Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
21:46:05 (3349998): wrapper (7.7.26015): starting
21:46:05 (3349998): wrapper: running run_atlas (--nthreads 12)
[2025-07-22 21:46:05] Arguments: --nthreads 12
[2025-07-22 21:46:05] Threads: 12
[2025-07-22 21:46:05] Checking for CVMFS
[2025-07-22 21:46:05] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-22 21:46:05] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-22 21:46:05] Running cvmfs_config stat atlas.cern.ch
[2025-07-22 21:46:06] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-22 21:46:06] 2.11.5.0 3356172 22004 210136 148646 0 236 45522536 45568001 17316 130560 0 148478478 99.686 143622107 23676 http://cvmfs-s1bnl.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://206.12.9.164:3129 1
[2025-07-22 21:46:06] CVMFS is ok
[2025-07-22 21:46:06] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-07-22 21:46:06] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-07-22 21:46:06] Further information can be found at the LHC@home message board.
[2025-07-22 21:46:06] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-22 21:46:06] Checking for apptainer binary...
[2025-07-22 21:46:06] Using apptainer found in PATH at /usr/bin/apptainer
[2025-07-22 21:46:06] Running /usr/bin/apptainer --version
[2025-07-22 21:46:06] apptainer version 1.4.1-1.el9
[2025-07-22 21:46:06] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-22 21:46:06] wns0060.triumf.lcg
[2025-07-22 21:46:06] apptainer works
[2025-07-22 21:46:06] Set ATHENA_PROC_NUMBER=12
[2025-07-22 21:46:06] Set ATHENA_CORE_NUMBER=12
[2025-07-22 21:46:06] Starting ATLAS job with PandaID=6741871171
[2025-07-22 21:46:06] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-22 21:51:00]  *** The last 200 lines of the pilot log: ***
[2025-07-22 21:51:00] 2025-07-23 04:50:26,769 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-22 21:51:00] 2025-07-23 04:50:26,770 | WARNING  | wrong length of table data, x=[1753246063.0], y=[2676.0] (must be same and length>=4)
[2025-07-22 21:51:00] 2025-07-23 04:50:26,770 | INFO     | could have reported an average CPU frequency of 2509 MHz (4 samples)
[2025-07-22 21:51:00] 2025-07-23 04:50:26,770 | INFO     | ..............................
[2025-07-22 21:51:00] 2025-07-23 04:50:26,770 | INFO     | . Timing measurements:
[2025-07-22 21:51:00] 2025-07-23 04:50:26,770 | INFO     | . get job = 0 s
[2025-07-22 21:51:00] 2025-07-23 04:50:26,770 | INFO     | . initial setup = 4 s
[2025-07-22 21:51:00] 2025-07-23 04:50:26,770 | INFO     | . payload setup = 16 s
[2025-07-22 21:51:00] 2025-07-23 04:50:26,770 | INFO     | . stage-in = 0 s
[2025-07-22 21:51:00] 2025-07-23 04:50:26,770 | INFO     | . payload execution = 43 s
[2025-07-22 21:51:00] 2025-07-23 04:50:26,770 | INFO     | . stage-out = 2 s
[2025-07-22 21:51:00] 2025-07-23 04:50:26,770 | INFO     | . log creation = 0 s
[2025-07-22 21:51:00] 2025-07-23 04:50:26,770 | INFO     | ..............................
[2025-07-22 21:51:00] 2025-07-23 04:50:26,770 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-07-22 21:51:00] 2025-07-23 04:50:26,771 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6741871171/pilotlog.txt
[2025-07-22 21:51:00] 2025-07-23 04:50:26,827 | WARNING  | detected the following tail of warning/fatal messages in the pilot log:
[2025-07-22 21:51:00] - Log from pilotlog.txt -
[2025-07-22 21:51:00] 2025-07-23 04:50:26,767 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6741871171/memory_monitor_summary.json (trf name=prmon)
[2025-07-22 21:51:00] 2025-07-23 04:50:26,768 | INFO     | extracted standard info from prmon json
[2025-07-22 21:51:00] 2025-07-23 04:50:26,769 | INFO     | extracted standard memory fields from prmon json
[2025-07-22 21:51:00] 2025-07-23 04:50:26,769 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-22 21:51:00] 2025-07-23 04:50:26,769 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-22 21:51:00] 2025-07-23 04:50:26,769 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-22 21:51:00] 2025-07-23 04:50:26,770 | WARNING  | wrong length of table data, x=[1753246063.0], y=[2676.0] (must be same and length>=4)
[2025-07-22 21:51:00] 2025-07-23 04:50:26,770 | INFO     | could have reported an average CPU frequency of 2509 MHz (4 samples)
[2025-07-22 21:51:00] 2025-07-23 04:50:26,770 | INFO     | ..............................
[2025-07-22 21:51:00] 2025-07-23 04:50:26,770 | INFO     | . Timing measurements:
[2025-07-22 21:51:00] 2025-07-23 04:50:26,770 | INFO     | . get job = 0 s
[2025-07-22 21:51:00] 2025-07-23 04:50:26,770 | INFO     | . initial setup = 4 s
[2025-07-22 21:51:00] 2025-07-23 04:50:26,770 | INFO     | . payload setup = 16 s
[2025-07-22 21:51:00] 2025-07-23 04:50:26,770 | INFO     | . stage-in = 0 s
[2025-07-22 21:51:00] 2025-07-23 04:50:26,770 | INFO     | . payload execution = 43 s
[2025-07-22 21:51:00] 2025-07-23 04:50:26,770 | INFO     | . stage-out = 2 s
[2025-07-22 21:51:00] 2025-07-23 04:50:26,770 | INFO     | . log creation = 0 s
[2025-07-22 21:51:00] 2025-07-23 04:50:26,770 | INFO     | ..............................
[2025-07-22 21:51:00] 2025-07-23 04:50:26,770 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-07-22 21:51:00] 2025-07-23 04:50:26,771 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6741871171/pilotlog.txt
[2025-07-22 21:51:00] 2025-07-23 04:50:26,827 | WARNING  | 
[2025-07-22 21:51:00] [begin log extracts]
[2025-07-22 21:51:00] - Log from pilotlog.txt -
[2025-07-22 21:51:00] 2025-07-23 04:50:26,767 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6741871171/memory_monitor_summary.json (trf name=prmon)
[2025-07-22 21:51:00] 2025-07-23 04:50:26,768 | INFO     | extracted standard info from prmon json
[2025-07-22 21:51:00] 2025-07-23 04:50:26,769 | INFO     | extracted standard memory fields from prmon json
[2025-07-22 21:51:00] 2025-07-23 04:50:26,769 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-22 21:51:00] 2025-07-23 04:50:26,769 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-22 21:51:00] 2025-07-23 04:50:26,769 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-22 21:51:00] 2025-07-23 04:50:26,770 | WARNING  | wrong length of table data, x=[1753246063.0], y=[2676.0] (must be same and length>=4)
[2025-07-22 21:51:00] 2025-07-23 04:50:26,770 | INFO     | could have reported an average CPU frequency of 2509 MHz (4 samples)
[2025-07-22 21:51:00] 2025-07-23 04:50:26,770 | INFO     | ..............................
[2025-07-22 21:51:00] 2025-07-23 04:50:26,770 | INFO     | . Timing measurements:
[2025-07-22 21:51:00] 2025-07-23 04:50:26,770 | INFO     | . get job = 0 s
[2025-07-22 21:51:00] 2025-07-23 04:50:26,770 | INFO     | . initial setup = 4 s
[2025-07-22 21:51:00] 2025-07-23 04:50:26,770 | INFO     | . payload setup = 16 s
[2025-07-22 21:51:00] 2025-07-23 04:50:26,770 | INFO     | . stage-in = 0 s
[2025-07-22 21:51:00] 2025-07-23 04:50:26,770 | INFO     | . payload execution = 43 s
[2025-07-22 21:51:00] 2025-07-23 04:50:26,770 | INFO     | . stage-out = 2 s
[2025-07-22 21:51:00] 2025-07-23 04:50:26,770 | INFO     | . log creation = 0 s
[2025-07-22 21:51:00] 2025-07-23 04:50:26,770 | INFO     | ..............................
[2025-07-22 21:51:00] 2025-07-23 04:50:26,770 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-07-22 21:51:00] 2025-07-23 04:50:26,771 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6741871171/pilotlog.txt
[2025-07-22 21:51:00] [end log extracts]
[2025-07-22 21:51:00] 2025-07-23 04:50:26,828 | WARNING  | pilotErrorCodes = [1305] (will report primary/first error code)
[2025-07-22 21:51:00] 2025-07-23 04:50:26,828 | WARNING  | pilotErrorDiags = ['Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return c
[2025-07-22 21:51:00] 2025-07-23 04:50:27,015 | INFO     | 
[2025-07-22 21:51:00] 2025-07-23 04:50:27,016 | INFO     | job summary report
[2025-07-22 21:51:00] 2025-07-23 04:50:27,016 | INFO     | --------------------------------------------------
[2025-07-22 21:51:00] 2025-07-23 04:50:27,016 | INFO     | PanDA job id: 6741871171
[2025-07-22 21:51:00] 2025-07-23 04:50:27,016 | INFO     | task id: 45697490
[2025-07-22 21:51:00] 2025-07-23 04:50:27,016 | INFO     | error 1/1: 1305: Failed to execute payload:PyJobTransforms.transform.execute 2025-07-22 21:48:03,033 CRITICAL Transform executor raised TransformValidationExceptio
[2025-07-22 21:51:00] 2025-07-23 04:50:27,016 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-22 21:51:00] 2025-07-23 04:50:27,016 | INFO     | pilot state: failed 
[2025-07-22 21:51:00] 2025-07-23 04:50:27,016 | INFO     | transexitcode: 65
[2025-07-22 21:51:00] 2025-07-23 04:50:27,016 | INFO     | exeerrorcode: 65
[2025-07-22 21:51:00] 2025-07-23 04:50:27,016 | INFO     | exeerrordiag: Non-zero return code from EVNTtoHITS (1)
[2025-07-22 21:51:00] 2025-07-23 04:50:27,016 | INFO     | exitcode: 65
[2025-07-22 21:51:00] 2025-07-23 04:50:27,016 | INFO     | exitmsg: Non-zero return code from EVNTtoHITS (1)
[2025-07-22 21:51:00] 2025-07-23 04:50:27,016 | INFO     | cpuconsumptiontime: 16 s
[2025-07-22 21:51:00] 2025-07-23 04:50:27,016 | INFO     | nevents: 0
[2025-07-22 21:51:00] 2025-07-23 04:50:27,016 | INFO     | neventsw: 0
[2025-07-22 21:51:00] 2025-07-23 04:50:27,016 | INFO     | pid: 3360228
[2025-07-22 21:51:00] 2025-07-23 04:50:27,016 | INFO     | pgrp: 3360228
[2025-07-22 21:51:00] 2025-07-23 04:50:27,016 | INFO     | corecount: 12
[2025-07-22 21:51:00] 2025-07-23 04:50:27,016 | INFO     | event service: False
[2025-07-22 21:51:00] 2025-07-23 04:50:27,017 | INFO     | sizes: {0: 2397268, 1: 2397523, 2: 2397523, 12: 2397551, 17: 2397841, 23: 2397869, 64: 2421262, 67: 2425554, 68: 2425582, 198: 2425748}
[2025-07-22 21:51:00] 2025-07-23 04:50:27,017 | INFO     | --------------------------------------------------
[2025-07-22 21:51:00] 2025-07-23 04:50:27,017 | INFO     | 
[2025-07-22 21:51:00] 2025-07-23 04:50:27,017 | INFO     | executing command: ls -lF /home/boinc/slots/0
[2025-07-22 21:51:00] 2025-07-23 04:50:27,059 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-22 21:51:00] 2025-07-23 04:50:27,059 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-22 21:51:00] 2025-07-23 04:50:27,059 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-22 21:51:00] 2025-07-23 04:50:27,060 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-22 21:51:00] 2025-07-23 04:50:27,060 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-22 21:51:00] 2025-07-23 04:50:27,060 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-22 21:51:00] 2025-07-23 04:50:27,060 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-22 21:51:00] 2025-07-23 04:50:27,060 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-22 21:51:00] 2025-07-23 04:50:27,060 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-22 21:51:00] 2025-07-23 04:50:27,060 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-22 21:51:00] 2025-07-23 04:50:27,060 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-22 21:51:00] 2025-07-23 04:50:27,060 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-22 21:51:00] 2025-07-23 04:50:27,060 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-22 21:51:00] 2025-07-23 04:50:27,060 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-22 21:51:00] 2025-07-23 04:50:27,060 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-22 21:51:00] 2025-07-23 04:50:27,060 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-22 21:51:00] 2025-07-23 04:50:27,060 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-22 21:51:00] 2025-07-23 04:50:27,060 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-22 21:51:00] 2025-07-23 04:50:27,060 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-22 21:51:00] 2025-07-23 04:50:27,060 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-22 21:51:00] 2025-07-23 04:50:27,060 | INFO     | job 6741871171 has completed (purged errors)
[2025-07-22 21:51:00] 2025-07-23 04:50:27,061 | INFO     | overall cleanup function is called
[2025-07-22 21:51:00] 2025-07-23 04:50:28,067 | INFO     | --- collectZombieJob: --- 10, [3360228]
[2025-07-22 21:51:00] 2025-07-23 04:50:28,067 | INFO     | zombie collector waiting for pid 3360228
[2025-07-22 21:51:00] 2025-07-23 04:50:28,067 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-22 21:51:00] 2025-07-23 04:50:28,067 | INFO     | collected zombie processes
[2025-07-22 21:51:00] 2025-07-23 04:50:28,067 | INFO     | will attempt to kill all subprocesses of pid=3360228
[2025-07-22 21:51:00] 2025-07-23 04:50:29,142 | INFO     | process IDs to be killed: [3360228] (in reverse order)
[2025-07-22 21:51:00] 2025-07-23 04:50:29,623 | WARNING  | found no corresponding commands to process id(s)
[2025-07-22 21:51:00] 2025-07-23 04:50:29,624 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-22 21:51:00] 2025-07-23 04:50:29,672 | INFO     | did not find any defunct processes belonging to 3360228
[2025-07-22 21:51:00] 2025-07-23 04:50:29,679 | INFO     | did not find any defunct processes belonging to 3360228
[2025-07-22 21:51:00] 2025-07-23 04:50:29,680 | INFO     | ready for new job
[2025-07-22 21:51:00] 2025-07-23 04:50:29,680 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-22 21:51:00] 2025-07-23 04:50:29,681 | INFO     | ***************************************
[2025-07-22 21:51:00] 2025-07-23 04:50:29,681 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-22 21:51:00] 2025-07-23 04:50:29,681 | INFO     | ***************************************
[2025-07-22 21:51:00] 2025-07-23 04:50:29,681 | INFO     | 
[2025-07-22 21:51:00] 2025-07-23 04:50:29,683 | INFO     | architecture information:
[2025-07-22 21:51:00] 2025-07-23 04:50:29,683 | INFO     | executing command: cat /etc/os-release
[2025-07-22 21:51:00] 2025-07-23 04:50:29,735 | INFO     | cat /etc/os-release:
[2025-07-22 21:51:00] NAME="CentOS Linux"
[2025-07-22 21:51:00] VERSION="7 (Core)"
[2025-07-22 21:51:00] ID="centos"
[2025-07-22 21:51:00] ID_LIKE="rhel fedora"
[2025-07-22 21:51:00] VERSION_ID="7"
[2025-07-22 21:51:00] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-22 21:51:00] ANSI_COLOR="0;31"
[2025-07-22 21:51:00] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-22 21:51:00] HOME_URL="https://www.centos.org/"
[2025-07-22 21:51:00] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-22 21:51:00] 
[2025-07-22 21:51:00] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-22 21:51:00] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-22 21:51:00] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-22 21:51:00] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-22 21:51:00] 
[2025-07-22 21:51:00] 2025-07-23 04:50:29,735 | INFO     | ***************************************
[2025-07-22 21:51:00] 2025-07-23 04:50:30,249 | INFO     | executing command: df -mP /home/boinc/slots/0
[2025-07-22 21:51:00] 2025-07-23 04:50:30,292 | INFO     | sufficient remaining disk space (2105036242944 B)
[2025-07-22 21:51:00] 2025-07-23 04:50:30,293 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-22 21:51:00] 2025-07-23 04:50:30,293 | INFO     | current server update state: UPDATING_FINAL
[2025-07-22 21:51:00] 2025-07-23 04:50:30,293 | INFO     | update_server=False
[2025-07-22 21:51:00] 2025-07-23 04:50:30,293 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-22 21:51:00] 2025-07-23 04:50:30,294 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-22 21:51:00] 2025-07-23 04:50:30,298 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-22 21:51:00] 2025-07-23 04:50:30,643 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-07-22 21:51:00] 2025-07-23 04:50:30,643 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-07-22 21:51:00] 2025-07-23 04:50:30,643 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-22 21:51:00] 2025-07-23 04:50:30,643 | INFO     | will abort loop
[2025-07-22 21:51:00] 2025-07-23 04:50:31,041 | INFO     | all data control threads have been joined
[2025-07-22 21:51:00] 2025-07-23 04:50:31,299 | INFO     | [job] retrieve thread has finished
[2025-07-22 21:51:00] 2025-07-23 04:50:31,338 | INFO     | all job control threads have been joined
[2025-07-22 21:51:00] 2025-07-23 04:50:31,352 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-22 21:51:00] 2025-07-23 04:50:31,541 | INFO     | all payload control threads have been joined
[2025-07-22 21:51:00] 2025-07-23 04:50:31,608 | INFO     | [payload] failed_post thread has finished
[2025-07-22 21:51:00] 2025-07-23 04:50:31,649 | INFO     | [job] job monitor thread has finished
[2025-07-22 21:51:00] 2025-07-23 04:50:32,030 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-22 21:51:00] 2025-07-23 04:50:32,044 | INFO     | [data] copytool_in thread has finished
[2025-07-22 21:51:00] 2025-07-23 04:50:32,044 | INFO     | [job] validate thread has finished
[2025-07-22 21:51:00] 2025-07-23 04:50:32,047 | INFO     | [data] control thread has finished
[2025-07-22 21:51:00] 2025-07-23 04:50:32,315 | INFO     | [data] copytool_out thread has finished
[2025-07-22 21:51:00] 2025-07-23 04:50:32,318 | INFO     | [payload] validate_post thread has finished
[2025-07-22 21:51:00] 2025-07-23 04:50:32,344 | INFO     | [job] control thread has finished
[2025-07-22 21:51:00] 2025-07-23 04:50:32,547 | INFO     | [payload] control thread has finished
[2025-07-22 21:51:00] 2025-07-23 04:50:32,591 | INFO     | [payload] validate_pre thread has finished
[2025-07-22 21:51:00] 2025-07-23 04:50:32,606 | INFO     | [payload] execute_payloads thread has finished
[2025-07-22 21:51:00] 2025-07-23 04:50:32,690 | INFO     | [job] create_data_payload thread has finished
[2025-07-22 21:51:00] 2025-07-23 04:50:33,036 | INFO     | [job] queue monitor thread has finished
[2025-07-22 21:51:00] 2025-07-23 04:50:34,307 | INFO     | [data] queue_monitor thread has finished
[2025-07-22 21:51:00] 2025-07-23 04:50:36,057 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140639062460224)>', '<ExcThread(monitor, started 140638662141696)>']
[2025-07-22 21:51:00] 2025-07-23 04:50:41,088 | INFO     | all workflow threads have been joined
[2025-07-22 21:51:00] 2025-07-23 04:50:41,088 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-22 21:51:00] 2025-07-23 04:50:41,088 | INFO     | traces error code: 0
[2025-07-22 21:51:00] 2025-07-23 04:50:41,088 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-22 21:51:00] 2025-07-23 04:50:59,480 | INFO     | PID=3353577 has CPU usage=1.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-07-22 21:51:00] 2025-07-23 04:50:59,480 | INFO     | .. there are 28 such processes running
[2025-07-22 21:51:00] 2025-07-23 04:50:59,481 | INFO     | found 0 job(s) in 20 queues
[2025-07-22 21:51:00] 2025-07-23 04:50:59,481 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-22 21:51:00] 2025-07-23 04:50:59,481 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-22 21:51:00] 2025-07-23 04:50:59,481 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-22 21:51:00] 2025-07-23 04:50:59,481 | CRITICAL | thread 'MainThread' is not alive
[2025-07-22 21:51:00] 2025-07-23 04:50:59,481 | INFO     | [monitor] control thread has ended
[2025-07-22 21:51:00] 2025-07-23 04:50:59,617 [wrapper] ==== pilot stdout END ====
[2025-07-22 21:51:00] 2025-07-23 04:50:59,633 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-22 21:51:00] 2025-07-23 04:50:59,637 [wrapper] pilotpid: 3353577
[2025-07-22 21:51:00] 2025-07-23 04:50:59,647 [wrapper] Pilot exit status: 0
[2025-07-22 21:51:00] 2025-07-23 04:50:59,707 [wrapper] pandaids: 6741871171
[2025-07-22 21:51:00] 2025-07-23 04:50:59,777 [wrapper] cleanup supervisor_pilot 3353583 3353578
[2025-07-22 21:51:00] 2025-07-23 04:50:59,780 [wrapper] Test setup, not cleaning
[2025-07-22 21:51:00] 2025-07-23 04:50:59,782 [wrapper] apfmon messages muted
[2025-07-22 21:51:00] 2025-07-23 04:50:59,784 [wrapper] ==== wrapper stdout END ====
[2025-07-22 21:51:00] 2025-07-23 04:50:59,786 [wrapper] ==== wrapper stderr END ====
[2025-07-22 21:51:00]  *** Error codes and diagnostics ***
[2025-07-22 21:51:00]     "exeErrorCode": 65,
[2025-07-22 21:51:00]     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (1)",
[2025-07-22 21:51:00]     "pilotErrorCode": 1305,
[2025-07-22 21:51:00]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (1)",
[2025-07-22 21:51:00]  *** Listing of results directory ***
[2025-07-22 21:51:00] total 342372
[2025-07-22 21:51:00] -rw-r--r--. 1 boinc boinc    530466 Jul 22 17:24 pilot3.tar.gz
[2025-07-22 21:51:00] -rw-r--r--. 1 boinc boinc      5112 Jul 22 18:01 queuedata.json
[2025-07-22 21:51:00] -rwx------. 1 boinc boinc     36292 Jul 22 18:04 runpilot2-wrapper.sh
[2025-07-22 21:51:00] -rw-r--r--. 1 boinc boinc       100 Jul 22 21:46 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-22 21:51:00] -rwxr-xr-x. 1 boinc boinc      7986 Jul 22 21:46 run_atlas
[2025-07-22 21:51:00] -rw-r--r--. 1 boinc boinc       105 Jul 22 21:46 job.xml
[2025-07-22 21:51:00] -rw-r--r--. 2 boinc boinc 346537128 Jul 22 21:46 EVNT.45697488._000161.pool.root.1
[2025-07-22 21:51:00] drwxrwx--x. 2 boinc boinc      4096 Jul 22 21:46 shared
[2025-07-22 21:51:00] -rw-r--r--. 2 boinc boinc    542901 Jul 22 21:46 input.tar.gz
[2025-07-22 21:51:00] -rw-r--r--. 1 boinc boinc      6597 Jul 22 21:46 init_data.xml
[2025-07-22 21:51:00] -rw-r--r--. 2 boinc boinc     15095 Jul 22 21:46 start_atlas.sh
[2025-07-22 21:51:00] -rw-r--r--. 1 boinc boinc         0 Jul 22 21:46 boinc_lockfile
[2025-07-22 21:51:00] -rw-r--r--. 1 boinc boinc      2587 Jul 22 21:46 pandaJob.out
[2025-07-22 21:51:00] -rw-------. 1 boinc boinc    977736 Jul 22 21:46 agis_schedconf.cvmfs.json
[2025-07-22 21:51:00] -rw-------. 1 boinc boinc   1593031 Jul 22 21:46 agis_ddmendpoints.agis.ALL.json
[2025-07-22 21:51:00] drwx------. 4 boinc boinc      4096 Jul 22 21:46 pilot3
[2025-07-22 21:51:00] -rw-------. 1 boinc boinc       947 Jul 22 21:48 memory_monitor_summary.json
[2025-07-22 21:51:00] -rw-r--r--. 1 boinc boinc       523 Jul 22 21:48 boinc_task_state.xml
[2025-07-22 21:51:00] -rw-------. 1 boinc boinc     21667 Jul 22 21:48 log.45697490._003576.job.log.tgz.1
[2025-07-22 21:51:00] -rw-------. 1 boinc boinc      8384 Jul 22 21:50 heartbeat.json
[2025-07-22 21:51:00] -rw-r--r--. 1 boinc boinc      8192 Jul 22 21:50 boinc_mmap_file
[2025-07-22 21:51:00] -rw-r--r--. 1 boinc boinc        22 Jul 22 21:50 wrapper_checkpoint.txt
[2025-07-22 21:51:00] -rw-------. 1 boinc boinc        95 Jul 22 21:50 pilot_heartbeat.json
[2025-07-22 21:51:00] -rw-------. 1 boinc boinc       893 Jul 22 21:50 pilotlog.txt
[2025-07-22 21:51:00] -rw-------. 1 boinc boinc     80799 Jul 22 21:50 log.45697490._003576.job.log.1
[2025-07-22 21:51:00] -rw-------. 1 boinc boinc       188 Jul 22 21:51 output.list
[2025-07-22 21:51:00] -rw-r--r--. 1 boinc boinc       620 Jul 22 21:51 runtime_log
[2025-07-22 21:51:00] -rw-------. 1 boinc boinc    122880 Jul 22 21:51 result.tar.gz
[2025-07-22 21:51:00] -rw-r--r--. 1 boinc boinc      8485 Jul 22 21:51 runtime_log.err
[2025-07-22 21:51:00] -rw-------. 1 boinc boinc       644 Jul 22 21:51 iaFODm74cy7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmCaKLDmcbupvm.diag
[2025-07-22 21:51:00] -rw-r--r--. 1 boinc boinc      2143 Jul 22 21:51 stderr.txt
[2025-07-22 21:51:00] No HITS result produced
[2025-07-22 21:51:00]  *** Contents of shared directory: ***
[2025-07-22 21:51:00] total 339084
[2025-07-22 21:51:00] -rw-r--r--. 2 boinc boinc 346537128 Jul 22 21:46 ATLAS.root_0
[2025-07-22 21:51:00] -rw-r--r--. 2 boinc boinc    542901 Jul 22 21:46 input.tar.gz
[2025-07-22 21:51:00] -rw-r--r--. 2 boinc boinc     15095 Jul 22 21:46 start_atlas.sh
[2025-07-22 21:51:00] -rw-------. 1 boinc boinc    122880 Jul 22 21:51 result.tar.gz
21:51:01 (3349998): run_atlas exited; CPU time 24.743523
21:51:01 (3349998): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN