpid: 253557
[2025-07-22 21:55:32] 2025-07-23 04:55:32,636 [wrapper] Pilot exit status: 0
[2025-07-22 21:55:32] 2025-07-23 04:55:32,643 [wrapper] pandaids: 6741871316
[2025-07-22 21:55:32] 2025-07-23 04:55:32,674 [wrapper] cleanup supervisor_pilot  253563 253558
[2025-07-22 21:55:32] 2025-07-23 04:55:32,676 [wrapper] Test setup, not cleaning
[2025-07-22 21:55:32] 2025-07-23 04:55:32,678 [wrapper] apfmon messages muted
[2025-07-22 21:55:32] 2025-07-23 04:55:32,680 [wrapper] ==== wrapper stdout END ====
[2025-07-22 21:55:32] 2025-07-23 04:55:32,681 [wrapper] ==== wrapper stderr END ====
[2025-07-22 21:55:32]  *** Error codes and diagnostics ***
[2025-07-22 21:55:32]     "exeErrorCode": 65,
[2025-07-22 21:55:32]     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (1)",
[2025-07-22 21:55:32]     "pilotErrorCode": 1305,
[2025-07-22 21:55:32]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (1)",
[2025-07-22 21:55:32]  *** Listing of results directory ***
[2025-07-22 21:55:32] total 343984
[2025-07-22 21:55:32] -rw-r--r--. 1 boinc boinc    530466 Jul 22 17:24 pilot3.tar.gz
[2025-07-22 21:55:32] -rwx------. 1 boinc boinc     36292 Jul 22 18:15 runpilot2-wrapper.sh
[2025-07-22 21:55:32] -rw-r--r--. 1 boinc boinc      5112 Jul 22 18:15 queuedata.json
[2025-07-22 21:55:32] -rw-r--r--. 1 boinc boinc       100 Jul 22 21:52 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-22 21:55:32] -rwxr-xr-x. 1 boinc boinc      7986 Jul 22 21:52 run_atlas
[2025-07-22 21:55:32] -rw-r--r--. 1 boinc boinc       105 Jul 22 21:52 job.xml
[2025-07-22 21:55:32] -rw-r--r--. 2 boinc boinc 348172846 Jul 22 21:52 EVNT.45697488._000166.pool.root.1
[2025-07-22 21:55:32] drwxrwx--x. 2 boinc boinc      4096 Jul 22 21:52 shared
[2025-07-22 21:55:32] -rw-r--r--. 2 boinc boinc    542904 Jul 22 21:52 input.tar.gz
[2025-07-22 21:55:32] -rw-r--r--. 1 boinc boinc      6448 Jul 22 21:52 init_data.xml
[2025-07-22 21:55:32] -rw-r--r--. 2 boinc boinc     15095 Jul 22 21:52 start_atlas.sh
[2025-07-22 21:55:32] -rw-r--r--. 1 boinc boinc         0 Jul 22 21:52 boinc_lockfile
[2025-07-22 21:55:32] -rw-r--r--. 1 boinc boinc      2590 Jul 22 21:52 pandaJob.out
[2025-07-22 21:55:32] -rw-------. 1 boinc boinc    977736 Jul 22 21:52 agis_schedconf.cvmfs.json
[2025-07-22 21:55:32] -rw-------. 1 boinc boinc   1593031 Jul 22 21:52 agis_ddmendpoints.agis.ALL.json
[2025-07-22 21:55:32] drwx------. 4 boinc boinc      4096 Jul 22 21:52 pilot3
[2025-07-22 21:55:32] -rw-r--r--. 1 boinc boinc       523 Jul 22 21:52 boinc_task_state.xml
[2025-07-22 21:55:32] -rw-------. 1 boinc boinc       964 Jul 22 21:52 memory_monitor_summary.json
[2025-07-22 21:55:32] -rw-------. 1 boinc boinc     20837 Jul 22 21:53 log.45697490._003721.job.log.tgz.1
[2025-07-22 21:55:32] -rw-------. 1 boinc boinc      8380 Jul 22 21:55 heartbeat.json
[2025-07-22 21:55:32] -rw-r--r--. 1 boinc boinc      8192 Jul 22 21:55 boinc_mmap_file
[2025-07-22 21:55:32] -rw-r--r--. 1 boinc boinc        22 Jul 22 21:55 wrapper_checkpoint.txt
[2025-07-22 21:55:32] -rw-------. 1 boinc boinc        95 Jul 22 21:55 pilot_heartbeat.json
[2025-07-22 21:55:32] -rw-------. 1 boinc boinc       822 Jul 22 21:55 pilotlog.txt
[2025-07-22 21:55:32] -rw-------. 1 boinc boinc     74571 Jul 22 21:55 log.45697490._003721.job.log.1
[2025-07-22 21:55:32] -rw-------. 1 boinc boinc       188 Jul 22 21:55 output.list
[2025-07-22 21:55:32] -rw-r--r--. 1 boinc boinc       620 Jul 22 21:55 runtime_log
[2025-07-22 21:55:32] -rw-------. 1 boinc boinc    112640 Jul 22 21:55 result.tar.gz
[2025-07-22 21:55:32] -rw-------. 1 boinc boinc       644 Jul 22 21:55 uadMDmBGdy7n9Rq4apOajLDm4fhM0noT9bVof3QYDm6dvKDmQXsc2m.diag
[2025-07-22 21:55:32] -rw-r--r--. 1 boinc boinc      8648 Jul 22 21:55 runtime_log.err
[2025-07-22 21:55:32] -rw-r--r--. 1 boinc boinc     21806 Jul 22 21:55 stderr.txt
[2025-07-22 21:55:32] No HITS result produced
[2025-07-22 21:55:32]  *** Contents of shared directory: ***
[2025-07-22 21:55:32] total 340680
[2025-07-22 21:55:32] -rw-r--r--. 2 boinc boinc 348172846 Jul 22 21:52 ATLAS.root_0
[2025-07-22 21:55:32] -rw-r--r--. 2 boinc boinc    542904 Jul 22 21:52 input.tar.gz
[2025-07-22 21:55:32] -rw-r--r--. 2 boinc boinc     15095 Jul 22 21:52 start_atlas.sh
[2025-07-22 21:55:32] -rw-------. 1 boinc boinc    112640 Jul 22 21:55 result.tar.gz
21:55:34 (249986): run_atlas exited; CPU time 20.302037
21:55:34 (249986): called boinc_finish(0)

</stderr_txt>
]]>

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