Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
22:36:51 (2021254): wrapper (7.7.26015): starting
22:36:51 (2021254): wrapper: running run_atlas (--nthreads 8)
[2025-07-22 22:36:51] Arguments: --nthreads 8
[2025-07-22 22:36:51] Threads: 8
[2025-07-22 22:36:51] Checking for CVMFS
[2025-07-22 22:36:51] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-22 22:36:52] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-22 22:36:52] Running cvmfs_config stat atlas.cern.ch
[2025-07-22 22:36:52] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-22 22:36:52] 2.13.0.0 104956 20883 198044 148642 2 635 21663264 40960000 38384 16776704 0 305770426 99.737 217146523 28259 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-07-22 22:36:52] CVMFS is ok
[2025-07-22 22:36:52] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-07-22 22:36:52] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-07-22 22:36:52] Further information can be found at the LHC@home message board.
[2025-07-22 22:36:52] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-22 22:36:52] Checking for apptainer binary...
[2025-07-22 22:36:52] Using apptainer found in PATH at /usr/bin/apptainer
[2025-07-22 22:36:52] Running /usr/bin/apptainer --version
[2025-07-22 22:36:52] apptainer version 1.4.1-1.el9
[2025-07-22 22:36:52] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-22 22:36:53] c8-7-4.aglt2.org
[2025-07-22 22:36:53] apptainer works
[2025-07-22 22:36:53] Set ATHENA_PROC_NUMBER=8
[2025-07-22 22:36:53] Set ATHENA_CORE_NUMBER=8
[2025-07-22 22:36:53] Starting ATLAS job with PandaID=6742554834
[2025-07-22 22:36:53] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/3 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-23 00:04:35]  *** The last 200 lines of the pilot log: ***
[2025-07-23 00:04:35]  status_code=0
[2025-07-23 00:04:35]  storage_token=
[2025-07-23 00:04:35]  surl=/tmp/boinchome/slots/3/PanDA_Pilot-6742554834/log.45697541._003073.job.log.tgz.1
[2025-07-23 00:04:35]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/50/df/log.45697541._003073.job.log.tgz.1
[2025-07-23 00:04:35]  workdir=None
[2025-07-23 00:04:35] ]
[2025-07-23 00:04:35] 2025-07-23 04:03:51,325 | INFO     | transferring file log.45697541._003073.job.log.tgz.1 from /tmp/boinchome/slots/3/PanDA_Pilot-6742554834/log.45697541._003073.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-07-23 00:04:35] 2025-07-23 04:03:51,325 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/3/PanDA_Pilot-6742554834/log.45697541._003073.job.log.tgz.1 /tmp/boinchome/slots/3/log.45697541._003073.job
[2025-07-23 00:04:35] 2025-07-23 04:03:51,353 | INFO     | adding to output.list: log.45697541._003073.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/50/df/log.45697541._003073.job.log.tg
[2025-07-23 00:04:35] 2025-07-23 04:03:51,353 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-07-23 00:04:35] 2025-07-23 04:03:51,353 | INFO     | summary of transferred files:
[2025-07-23 00:04:35] 2025-07-23 04:03:51,353 | INFO     |  -- lfn=log.45697541._003073.job.log.tgz.1, status_code=0, status=transferred
[2025-07-23 00:04:35] 2025-07-23 04:03:51,353 | INFO     | stage-out finished correctly
[2025-07-23 00:04:35] 2025-07-23 04:03:52,051 | WARNING  | process 2075683 can no longer be monitored (due to stat problems) - aborting
[2025-07-23 00:04:35] 2025-07-23 04:03:52,051 | INFO     | using path: /tmp/boinchome/slots/3/PanDA_Pilot-6742554834/memory_monitor_summary.json (trf name=prmon)
[2025-07-23 00:04:35] 2025-07-23 04:03:52,401 | INFO     | 5195s have passed since pilot start - server update state is 'RUNNING'
[2025-07-23 00:04:35] 2025-07-23 04:03:52,511 | INFO     | number of running child processes to parent process 2075683: 1
[2025-07-23 00:04:35] 2025-07-23 04:03:52,512 | INFO     | maximum number of monitored processes: 6
[2025-07-23 00:04:35] 2025-07-23 04:03:54,410 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-07-23 00:04:35] 2025-07-23 04:03:54,464 | INFO     | job 6742554834 has state=finished
[2025-07-23 00:04:35] 2025-07-23 04:03:54,464 | INFO     | preparing for final server update for job 6742554834 in state='finished'
[2025-07-23 00:04:35] 2025-07-23 04:03:54,464 | INFO     | this job has now completed (state=finished)
[2025-07-23 00:04:35] 2025-07-23 04:03:54,464 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-07-23 00:04:35] 2025-07-23 04:03:54,464 | INFO     | log transfer has been attempted: DONE
[2025-07-23 00:04:35] 2025-07-23 04:03:54,464 | INFO     | job 6742554834 has finished - writing final server update
[2025-07-23 00:04:35] 2025-07-23 04:03:54,465 | INFO     | total number of processed events: 400 (read)
[2025-07-23 00:04:35] 2025-07-23 04:03:54,468 | INFO     | executing command: lscpu
[2025-07-23 00:04:35] 2025-07-23 04:03:54,576 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-07-23 00:04:35] 2025-07-23 04:03:55,020 | INFO     | monitor loop #365: job 0:6742554834 is in state 'finished'
[2025-07-23 00:04:35] 2025-07-23 04:03:55,020 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-23 00:04:35] 2025-07-23 04:03:55,991 | INFO     | PID=2036503 has CPU usage=13.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2025-07-23 00:04:35] 2025-07-23 04:03:55,991 | INFO     | .. there are 32 such processes running
[2025-07-23 00:04:35] 2025-07-23 04:03:57,525 | INFO     | monitor loop #366: job 0:6742554834 is in state 'finished'
[2025-07-23 00:04:35] 2025-07-23 04:03:57,525 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-23 00:04:35] 2025-07-23 04:04:00,029 | INFO     | monitor loop #367: job 0:6742554834 is in state 'finished'
[2025-07-23 00:04:35] 2025-07-23 04:04:00,029 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-23 00:04:35] 2025-07-23 04:04:00,904 | INFO     | CPU arch script returned: x86-64-v4
[2025-07-23 00:04:35] 2025-07-23 04:04:00,908 | INFO     | found 64 cores (32 cores per socket, 2 sockets) HT, CPU MHz: 3774.210359375005
[2025-07-23 00:04:35] 2025-07-23 04:04:00,968 | INFO     | using path: /tmp/boinchome/slots/3/PanDA_Pilot-6742554834/memory_monitor_summary.json (trf name=prmon)
[2025-07-23 00:04:35] 2025-07-23 04:04:00,968 | INFO     | extracted standard info from prmon json
[2025-07-23 00:04:35] 2025-07-23 04:04:00,968 | INFO     | extracted standard memory fields from prmon json
[2025-07-23 00:04:35] 2025-07-23 04:04:00,968 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-23 00:04:35] 2025-07-23 04:04:00,968 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-23 00:04:35] 2025-07-23 04:04:00,969 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-23 00:04:35] 2025-07-23 04:04:00,969 | INFO     | fitting pss+swap vs Time
[2025-07-23 00:04:35] 2025-07-23 04:04:00,970 | INFO     | sum of square deviations: 141539398.0
[2025-07-23 00:04:35] 2025-07-23 04:04:00,970 | INFO     | sum of deviations: -3442592949.9999986
[2025-07-23 00:04:35] 2025-07-23 04:04:00,970 | INFO     | mean x: 1753240933.0
[2025-07-23 00:04:35] 2025-07-23 04:04:00,970 | INFO     | mean y: 2294129.1688311687
[2025-07-23 00:04:35] 2025-07-23 04:04:00,970 | INFO     | -- intersect: 42645508392.36091
[2025-07-23 00:04:35] 2025-07-23 04:04:00,970 | INFO     | intersect: 42645508392.36091
[2025-07-23 00:04:35] 2025-07-23 04:04:00,970 | INFO     | chi2: 0.03216256501963224
[2025-07-23 00:04:35] 2025-07-23 04:04:00,970 | INFO     | -- intersect: 42645508392.36091
[2025-07-23 00:04:35] 2025-07-23 04:04:00,970 | INFO     | current memory leak: -24.32 B/s (using 77 data points, chi2=0.03)
[2025-07-23 00:04:35] 2025-07-23 04:04:00,970 | INFO     | could have reported an average CPU frequency of 3788 MHz (6 samples)
[2025-07-23 00:04:35] 2025-07-23 04:04:00,970 | INFO     | ..............................
[2025-07-23 00:04:35] 2025-07-23 04:04:00,970 | INFO     | . Timing measurements:
[2025-07-23 00:04:35] 2025-07-23 04:04:00,971 | INFO     | . get job = 0 s
[2025-07-23 00:04:35] 2025-07-23 04:04:00,971 | INFO     | . initial setup = 3 s
[2025-07-23 00:04:35] 2025-07-23 04:04:00,971 | INFO     | . payload setup = 19 s
[2025-07-23 00:04:35] 2025-07-23 04:04:00,971 | INFO     | . stage-in = 0 s
[2025-07-23 00:04:35] 2025-07-23 04:04:00,971 | INFO     | . payload execution = 5130 s
[2025-07-23 00:04:35] 2025-07-23 04:04:00,971 | INFO     | . stage-out = 0 s
[2025-07-23 00:04:35] 2025-07-23 04:04:00,971 | INFO     | . log creation = 0 s
[2025-07-23 00:04:35] 2025-07-23 04:04:00,971 | INFO     | ..............................
[2025-07-23 00:04:35] 2025-07-23 04:04:01,018 | INFO     | 
[2025-07-23 00:04:35] 2025-07-23 04:04:01,019 | INFO     | job summary report
[2025-07-23 00:04:35] 2025-07-23 04:04:01,019 | INFO     | --------------------------------------------------
[2025-07-23 00:04:35] 2025-07-23 04:04:01,019 | INFO     | PanDA job id: 6742554834
[2025-07-23 00:04:35] 2025-07-23 04:04:01,019 | INFO     | task id: 45697541
[2025-07-23 00:04:35] 2025-07-23 04:04:01,019 | INFO     | errors: (none)
[2025-07-23 00:04:35] 2025-07-23 04:04:01,019 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-23 00:04:35] 2025-07-23 04:04:01,019 | INFO     | pilot state: finished 
[2025-07-23 00:04:35] 2025-07-23 04:04:01,019 | INFO     | transexitcode: 0
[2025-07-23 00:04:35] 2025-07-23 04:04:01,019 | INFO     | exeerrorcode: 0
[2025-07-23 00:04:35] 2025-07-23 04:04:01,019 | INFO     | exeerrordiag: 
[2025-07-23 00:04:35] 2025-07-23 04:04:01,019 | INFO     | exitcode: 0
[2025-07-23 00:04:35] 2025-07-23 04:04:01,019 | INFO     | exitmsg: OK
[2025-07-23 00:04:35] 2025-07-23 04:04:01,019 | INFO     | cpuconsumptiontime: 34845 s
[2025-07-23 00:04:35] 2025-07-23 04:04:01,019 | INFO     | nevents: 400
[2025-07-23 00:04:35] 2025-07-23 04:04:01,019 | INFO     | neventsw: 0
[2025-07-23 00:04:35] 2025-07-23 04:04:01,019 | INFO     | pid: 2075683
[2025-07-23 00:04:35] 2025-07-23 04:04:01,019 | INFO     | pgrp: 2075683
[2025-07-23 00:04:35] 2025-07-23 04:04:01,019 | INFO     | corecount: 8
[2025-07-23 00:04:35] 2025-07-23 04:04:01,019 | INFO     | event service: False
[2025-07-23 00:04:35] 2025-07-23 04:04:01,019 | INFO     | sizes: {0: 2397335, 1: 2397534, 11: 2397534, 14: 2397824, 22: 2397852, 5153: 2424363, 5154: 2424490, 5155: 2433544, 5159: 2433600, 5165: 2433794}
[2025-07-23 00:04:35] 2025-07-23 04:04:01,019 | INFO     | --------------------------------------------------
[2025-07-23 00:04:35] 2025-07-23 04:04:01,019 | INFO     | 
[2025-07-23 00:04:35] 2025-07-23 04:04:01,019 | INFO     | executing command: ls -lF /tmp/boinchome/slots/3
[2025-07-23 00:04:35] 2025-07-23 04:04:01,049 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-23 00:04:35] 2025-07-23 04:04:01,049 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-23 00:04:35] 2025-07-23 04:04:01,049 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-23 00:04:35] 2025-07-23 04:04:01,049 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-23 00:04:35] 2025-07-23 04:04:01,049 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-23 00:04:35] 2025-07-23 04:04:01,049 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-23 00:04:35] 2025-07-23 04:04:01,049 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-23 00:04:35] 2025-07-23 04:04:01,049 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-23 00:04:35] 2025-07-23 04:04:01,049 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-23 00:04:35] 2025-07-23 04:04:01,049 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-23 00:04:35] 2025-07-23 04:04:01,049 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-23 00:04:35] 2025-07-23 04:04:01,049 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-23 00:04:35] 2025-07-23 04:04:01,049 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-23 00:04:35] 2025-07-23 04:04:01,049 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-23 00:04:35] 2025-07-23 04:04:01,049 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-23 00:04:35] 2025-07-23 04:04:01,049 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-23 00:04:35] 2025-07-23 04:04:01,049 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-23 00:04:35] 2025-07-23 04:04:01,050 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-23 00:04:35] 2025-07-23 04:04:01,050 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-23 00:04:35] 2025-07-23 04:04:01,050 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-23 00:04:35] 2025-07-23 04:04:01,050 | INFO     | job 6742554834 has completed (purged errors)
[2025-07-23 00:04:35] 2025-07-23 04:04:01,050 | INFO     | overall cleanup function is called
[2025-07-23 00:04:35] 2025-07-23 04:04:02,073 | INFO     | --- collectZombieJob: --- 10, [2075683]
[2025-07-23 00:04:35] 2025-07-23 04:04:02,074 | INFO     | zombie collector waiting for pid 2075683
[2025-07-23 00:04:35] 2025-07-23 04:04:02,074 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-23 00:04:35] 2025-07-23 04:04:02,074 | INFO     | collected zombie processes
[2025-07-23 00:04:35] 2025-07-23 04:04:02,074 | INFO     | will attempt to kill all subprocesses of pid=2075683
[2025-07-23 00:04:35] 2025-07-23 04:04:02,605 | INFO     | process IDs to be killed: [2075683] (in reverse order)
[2025-07-23 00:04:35] 2025-07-23 04:04:02,759 | WARNING  | found no corresponding commands to process id(s)
[2025-07-23 00:04:35] 2025-07-23 04:04:02,759 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-23 00:04:35] 2025-07-23 04:04:02,782 | INFO     | did not find any defunct processes belonging to 2075683
[2025-07-23 00:04:35] 2025-07-23 04:04:02,807 | INFO     | did not find any defunct processes belonging to 2075683
[2025-07-23 00:04:35] 2025-07-23 04:04:02,807 | INFO     | ready for new job
[2025-07-23 00:04:35] 2025-07-23 04:04:02,807 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-23 00:04:35] 2025-07-23 04:04:02,808 | INFO     | ***************************************
[2025-07-23 00:04:35] 2025-07-23 04:04:02,808 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-23 00:04:35] 2025-07-23 04:04:02,808 | INFO     | ***************************************
[2025-07-23 00:04:35] 2025-07-23 04:04:02,808 | INFO     | 
[2025-07-23 00:04:35] 2025-07-23 04:04:02,825 | INFO     | architecture information:
[2025-07-23 00:04:35] 2025-07-23 04:04:02,826 | INFO     | executing command: cat /etc/os-release
[2025-07-23 00:04:35] 2025-07-23 04:04:02,841 | INFO     | cat /etc/os-release:
[2025-07-23 00:04:35] NAME="CentOS Linux"
[2025-07-23 00:04:35] VERSION="7 (Core)"
[2025-07-23 00:04:35] ID="centos"
[2025-07-23 00:04:35] ID_LIKE="rhel fedora"
[2025-07-23 00:04:35] VERSION_ID="7"
[2025-07-23 00:04:35] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-23 00:04:35] ANSI_COLOR="0;31"
[2025-07-23 00:04:35] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-23 00:04:35] HOME_URL="https://www.centos.org/"
[2025-07-23 00:04:35] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-23 00:04:35] 
[2025-07-23 00:04:35] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-23 00:04:35] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-23 00:04:35] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-23 00:04:35] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-23 00:04:35] 
[2025-07-23 00:04:35] 2025-07-23 04:04:02,842 | INFO     | ***************************************
[2025-07-23 00:04:35] 2025-07-23 04:04:03,348 | INFO     | executing command: df -mP /tmp/boinchome/slots/3
[2025-07-23 00:04:35] 2025-07-23 04:04:03,366 | INFO     | sufficient remaining disk space (170691395584 B)
[2025-07-23 00:04:35] 2025-07-23 04:04:03,367 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-23 00:04:35] 2025-07-23 04:04:03,367 | INFO     | current server update state: UPDATING_FINAL
[2025-07-23 00:04:35] 2025-07-23 04:04:03,367 | INFO     | update_server=False
[2025-07-23 00:04:35] 2025-07-23 04:04:03,367 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-23 00:04:35] 2025-07-23 04:04:03,539 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-23 00:04:35] 2025-07-23 04:04:03,539 | INFO     | aborting loop
[2025-07-23 00:04:35] 2025-07-23 04:04:04,128 | INFO     | all data control threads have been joined
[2025-07-23 00:04:35] 2025-07-23 04:04:04,374 | INFO     | [job] retrieve thread has finished
[2025-07-23 00:04:35] 2025-07-23 04:04:04,425 | INFO     | all job control threads have been joined
[2025-07-23 00:04:35] 2025-07-23 04:04:04,454 | INFO     | all payload control threads have been joined
[2025-07-23 00:04:35] 2025-07-23 04:04:04,463 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-23 00:04:35] 2025-07-23 04:04:04,545 | INFO     | [job] job monitor thread has finished
[2025-07-23 00:04:35] 2025-07-23 04:04:04,565 | INFO     | [payload] validate_pre thread has finished
[2025-07-23 00:04:35] 2025-07-23 04:04:04,626 | INFO     | [job] create_data_payload thread has finished
[2025-07-23 00:04:35] 2025-07-23 04:04:04,875 | INFO     | [data] copytool_in thread has finished
[2025-07-23 00:04:35] 2025-07-23 04:04:04,936 | INFO     | [payload] validate_post thread has finished
[2025-07-23 00:04:35] 2025-07-23 04:04:04,993 | INFO     | [payload] failed_post thread has finished
[2025-07-23 00:04:35] 2025-07-23 04:04:04,993 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-23 00:04:35] 2025-07-23 04:04:05,134 | INFO     | [data] control thread has finished
[2025-07-23 00:04:35] 2025-07-23 04:04:05,158 | INFO     | [job] validate thread has finished
[2025-07-23 00:04:35] 2025-07-23 04:04:05,228 | INFO     | [payload] execute_payloads thread has finished
[2025-07-23 00:04:35] 2025-07-23 04:04:05,431 | INFO     | [job] control thread has finished
[2025-07-23 00:04:35] 2025-07-23 04:04:05,461 | INFO     | [payload] control thread has finished
[2025-07-23 00:04:35] 2025-07-23 04:04:06,033 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-23 00:04:35] 2025-07-23 04:04:06,470 | INFO     | [data] copytool_out thread has finished
[2025-07-23 00:04:35] 2025-07-23 04:04:07,040 | INFO     | [job] queue monitor thread has finished
[2025-07-23 00:04:35] 2025-07-23 04:04:09,001 | INFO     | [data] queue_monitor thread has finished
[2025-07-23 00:04:35] 2025-07-23 04:04:13,748 | INFO     | job.realtimelogging is not enabled
[2025-07-23 00:04:35] 2025-07-23 04:04:14,754 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-23 00:04:35] 2025-07-23 04:04:15,362 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139683977680704)>', '<ExcThread(monitor, started 139683250030336)>']
[2025-07-23 00:04:35] 2025-07-23 04:04:20,388 | INFO     | all workflow threads have been joined
[2025-07-23 00:04:35] 2025-07-23 04:04:20,388 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-23 00:04:35] 2025-07-23 04:04:20,388 | INFO     | traces error code: 0
[2025-07-23 00:04:35] 2025-07-23 04:04:20,388 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-23 00:04:35] 2025-07-23 04:04:34,648 | INFO     | PID=2036503 has CPU usage=2.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-07-23 00:04:35] 2025-07-23 04:04:34,649 | INFO     | .. there are 34 such processes running
[2025-07-23 00:04:35] 2025-07-23 04:04:34,649 | INFO     | found 0 job(s) in 20 queues
[2025-07-23 00:04:35] 2025-07-23 04:04:34,649 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-23 00:04:35] 2025-07-23 04:04:34,649 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-23 00:04:35] 2025-07-23 04:04:34,649 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-23 00:04:35] 2025-07-23 04:04:34,650 | INFO     | [monitor] control thread has ended
[2025-07-23 00:04:35] 2025-07-23 04:04:34,771 [wrapper] ==== pilot stdout END ====
[2025-07-23 00:04:35] 2025-07-23 04:04:34,774 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-23 00:04:35] 2025-07-23 04:04:34,777 [wrapper] pilotpid: 2036503
[2025-07-23 00:04:35] 2025-07-23 04:04:34,779 [wrapper] Pilot exit status: 0
[2025-07-23 00:04:35] 2025-07-23 04:04:34,815 [wrapper] pandaids: 6742554834
[2025-07-23 00:04:35] 2025-07-23 04:04:34,930 [wrapper] cleanup supervisor_pilot 3416183 2036504
[2025-07-23 00:04:35] 2025-07-23 04:04:34,933 [wrapper] Test setup, not cleaning
[2025-07-23 00:04:35] 2025-07-23 04:04:34,936 [wrapper] apfmon messages muted
[2025-07-23 00:04:35] 2025-07-23 04:04:34,940 [wrapper] ==== wrapper stdout END ====
[2025-07-23 00:04:35] 2025-07-23 04:04:34,943 [wrapper] ==== wrapper stderr END ====
[2025-07-23 00:04:35]  *** Error codes and diagnostics ***
[2025-07-23 00:04:35]     "exeErrorCode": 0,
[2025-07-23 00:04:35]     "exeErrorDiag": "",
[2025-07-23 00:04:35]     "pilotErrorCode": 0,
[2025-07-23 00:04:35]     "pilotErrorDiag": "",
[2025-07-23 00:04:35]  *** Listing of results directory ***
[2025-07-23 00:04:35] total 641584
[2025-07-23 00:04:35] -rw-r--r--. 1 boincer umatlas    530466 Jul 22 14:15 pilot3.tar.gz
[2025-07-23 00:04:35] -rw-r--r--. 1 boincer umatlas      5112 Jul 22 14:50 queuedata.json
[2025-07-23 00:04:35] -rwx------. 1 boincer umatlas     36292 Jul 22 14:53 runpilot2-wrapper.sh
[2025-07-23 00:04:35] -rw-r--r--. 1 boincer umatlas       100 Jul 22 22:36 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-23 00:04:35] -rwxr-xr-x. 1 boincer umatlas      7986 Jul 22 22:36 run_atlas
[2025-07-23 00:04:35] -rw-r--r--. 1 boincer umatlas       105 Jul 22 22:36 job.xml
[2025-07-23 00:04:35] -rw-r--r--. 2 boincer umatlas 346928979 Jul 22 22:36 EVNT.45697539._000090.pool.root.1
[2025-07-23 00:04:35] -rw-r--r--. 2 boincer umatlas     15095 Jul 22 22:36 start_atlas.sh
[2025-07-23 00:04:35] drwxrwx--x. 2 boincer umatlas      4096 Jul 22 22:36 shared
[2025-07-23 00:04:35] -rw-r--r--. 2 boincer umatlas    542903 Jul 22 22:36 input.tar.gz
[2025-07-23 00:04:35] -rw-r--r--. 1 boincer umatlas         0 Jul 22 22:36 boinc_lockfile
[2025-07-23 00:04:35] -rw-r--r--. 1 boincer umatlas      2593 Jul 22 22:36 pandaJob.out
[2025-07-23 00:04:35] -rw-------. 1 boincer umatlas    977736 Jul 22 22:37 agis_schedconf.cvmfs.json
[2025-07-23 00:04:35] -rw-------. 1 boincer umatlas   1593031 Jul 22 22:37 agis_ddmendpoints.agis.ALL.json
[2025-07-23 00:04:35] drwx------. 4 boincer umatlas      4096 Jul 22 22:37 pilot3
[2025-07-23 00:04:35] -rw-r--r--. 1 boincer umatlas      7161 Jul 23 00:01 init_data.xml
[2025-07-23 00:04:35] -rw-r--r--. 1 boincer umatlas       531 Jul 23 00:03 boinc_task_state.xml
[2025-07-23 00:04:35] -rw-------. 1 boincer umatlas 304580865 Jul 23 00:03 HITS.45697541._003073.pool.root.1
[2025-07-23 00:04:35] -rw-------. 1 boincer umatlas        95 Jul 23 00:03 pilot_heartbeat.json
[2025-07-23 00:04:35] -rw-------. 1 boincer umatlas      1048 Jul 23 00:03 memory_monitor_summary.json
[2025-07-23 00:04:35] -rw-------. 1 boincer umatlas    306140 Jul 23 00:03 log.45697541._003073.job.log.tgz.1
[2025-07-23 00:04:35] -rw-------. 1 boincer umatlas      7789 Jul 23 00:04 heartbeat.json
[2025-07-23 00:04:35] -rw-r--r--. 1 boincer umatlas      8192 Jul 23 00:04 boinc_mmap_file
[2025-07-23 00:04:35] -rw-r--r--. 1 boincer umatlas        27 Jul 23 00:04 wrapper_checkpoint.txt
[2025-07-23 00:04:35] -rw-------. 1 boincer umatlas       823 Jul 23 00:04 pilotlog.txt
[2025-07-23 00:04:35] -rw-------. 1 boincer umatlas    496294 Jul 23 00:04 log.45697541._003073.job.log.1
[2025-07-23 00:04:35] -rw-------. 1 boincer umatlas       357 Jul 23 00:04 output.list
[2025-07-23 00:04:35] -rw-r--r--. 1 boincer umatlas       620 Jul 23 00:04 runtime_log
[2025-07-23 00:04:35] -rw-------. 1 boincer umatlas    819200 Jul 23 00:04 result.tar.gz
[2025-07-23 00:04:35] -rw-r--r--. 1 boincer umatlas      8650 Jul 23 00:04 runtime_log.err
[2025-07-23 00:04:35] -rw-------. 1 boincer umatlas       654 Jul 23 00:04 401LDmXIXy7n9Rq4apOajLDm4fhM0noT9bVof3QYDmeLvKDmESksUn.diag
[2025-07-23 00:04:35] -rw-r--r--. 1 boincer umatlas     22275 Jul 23 00:04 stderr.txt
[2025-07-23 00:04:35] HITS file was successfully produced:
[2025-07-23 00:04:35] -rw-------. 1 boincer umatlas 304580865 Jul 23 00:03 shared/HITS.pool.root.1
[2025-07-23 00:04:35]  *** Contents of shared directory: ***
[2025-07-23 00:04:35] total 637596
[2025-07-23 00:04:35] -rw-r--r--. 2 boincer umatlas 346928979 Jul 22 22:36 ATLAS.root_0
[2025-07-23 00:04:35] -rw-r--r--. 2 boincer umatlas     15095 Jul 22 22:36 start_atlas.sh
[2025-07-23 00:04:35] -rw-r--r--. 2 boincer umatlas    542903 Jul 22 22:36 input.tar.gz
[2025-07-23 00:04:35] -rw-------. 1 boincer umatlas 304580865 Jul 23 00:03 HITS.pool.root.1
[2025-07-23 00:04:35] -rw-------. 1 boincer umatlas    819200 Jul 23 00:04 result.tar.gz
00:04:36 (2021254): run_atlas exited; CPU time 34946.736357
00:04:36 (2021254): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN