Stderr output

<core_client_version>8.0.2</core_client_version>
<![CDATA[
<stderr_txt>
2025-07-26 21:30:46 (2176): Detected: vboxwrapper 26206
2025-07-26 21:30:46 (2176): Detected: BOINC client v8.0.2
2025-07-26 21:30:47 (2176): Detected: VirtualBox VboxManage Interface (Version: 7.0.6)
2025-07-26 21:30:47 (2176): Successfully copied 'init_data.xml' to the shared directory.
2025-07-26 21:30:48 (2176): Create VM. (boinc_38cf668a7e017dcc, slot#7)
2025-07-26 21:30:48 (2176): Setting Memory Size for VM. (4700MB)
2025-07-26 21:30:48 (2176): Setting CPU Count for VM. (7)
2025-07-26 21:30:49 (2176): Setting Chipset Options for VM.
2025-07-26 21:30:49 (2176): Setting Graphics Controller Options for VM.
2025-07-26 21:30:49 (2176): Setting Boot Options for VM.
2025-07-26 21:30:49 (2176): Setting Network Configuration for NAT.
2025-07-26 21:30:50 (2176): Enabling VM Network Access.
2025-07-26 21:30:50 (2176): Disabling USB Support for VM.
2025-07-26 21:30:50 (2176): Disabling COM Port Support for VM.
2025-07-26 21:30:50 (2176): Disabling LPT Port Support for VM.
2025-07-26 21:30:51 (2176): Disabling Audio Support for VM.
2025-07-26 21:30:51 (2176): Disabling Clipboard Support for VM.
2025-07-26 21:30:51 (2176): Disabling Drag and Drop Support for VM.
2025-07-26 21:30:51 (2176): Adding storage controller(s) to VM.
2025-07-26 21:30:52 (2176): Adding virtual disk drive to VM. (ATLAS_vbox_3.01_image.vdi)
2025-07-26 21:30:55 (2176): Adding VirtualBox Guest Additions to VM.
2025-07-26 21:30:55 (2176): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2025-07-26 21:30:55 (2176): forwarding host port 64807 to guest port 80
2025-07-26 21:30:55 (2176): Enabling remote desktop for VM.
2025-07-26 21:30:56 (2176): Required extension pack not installed, remote desktop not enabled.
2025-07-26 21:30:56 (2176): Enabling shared directory for VM.
2025-07-26 21:30:56 (2176): Starting VM using VBoxManage interface. (boinc_38cf668a7e017dcc, slot#7)
2025-07-26 21:31:02 (2176): Successfully started VM. (PID = '11488')
2025-07-26 21:31:02 (2176): Reporting VM Process ID to BOINC.
2025-07-26 21:31:02 (2176): Guest Log: BIOS: VirtualBox 7.0.6
2025-07-26 21:31:02 (2176): Guest Log: CPUID EDX: 0x178bfbff
2025-07-26 21:31:02 (2176): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2025-07-26 21:31:02 (2176): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2025-07-26 21:31:02 (2176): VM state change detected. (old = 'poweredoff', new = 'running')
2025-07-26 21:31:02 (2176): Detected: Web Application Enabled (http://localhost:64807)
2025-07-26 21:31:02 (2176): Preference change detected
2025-07-26 21:31:02 (2176): Setting CPU throttle for VM. (100%)
2025-07-26 21:31:03 (2176): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 60 seconds) or (Vbox_job.xml: 900 seconds))
2025-07-26 21:31:04 (2176): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2025-07-26 21:31:04 (2176): Guest Log: BIOS: Booting from Hard Disk...
2025-07-26 21:31:07 (2176): Guest Log: BIOS: KBD: unsupported int 16h function 03
2025-07-26 21:31:07 (2176): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2025-07-26 21:31:07 (2176): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2025-07-26 21:31:07 (2176): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2025-07-26 21:31:07 (2176): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2025-07-26 21:31:07 (2176): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2025-07-26 21:31:07 (2176): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2025-07-26 21:31:07 (2176): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2025-07-26 21:31:07 (2176): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2025-07-26 21:31:07 (2176): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2025-07-26 21:31:07 (2176): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2025-07-26 21:31:07 (2176): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2025-07-26 21:31:07 (2176): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2025-07-26 21:31:07 (2176): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2025-07-26 21:31:07 (2176): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2025-07-26 21:31:07 (2176): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2025-07-26 21:31:07 (2176): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2025-07-26 21:31:07 (2176): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2025-07-26 21:31:07 (2176): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2025-07-26 21:31:07 (2176): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2025-07-26 21:31:07 (2176): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2025-07-26 21:31:07 (2176): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2025-07-26 21:31:07 (2176): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2025-07-26 21:31:07 (2176): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2025-07-26 21:31:07 (2176): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2025-07-26 21:31:07 (2176): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2025-07-26 21:31:07 (2176): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2025-07-26 21:31:07 (2176): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2025-07-26 21:31:07 (2176): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2025-07-26 21:31:07 (2176): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2025-07-26 21:31:07 (2176): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2025-07-26 21:31:07 (2176): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2025-07-26 21:31:15 (2176): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2025-07-26 21:31:15 (2176): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2025-07-26 21:31:24 (2176): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2025-07-26 21:31:24 (2176): Guest Log: 00:00:00.000210 main     Log opened 2025-07-26T21:31:22.559616000Z
2025-07-26 21:31:24 (2176): Guest Log: 00:00:00.000316 main     OS Product: Linux
2025-07-26 21:31:24 (2176): Guest Log: 00:00:00.000354 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2025-07-26 21:31:24 (2176): Guest Log: 00:00:00.000386 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2025-07-26 21:31:24 (2176): Guest Log: 00:00:00.000420 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2025-07-26 21:31:24 (2176): Guest Log: 00:00:00.000421 main     Process ID: 1352
2025-07-26 21:31:24 (2176): Guest Log: 00:00:00.000422 main     Package type: LINUX_64BITS_GENERIC
2025-07-26 21:31:24 (2176): Guest Log: 00:00:00.002515 main     5.2.32 r132073 started. Verbose level = 0
2025-07-26 21:31:24 (2176): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2025-07-26 21:31:24 (2176): Guest Log: [INFO] Mounting shared directory
2025-07-26 21:31:24 (2176): Guest Log: [INFO] Checking for init_data.xml
2025-07-26 21:31:28 (2176): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2025-07-26 21:31:28 (2176): Guest Log: [INFO] Detected branch: prod
2025-07-26 21:31:28 (2176): Guest Log: This is the prod version of the ATLAS job wrapper
2025-07-26 21:31:28 (2176): Guest Log: Copying input files
2025-07-26 21:31:30 (2176): Guest Log: Copied input files into RunAtlas.
2025-07-26 21:31:30 (2176): Guest Log: This VM did not configure a local http proxy via BOINC.
2025-07-26 21:31:30 (2176): Guest Log: Small home clusters do not require a local http proxy but it is suggested if
2025-07-26 21:31:30 (2176): Guest Log: more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
2025-07-26 21:31:30 (2176): Guest Log: Further information can be found at the LHC@home message board.
2025-07-26 21:31:34 (2176): Guest Log: 00:00:10.006811 timesync vgsvcTimeSyncWorker: Radical guest time change: 14 411 621 440 000ns (GuestNow=1 753 579 894 184 798 000 ns GuestLast=1 753 565 482 563 358 000 ns fSetTimeLastLoop=true )
2025-07-26 21:31:38 (2176): Guest Log: Running cvmfs_config stat atlas.cern.ch
2025-07-26 21:31:38 (2176): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2025-07-26 21:31:38 (2176): Guest Log: 2.6.3.0 1630 0 30156 148795 4 1 3117619 4096000 0 65024 0 0 n/a 0 0 http://s1ral-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
2025-07-26 21:31:39 (2176): Guest Log: copied the webapp to /var/www
2025-07-26 21:31:39 (2176): Guest Log: ATHENA_PROC_NUMBER=7
2025-07-26 21:31:39 (2176): Guest Log: ATHENA_CORE_NUMBER=7
2025-07-26 21:31:39 (2176): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2025-07-26 21:31:39 (2176): Guest Log:  *** Starting ATLAS job. (PandaID=6742555380 taskID=45697541) ***
2025-07-26 23:11:13 (2176): Status Report: Elapsed Time: '6000.936445'
2025-07-26 23:11:13 (2176): Status Report: CPU Time: '6364.390625'
2025-07-27 00:51:24 (2176): Status Report: Elapsed Time: '12000.936445'
2025-07-27 00:51:24 (2176): Status Report: CPU Time: '12848.328125'
2025-07-27 02:31:34 (2176): Status Report: Elapsed Time: '18000.936445'
2025-07-27 02:31:34 (2176): Status Report: CPU Time: '19310.546875'
2025-07-27 04:11:44 (2176): Status Report: Elapsed Time: '24000.936445'
2025-07-27 04:11:44 (2176): Status Report: CPU Time: '25727.328125'
2025-07-27 05:44:29 (2176): Guest Log:  *** Job finished ***
2025-07-27 05:44:29 (2176): Guest Log:  *** The last 20 lines of the pilot log: ***
2025-07-27 05:44:29 (2176): Guest Log: 2025-07-27 09:44:20,554 | INFO     | [payload] control thread has finished
2025-07-27 05:44:29 (2176): Guest Log: 2025-07-27 09:44:20,654 | INFO     | [job] control thread has finished
2025-07-27 05:44:29 (2176): Guest Log: 2025-07-27 09:44:22,156 | INFO     | [data] queue_monitor thread has finished
2025-07-27 05:44:29 (2176): Guest Log: 2025-07-27 09:44:22,188 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140700744369984)>', '<ExcThread(monitor, started 140699630561024)>']
2025-07-27 05:44:29 (2176): Guest Log: 2025-07-27 09:44:23,113 | WARNING  | job_aborted has been set - aborting pilot monitoring
2025-07-27 05:44:29 (2176): Guest Log: 2025-07-27 09:44:23,113 | INFO     | [monitor] control thread has ended
2025-07-27 05:44:29 (2176): Guest Log: 2025-07-27 09:44:27,195 | INFO     | all workflow threads have been joined
2025-07-27 05:44:29 (2176): Guest Log: 2025-07-27 09:44:27,195 | INFO     | end of generic workflow (traces error code: 0)
2025-07-27 05:44:29 (2176): Guest Log: 2025-07-27 09:44:27,195 | INFO     | traces error code: 0
2025-07-27 05:44:29 (2176): Guest Log: 2025-07-27 09:44:27,195 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2025-07-27 05:44:29 (2176): Guest Log: 2025-07-27 09:44:27,312 [wrapper] ==== pilot stdout END ====
2025-07-27 05:44:29 (2176): Guest Log: 2025-07-27 09:44:27,317 [wrapper] ==== wrapper stdout RESUME ====
2025-07-27 05:44:29 (2176): Guest Log: 2025-07-27 09:44:27,322 [wrapper] pilotpid: 5982
2025-07-27 05:44:29 (2176): Guest Log: 2025-07-27 09:44:27,327 [wrapper] Pilot exit status: 0
2025-07-27 05:44:29 (2176): Guest Log: 2025-07-27 09:44:27,390 [wrapper] pandaids: 6742555380
2025-07-27 05:44:29 (2176): Guest Log: 2025-07-27 09:44:27,440 [wrapper] cleanup supervisor_pilot  3299 5983
2025-07-27 05:44:29 (2176): Guest Log: 2025-07-27 09:44:27,445 [wrapper] Test setup, not cleaning
2025-07-27 05:44:29 (2176): Guest Log: 2025-07-27 09:44:27,450 [wrapper] apfmon messages muted
2025-07-27 05:44:29 (2176): Guest Log: 2025-07-27 09:44:27,455 [wrapper] ==== wrapper stdout END ====
2025-07-27 05:44:29 (2176): Guest Log: 2025-07-27 09:44:27,460 [wrapper] ==== wrapper stderr END ====
2025-07-27 05:44:29 (2176): Guest Log:  *** Error codes and diagnostics ***
2025-07-27 05:44:29 (2176): Guest Log:     "exeErrorCode": 0,
2025-07-27 05:44:29 (2176): Guest Log:     "exeErrorDiag": "",
2025-07-27 05:44:29 (2176): Guest Log:     "pilotErrorCode": 0,
2025-07-27 05:44:29 (2176): Guest Log:     "pilotErrorDiag": "",
2025-07-27 05:44:29 (2176): Guest Log:  *** Listing of results directory ***
2025-07-27 05:44:29 (2176): Guest Log: total 312056
2025-07-27 05:44:29 (2176): Guest Log: -rw-r--r--. 1 atlas atlas    530466 Jul 22 19:19 pilot3.tar.gz
2025-07-27 05:44:29 (2176): Guest Log: -rwx------. 1 atlas atlas     36292 Jul 22 19:30 runpilot2-wrapper.sh
2025-07-27 05:44:29 (2176): Guest Log: -rw-r--r--. 1 atlas atlas      5112 Jul 22 19:30 queuedata.json
2025-07-27 05:44:29 (2176): Guest Log: -rwxr-xr-x. 1 atlas atlas     10797 Jul 27 01:31 init_data.xml
2025-07-27 05:44:29 (2176): Guest Log: -rwxr-xr-x. 1 atlas atlas    542904 Jul 27 01:31 input.tar.gz
2025-07-27 05:44:29 (2176): Guest Log: -rwxr-xr-x. 1 atlas atlas     15095 Jul 27 01:31 start_atlas.sh
2025-07-27 05:44:29 (2176): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 Jul 27 01:31 EVNT.45697539._000102.pool.root.1 -> /data/./ATLAS.root_0
2025-07-27 05:44:29 (2176): Guest Log: -rw-r--r--. 1 atlas atlas      2594 Jul 27 01:31 pandaJob.out
2025-07-27 05:44:29 (2176): Guest Log: -rw-------. 1 atlas atlas    980125 Jul 27 01:32 agis_schedconf.cvmfs.json
2025-07-27 05:44:29 (2176): Guest Log: drwx------. 4 atlas atlas      4096 Jul 27 01:33 pilot3
2025-07-27 05:44:29 (2176): Guest Log: -rw-------. 1 atlas atlas 310282925 Jul 27 09:42 HITS.45697541._003368.pool.root.1
2025-07-27 05:44:29 (2176): Guest Log: -rw-------. 1 atlas atlas      1034 Jul 27 09:43 memory_monitor_summary.json
2025-07-27 05:44:29 (2176): Guest Log: -rw-------. 1 atlas atlas        95 Jul 27 09:43 pilot_heartbeat.json
2025-07-27 05:44:29 (2176): Guest Log: -rw-------. 1 atlas atlas   1593052 Jul 27 09:44 agis_ddmendpoints.agis.ALL.json
2025-07-27 05:44:29 (2176): Guest Log: -rw-------. 1 atlas atlas    478475 Jul 27 09:44 log.45697541._003368.job.log.tgz.1
2025-07-27 05:44:29 (2176): Guest Log: -rw-------. 1 atlas atlas      7833 Jul 27 09:44 heartbeat.json
2025-07-27 05:44:29 (2176): Guest Log: -rw-------. 1 atlas atlas      4726 Jul 27 09:44 pilotlog.txt
2025-07-27 05:44:29 (2176): Guest Log: -rw-------. 1 atlas atlas   2246640 Jul 27 09:44 log.45697541._003368.job.log.1
2025-07-27 05:44:29 (2176): Guest Log: -rw-------. 1 atlas atlas       357 Jul 27 09:44 output.list
2025-07-27 05:44:29 (2176): Guest Log: -rw-r--r--. 1 atlas atlas       620 Jul 27 09:44 runtime_log
2025-07-27 05:44:29 (2176): Guest Log: -rw-------. 1 atlas atlas   2744320 Jul 27 09:44 result.tar.gz
2025-07-27 05:44:29 (2176): Guest Log: -rw-------. 1 atlas atlas       662 Jul 27 09:44 syKLDmbsXy7n9Rq4apOajLDm4fhM0noT9bVof3QYDmINvKDmFroxMo.diag
2025-07-27 05:44:29 (2176): Guest Log: -rw-r--r--. 1 atlas atlas      8603 Jul 27 09:44 runtime_log.err
2025-07-27 05:44:29 (2176): Guest Log: Looking for outputfile HITS.45697541._003368.pool.root.1
2025-07-27 05:44:29 (2176): Guest Log: HITS file was successfully produced
2025-07-27 05:44:29 (2176): Guest Log: -rw-------. 1 atlas atlas 310282925 Jul 27 09:42 /home/atlas/RunAtlas/HITS.45697541._003368.pool.root.1
2025-07-27 05:44:31 (2176): Guest Log: Successfully finished the ATLAS job!
2025-07-27 05:44:31 (2176): Guest Log: Copying the results back to the shared directory!
2025-07-27 05:44:31 (2176): Guest Log:  *** Contents of shared directory: ***
2025-07-27 05:44:31 (2176): Guest Log: total 642032
2025-07-27 05:44:31 (2176): Guest Log: -rwxrwxrwx. 1 root root 343835171 Jul 27 01:30 ATLAS.root_0
2025-07-27 05:44:31 (2176): Guest Log: -rwxrwxrwx. 1 root root 310282925 Jul 27 09:44 HITS.pool.root.1
2025-07-27 05:44:31 (2176): Guest Log: -rwxrwxrwx. 1 root root     10797 Jul 27 01:30 init_data.xml
2025-07-27 05:44:31 (2176): Guest Log: -rwxrwxrwx. 1 root root    542904 Jul 23 03:32 input.tar.gz
2025-07-27 05:44:31 (2176): Guest Log: -rwxrwxrwx. 1 root root   2744320 Jul 27 09:44 result.tar.gz
2025-07-27 05:44:31 (2176): Guest Log: -rwxrwxrwx. 1 root root     15095 Jul 23 03:32 start_atlas.sh
2025-07-27 05:44:31 (2176): Guest Log:  *** Success! Shutting down the machine. ***
2025-07-27 05:44:31 (2176): VM Completion File Detected.
2025-07-27 05:44:31 (2176): Powering off VM.
2025-07-27 05:44:32 (2176): Successfully stopped VM.
2025-07-27 05:44:32 (2176): Deregistering VM. (boinc_38cf668a7e017dcc, slot#7)
2025-07-27 05:44:32 (2176): Removing network bandwidth throttle group from VM.
2025-07-27 05:44:32 (2176): Removing VM from VirtualBox.
05:44:38 (2176): called boinc_finish(0)

</stderr_txt>
]]>

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