Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
21:49:33 (834245): wrapper (7.7.26015): starting
21:49:33 (834245): wrapper: running run_atlas (--nthreads 8)
[2025-07-22 21:49:33] Arguments: --nthreads 8
[2025-07-22 21:49:33] Threads: 8
[2025-07-22 21:49:33] Checking for CVMFS
[2025-07-22 21:49:34] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-22 21:49:34] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-22 21:49:34] Running cvmfs_config stat atlas.cern.ch
[2025-07-22 21:49:34] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-22 21:49:34] 2.11.3.0 22724 472687 164248 148646 3 372 44925507 45568000 10370 130560 0 2524118125 99.768 1949686234 17416 http://cvmfs-s1bnl.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://206.12.9.163:3129 1
[2025-07-22 21:49:34] CVMFS is ok
[2025-07-22 21:49:34] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-07-22 21:49:34] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-07-22 21:49:34] Further information can be found at the LHC@home message board.
[2025-07-22 21:49:34] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-22 21:49:34] Checking for apptainer binary...
[2025-07-22 21:49:34] Using apptainer found in PATH at /usr/bin/apptainer
[2025-07-22 21:49:34] Running /usr/bin/apptainer --version
[2025-07-22 21:49:34] apptainer version 1.3.3-1.el9
[2025-07-22 21:49:34] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-22 21:49:34] WARNING: Environment variable TMPDIR already has value [/home/boinc/slots/0/.apptainertmp], will not forward new value [/home/boinc] from parent process environment wns0020.triumf.lcg
[2025-07-22 21:49:34] apptainer works
[2025-07-22 21:49:34] Set ATHENA_PROC_NUMBER=8
[2025-07-22 21:49:34] Set ATHENA_CORE_NUMBER=8
[2025-07-22 21:49:34] Starting ATLAS job with PandaID=6741871143
[2025-07-22 21:49:34] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-22 21:56:10]  *** The last 200 lines of the pilot log: ***
[2025-07-22 21:56:10] 2025-07-23 04:55:36,419 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-22 21:56:10] 2025-07-23 04:55:36,420 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-22 21:56:10] 2025-07-23 04:55:36,420 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-22 21:56:10] 2025-07-23 04:55:36,421 | WARNING  | wrong length of table data, x=[1753246315.0], y=[1056.0] (must be same and length>=4)
[2025-07-22 21:56:10] 2025-07-23 04:55:36,421 | INFO     | could have reported an average CPU frequency of 2095 MHz (4 samples)
[2025-07-22 21:56:10] 2025-07-23 04:55:36,426 | INFO     | ..............................
[2025-07-22 21:56:10] 2025-07-23 04:55:36,426 | INFO     | . Timing measurements:
[2025-07-22 21:56:10] 2025-07-23 04:55:36,426 | INFO     | . get job = 0 s
[2025-07-22 21:56:10] 2025-07-23 04:55:36,426 | INFO     | . initial setup = 4 s
[2025-07-22 21:56:10] 2025-07-23 04:55:36,427 | INFO     | . payload setup = 33 s
[2025-07-22 21:56:10] 2025-07-23 04:55:36,427 | INFO     | . stage-in = 0 s
[2025-07-22 21:56:10] 2025-07-23 04:55:36,427 | INFO     | . payload execution = 71 s
[2025-07-22 21:56:10] 2025-07-23 04:55:36,427 | INFO     | . stage-out = 2 s
[2025-07-22 21:56:10] 2025-07-23 04:55:36,427 | INFO     | . log creation = 0 s
[2025-07-22 21:56:10] 2025-07-23 04:55:36,427 | INFO     | ..............................
[2025-07-22 21:56:10] 2025-07-23 04:55:36,427 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-07-22 21:56:10] 2025-07-23 04:55:36,427 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6741871143/pilotlog.txt
[2025-07-22 21:56:10] 2025-07-23 04:55:36,480 | WARNING  | detected the following tail of warning/fatal messages in the pilot log:
[2025-07-22 21:56:10] - Log from pilotlog.txt -
[2025-07-22 21:56:10] 2025-07-23 04:55:36,419 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6741871143/memory_monitor_summary.json (trf name=prmon)
[2025-07-22 21:56:10] 2025-07-23 04:55:36,419 | INFO     | extracted standard info from prmon json
[2025-07-22 21:56:10] 2025-07-23 04:55:36,419 | INFO     | extracted standard memory fields from prmon json
[2025-07-22 21:56:10] 2025-07-23 04:55:36,419 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-22 21:56:10] 2025-07-23 04:55:36,420 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-22 21:56:10] 2025-07-23 04:55:36,420 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-22 21:56:10] 2025-07-23 04:55:36,421 | WARNING  | wrong length of table data, x=[1753246315.0], y=[1056.0] (must be same and length>=4)
[2025-07-22 21:56:10] 2025-07-23 04:55:36,421 | INFO     | could have reported an average CPU frequency of 2095 MHz (4 samples)
[2025-07-22 21:56:10] 2025-07-23 04:55:36,426 | INFO     | ..............................
[2025-07-22 21:56:10] 2025-07-23 04:55:36,426 | INFO     | . Timing measurements:
[2025-07-22 21:56:10] 2025-07-23 04:55:36,426 | INFO     | . get job = 0 s
[2025-07-22 21:56:10] 2025-07-23 04:55:36,426 | INFO     | . initial setup = 4 s
[2025-07-22 21:56:10] 2025-07-23 04:55:36,427 | INFO     | . payload setup = 33 s
[2025-07-22 21:56:10] 2025-07-23 04:55:36,427 | INFO     | . stage-in = 0 s
[2025-07-22 21:56:10] 2025-07-23 04:55:36,427 | INFO     | . payload execution = 71 s
[2025-07-22 21:56:10] 2025-07-23 04:55:36,427 | INFO     | . stage-out = 2 s
[2025-07-22 21:56:10] 2025-07-23 04:55:36,427 | INFO     | . log creation = 0 s
[2025-07-22 21:56:10] 2025-07-23 04:55:36,427 | INFO     | ..............................
[2025-07-22 21:56:10] 2025-07-23 04:55:36,427 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-07-22 21:56:10] 2025-07-23 04:55:36,427 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6741871143/pilotlog.txt
[2025-07-22 21:56:10] 2025-07-23 04:55:36,481 | WARNING  | 
[2025-07-22 21:56:10] [begin log extracts]
[2025-07-22 21:56:10] - Log from pilotlog.txt -
[2025-07-22 21:56:10] 2025-07-23 04:55:36,419 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6741871143/memory_monitor_summary.json (trf name=prmon)
[2025-07-22 21:56:10] 2025-07-23 04:55:36,419 | INFO     | extracted standard info from prmon json
[2025-07-22 21:56:10] 2025-07-23 04:55:36,419 | INFO     | extracted standard memory fields from prmon json
[2025-07-22 21:56:10] 2025-07-23 04:55:36,419 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-22 21:56:10] 2025-07-23 04:55:36,420 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-22 21:56:10] 2025-07-23 04:55:36,420 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-22 21:56:10] 2025-07-23 04:55:36,421 | WARNING  | wrong length of table data, x=[1753246315.0], y=[1056.0] (must be same and length>=4)
[2025-07-22 21:56:10] 2025-07-23 04:55:36,421 | INFO     | could have reported an average CPU frequency of 2095 MHz (4 samples)
[2025-07-22 21:56:10] 2025-07-23 04:55:36,426 | INFO     | ..............................
[2025-07-22 21:56:10] 2025-07-23 04:55:36,426 | INFO     | . Timing measurements:
[2025-07-22 21:56:10] 2025-07-23 04:55:36,426 | INFO     | . get job = 0 s
[2025-07-22 21:56:10] 2025-07-23 04:55:36,426 | INFO     | . initial setup = 4 s
[2025-07-22 21:56:10] 2025-07-23 04:55:36,427 | INFO     | . payload setup = 33 s
[2025-07-22 21:56:10] 2025-07-23 04:55:36,427 | INFO     | . stage-in = 0 s
[2025-07-22 21:56:10] 2025-07-23 04:55:36,427 | INFO     | . payload execution = 71 s
[2025-07-22 21:56:10] 2025-07-23 04:55:36,427 | INFO     | . stage-out = 2 s
[2025-07-22 21:56:10] 2025-07-23 04:55:36,427 | INFO     | . log creation = 0 s
[2025-07-22 21:56:10] 2025-07-23 04:55:36,427 | INFO     | ..............................
[2025-07-22 21:56:10] 2025-07-23 04:55:36,427 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-07-22 21:56:10] 2025-07-23 04:55:36,427 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6741871143/pilotlog.txt
[2025-07-22 21:56:10] [end log extracts]
[2025-07-22 21:56:10] 2025-07-23 04:55:36,481 | WARNING  | pilotErrorCodes = [1305] (will report primary/first error code)
[2025-07-22 21:56:10] 2025-07-23 04:55:36,482 | WARNING  | pilotErrorDiags = ['Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return c
[2025-07-22 21:56:10] 2025-07-23 04:55:36,963 | INFO     | 
[2025-07-22 21:56:10] 2025-07-23 04:55:36,963 | INFO     | job summary report
[2025-07-22 21:56:10] 2025-07-23 04:55:36,963 | INFO     | --------------------------------------------------
[2025-07-22 21:56:10] 2025-07-23 04:55:36,964 | INFO     | PanDA job id: 6741871143
[2025-07-22 21:56:10] 2025-07-23 04:55:36,964 | INFO     | task id: 45697490
[2025-07-22 21:56:10] 2025-07-23 04:55:36,964 | INFO     | error 1/1: 1305: Failed to execute payload:PyJobTransforms.transform.execute 2025-07-22 21:52:45,994 CRITICAL Transform executor raised TransformValidationExceptio
[2025-07-22 21:56:10] 2025-07-23 04:55:36,964 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-22 21:56:10] 2025-07-23 04:55:36,964 | INFO     | pilot state: failed 
[2025-07-22 21:56:10] 2025-07-23 04:55:36,964 | INFO     | transexitcode: 65
[2025-07-22 21:56:10] 2025-07-23 04:55:36,964 | INFO     | exeerrorcode: 65
[2025-07-22 21:56:10] 2025-07-23 04:55:36,964 | INFO     | exeerrordiag: Non-zero return code from EVNTtoHITS (1)
[2025-07-22 21:56:10] 2025-07-23 04:55:36,964 | INFO     | exitcode: 65
[2025-07-22 21:56:10] 2025-07-23 04:55:36,964 | INFO     | exitmsg: Non-zero return code from EVNTtoHITS (1)
[2025-07-22 21:56:10] 2025-07-23 04:55:36,964 | INFO     | cpuconsumptiontime: 18 s
[2025-07-22 21:56:10] 2025-07-23 04:55:36,964 | INFO     | nevents: 0
[2025-07-22 21:56:10] 2025-07-23 04:55:36,964 | INFO     | neventsw: 0
[2025-07-22 21:56:10] 2025-07-23 04:55:36,964 | INFO     | pid: 844359
[2025-07-22 21:56:10] 2025-07-23 04:55:36,965 | INFO     | pgrp: 844359
[2025-07-22 21:56:10] 2025-07-23 04:55:36,965 | INFO     | corecount: 8
[2025-07-22 21:56:10] 2025-07-23 04:55:36,965 | INFO     | event service: False
[2025-07-22 21:56:10] 2025-07-23 04:55:36,965 | INFO     | sizes: {0: 2396676, 1: 2397274, 2: 2397358, 3: 2397585, 4: 2397585, 15: 2397613, 27: 2397769, 28: 2398059, 38: 2398087, 109: 2421370, 110: 2421374, 113: 2425974, 1
[2025-07-22 21:56:10] 2025-07-23 04:55:36,965 | INFO     | --------------------------------------------------
[2025-07-22 21:56:10] 2025-07-23 04:55:36,965 | INFO     | 
[2025-07-22 21:56:10] 2025-07-23 04:55:36,965 | INFO     | executing command: ls -lF /home/boinc/slots/0
[2025-07-22 21:56:10] 2025-07-23 04:55:37,297 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-22 21:56:10] 2025-07-23 04:55:37,297 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-22 21:56:10] 2025-07-23 04:55:37,297 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-22 21:56:10] 2025-07-23 04:55:37,297 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-22 21:56:10] 2025-07-23 04:55:37,297 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-22 21:56:10] 2025-07-23 04:55:37,297 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-22 21:56:10] 2025-07-23 04:55:37,297 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-22 21:56:10] 2025-07-23 04:55:37,297 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-22 21:56:10] 2025-07-23 04:55:37,297 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-22 21:56:10] 2025-07-23 04:55:37,297 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-22 21:56:10] 2025-07-23 04:55:37,298 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-22 21:56:10] 2025-07-23 04:55:37,298 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-22 21:56:10] 2025-07-23 04:55:37,298 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-22 21:56:10] 2025-07-23 04:55:37,317 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-22 21:56:10] 2025-07-23 04:55:37,317 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-22 21:56:10] 2025-07-23 04:55:37,317 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-22 21:56:10] 2025-07-23 04:55:37,317 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-22 21:56:10] 2025-07-23 04:55:37,318 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-22 21:56:10] 2025-07-23 04:55:37,318 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-22 21:56:10] 2025-07-23 04:55:37,318 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-22 21:56:10] 2025-07-23 04:55:37,318 | INFO     | job 6741871143 has completed (purged errors)
[2025-07-22 21:56:10] 2025-07-23 04:55:37,318 | INFO     | overall cleanup function is called
[2025-07-22 21:56:10] 2025-07-23 04:55:38,325 | INFO     | --- collectZombieJob: --- 10, [844359]
[2025-07-22 21:56:10] 2025-07-23 04:55:38,325 | INFO     | zombie collector waiting for pid 844359
[2025-07-22 21:56:10] 2025-07-23 04:55:38,325 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-22 21:56:10] 2025-07-23 04:55:38,326 | INFO     | collected zombie processes
[2025-07-22 21:56:10] 2025-07-23 04:55:38,326 | INFO     | will attempt to kill all subprocesses of pid=844359
[2025-07-22 21:56:10] 2025-07-23 04:55:39,484 | INFO     | process IDs to be killed: [844359] (in reverse order)
[2025-07-22 21:56:10] 2025-07-23 04:55:40,077 | WARNING  | found no corresponding commands to process id(s)
[2025-07-22 21:56:10] 2025-07-23 04:55:40,078 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-22 21:56:10] 2025-07-23 04:55:40,099 | INFO     | did not find any defunct processes belonging to 844359
[2025-07-22 21:56:10] 2025-07-23 04:55:40,170 | INFO     | did not find any defunct processes belonging to 844359
[2025-07-22 21:56:10] 2025-07-23 04:55:40,171 | INFO     | ready for new job
[2025-07-22 21:56:10] 2025-07-23 04:55:40,171 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-22 21:56:10] 2025-07-23 04:55:40,172 | INFO     | ***************************************
[2025-07-22 21:56:10] 2025-07-23 04:55:40,172 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-22 21:56:10] 2025-07-23 04:55:40,172 | INFO     | ***************************************
[2025-07-22 21:56:10] 2025-07-23 04:55:40,173 | INFO     | 
[2025-07-22 21:56:10] 2025-07-23 04:55:40,188 | INFO     | architecture information:
[2025-07-22 21:56:10] 2025-07-23 04:55:40,214 | INFO     | executing command: cat /etc/os-release
[2025-07-22 21:56:10] 2025-07-23 04:55:40,384 | INFO     | cat /etc/os-release:
[2025-07-22 21:56:10] NAME="CentOS Linux"
[2025-07-22 21:56:10] VERSION="7 (Core)"
[2025-07-22 21:56:10] ID="centos"
[2025-07-22 21:56:10] ID_LIKE="rhel fedora"
[2025-07-22 21:56:10] VERSION_ID="7"
[2025-07-22 21:56:10] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-22 21:56:10] ANSI_COLOR="0;31"
[2025-07-22 21:56:10] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-22 21:56:10] HOME_URL="https://www.centos.org/"
[2025-07-22 21:56:10] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-22 21:56:10] 
[2025-07-22 21:56:10] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-22 21:56:10] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-22 21:56:10] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-22 21:56:10] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-22 21:56:10] 
[2025-07-22 21:56:10] 2025-07-23 04:55:40,385 | INFO     | ***************************************
[2025-07-22 21:56:10] 2025-07-23 04:55:40,888 | INFO     | executing command: df -mP /home/boinc/slots/0
[2025-07-22 21:56:10] 2025-07-23 04:55:41,045 | INFO     | sufficient remaining disk space (1393618321408 B)
[2025-07-22 21:56:10] 2025-07-23 04:55:41,046 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-22 21:56:10] 2025-07-23 04:55:41,046 | INFO     | current server update state: UPDATING_FINAL
[2025-07-22 21:56:10] 2025-07-23 04:55:41,046 | INFO     | update_server=False
[2025-07-22 21:56:10] 2025-07-23 04:55:41,046 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-22 21:56:10] 2025-07-23 04:55:41,049 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-22 21:56:10] 2025-07-23 04:55:41,174 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-22 21:56:10] 2025-07-23 04:55:41,174 | INFO     | aborting loop
[2025-07-22 21:56:10] 2025-07-23 04:55:41,523 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-22 21:56:10] 2025-07-23 04:55:41,779 | INFO     | all payload control threads have been joined
[2025-07-22 21:56:10] 2025-07-23 04:55:41,954 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-22 21:56:10] 2025-07-23 04:55:42,052 | INFO     | [job] retrieve thread has finished
[2025-07-22 21:56:10] 2025-07-23 04:55:42,074 | INFO     | all job control threads have been joined
[2025-07-22 21:56:10] 2025-07-23 04:55:42,145 | INFO     | all data control threads have been joined
[2025-07-22 21:56:10] 2025-07-23 04:55:42,180 | INFO     | [job] job monitor thread has finished
[2025-07-22 21:56:10] 2025-07-23 04:55:42,785 | INFO     | [payload] control thread has finished
[2025-07-22 21:56:10] 2025-07-23 04:55:42,851 | INFO     | [payload] execute_payloads thread has finished
[2025-07-22 21:56:10] 2025-07-23 04:55:42,960 | INFO     | [job] queue monitor thread has finished
[2025-07-22 21:56:10] 2025-07-23 04:55:43,080 | INFO     | [job] control thread has finished
[2025-07-22 21:56:10] 2025-07-23 04:55:43,151 | INFO     | [data] control thread has finished
[2025-07-22 21:56:10] 2025-07-23 04:55:43,251 | INFO     | [payload] failed_post thread has finished
[2025-07-22 21:56:10] 2025-07-23 04:55:43,255 | INFO     | [payload] validate_post thread has finished
[2025-07-22 21:56:10] 2025-07-23 04:55:43,327 | INFO     | [job] validate thread has finished
[2025-07-22 21:56:10] 2025-07-23 04:55:43,470 | INFO     | [payload] validate_pre thread has finished
[2025-07-22 21:56:10] 2025-07-23 04:55:43,471 | INFO     | [job] create_data_payload thread has finished
[2025-07-22 21:56:10] 2025-07-23 04:55:43,498 | INFO     | [data] copytool_in thread has finished
[2025-07-22 21:56:10] 2025-07-23 04:55:43,513 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-22 21:56:10] 2025-07-23 04:55:43,530 | INFO     | [data] copytool_out thread has finished
[2025-07-22 21:56:10] 2025-07-23 04:55:45,062 | INFO     | [data] queue_monitor thread has finished
[2025-07-22 21:56:10] 2025-07-23 04:55:45,904 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139779077142336)>', '<ExcThread(monitor, started 139778133571328)>']
[2025-07-22 21:56:10] 2025-07-23 04:55:50,930 | INFO     | all workflow threads have been joined
[2025-07-22 21:56:10] 2025-07-23 04:55:50,930 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-22 21:56:10] 2025-07-23 04:55:50,931 | INFO     | traces error code: 0
[2025-07-22 21:56:10] 2025-07-23 04:55:50,931 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-22 21:56:10] 2025-07-23 04:56:10,067 | INFO     | PID=837850 has CPU usage=1.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-07-22 21:56:10] 2025-07-23 04:56:10,068 | INFO     | .. there are 19 such processes running
[2025-07-22 21:56:10] 2025-07-23 04:56:10,068 | INFO     | found 0 job(s) in 20 queues
[2025-07-22 21:56:10] 2025-07-23 04:56:10,068 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-22 21:56:10] 2025-07-23 04:56:10,068 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-22 21:56:10] 2025-07-23 04:56:10,068 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-22 21:56:10] 2025-07-23 04:56:10,068 | CRITICAL | thread 'MainThread' is not alive
[2025-07-22 21:56:10] 2025-07-23 04:56:10,068 | INFO     | [monitor] control thread has ended
[2025-07-22 21:56:10] 2025-07-23 04:56:10,207 [wrapper] ==== pilot stdout END ====
[2025-07-22 21:56:10] 2025-07-23 04:56:10,209 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-22 21:56:10] 2025-07-23 04:56:10,211 [wrapper] pilotpid: 837850
[2025-07-22 21:56:10] 2025-07-23 04:56:10,213 [wrapper] Pilot exit status: 0
[2025-07-22 21:56:10] 2025-07-23 04:56:10,221 [wrapper] pandaids: 6741871143
[2025-07-22 21:56:10] 2025-07-23 04:56:10,258 [wrapper] cleanup supervisor_pilot  837858 837851
[2025-07-22 21:56:10] 2025-07-23 04:56:10,260 [wrapper] Test setup, not cleaning
[2025-07-22 21:56:10] 2025-07-23 04:56:10,262 [wrapper] apfmon messages muted
[2025-07-22 21:56:10] 2025-07-23 04:56:10,263 [wrapper] ==== wrapper stdout END ====
[2025-07-22 21:56:10] 2025-07-23 04:56:10,265 [wrapper] ==== wrapper stderr END ====
[2025-07-22 21:56:10]  *** Error codes and diagnostics ***
[2025-07-22 21:56:10]     "exeErrorCode": 65,
[2025-07-22 21:56:10]     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (1)",
[2025-07-22 21:56:10]     "pilotErrorCode": 1305,
[2025-07-22 21:56:10]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (1)",
[2025-07-22 21:56:10]  *** Listing of results directory ***
[2025-07-22 21:56:10] total 339228
[2025-07-22 21:56:10] -rw-r--r--. 1 boinc boinc    530466 Jul 22 17:24 pilot3.tar.gz
[2025-07-22 21:56:10] -rw-r--r--. 1 boinc boinc      5112 Jul 22 18:01 queuedata.json
[2025-07-22 21:56:10] -rwx------. 1 boinc boinc     36292 Jul 22 18:05 runpilot2-wrapper.sh
[2025-07-22 21:56:10] -rw-r--r--. 1 boinc boinc       100 Jul 22 21:49 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-22 21:56:10] -rwxr-xr-x. 1 boinc boinc      7986 Jul 22 21:49 run_atlas
[2025-07-22 21:56:10] -rw-r--r--. 1 boinc boinc       105 Jul 22 21:49 job.xml
[2025-07-22 21:56:10] -rw-r--r--. 1 boinc boinc      6449 Jul 22 21:49 init_data.xml
[2025-07-22 21:56:10] -rw-r--r--. 2 boinc boinc 343288325 Jul 22 21:49 EVNT.45697488._000159.pool.root.1
[2025-07-22 21:56:10] -rw-r--r--. 2 boinc boinc     15095 Jul 22 21:49 start_atlas.sh
[2025-07-22 21:56:10] drwxrwx--x. 2 boinc boinc      4096 Jul 22 21:49 shared
[2025-07-22 21:56:10] -rw-r--r--. 2 boinc boinc    542907 Jul 22 21:49 input.tar.gz
[2025-07-22 21:56:10] -rw-r--r--. 1 boinc boinc         0 Jul 22 21:49 boinc_lockfile
[2025-07-22 21:56:10] -rw-r--r--. 1 boinc boinc      2590 Jul 22 21:49 pandaJob.out
[2025-07-22 21:56:10] -rw-------. 1 boinc boinc    977736 Jul 22 21:50 agis_schedconf.cvmfs.json
[2025-07-22 21:56:10] -rw-------. 1 boinc boinc   1593031 Jul 22 21:50 agis_ddmendpoints.agis.ALL.json
[2025-07-22 21:56:10] drwx------. 4 boinc boinc      4096 Jul 22 21:50 pilot3
[2025-07-22 21:56:10] -rw-r--r--. 1 boinc boinc       525 Jul 22 21:52 boinc_task_state.xml
[2025-07-22 21:56:10] -rw-------. 1 boinc boinc       950 Jul 22 21:52 memory_monitor_summary.json
[2025-07-22 21:56:10] -rw-------. 1 boinc boinc     21656 Jul 22 21:52 log.45697490._003548.job.log.tgz.1
[2025-07-22 21:56:10] -rw-------. 1 boinc boinc        95 Jul 22 21:55 pilot_heartbeat.json
[2025-07-22 21:56:10] -rw-------. 1 boinc boinc      8380 Jul 22 21:55 heartbeat.json
[2025-07-22 21:56:10] -rw-r--r--. 1 boinc boinc      8192 Jul 22 21:56 boinc_mmap_file
[2025-07-22 21:56:10] -rw-r--r--. 1 boinc boinc        23 Jul 22 21:56 wrapper_checkpoint.txt
[2025-07-22 21:56:10] -rw-------. 1 boinc boinc       892 Jul 22 21:56 pilotlog.txt
[2025-07-22 21:56:10] -rw-------. 1 boinc boinc     85118 Jul 22 21:56 log.45697490._003548.job.log.1
[2025-07-22 21:56:10] -rw-------. 1 boinc boinc       188 Jul 22 21:56 output.list
[2025-07-22 21:56:10] -rw-r--r--. 1 boinc boinc       620 Jul 22 21:56 runtime_log
[2025-07-22 21:56:10] -rw-------. 1 boinc boinc    122880 Jul 22 21:56 result.tar.gz
[2025-07-22 21:56:10] -rw-r--r--. 1 boinc boinc      8648 Jul 22 21:56 runtime_log.err
[2025-07-22 21:56:10] -rw-------. 1 boinc boinc       645 Jul 22 21:56 oC2MDm75cy7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmZaKLDmIjZc5n.diag
[2025-07-22 21:56:10] -rw-r--r--. 1 boinc boinc     21992 Jul 22 21:56 stderr.txt
[2025-07-22 21:56:10] No HITS result produced
[2025-07-22 21:56:10]  *** Contents of shared directory: ***
[2025-07-22 21:56:10] total 335916
[2025-07-22 21:56:10] -rw-r--r--. 2 boinc boinc 343288325 Jul 22 21:49 ATLAS.root_0
[2025-07-22 21:56:10] -rw-r--r--. 2 boinc boinc     15095 Jul 22 21:49 start_atlas.sh
[2025-07-22 21:56:10] -rw-r--r--. 2 boinc boinc    542907 Jul 22 21:49 input.tar.gz
[2025-07-22 21:56:10] -rw-------. 1 boinc boinc    122880 Jul 22 21:56 result.tar.gz
21:56:12 (834245): run_atlas exited; CPU time 29.696815
21:56:12 (834245): called boinc_finish(0)

</stderr_txt>
]]>

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