Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
13:31:12 (2920075): wrapper (7.7.26015): starting
13:31:12 (2920075): wrapper: running run_atlas (--nthreads 4)
[2025-07-25 13:31:12] Arguments: --nthreads 4
[2025-07-25 13:31:12] Threads: 4
[2025-07-25 13:31:12] Checking for CVMFS
[2025-07-25 13:31:12] No cvmfs_config command found, will try listing directly
[2025-07-25 13:31:12] CVMFS is ok
[2025-07-25 13:31:12] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-07-25 13:31:12] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-07-25 13:31:12] Further information can be found at the LHC@home message board.
[2025-07-25 13:31:12] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-25 13:31:12] Checking for apptainer binary...
[2025-07-25 13:31:12] which: no apptainer in ((null))
[2025-07-25 13:31:12] apptainer is not installed, using version from CVMFS
[2025-07-25 13:31:12] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-25 13:31:13] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot112/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut15.grid.cesnet.cz
[2025-07-25 13:31:13] apptainer works
[2025-07-25 13:31:13] Set ATHENA_PROC_NUMBER=4
[2025-07-25 13:31:13] Set ATHENA_CORE_NUMBER=4
[2025-07-25 13:31:13] Starting ATLAS job with PandaID=6741714720
[2025-07-25 13:31:13] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot112/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
16:55:56 (3945636): wrapper (7.7.26015): starting
16:55:56 (3945636): wrapper: running run_atlas (--nthreads 4)
[2025-07-25 16:55:56] Arguments: --nthreads 4
[2025-07-25 16:55:56] Threads: 4
[2025-07-25 16:55:56] This job has been restarted, cleaning up previous attempt
[2025-07-25 16:55:56] Checking for CVMFS
[2025-07-25 16:55:56] No cvmfs_config command found, will try listing directly
[2025-07-25 16:55:56] CVMFS is ok
[2025-07-25 16:55:56] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-07-25 16:55:56] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-07-25 16:55:56] Further information can be found at the LHC@home message board.
[2025-07-25 16:55:56] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-25 16:55:56] Checking for apptainer binary...
[2025-07-25 16:55:56] which: no apptainer in ((null))
[2025-07-25 16:55:56] apptainer is not installed, using version from CVMFS
[2025-07-25 16:55:56] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-25 16:55:56] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot112/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut15.grid.cesnet.cz
[2025-07-25 16:55:56] apptainer works
[2025-07-25 16:55:56] Set ATHENA_PROC_NUMBER=4
[2025-07-25 16:55:56] Set ATHENA_CORE_NUMBER=4
[2025-07-25 16:55:56] Starting ATLAS job with PandaID=6741714720
[2025-07-25 16:55:56] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot112/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-25 20:34:26]  *** The last 200 lines of the pilot log: ***
[2025-07-25 20:34:26] 2025-07-25 18:33:03,347 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-25 20:34:26] 2025-07-25 18:33:03,347 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-25 20:34:26] 2025-07-25 18:33:03,351 | INFO     | fitting pss+swap vs Time
[2025-07-25 20:34:26] 2025-07-25 18:33:03,352 | INFO     | sum of square deviations: 2996454322.0
[2025-07-25 20:34:26] 2025-07-25 18:33:03,353 | INFO     | sum of deviations: 18252394929.0
[2025-07-25 20:34:26] 2025-07-25 18:33:03,353 | INFO     | mean x: 1753461871.0
[2025-07-25 20:34:26] 2025-07-25 18:33:03,353 | INFO     | mean y: 2331084.3943661973
[2025-07-25 20:34:26] 2025-07-25 18:33:03,353 | INFO     | -- intersect: -10678585466.695732
[2025-07-25 20:34:26] 2025-07-25 18:33:03,354 | INFO     | intersect: -10678585466.695732
[2025-07-25 20:34:26] 2025-07-25 18:33:03,354 | INFO     | chi2: 2.0962717157499275
[2025-07-25 20:34:26] 2025-07-25 18:33:03,354 | INFO     | sum of square deviations: 2790348132.0
[2025-07-25 20:34:26] 2025-07-25 18:33:03,356 | INFO     | sum of deviations: 29946312699.0
[2025-07-25 20:34:26] 2025-07-25 18:33:03,356 | INFO     | mean x: 1753461718.5
[2025-07-25 20:34:26] 2025-07-25 18:33:03,356 | INFO     | mean y: 2339562.269230769
[2025-07-25 20:34:26] 2025-07-25 18:33:03,356 | INFO     | -- intersect: -18815997951.154316
[2025-07-25 20:34:26] 2025-07-25 18:33:03,356 | INFO     | intersect: -18815997951.154316
[2025-07-25 20:34:26] 2025-07-25 18:33:03,356 | INFO     | chi2: 1.4262053281557672
[2025-07-25 20:34:26] 2025-07-25 18:33:03,356 | INFO     | current chi2=1.4262053281557672 (change=31.96467244965181 %)
[2025-07-25 20:34:26] 2025-07-25 18:33:03,357 | INFO     | sum of square deviations: 2593916542.0
[2025-07-25 20:34:26] 2025-07-25 18:33:03,358 | INFO     | sum of deviations: 29030431919.999992
[2025-07-25 20:34:26] 2025-07-25 18:33:03,358 | INFO     | mean x: 1753461566.0
[2025-07-25 20:34:26] 2025-07-25 18:33:03,358 | INFO     | mean y: 2338851.118226601
[2025-07-25 20:34:26] 2025-07-25 18:33:03,358 | INFO     | -- intersect: -19621941958.182995
[2025-07-25 20:34:26] 2025-07-25 18:33:03,359 | INFO     | intersect: -19621941958.182995
[2025-07-25 20:34:26] 2025-07-25 18:33:03,359 | INFO     | chi2: 1.4269988725711917
[2025-07-25 20:34:26] 2025-07-25 18:33:03,359 | INFO     | current chi2=1.4269988725711917 (change=-0.055640264396620856 %)
[2025-07-25 20:34:26] 2025-07-25 18:33:03,359 | INFO     | right removable region: 202
[2025-07-25 20:34:26] 2025-07-25 18:33:03,359 | INFO     | sum of square deviations: 2790348132.0
[2025-07-25 20:34:26] 2025-07-25 18:33:03,361 | INFO     | sum of deviations: -11137130144.0
[2025-07-25 20:34:26] 2025-07-25 18:33:03,361 | INFO     | mean x: 1753462023.5
[2025-07-25 20:34:26] 2025-07-25 18:33:03,361 | INFO     | mean y: 2352583.701923077
[2025-07-25 20:34:26] 2025-07-25 18:33:03,361 | INFO     | -- intersect: 7000954132.492856
[2025-07-25 20:34:26] 2025-07-25 18:33:03,361 | INFO     | intersect: 7000954132.492856
[2025-07-25 20:34:26] 2025-07-25 18:33:03,361 | INFO     | chi2: 0.6987204276190084
[2025-07-25 20:34:26] 2025-07-25 18:33:03,362 | INFO     | current chi2=0.6987204276190084 (change=66.66842268732105 %)
[2025-07-25 20:34:26] 2025-07-25 18:33:03,362 | INFO     | sum of square deviations: 2593916542.0
[2025-07-25 20:34:26] 2025-07-25 18:33:03,363 | INFO     | sum of deviations: -10936914053.0
[2025-07-25 20:34:26] 2025-07-25 18:33:03,363 | INFO     | mean x: 1753462176.0
[2025-07-25 20:34:26] 2025-07-25 18:33:03,363 | INFO     | mean y: 2352412.2167487685
[2025-07-25 20:34:26] 2025-07-25 18:33:03,364 | INFO     | -- intersect: 7395599189.2745285
[2025-07-25 20:34:26] 2025-07-25 18:33:03,364 | INFO     | intersect: 7395599189.2745285
[2025-07-25 20:34:26] 2025-07-25 18:33:03,364 | INFO     | chi2: 0.6954473017348176
[2025-07-25 20:34:26] 2025-07-25 18:33:03,364 | INFO     | current chi2=0.6954473017348176 (change=0.46844571230649035 %)
[2025-07-25 20:34:26] 2025-07-25 18:33:03,364 | INFO     | left removable region: 20
[2025-07-25 20:34:26] 2025-07-25 18:33:03,364 | INFO     | sum of square deviations: 1869302025.5
[2025-07-25 20:34:26] 2025-07-25 18:33:03,365 | INFO     | sum of deviations: 3847145529.5000005
[2025-07-25 20:34:26] 2025-07-25 18:33:03,366 | INFO     | mean x: 1753462145.5
[2025-07-25 20:34:26] 2025-07-25 18:33:03,366 | INFO     | mean y: 2358649.1703296704
[2025-07-25 20:34:26] 2025-07-25 18:33:03,366 | INFO     | -- intersect: -3606380849.4152102
[2025-07-25 20:34:26] 2025-07-25 18:33:03,366 | INFO     | intersect: -3606380849.4152102
[2025-07-25 20:34:26] 2025-07-25 18:33:03,366 | INFO     | chi2: 0.0015654322284274344
[2025-07-25 20:34:26] 2025-07-25 18:33:03,366 | INFO     | -- intersect: -3606380849.4152102
[2025-07-25 20:34:26] 2025-07-25 18:33:03,366 | INFO     | current memory leak: 2.06 B/s (using 182 data points, chi2=0.00)
[2025-07-25 20:34:26] 2025-07-25 18:33:03,367 | INFO     | could have reported an average CPU frequency of 2707 MHz (11 samples)
[2025-07-25 20:34:26] 2025-07-25 18:33:03,367 | INFO     | ..............................
[2025-07-25 20:34:26] 2025-07-25 18:33:03,367 | INFO     | . Timing measurements:
[2025-07-25 20:34:26] 2025-07-25 18:33:03,367 | INFO     | . get job = 0 s
[2025-07-25 20:34:26] 2025-07-25 18:33:03,367 | INFO     | . initial setup = 1 s
[2025-07-25 20:34:26] 2025-07-25 18:33:03,367 | INFO     | . payload setup = 9 s
[2025-07-25 20:34:26] 2025-07-25 18:33:03,368 | INFO     | . stage-in = 0 s
[2025-07-25 20:34:26] 2025-07-25 18:33:03,368 | INFO     | . payload execution = 12968 s
[2025-07-25 20:34:26] 2025-07-25 18:33:03,368 | INFO     | . stage-out = 1 s
[2025-07-25 20:34:26] 2025-07-25 18:33:03,368 | INFO     | . log creation = 0 s
[2025-07-25 20:34:26] 2025-07-25 18:33:03,368 | INFO     | ..............................
[2025-07-25 20:34:26] 2025-07-25 18:33:03,471 | INFO     | 
[2025-07-25 20:34:26] 2025-07-25 18:33:03,471 | INFO     | job summary report
[2025-07-25 20:34:26] 2025-07-25 18:33:03,471 | INFO     | --------------------------------------------------
[2025-07-25 20:34:26] 2025-07-25 18:33:03,471 | INFO     | PanDA job id: 6741714720
[2025-07-25 20:34:26] 2025-07-25 18:33:03,471 | INFO     | task id: 45697453
[2025-07-25 20:34:26] 2025-07-25 18:33:03,471 | INFO     | errors: (none)
[2025-07-25 20:34:26] 2025-07-25 18:33:03,471 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-25 20:34:26] 2025-07-25 18:33:03,471 | INFO     | pilot state: finished 
[2025-07-25 20:34:26] 2025-07-25 18:33:03,471 | INFO     | transexitcode: 0
[2025-07-25 20:34:26] 2025-07-25 18:33:03,471 | INFO     | exeerrorcode: 0
[2025-07-25 20:34:26] 2025-07-25 18:33:03,472 | INFO     | exeerrordiag: 
[2025-07-25 20:34:26] 2025-07-25 18:33:03,472 | INFO     | exitcode: 0
[2025-07-25 20:34:26] 2025-07-25 18:33:03,472 | INFO     | exitmsg: OK
[2025-07-25 20:34:26] 2025-07-25 18:33:03,472 | INFO     | cpuconsumptiontime: 49728 s
[2025-07-25 20:34:26] 2025-07-25 18:33:03,472 | INFO     | nevents: 400
[2025-07-25 20:34:26] 2025-07-25 18:33:03,472 | INFO     | neventsw: 0
[2025-07-25 20:34:26] 2025-07-25 18:33:03,472 | INFO     | pid: 3957250
[2025-07-25 20:34:26] 2025-07-25 18:33:03,472 | INFO     | pgrp: 3957250
[2025-07-25 20:34:26] 2025-07-25 18:33:03,472 | INFO     | corecount: 4
[2025-07-25 20:34:26] 2025-07-25 18:33:03,472 | INFO     | event service: False
[2025-07-25 20:34:26] 2025-07-25 18:33:03,472 | INFO     | sizes: {0: 2397574, 7: 2397836, 11: 2397864, 12982: 2428600, 12984: 2437622, 12987: 2437678, 12996: 2438000}
[2025-07-25 20:34:26] 2025-07-25 18:33:03,472 | INFO     | --------------------------------------------------
[2025-07-25 20:34:26] 2025-07-25 18:33:03,472 | INFO     | 
[2025-07-25 20:34:26] 2025-07-25 18:33:03,473 | INFO     | executing command: ls -lF /scratch/boinc/var/slot112/slots/0
[2025-07-25 20:34:26] 2025-07-25 18:33:03,507 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-25 20:34:26] 2025-07-25 18:33:03,507 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-25 20:34:26] 2025-07-25 18:33:03,508 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-25 20:34:26] 2025-07-25 18:33:03,508 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-25 20:34:26] 2025-07-25 18:33:03,508 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-25 20:34:26] 2025-07-25 18:33:03,508 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-25 20:34:26] 2025-07-25 18:33:03,508 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-25 20:34:26] 2025-07-25 18:33:03,508 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-25 20:34:26] 2025-07-25 18:33:03,508 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-25 20:34:26] 2025-07-25 18:33:03,508 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-25 20:34:26] 2025-07-25 18:33:03,508 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-25 20:34:26] 2025-07-25 18:33:03,508 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-25 20:34:26] 2025-07-25 18:33:03,508 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-25 20:34:26] 2025-07-25 18:33:03,509 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-25 20:34:26] 2025-07-25 18:33:03,509 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-25 20:34:26] 2025-07-25 18:33:03,509 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-25 20:34:26] 2025-07-25 18:33:03,509 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-25 20:34:26] 2025-07-25 18:33:03,509 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-25 20:34:26] 2025-07-25 18:33:03,509 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-25 20:34:26] 2025-07-25 18:33:03,509 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-25 20:34:26] 2025-07-25 18:33:03,509 | INFO     | job 6741714720 has completed (purged errors)
[2025-07-25 20:34:26] 2025-07-25 18:33:03,509 | INFO     | overall cleanup function is called
[2025-07-25 20:34:26] 2025-07-25 18:33:04,516 | INFO     | --- collectZombieJob: --- 10, [3957250]
[2025-07-25 20:34:26] 2025-07-25 18:33:04,516 | INFO     | zombie collector waiting for pid 3957250
[2025-07-25 20:34:26] 2025-07-25 18:33:04,516 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-25 20:34:26] 2025-07-25 18:33:04,517 | INFO     | collected zombie processes
[2025-07-25 20:34:26] 2025-07-25 18:33:04,517 | INFO     | will attempt to kill all subprocesses of pid=3957250
[2025-07-25 20:34:26] 2025-07-25 18:33:05,194 | INFO     | process IDs to be killed: [3957250] (in reverse order)
[2025-07-25 20:34:26] 2025-07-25 18:33:05,415 | WARNING  | found no corresponding commands to process id(s)
[2025-07-25 20:34:26] 2025-07-25 18:33:05,416 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-25 20:34:26] 2025-07-25 18:33:05,439 | INFO     | did not find any defunct processes belonging to 3957250
[2025-07-25 20:34:26] 2025-07-25 18:33:05,460 | INFO     | did not find any defunct processes belonging to 3957250
[2025-07-25 20:34:26] 2025-07-25 18:33:05,460 | INFO     | ready for new job
[2025-07-25 20:34:26] 2025-07-25 18:33:05,461 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-25 20:34:26] 2025-07-25 18:33:05,463 | INFO     | ***************************************
[2025-07-25 20:34:26] 2025-07-25 18:33:05,463 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-25 20:34:26] 2025-07-25 18:33:05,463 | INFO     | ***************************************
[2025-07-25 20:34:26] 2025-07-25 18:33:05,463 | INFO     | 
[2025-07-25 20:34:26] 2025-07-25 18:33:05,471 | INFO     | architecture information:
[2025-07-25 20:34:26] 2025-07-25 18:33:05,471 | INFO     | executing command: cat /etc/os-release
[2025-07-25 20:34:26] 2025-07-25 18:33:05,499 | INFO     | cat /etc/os-release:
[2025-07-25 20:34:26] NAME="CentOS Linux"
[2025-07-25 20:34:26] VERSION="7 (Core)"
[2025-07-25 20:34:26] ID="centos"
[2025-07-25 20:34:26] ID_LIKE="rhel fedora"
[2025-07-25 20:34:26] VERSION_ID="7"
[2025-07-25 20:34:26] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-25 20:34:26] ANSI_COLOR="0;31"
[2025-07-25 20:34:26] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-25 20:34:26] HOME_URL="https://www.centos.org/"
[2025-07-25 20:34:26] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-25 20:34:26] 
[2025-07-25 20:34:26] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-25 20:34:26] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-25 20:34:26] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-25 20:34:26] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-25 20:34:26] 
[2025-07-25 20:34:26] 2025-07-25 18:33:05,499 | INFO     | ***************************************
[2025-07-25 20:34:26] 2025-07-25 18:33:06,002 | INFO     | executing command: df -mP /scratch/boinc/var/slot112/slots/0
[2025-07-25 20:34:26] 2025-07-25 18:33:06,024 | INFO     | sufficient remaining disk space (3213696696320 B)
[2025-07-25 20:34:26] 2025-07-25 18:33:06,024 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-25 20:34:26] 2025-07-25 18:33:06,024 | INFO     | current server update state: UPDATING_FINAL
[2025-07-25 20:34:26] 2025-07-25 18:33:06,024 | INFO     | update_server=False
[2025-07-25 20:34:26] 2025-07-25 18:33:06,024 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-25 20:34:26] 2025-07-25 18:33:06,025 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-25 20:34:26] 2025-07-25 18:33:06,465 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-07-25 20:34:26] 2025-07-25 18:33:06,466 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-07-25 20:34:26] 2025-07-25 18:33:06,466 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-25 20:34:26] 2025-07-25 18:33:06,466 | INFO     | will abort loop
[2025-07-25 20:34:26] 2025-07-25 18:33:06,960 | INFO     | all job control threads have been joined
[2025-07-25 20:34:26] 2025-07-25 18:33:06,975 | INFO     | all payload control threads have been joined
[2025-07-25 20:34:26] 2025-07-25 18:33:07,030 | INFO     | [job] retrieve thread has finished
[2025-07-25 20:34:26] 2025-07-25 18:33:07,053 | INFO     | all data control threads have been joined
[2025-07-25 20:34:26] 2025-07-25 18:33:07,068 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-25 20:34:26] 2025-07-25 18:33:07,198 | INFO     | [payload] validate_post thread has finished
[2025-07-25 20:34:26] 2025-07-25 18:33:07,327 | INFO     | [job] create_data_payload thread has finished
[2025-07-25 20:34:26] 2025-07-25 18:33:07,471 | INFO     | [job] job monitor thread has finished
[2025-07-25 20:34:26] 2025-07-25 18:33:07,585 | INFO     | [payload] failed_post thread has finished
[2025-07-25 20:34:26] 2025-07-25 18:33:07,598 | INFO     | [payload] execute_payloads thread has finished
[2025-07-25 20:34:26] 2025-07-25 18:33:07,657 | INFO     | [job] validate thread has finished
[2025-07-25 20:34:26] 2025-07-25 18:33:07,751 | INFO     | [payload] validate_pre thread has finished
[2025-07-25 20:34:26] 2025-07-25 18:33:07,805 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-25 20:34:26] 2025-07-25 18:33:07,966 | INFO     | [job] control thread has finished
[2025-07-25 20:34:26] 2025-07-25 18:33:07,980 | INFO     | [payload] control thread has finished
[2025-07-25 20:34:26] 2025-07-25 18:33:07,987 | INFO     | [data] copytool_in thread has finished
[2025-07-25 20:34:26] 2025-07-25 18:33:08,058 | INFO     | [data] control thread has finished
[2025-07-25 20:34:26] 2025-07-25 18:33:08,483 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-25 20:34:26] 2025-07-25 18:33:09,070 | INFO     | [data] copytool_out thread has finished
[2025-07-25 20:34:26] 2025-07-25 18:33:09,487 | INFO     | [job] queue monitor thread has finished
[2025-07-25 20:34:26] 2025-07-25 18:33:10,030 | INFO     | [data] queue_monitor thread has finished
[2025-07-25 20:34:26] 2025-07-25 18:33:11,046 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 23154051839808)>', '<ExcThread(monitor, started 23153810040576)>']
[2025-07-25 20:34:26] 2025-07-25 18:33:16,066 | INFO     | all workflow threads have been joined
[2025-07-25 20:34:26] 2025-07-25 18:33:16,066 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-25 20:34:26] 2025-07-25 18:33:16,067 | INFO     | traces error code: 0
[2025-07-25 20:34:26] 2025-07-25 18:33:16,067 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-25 20:34:26] 2025-07-25 18:33:35,308 | INFO     | PID=3949703 has CPU usage=5.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-07-25 20:34:26] 2025-07-25 18:33:35,308 | INFO     | .. there are 12 such processes running
[2025-07-25 20:34:26] 2025-07-25 18:33:35,309 | INFO     | found 0 job(s) in 20 queues
[2025-07-25 20:34:26] 2025-07-25 18:33:35,309 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-25 20:34:26] 2025-07-25 18:33:35,309 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-25 20:34:26] 2025-07-25 18:33:35,309 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-25 20:34:26] 2025-07-25 18:33:35,309 | INFO     | [monitor] control thread has ended
[2025-07-25 20:34:26] 2025-07-25 18:33:35,457 [wrapper] ==== pilot stdout END ====
[2025-07-25 20:34:26] 2025-07-25 18:33:35,461 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-25 20:34:26] 2025-07-25 18:33:35,467 [wrapper] pilotpid: 3949703
[2025-07-25 20:34:26] 2025-07-25 18:33:35,471 [wrapper] Pilot exit status: 0
[2025-07-25 20:34:26] 2025-07-25 18:33:35,493 [wrapper] pandaids: 6741714720 6741714720
[2025-07-25 20:34:26] 2025-07-25 18:33:35,635 [wrapper] cleanup supervisor_pilot  424929 3949704
[2025-07-25 20:34:26] 2025-07-25 18:33:35,638 [wrapper] Test setup, not cleaning
[2025-07-25 20:34:26] 2025-07-25 18:33:35,642 [wrapper] apfmon messages muted
[2025-07-25 20:34:26] 2025-07-25 18:33:35,646 [wrapper] ==== wrapper stdout END ====
[2025-07-25 20:34:26] 2025-07-25 18:33:35,649 [wrapper] ==== wrapper stderr END ====
[2025-07-25 20:34:26]  *** Error codes and diagnostics ***
[2025-07-25 20:34:26]     "exeErrorCode": 0,
[2025-07-25 20:34:26]     "exeErrorDiag": "",
[2025-07-25 20:34:26]     "pilotErrorCode": 0,
[2025-07-25 20:34:26]     "pilotErrorDiag": "",
[2025-07-25 20:34:26]  *** Listing of results directory ***
[2025-07-25 20:34:26] total 887792
[2025-07-25 20:34:26] drwx------ 4 boinc boinc      4096 Jun 17 12:04 pilot3
[2025-07-25 20:34:26] -rw-r--r-- 1 boinc boinc    530466 Jul 22 05:26 pilot3.tar.gz
[2025-07-25 20:34:26] -rw-r--r-- 1 boinc boinc      5112 Jul 22 05:46 queuedata.json
[2025-07-25 20:34:26] -rwx------ 1 boinc boinc     36292 Jul 22 05:47 runpilot2-wrapper.sh
[2025-07-25 20:34:26] -rw-r--r-- 1 boinc boinc       100 Jul 25 13:31 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-25 20:34:26] -rwxr-xr-x 1 boinc boinc      7986 Jul 25 13:31 run_atlas
[2025-07-25 20:34:26] -rw-r--r-- 1 boinc boinc       105 Jul 25 13:31 job.xml
[2025-07-25 20:34:26] -rw-r--r-- 3 boinc boinc 319386978 Jul 25 13:31 EVNT.45697451._000170.pool.root.1
[2025-07-25 20:34:26] -rw-r--r-- 3 boinc boinc 319386978 Jul 25 13:31 ATLAS.root_0
[2025-07-25 20:34:26] -rw-r--r-- 2 boinc boinc     15095 Jul 25 13:31 start_atlas.sh
[2025-07-25 20:34:26] drwxrwx--x 2 boinc boinc      4096 Jul 25 13:31 shared
[2025-07-25 20:34:26] -rw-r--r-- 2 boinc boinc    542905 Jul 25 13:31 input.tar.gz
[2025-07-25 20:34:26] -rw-r--r-- 1 boinc boinc         0 Jul 25 13:31 boinc_lockfile
[2025-07-25 20:34:26] -rw-r--r-- 1 boinc boinc      2633 Jul 25 16:55 pandaJob.out
[2025-07-25 20:34:26] -rw------- 1 boinc boinc    979325 Jul 25 16:56 agis_schedconf.cvmfs.json
[2025-07-25 20:34:26] -rw-r--r-- 1 boinc boinc      6698 Jul 25 19:32 init_data.xml
[2025-07-25 20:34:26] -rw------- 1 boinc boinc 263336137 Jul 25 20:32 HITS.45697453._004242.pool.root.1
[2025-07-25 20:34:26] -rw-r--r-- 1 boinc boinc       532 Jul 25 20:32 boinc_task_state.xml
[2025-07-25 20:34:26] -rw------- 1 boinc boinc      1036 Jul 25 20:32 memory_monitor_summary.json
[2025-07-25 20:34:26] -rw------- 1 boinc boinc   1593052 Jul 25 20:32 agis_ddmendpoints.agis.ALL.json
[2025-07-25 20:34:26] -rw------- 1 boinc boinc    334354 Jul 25 20:32 log.45697453._004242.job.log.tgz.1
[2025-07-25 20:34:26] -rw------- 1 boinc boinc        96 Jul 25 20:32 pilot_heartbeat.json
[2025-07-25 20:34:26] -rw------- 1 boinc boinc      7792 Jul 25 20:33 heartbeat.json
[2025-07-25 20:34:26] -rw------- 1 boinc boinc       823 Jul 25 20:33 pilotlog.txt
[2025-07-25 20:34:26] -rw------- 1 boinc boinc   1217577 Jul 25 20:33 log.45697453._004242.job.log.1
[2025-07-25 20:34:26] -rw------- 1 boinc boinc       357 Jul 25 20:33 output.list
[2025-07-25 20:34:26] -rw-r--r-- 1 boinc boinc       620 Jul 25 20:33 runtime_log
[2025-07-25 20:34:26] -rw------- 1 boinc boinc   1566720 Jul 25 20:33 result.tar.gz
[2025-07-25 20:34:26] -rw-r--r-- 1 boinc boinc      9119 Jul 25 20:33 runtime_log.err
[2025-07-25 20:34:26] -rw------- 1 boinc boinc       791 Jul 25 20:33 VDiMDmR9Iy7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDm4FILDmffSYTm.diag
[2025-07-25 20:34:26] -rw-r--r-- 1 boinc boinc        28 Jul 25 20:34 wrapper_checkpoint.txt
[2025-07-25 20:34:26] -rw-r--r-- 1 boinc boinc      8192 Jul 25 20:34 boinc_mmap_file
[2025-07-25 20:34:26] -rw-r--r-- 1 boinc boinc     22635 Jul 25 20:34 stderr.txt
[2025-07-25 20:34:26] HITS file was successfully produced:
[2025-07-25 20:34:26] -rw------- 1 boinc boinc 263336137 Jul 25 20:32 shared/HITS.pool.root.1
[2025-07-25 20:34:26]  *** Contents of shared directory: ***
[2025-07-25 20:34:26] total 571160
[2025-07-25 20:34:26] -rw-r--r-- 3 boinc boinc 319386978 Jul 25 13:31 ATLAS.root_0
[2025-07-25 20:34:26] -rw-r--r-- 2 boinc boinc     15095 Jul 25 13:31 start_atlas.sh
[2025-07-25 20:34:26] -rw-r--r-- 2 boinc boinc    542905 Jul 25 13:31 input.tar.gz
[2025-07-25 20:34:26] -rw------- 1 boinc boinc 263336137 Jul 25 20:32 HITS.pool.root.1
[2025-07-25 20:34:26] -rw------- 1 boinc boinc   1566720 Jul 25 20:33 result.tar.gz
20:34:27 (3945636): run_atlas exited; CPU time 50392.788621
20:34:27 (3945636): called boinc_finish(0)

</stderr_txt>
]]>

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