Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
11:53:40 (4599): wrapper (7.7.26015): starting
11:53:40 (4599): wrapper: running run_atlas (--nthreads 8)
[2025-07-23 11:53:40] Arguments: --nthreads 8
[2025-07-23 11:53:40] Threads: 8
[2025-07-23 11:53:40] Checking for CVMFS
[2025-07-23 11:53:41] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-23 11:53:41] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-23 11:53:41] Running cvmfs_config stat atlas.cern.ch
[2025-07-23 11:53:42] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-23 11:53:42] 2.11.2.0 3973 103755 141040 148653 0 247 23080971 25165825 2826 130560 0 85506820 99.859 53273750 4286 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-07-23 11:53:42] CVMFS is ok
[2025-07-23 11:53:42] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-23 11:53:42] Checking for apptainer binary...
[2025-07-23 11:53:42] Using apptainer found in PATH at /usr/bin/apptainer
[2025-07-23 11:53:42] Running /usr/bin/apptainer --version
[2025-07-23 11:53:42] apptainer version 1.3.2-1.el7
[2025-07-23 11:53:42] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-23 12:14:22] cg-vwn471.simple-grid.lan
[2025-07-23 12:14:22] apptainer works
[2025-07-23 12:14:22] Set ATHENA_PROC_NUMBER=8
[2025-07-23 12:14:22] Set ATHENA_CORE_NUMBER=8
[2025-07-23 12:14:22] Starting ATLAS job with PandaID=6742556470
[2025-07-23 12:14:22] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/14 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-23 21:25:19]  *** The last 200 lines of the pilot log: ***
[2025-07-23 21:25:19] 2025-07-23 16:05:23,169 | INFO     | fitting pss+swap vs Time
[2025-07-23 21:25:19] 2025-07-23 16:05:23,169 | INFO     | sum of square deviations: 12295263090.0
[2025-07-23 21:25:19] 2025-07-23 16:05:23,173 | INFO     | sum of deviations: -55997553357.999985
[2025-07-23 21:25:19] 2025-07-23 16:05:23,173 | INFO     | mean x: 1753276215.0
[2025-07-23 21:25:19] 2025-07-23 16:05:23,173 | INFO     | mean y: 2583151.0234604105
[2025-07-23 21:25:19] 2025-07-23 16:05:23,174 | INFO     | -- intersect: 7987705362.895932
[2025-07-23 21:25:19] 2025-07-23 16:05:23,174 | INFO     | intersect: 7987705362.895932
[2025-07-23 21:25:19] 2025-07-23 16:05:23,174 | INFO     | chi2: 2.5333834156212456
[2025-07-23 21:25:19] 2025-07-23 16:05:23,175 | INFO     | sum of square deviations: 11762304260.0
[2025-07-23 21:25:19] 2025-07-23 16:05:23,194 | INFO     | sum of deviations: -32002954569.500008
[2025-07-23 21:25:19] 2025-07-23 16:05:23,195 | INFO     | mean x: 1753276062.5
[2025-07-23 21:25:19] 2025-07-23 16:05:23,195 | INFO     | mean y: 2589937.931547619
[2025-07-23 21:25:19] 2025-07-23 16:05:23,195 | INFO     | -- intersect: 4772914947.019465
[2025-07-23 21:25:19] 2025-07-23 16:05:23,195 | INFO     | intersect: 4772914947.019465
[2025-07-23 21:25:19] 2025-07-23 16:05:23,195 | INFO     | chi2: 1.7687405027401413
[2025-07-23 21:25:19] 2025-07-23 16:05:23,195 | INFO     | current chi2=1.7687405027401413 (change=30.182676185775687 %)
[2025-07-23 21:25:19] 2025-07-23 16:05:23,196 | INFO     | sum of square deviations: 11244973630.0
[2025-07-23 21:25:19] 2025-07-23 16:05:23,199 | INFO     | sum of deviations: -31567152604.999996
[2025-07-23 21:25:19] 2025-07-23 16:05:23,199 | INFO     | mean x: 1753275910.0
[2025-07-23 21:25:19] 2025-07-23 16:05:23,200 | INFO     | mean y: 2590066.4380664653
[2025-07-23 21:25:19] 2025-07-23 16:05:23,200 | INFO     | -- intersect: 4924427149.451327
[2025-07-23 21:25:19] 2025-07-23 16:05:23,200 | INFO     | intersect: 4924427149.451327
[2025-07-23 21:25:19] 2025-07-23 16:05:23,200 | INFO     | chi2: 1.7677112205388785
[2025-07-23 21:25:19] 2025-07-23 16:05:23,200 | INFO     | current chi2=1.7677112205388785 (change=0.0581929457525386 %)
[2025-07-23 21:25:19] 2025-07-23 16:05:23,201 | INFO     | right removable region: 330
[2025-07-23 21:25:19] 2025-07-23 16:05:23,201 | INFO     | sum of square deviations: 11762304260.0
[2025-07-23 21:25:19] 2025-07-23 16:05:23,212 | INFO     | sum of deviations: -111462519253.99997
[2025-07-23 21:25:19] 2025-07-23 16:05:23,213 | INFO     | mean x: 1753276367.5
[2025-07-23 21:25:19] 2025-07-23 16:05:23,213 | INFO     | mean y: 2598919.4583333335
[2025-07-23 21:25:19] 2025-07-23 16:05:23,213 | INFO     | -- intersect: 16617081639.024702
[2025-07-23 21:25:19] 2025-07-23 16:05:23,213 | INFO     | intersect: 16617081639.024702
[2025-07-23 21:25:19] 2025-07-23 16:05:23,214 | INFO     | chi2: 1.038446750329171
[2025-07-23 21:25:19] 2025-07-23 16:05:23,214 | INFO     | current chi2=1.038446750329171 (change=59.0094912627144 %)
[2025-07-23 21:25:19] 2025-07-23 16:05:23,214 | INFO     | sum of square deviations: 11244973630.0
[2025-07-23 21:25:19] 2025-07-23 16:05:23,218 | INFO     | sum of deviations: -108023434596.99997
[2025-07-23 21:25:19] 2025-07-23 16:05:23,218 | INFO     | mean x: 1753276520.0
[2025-07-23 21:25:19] 2025-07-23 16:05:23,218 | INFO     | mean y: 2597893.0453172205
[2025-07-23 21:25:19] 2025-07-23 16:05:23,218 | INFO     | -- intersect: 16845229785.342222
[2025-07-23 21:25:19] 2025-07-23 16:05:23,219 | INFO     | intersect: 16845229785.342222
[2025-07-23 21:25:19] 2025-07-23 16:05:23,219 | INFO     | chi2: 1.0272502750903596
[2025-07-23 21:25:19] 2025-07-23 16:05:23,219 | INFO     | current chi2=1.0272502750903596 (change=1.0781944510166068 %)
[2025-07-23 21:25:19] 2025-07-23 16:05:23,219 | INFO     | left removable region: 20
[2025-07-23 21:25:19] 2025-07-23 16:05:23,220 | INFO     | sum of square deviations: 9237596457.5
[2025-07-23 21:25:19] 2025-07-23 16:05:23,223 | INFO     | sum of deviations: -63687284728.0
[2025-07-23 21:25:19] 2025-07-23 16:05:23,223 | INFO     | mean x: 1753276489.5
[2025-07-23 21:25:19] 2025-07-23 16:05:23,223 | INFO     | mean y: 2599308.1032258063
[2025-07-23 21:25:19] 2025-07-23 16:05:23,223 | INFO     | -- intersect: 12090312763.375128
[2025-07-23 21:25:19] 2025-07-23 16:05:23,223 | INFO     | intersect: 12090312763.375128
[2025-07-23 21:25:19] 2025-07-23 16:05:23,224 | INFO     | chi2: 0.22306624795467578
[2025-07-23 21:25:19] 2025-07-23 16:05:23,224 | INFO     | -- intersect: 12090312763.375128
[2025-07-23 21:25:19] 2025-07-23 16:05:23,224 | INFO     | current memory leak: -6.89 B/s (using 310 data points, chi2=0.22)
[2025-07-23 21:25:19] 2025-07-23 16:05:23,225 | INFO     | could have reported an average CPU frequency of 2249 MHz (14 samples)
[2025-07-23 21:25:19] 2025-07-23 16:05:23,225 | INFO     | ..............................
[2025-07-23 21:25:19] 2025-07-23 16:05:23,225 | INFO     | . Timing measurements:
[2025-07-23 21:25:19] 2025-07-23 16:05:23,225 | INFO     | . get job = 0 s
[2025-07-23 21:25:19] 2025-07-23 16:05:23,225 | INFO     | . initial setup = 2 s
[2025-07-23 21:25:19] 2025-07-23 16:05:23,225 | INFO     | . payload setup = 11 s
[2025-07-23 21:25:19] 2025-07-23 16:05:23,225 | INFO     | . stage-in = 0 s
[2025-07-23 21:25:19] 2025-07-23 16:05:23,225 | INFO     | . payload execution = 20790 s
[2025-07-23 21:25:19] 2025-07-23 16:05:23,225 | INFO     | . stage-out = 3 s
[2025-07-23 21:25:19] 2025-07-23 16:05:23,225 | INFO     | . log creation = 1 s
[2025-07-23 21:25:19] 2025-07-23 16:05:23,226 | INFO     | ..............................
[2025-07-23 21:25:19] 2025-07-23 16:05:23,476 | INFO     | 
[2025-07-23 21:25:19] 2025-07-23 16:05:23,476 | INFO     | job summary report
[2025-07-23 21:25:19] 2025-07-23 16:05:23,476 | INFO     | --------------------------------------------------
[2025-07-23 21:25:19] 2025-07-23 16:05:23,476 | INFO     | PanDA job id: 6742556470
[2025-07-23 21:25:19] 2025-07-23 16:05:23,476 | INFO     | task id: 45697541
[2025-07-23 21:25:19] 2025-07-23 16:05:23,476 | INFO     | errors: (none)
[2025-07-23 21:25:19] 2025-07-23 16:05:23,476 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-23 21:25:19] 2025-07-23 16:05:23,477 | INFO     | pilot state: finished 
[2025-07-23 21:25:19] 2025-07-23 16:05:23,477 | INFO     | transexitcode: 0
[2025-07-23 21:25:19] 2025-07-23 16:05:23,477 | INFO     | exeerrorcode: 0
[2025-07-23 21:25:19] 2025-07-23 16:05:23,477 | INFO     | exeerrordiag: 
[2025-07-23 21:25:19] 2025-07-23 16:05:23,477 | INFO     | exitcode: 0
[2025-07-23 21:25:19] 2025-07-23 16:05:23,477 | INFO     | exitmsg: OK
[2025-07-23 21:25:19] 2025-07-23 16:05:23,477 | INFO     | cpuconsumptiontime: 80018 s
[2025-07-23 21:25:19] 2025-07-23 16:05:23,477 | INFO     | nevents: 400
[2025-07-23 21:25:19] 2025-07-23 16:05:23,477 | INFO     | neventsw: 0
[2025-07-23 21:25:19] 2025-07-23 16:05:23,478 | INFO     | pid: 15480
[2025-07-23 21:25:19] 2025-07-23 16:05:23,478 | INFO     | pgrp: 15480
[2025-07-23 21:25:19] 2025-07-23 16:05:23,478 | INFO     | corecount: 8
[2025-07-23 21:25:19] 2025-07-23 16:05:23,478 | INFO     | event service: False
[2025-07-23 21:25:19] 2025-07-23 16:05:23,478 | INFO     | sizes: {0: 2397338, 1: 2397537, 8: 2397799, 11: 2397827, 20805: 2430999, 20806: 2430998, 20811: 2440182, 20814: 2440238, 20909: 2440432}
[2025-07-23 21:25:19] 2025-07-23 16:05:23,478 | INFO     | --------------------------------------------------
[2025-07-23 21:25:19] 2025-07-23 16:05:23,478 | INFO     | 
[2025-07-23 21:25:19] 2025-07-23 16:05:23,478 | INFO     | executing command: ls -lF /var/lib/boinc/slots/14
[2025-07-23 21:25:19] 2025-07-23 16:05:24,004 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-23 21:25:19] 2025-07-23 16:05:24,005 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-23 21:25:19] 2025-07-23 16:05:24,005 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-23 21:25:19] 2025-07-23 16:05:24,005 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-23 21:25:19] 2025-07-23 16:05:24,005 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-23 21:25:19] 2025-07-23 16:05:24,005 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-23 21:25:19] 2025-07-23 16:05:24,005 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-23 21:25:19] 2025-07-23 16:05:24,005 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-23 21:25:19] 2025-07-23 16:05:24,005 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-23 21:25:19] 2025-07-23 16:05:24,005 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-23 21:25:19] 2025-07-23 16:05:24,006 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-23 21:25:19] 2025-07-23 16:05:24,006 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-23 21:25:19] 2025-07-23 16:05:24,006 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-23 21:25:19] 2025-07-23 16:05:24,006 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-23 21:25:19] 2025-07-23 16:05:24,006 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-23 21:25:19] 2025-07-23 16:05:24,006 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-23 21:25:19] 2025-07-23 16:05:24,006 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-23 21:25:19] 2025-07-23 16:05:24,006 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-23 21:25:19] 2025-07-23 16:05:24,006 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-23 21:25:19] 2025-07-23 16:05:24,006 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-23 21:25:19] 2025-07-23 16:05:24,007 | INFO     | job 6742556470 has completed (purged errors)
[2025-07-23 21:25:19] 2025-07-23 16:05:24,007 | INFO     | overall cleanup function is called
[2025-07-23 21:25:19] 2025-07-23 16:05:25,016 | INFO     | --- collectZombieJob: --- 10, [15480]
[2025-07-23 21:25:19] 2025-07-23 16:05:25,016 | INFO     | zombie collector waiting for pid 15480
[2025-07-23 21:25:19] 2025-07-23 16:05:25,016 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-23 21:25:19] 2025-07-23 16:05:25,016 | INFO     | collected zombie processes
[2025-07-23 21:25:19] 2025-07-23 16:05:25,016 | INFO     | will attempt to kill all subprocesses of pid=15480
[2025-07-23 21:25:19] 2025-07-23 16:05:25,155 | INFO     | process IDs to be killed: [15480] (in reverse order)
[2025-07-23 21:25:19] 2025-07-23 16:05:26,182 | WARNING  | found no corresponding commands to process id(s)
[2025-07-23 21:25:19] 2025-07-23 16:05:26,183 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-23 21:25:19] 2025-07-23 16:05:26,186 | INFO     | did not find any defunct processes belonging to 15480
[2025-07-23 21:25:19] 2025-07-23 16:05:26,189 | INFO     | did not find any defunct processes belonging to 15480
[2025-07-23 21:25:19] 2025-07-23 16:05:26,190 | INFO     | ready for new job
[2025-07-23 21:25:19] 2025-07-23 16:05:26,190 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-23 21:25:19] 2025-07-23 16:05:26,192 | INFO     | ***************************************
[2025-07-23 21:25:19] 2025-07-23 16:05:26,192 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-23 21:25:19] 2025-07-23 16:05:26,192 | INFO     | ***************************************
[2025-07-23 21:25:19] 2025-07-23 16:05:26,192 | INFO     | 
[2025-07-23 21:25:19] 2025-07-23 16:05:26,193 | INFO     | pilot is running in a VM
[2025-07-23 21:25:19] 2025-07-23 16:05:26,193 | INFO     | architecture information:
[2025-07-23 21:25:19] 2025-07-23 16:05:26,195 | INFO     | executing command: cat /etc/os-release
[2025-07-23 21:25:19] 2025-07-23 16:05:26,391 | INFO     | cat /etc/os-release:
[2025-07-23 21:25:19] NAME="CentOS Linux"
[2025-07-23 21:25:19] VERSION="7 (Core)"
[2025-07-23 21:25:19] ID="centos"
[2025-07-23 21:25:19] ID_LIKE="rhel fedora"
[2025-07-23 21:25:19] VERSION_ID="7"
[2025-07-23 21:25:19] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-23 21:25:19] ANSI_COLOR="0;31"
[2025-07-23 21:25:19] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-23 21:25:19] HOME_URL="https://www.centos.org/"
[2025-07-23 21:25:19] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-23 21:25:19] 
[2025-07-23 21:25:19] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-23 21:25:19] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-23 21:25:19] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-23 21:25:19] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-23 21:25:19] 
[2025-07-23 21:25:19] 2025-07-23 16:05:26,391 | INFO     | ***************************************
[2025-07-23 21:25:19] 2025-07-23 16:05:26,898 | INFO     | executing command: df -mP /var/lib/boinc/slots/14
[2025-07-23 21:25:19] 2025-07-23 16:05:27,130 | INFO     | sufficient remaining disk space (496629710848 B)
[2025-07-23 21:25:19] 2025-07-23 16:05:27,131 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-23 21:25:19] 2025-07-23 16:05:27,131 | INFO     | current server update state: UPDATING_FINAL
[2025-07-23 21:25:19] 2025-07-23 16:05:27,131 | INFO     | update_server=False
[2025-07-23 21:25:19] 2025-07-23 16:05:27,131 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-23 21:25:19] 2025-07-23 16:05:27,365 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-07-23 21:25:19] 2025-07-23 16:05:27,365 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-07-23 21:25:19] 2025-07-23 16:05:27,365 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-23 21:25:19] 2025-07-23 16:05:27,365 | INFO     | will abort loop
[2025-07-23 21:25:19] 2025-07-23 16:05:27,507 | INFO     | all data control threads have been joined
[2025-07-23 21:25:19] 2025-07-23 16:05:28,137 | INFO     | [job] retrieve thread has finished
[2025-07-23 21:25:19] 2025-07-23 16:05:28,255 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-23 21:25:19] 2025-07-23 16:05:28,360 | INFO     | all payload control threads have been joined
[2025-07-23 21:25:19] 2025-07-23 16:05:28,371 | INFO     | [job] job monitor thread has finished
[2025-07-23 21:25:19] 2025-07-23 16:05:28,417 | INFO     | [payload] validate_pre thread has finished
[2025-07-23 21:25:19] 2025-07-23 16:05:28,420 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-23 21:25:19] 2025-07-23 16:05:28,444 | INFO     | [job] validate thread has finished
[2025-07-23 21:25:19] 2025-07-23 16:05:28,513 | INFO     | [data] control thread has finished
[2025-07-23 21:25:19] 2025-07-23 16:05:28,609 | INFO     | all job control threads have been joined
[2025-07-23 21:25:19] 2025-07-23 16:05:28,766 | INFO     | [payload] validate_post thread has finished
[2025-07-23 21:25:19] 2025-07-23 16:05:28,771 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-23 21:25:19] 2025-07-23 16:05:29,223 | INFO     | [payload] execute_payloads thread has finished
[2025-07-23 21:25:19] 2025-07-23 16:05:29,311 | INFO     | [job] create_data_payload thread has finished
[2025-07-23 21:25:19] 2025-07-23 16:05:29,354 | INFO     | [payload] failed_post thread has finished
[2025-07-23 21:25:19] 2025-07-23 16:05:29,366 | INFO     | [payload] control thread has finished
[2025-07-23 21:25:19] 2025-07-23 16:05:29,405 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-23 21:25:19] 2025-07-23 16:05:29,426 | INFO     | [job] queue monitor thread has finished
[2025-07-23 21:25:19] 2025-07-23 16:05:29,611 | INFO     | [data] copytool_in thread has finished
[2025-07-23 21:25:19] 2025-07-23 16:05:29,616 | INFO     | [job] control thread has finished
[2025-07-23 21:25:19] 2025-07-23 16:05:30,262 | INFO     | [data] copytool_out thread has finished
[2025-07-23 21:25:19] 2025-07-23 16:05:32,780 | INFO     | [data] queue_monitor thread has finished
[2025-07-23 21:25:19] 2025-07-23 16:05:34,311 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140588305884992)>', '<ExcThread(monitor, started 140587567150848)>']
[2025-07-23 21:25:19] 2025-07-23 16:05:39,337 | INFO     | all workflow threads have been joined
[2025-07-23 21:25:19] 2025-07-23 16:05:39,337 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-23 21:25:19] 2025-07-23 16:05:39,337 | INFO     | traces error code: 0
[2025-07-23 21:25:19] 2025-07-23 16:05:39,337 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-23 21:25:19] 2025-07-23 16:05:56,103 | INFO     | PID=8898 has CPU usage=1.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2025-07-23 21:25:19] 2025-07-23 16:05:56,103 | INFO     | .. there are 9 such processes running
[2025-07-23 21:25:19] 2025-07-23 16:05:56,105 | INFO     | found 0 job(s) in 20 queues
[2025-07-23 21:25:19] 2025-07-23 16:05:56,105 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-23 21:25:19] 2025-07-23 16:05:56,105 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-23 21:25:19] 2025-07-23 16:05:56,105 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-23 21:25:19] 2025-07-23 16:05:56,106 | CRITICAL | thread 'MainThread' is not alive
[2025-07-23 21:25:19] 2025-07-23 16:05:56,106 | INFO     | [monitor] control thread has ended
[2025-07-23 21:25:19] 2025-07-23 16:05:56,356 [wrapper] ==== pilot stdout END ====
[2025-07-23 21:25:19] 2025-07-23 16:05:56,423 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-23 21:25:19] 2025-07-23 16:05:56,469 [wrapper] pilotpid: 8898
[2025-07-23 21:25:19] 2025-07-23 16:05:56,513 [wrapper] Pilot exit status: 0
[2025-07-23 21:25:19] 2025-07-23 16:05:56,813 [wrapper] pandaids: 6742556470
[2025-07-23 21:25:19] 2025-07-23 16:05:57,067 [wrapper] cleanup supervisor_pilot 31863 8899
[2025-07-23 21:25:19] 2025-07-23 16:05:57,082 [wrapper] Test setup, not cleaning
[2025-07-23 21:25:19] 2025-07-23 16:05:57,145 [wrapper] apfmon messages muted
[2025-07-23 21:25:19] 2025-07-23 16:05:57,225 [wrapper] ==== wrapper stdout END ====
[2025-07-23 21:25:19] 2025-07-23 16:05:57,290 [wrapper] ==== wrapper stderr END ====
[2025-07-23 21:25:19]  *** Error codes and diagnostics ***
[2025-07-23 21:25:19]     "exeErrorCode": 0,
[2025-07-23 21:25:19]     "exeErrorDiag": "",
[2025-07-23 21:25:19]     "pilotErrorCode": 0,
[2025-07-23 21:25:19]     "pilotErrorDiag": "",
[2025-07-23 21:25:19]  *** Listing of results directory ***
[2025-07-23 21:25:19] total 646932
[2025-07-23 21:25:19] -rw-r--r--. 1 boinc boinc    530466 Jul 22 22:12 pilot3.tar.gz
[2025-07-23 21:25:19] -rw-r--r--. 1 boinc boinc      5112 Jul 22 22:43 queuedata.json
[2025-07-23 21:25:19] -rwx------. 1 boinc boinc     36292 Jul 22 22:44 runpilot2-wrapper.sh
[2025-07-23 21:25:19] -rw-r--r--. 1 boinc boinc       100 Jul 23 11:53 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-23 21:25:19] -rwxr-xr-x. 1 boinc boinc      7986 Jul 23 11:53 run_atlas
[2025-07-23 21:25:19] -rw-r--r--. 1 boinc boinc       105 Jul 23 11:53 job.xml
[2025-07-23 21:25:19] -rw-r--r--. 2 boinc boinc 344113749 Jul 23 11:53 EVNT.45697539._000131.pool.root.1
[2025-07-23 21:25:19] -rw-r--r--. 2 boinc boinc     15095 Jul 23 11:53 start_atlas.sh
[2025-07-23 21:25:19] drwxrwx--x. 2 boinc boinc        68 Jul 23 11:53 shared
[2025-07-23 21:25:19] -rw-r--r--. 2 boinc boinc    542903 Jul 23 11:53 input.tar.gz
[2025-07-23 21:25:19] -rw-r--r--. 1 boinc boinc      6392 Jul 23 11:53 init_data.xml
[2025-07-23 21:25:19] -rw-r--r--. 1 boinc boinc         0 Jul 23 11:53 boinc_lockfile
[2025-07-23 21:25:19] -rw-r--r--. 1 boinc boinc      2594 Jul 23 12:14 pandaJob.out
[2025-07-23 21:25:19] -rw-------. 1 boinc boinc    978437 Jul 23 12:16 agis_schedconf.cvmfs.json
[2025-07-23 21:25:19] drwx------. 4 boinc boinc      4096 Jul 23 12:16 pilot3
[2025-07-23 21:25:19] -rw-------. 1 boinc boinc 310037764 Jul 23 18:02 HITS.45697541._004094.pool.root.1
[2025-07-23 21:25:19] -rw-r--r--. 1 boinc boinc       532 Jul 23 18:02 boinc_task_state.xml
[2025-07-23 21:25:19] -rw-------. 1 boinc boinc      1018 Jul 23 18:03 memory_monitor_summary.json
[2025-07-23 21:25:19] -rw-------. 1 boinc boinc   1593041 Jul 23 18:03 agis_ddmendpoints.agis.ALL.json
[2025-07-23 21:25:19] -rw-------. 1 boinc boinc    434352 Jul 23 18:03 log.45697541._004094.job.log.tgz.1
[2025-07-23 21:25:19] -rw-------. 1 boinc boinc      7770 Jul 23 18:05 heartbeat.json
[2025-07-23 21:25:19] -rw-------. 1 boinc boinc        95 Jul 23 18:05 pilot_heartbeat.json
[2025-07-23 21:25:19] -rw-------. 1 boinc boinc       889 Jul 23 18:05 pilotlog.txt
[2025-07-23 21:25:19] -rw-------. 1 boinc boinc   1788760 Jul 23 18:05 log.45697541._004094.job.log.1
[2025-07-23 21:25:19] -rw-------. 1 boinc boinc       357 Jul 23 18:05 output.list
[2025-07-23 21:25:19] -rw-r--r--. 1 boinc boinc       620 Jul 23 18:05 runtime_log
[2025-07-23 21:25:19] -rw-------. 1 boinc boinc   2242560 Jul 23 18:05 result.tar.gz
[2025-07-23 21:25:19] -rw-r--r--. 1 boinc boinc      8674 Jul 23 18:05 runtime_log.err
[2025-07-23 21:25:19] -rw-------. 1 boinc boinc       658 Jul 23 18:05 OZHLDmB2Yy7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmkBKLDmPJRdgn.diag
[2025-07-23 21:25:19] -rw-r--r--. 1 boinc boinc      8192 Jul 23 21:25 boinc_mmap_file
[2025-07-23 21:25:19] -rw-r--r--. 1 boinc boinc        28 Jul 23 21:25 wrapper_checkpoint.txt
[2025-07-23 21:25:19] -rw-r--r--. 1 boinc boinc     20623 Jul 23 21:25 stderr.txt
[2025-07-23 21:25:19] HITS file was successfully produced:
[2025-07-23 21:25:19] -rw-------. 1 boinc boinc 310037764 Jul 23 18:02 shared/HITS.pool.root.1
[2025-07-23 21:25:19]  *** Contents of shared directory: ***
[2025-07-23 21:25:19] total 641564
[2025-07-23 21:25:19] -rw-r--r--. 2 boinc boinc 344113749 Jul 23 11:53 ATLAS.root_0
[2025-07-23 21:25:19] -rw-r--r--. 2 boinc boinc     15095 Jul 23 11:53 start_atlas.sh
[2025-07-23 21:25:19] -rw-r--r--. 2 boinc boinc    542903 Jul 23 11:53 input.tar.gz
[2025-07-23 21:25:19] -rw-------. 1 boinc boinc 310037764 Jul 23 18:02 HITS.pool.root.1
[2025-07-23 21:25:19] -rw-------. 1 boinc boinc   2242560 Jul 23 18:05 result.tar.gz
21:25:21 (4599): run_atlas exited; CPU time 80272.422115
21:25:21 (4599): called boinc_finish(0)

</stderr_txt>
]]>

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